TCONS_00059898 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059898
Unique NameTCONS_00059898
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059898 ID=TCONS_00059898|Name=TCONS_00059898|organism=Clytia hemisphaerica|type=transcript|length=3310bp
GTGTATTTGAGTCGCCGATGAGGTAAAGCTTTGGAAAATCTTTCACTCCA
CCACAACcagccattttgaaaataaatttttgatttttttcatcagcGCG
CGCTTTATCACGTGGGGAGAAAACGATTGTGCATAGGAAACCCCATTGGA
CTTCGAACTAAAAGGAAGTCCCATTATCAGCGTCAAAACACAATCCAAGA
TGGTCGATTTTTTCTGTCTGCAAAACTTGCACAATTTTTGAAGGATTTAG
AGAAGGTTCCTTGTtgtattttcaaataatctaaCAATGGAATTGATGTT
TTGAAATGTTAAGGCTCGCTAATCTGTTTAAATGTAAGTGTAATCATAAA
TCAATAAGATTATATCGGCGAACTGTGTTCTTTGGCGTTAAAGACGATAA
ACTTGTCATGGCTTCATCATCCAAAAAAGATTCTGCTGAAGATGCTGCTG
CCAGAAAAAGAAATGCTGGAATTATAATCATTGGAGATGAGATACTGAAA
GGACATACCAAAGACTTAAATGCATCCTTTCTTTTGTCAAAATTATGGAC
AAATGGGGTCAATGTCAAGAAAGTCTCCTTTGTTGCTGATGATGTTCAAG
AGATCGCCAGTgaagtgaaaatattttcagacaaTTATTCCTTTGTAATT
ACATGTGGCGGGATAGGACCCACACATGATGATACAACATTTGAGGCAGT
CTCAAAAGCTTTCAATGAGCCACTTGTTGTAAATAATGATCTTGTTACAA
AAATTAAGCTTCTGACATCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAA
ATGGCAACACTTCCTGAATCTACCAAACTTATAACAGGACAAGATCCAAT
AACTGGGACATCAGTAAAATATCCTTTGATGAATGTACATAATGTATTCA
TTTTTCCTGGAGTTCCTGAATTCATGCAAAAATCTTTTACAGTGAACCAG
TATCTATTTTCGGCAGAAAACAAATTCtatctaatgaaaatctacaTCTC
TGTAAATGAAGACGAAATATCagctaaaataaaaaaggttGATGATGCAT
TCCCTGATGTTAGTATTGGGTCTTATCCGATGTTGAATGATATTTACAAA
GTAAAGCTGACATTAGAATCTGAAAATCAAGAAAGTTTGAACAGTGCATT
TGATTTGCTCATGAAAGAACTACCCTCTCAAATCATTGTGTCAGTCAAGA
AGTGTGAACCAAATTCACGAGAAGACCACCATGAATTGATCAATACAAGC
AAAGAATGTCAACAAAGATCAAGACTGTATTCATCAACACagtTAAACTC
CCTATCAGTGGTCGATATGGAGCATTATCTCGATACAAGCAATACAACAT
CTCTTGCATCTGCTTTGAAGTCTGCATATGCTGTATTCAATCAAACCATT
CAAATGTACTCCTTAGATGAAATATGTATTGGATTCAATGGTGGTAAGGA
CTGCACTGCCGTTCTGCATTTATACGTTGCATTTATCAAGAAATTCTACC
CAGATAATACTAAAAGGATTACTGGGCTTTATTTAAAGAATGCTAACCCG
TTTAAAGAAGCtcaagattttattaaaaactgTGAAGCGAATTATAATAT
TGATATGATTGTTATTCCGGCTAGTATTAAAGAAGGcttggaaaatttga
aagaatcgCACCCGAAGATTAAAGCTGTGATCATGGGGACACGTCGCCAC
GATCCTTACTCATCGCAACTGAAATCGTTTACAATGACCGATGTTAGCTG
GCCTAGTTACATGCGAGTATTCCCGATCCTAGATTGGTCGTATGCCGAAG
TATGGGATTTTTTGAGAACTTTTGATTTACCTTACTGTCGTTTGTATGAT
GAAGGATATACTTCTTTGGGTGACCCTAACAATACACTTAAGAACCAAAG
TTTATTATTGAAAGATGGTAGATACTCACCTGCGTACATGTTGCAAGAAG
AAAGCTTGGAACGCGAAGGACGAAATAAATGATGGCGACTTTCTTCAAAG
AAACATTTTATCAAACACCTTGCTTATCCTTATCAAACACCAAACACCTC
AAGGGGATTGGGTTCAAGTTAACAAGGGTTGATTGACGTTATGTATCAAA
TGTTAGAGATGTTAATGTAATAAATTCAGACACTTGACGTCTGTTAACTC
TGGTGAACTTGAAACTTTCATCTAGTTAGGGGCAAGAGTTGATAGATGTA
AACAATGTATTCGACGTCCGAATAACAATTAACCATTTCAGTCCCAGAGA
CCCACAGAGCGAGTTCCTTCGGGGCCAAACTTAACCGGGCTATATCTCCA
GAGCTAAAAGATTCCCGGAACTTTCGTAGCTACCATCGGaaaaagcatga
aattctgaaGACAGCAGGTTGGTTTTGAGGCGCCCTTACCTCTTAACCGA
CGGTGCGAAACTTTTGAATTCCATTCAAAAAGTGCAAAGGTCTAAGACTG
AAAGGGTTACGACGTGTGTTTGAGCTGGACTaataaatgttaaaaaattc
aTATCACCGCAATCGATAATGACTCTCCTTGAAAAATAATCTCTCTATTT
CGATAGCTAAAGTTAGTTAGATCTGCTCGATTTCAACGAAGAAGCCACTG
TATGTACAATGACCACCACCTGCCCCACGCTTTTGTTTTGATGCGTTCTC
TACATTCTACTAAacgacccgggggggggggcactcaaggttaATGAGGT
GCGGCTCTTAATGGTATATTTTCCTTCCCAAAGTGCATTGTAAGAGTCAA
AATCAGCAAACGATCTTTGCCCTAAAAATCCATTCGCTTTGAATTTTCAC
TCTTTTTTTATCTATGTGGAAACCATATCAGCGAAATTCGATTTATTCCC
TCACATGTAAAGTAAATGCACTTTGGTTCATATACCTTATATTATAGCCC
TTGATAGCCGTTGATATGAAAACCTTCTTAAAGGTCTGTTTATACTGTGG
CATCTCGAATGAGACTCTAATTATGTCTGTGTTTAACTGTTTATTGATTT
ATTAAGTTAGTATTTTCTTGTACTTTTGCATTAACAACGTATGGATATTA
ATAGAGAGgtgtattttatatttttacatttttacgctgatgatattttc
aaatttttagattctgtattttcattgattttcatcattttttttatcta
gTGGTAGATTATGTTATTATTTACATGAGTGATACACCTTTATTAAATTG
ATCGGTTTTCATGATCTCGTACTAAAATTTatcttatatttttttgaaca
ttttcataAGGTCTTTGGCATCTTACTCGAATTCTTTGAACAAAAGTATT
CAAATGTCAC
Run BLAST on NCBI

protein sequence of TCONS_00059898-protein

>TCONS_00059898-protein ID=TCONS_00059898-protein|Name=TCONS_00059898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MLRLANLFKCKCNHKSIRLYRRTVFFGVKDDKLVMASSSKKDSAEDAAAR
KRNAGIIIIGDEILKGHTKDLNASFLLSKLWTNGVNVKKVSFVADDVQEI
ASEVKIFSDNYSFVITCGGIGPTHDDTTFEAVSKAFNEPLVVNNDLVTKI
KLLTSKEDLSPGLLKMATLPESTKLITGQDPITGTSVKYPLMNVHNVFIF
PGVPEFMQKSFTVNQYLFSAENKFYLMKIYISVNEDEISAKIKKVDDAFP
DVSIGSYPMLNDIYKVKLTLESENQESLNSAFDLLMKELPSQIIVSVKKC
EPNSREDHHELINTSKECQQRSRLYSSTQLNSLSVVDMEHYLDTSNTTSL
ASALKSAYAVFNQTIQMYSLDEICIGFNGGKDCTAVLHLYVAFIKKFYPD
NTKRITGLYLKNANPFKEAQDFIKNCEANYNIDMIVIPASIKEGLENLKE
SHPKIKAVIMGTRRHDPYSSQLKSFTMTDVSWPSYMRVFPILDWSYAEVW
DFLRTFDLPYCRLYDEGYTSLGDPNNTLKNQSLLLKDGRYSPAYMLQEES
LEREGRNK
Run BLAST on NCBI

transcript from alignment at scaffold_331:567092..574038-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059898 ID=TCONS_00059898|Name=TCONS_00059898|organism=Clytia hemisphaerica|type=transcript|length=6947bp|location=Sequence derived from alignment at scaffold_331:567092..574038- (Clytia hemisphaerica)
GTGTATTTGAGTCGCCGATGAGGTAAAGCTTTGGAAAATCTTTCACTCCA
CCACAACCAGCCATTTTGAAAATAAATTTTTGATTTTTTTCATCAGCGCG
CGCTTTATCACGTGGGGAGAAAACGATTGTGCATAGGAAACCCCATTGGA
CTTCGAACTAAAAGGAAGTCCCATTATCAGCGTCAAAACACAATCCAAGA
TGGTCGATTTTTTCTGTCTGCAAAACTTGCACAATTTTTGAAGGATTTAG
AGAAGGTTCCTTGTTGTATTTTCAAATAATCTAACAATGGAATTGATGTT
TTGAAATGTTAAGGCTCGCTAATCTGTTTAAATGTAAGTGTAATCATAAA
TCAATAAGATTATATCGGCGAACTGTGTTCTTTGGCGTTAAAGACGATAA
ACTTGTCATGGCTTCATCATCCAAAAAAGATTCTGCTGAAGATGCTGCTG
CCAGAAAAAGAAATGCTGGAATTATAATCATTGGAGATGAGATACTGAAA
GGACATACCAAAGACTTAAATGCATCCTTTCTTTTGTCAAAATTATGGAC
AAATGGGGTCAATGTCAAGAAAGTCTCCTTTGTTGCTGATGATGTTCAAG
AGATCGCCAGTGAAGTGAAAATATTTTCAGACAATTATTCCTTTGTAATT
ACATGTGGCGGGATAGGACCCACACATGATGATACAACATTTGAGGCAGT
CTCAAAAGCTTTCAATGAGCCACTTGTTGTAAATAATGATCTTGTTACAA
AAATTAAGCTTCTGACATCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAA
ATGGCAACACTTCCTGAATCTACCAAACTTATAACAGGACAAGATCCAAT
AACTGGGACATCAGTAAAATATCCTTTGATGAATGTACATAATGTATTCA
TTTTTCCTGGAGTTCCTGAATTCATGCAAAAATCTTTTACAGTGAACCAG
TATCTATTTTCGGCAGAAAACAAATTCTATCTAATGAAAATCTACATCTC
TGTAAATGAAGACGAAATATCAGCTAAAATAAAAAAGGTTGATGATGCAT
TCCCTGATGTTAGTATTGGGTCTTATCCGATGTTGAATGATATTTACAAA
GTAAAGCTGACATTAGAATCTGAAAATCAAGAAAGTTTGAACAGTGCATT
TGATTTGCTCATGAAAGAACTACCCTCTCAAATCATTGTGTCAGTCAAGA
AGTGTGAACCAAATTCACGAGAAGACCACCATGAATTGATCAATACAAGC
AAAGAATGTCAACAAAGATCAAGACTGTATTCATCAACACAGTGTAAGTG
TTTATTTTATAAATCAGAAATTGCACCATCTTTGATCTTGGTTCTTTGAC
CACAGTTGAGACAAAAATTATTTGGACAAAGATCCTTACAAGACTTTACT
TGAAAGTGAGTAACTCACTTTTGATTCCTTTTGATTCAAGACCTATAGTC
CATAGACTCCTTTTGGGTAGGTATGACTAATTCAAAAATTTCATTTTTCA
TCTGTTAGGGTAAATTTTGTCCTACTGTAAGTATTTTTCCTCAAGTAGAA
AATAATGGTTCTCTTTTTGGTGACTTTCCTAAATCAATCAAACTTTTAAT
AAACATCTGGTACATAATGGATGTACAGTTATGGGAAAGTGTTAAAAGTT
TAGTCTCCGCTACCAAGGTTTCAAAAGATGGCTTAGGAATCCTGCAATAT
TCTTAATTATTCTTCTAATCCTTAAATTCTAGGTTGATTTGATTAGCTAA
TTTCGATTCGGAGAAAACTCTTGGTTCTAGAATGAAAGTAAAATGAGAAA
TTACAGTAGTCCACTTTTAAAAACAATGTAACATTCTGAATAATAGTTTC
TTTACAGGTATATAATGTTTGCATAATGATATTATTTCAAAAAATATTTT
CCAGATGCTTGCATCCCCTTTTTAATGTTGTTCAAGGAAGTTTAGATTTT
TTGTATTGGAATGTCTTATCCGATTGTTTCGCTTTTATAATTCATCTTTG
GAAGTTCAAAGTACATATATTATTTCAATAGTATGCAGTATTGTATTAGA
ACTTATTACTACTAGTTATTGGCTTGTCAGAAAATGCCCACTAGTCTTTT
ATTGTGACTTTTGACAGCGTCAAAAACTAATTCAATTAGTACAACACAAA
GAATGTATATATATAACTTATGAAACCTAAGCAAGCAAATCTCCTTTTGA
TAAAAAGTCCAAAGTTTGAATTTTCTCTCATAAAGCAATTCTCACACTGT
TCCACATCAGAAGCCTCTCGTGTTTTAGTATAATTTGCAAAATCTAAACA
TGAAAGAAAAACTTTGGAATCATTATAAAGGTATGACTTTTGTTTATATT
TAATACTTTTGGATGCATTACATGTTTATGTTTTGTTTGTGCATGAGTTA
TAATGATCTTGAGAGATCCCCTTTATTTCTCAATGTTCCCTTCTCTACGA
CGATTGCTTAAATGGTTGTAGGAGAACTTGAGATCATATCATGACATTCT
TAAAGAATACAGGGCTTTATGGATCATATAATAATAACAATGCTCTATGA
GTAAACACGGCAAGATAGAAACAGAGAATGCAATGTGATCACTTTGTGAT
TTTTGATAATCGATAGGTAAAGGTAATTAGTAAGACAGTACACCCCTGTC
TCACAGACCCACTGGTAGTAAAATTTTACTGGAACTTTTTTCCTCAGTGG
GGATAAACATTCCTATTGAATTCCCAATGGGGATAAAAATTCTATTGTTC
CAAGGTAAAAAGATCCAGTGGGGATGGTTTTGGAGTACAATTTTTAAGCA
TAGAATTTCGAGTGGGGATGAAATCAAAGTCATTTTCCCAGTGGGGCTGA
AATTCCCACCGGGGAAATTTTCCAGTGGGACTGGGGTCCCAGTGGGTCTG
TGATACAGGGGTGTATTAAGTTAGTAAGACTAGTCAAAAGCTAAGAGATT
TCTAGTTTTCTAGCCGAAACCTAAGACTATATTATTGGGCATTTCAGTAG
ACAGAAATTTTTCAGTCAGGTATTTATACTCGAGTAATACAAACTTAAGA
AAAGTCGTTGAGTATATAATATATATTGGAGGTTTCAATTTTGTGTCGTA
TAAGCATAAAATTGCGTTGATTTTTAACATTAATGCTCCAAAACGATTAA
GGTATCATTAAAGATTGCAACAATTATGCTATTTAAGTCTGCTATTTATC
TTTTTTTCGATTGATAATTAAATGGTCGACTCATTAGACTTCCTCTTACA
TAATTAGTGAAGCTGACTTTTTGTTCCTTTTGGATTTAGAGCCCTATACA
TTTTACCATAAGAAGCCATCTTGCCTCAAGGCAATTTTTGCTTTGTTTGG
ATGATTTTTTATTTGGAAAATGGTATTTGAAACTGTATTTTTGAAGTCTA
TTTGAAAATTCCAGCTTAACTATGTACTCTCGGGTACCTTATAGCTGTTC
CCCCCTGCTAATTAGTTTTTGGGAAAATGCTTTTGAAAGTTCCCCTCTTT
TGTCCTAATTCTGCTGTATTAGCCTCCTTTTCAAAAATTTTCCACCCAGG
TAATTTTTATTCCAATCCCCCCTTATTAAGTTTTGAGATTTTTTCCAATC
CCTTGCGTTTACTGAACTGTTCGATAATACTACAACGACTTCTTCTAATA
GAGGTTTAATGAGGTCTTTCAATTCAAGTTAATTATATCTCGACTTCTTT
TCTGTCCGTTTGTTTATCACCGTTGTTTGGCTTATTATAATGTTTACTAT
ACATCTGAATACATATGTTGGTGTTTTTTTAGAACGTACTAAATTGTGTT
TTGGGTATCTCCTGTTTAAGACAACTTTTTCTTAATGAAAACCTTTACAT
GAGTATTTCAATTTATTTTGAGAAAAAGAGATAGGATGAAATATTCCGAT
TTTTTTGGTCCGGCTTTAATTGGATAAGTTAAACAGCTACAATTTAAGGA
CAAAATTAGGAGTAATCTAGGATGAGAGCTTTCTTCTGTGCGAATGGATG
AAAAATTTCCCCAGTTAATTACTCCATATATAAAAGATTTTGTCTTGAAA
TTATACTCTTAAATGTAAATTATTAGAAAACGTAAGCTAAATGATGAAAG
GGGTAGAAAAGGATAAAAAAATATTGATAAAAAACGCGCTGTCCAAAAGA
ATGTTTTAAAAACTGATGGATATTATTTTGAGGATGAAAATTATATAGCC
TATAGTCCTATATAAGTGTAATAGTAAAGAATGTATCTTTCAGAAAATAG
CAATATAAAACAAGGTAAATCCTTTTGTGAGTAATTTTGTCTATTTACTT
GAGAAATGGTTTTTTAGACTCAGCAAGCCTTAAGATGTTTTTAAGTTGTT
CTTTATATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTA
TAAAAGAACGTCTACCTTAAGGGAAGAAATTTTTCCGCGAAATGAATAAA
AACCACCTTGGACGATATTCACTTAAATTTTTATCCCTAAAAAATTCAAG
AAAATCCTTCATTCGCGAATTTTTTCCGCGAAATACGCAATTTTCGCAAC
CTTAATTCGCGAAAATATCTTCCGCGAAAATTTCTTCCCTTAAGGTATCA
TTGTTAAGGCTTTGGATGAACTTTGAAACTATGCGTTTGCTGGGTAAGAA
CACTTCACATATTAGCACATGCATAATTAAAGGTTTATTTTTACATAAGT
GATTCCGTTTCATATTAGACACGTGATTCATATCAGTGTATGTCTATTGT
TATTATGCTGATATAAGCAAAATGTCTTTCTTTTCCTCTTTCTGACCAAT
CTTCCTCCACATCCTTATTAATCCAATGTGAAAAGCTTGTAATCCTTAAA
ATTGATGAGTAAGCAAACAATTCGCTCTCATGTAAAAACAAAACCTTTAA
TCTACTCCATTCTTTCTCTTTTCTTTACAGTAAACTCCCTATCAGTGGTC
GATATGGAGCATTATCTCGATACAAGCAATACAACATCTCTTGCATCTGC
TTTGAAGTCTGCATATGCTGTATTCAATCAAACCATTCAAATGTACTCCT
TAGATGAAATATGTATTGGATTCAATGGTGGTAAGGACTGCACTGCCGTT
CTGCATTTATACGTTGCATTTATCAAGAAATTCTACCCAGATAATACTAA
AAGGATTACTGGGCTTTATTTAAAGAATGCTAACCCGTTTAAAGAAGCTC
AAGATTTTATTAAAAACTGTGAAGCGAATTATAATATTGATATGATTGTT
ATTCCGGCTAGTATTAAAGAAGGCTTGGAAAATTTGAAAGAATCGCACCC
GAAGATTAAAGCTGTGATCATGGGGACACGTCGCCACGATCCTTACTCAT
CGCAACTGAAATCGTTTACAATGACCGATGTTAGCTGGCCTAGTTACATG
CGAGTATTCCCGATCCTAGATTGGTCGTATGCCGAAGTATGGGATTTTTT
GAGAACTTTTGATTTACCTTACTGTCGTTTGTATGATGAAGGATATACTT
CTTTGGGTGACCCTAACAATACACTTAAGAACCAAAGTTTATTATTGAAA
GATGGTAGATACTCACCTGCGTACATGTTGCAAGAAGAAAGCTTGGAACG
CGAAGGACGAAATAAATGATGGCGACTTTCTTCAAAGAAACATTTTATCA
AACACCTTGCTTATCCTTATCAAACACCAAACACCTCAAGGGGATTGGGT
TCAAGTTAACAAGGGTTGATTGACGTTATGTATCAAATGTTAGAGATGTT
AATGTAATAAATTCAGACACTTGACGTCTGTTAACTCTGGTGAACTTGAA
ACTTTCATCTAGTTAGGGGCAAGAGTTGATAGATGTAAACAATGTATTCG
ACGTCCGAATAACAATTAACCATTTCAGTCCCAGAGACCCACAGAGCGAG
TTCCTTCGGGGCCAAACTTAACCGGGCTATATCTCCAGAGCTAAAAGATT
CCCGGAACTTTCGTAGCTACCATCGGAAAAAGCATGAAATTCTGAAGACA
GCAGGTTGGTTTTGAGGCGCCCTTACCTCTTAACCGACGGTGCGAAACTT
TTGAATTCCATTCAAAAAGTGCAAAGGTCTAAGACTGAAAGGGTTACGAC
GTGTGTTTGAGCTGGACTAATAAATGTTAAAAAATTCATATCACCGCAAT
CGATAATGACTCTCCTTGAAAAATAATCTCTCTATTTCGATAGCTAAAGT
TAGTTAGATCTGCTCGATTTCAACGAAGAAGCCACTGTATGTACAATGAC
CACCACCTGCCCCACGCTTTTGTTTTGATGCGTTCTCTACATTCTACTAA
ACGACCCGGGGGGGGGGGCACTCAAGGTTAATGAGGTGCGGCTCTTAATG
GTATATTTTCCTTCCCAAAGTGCATTGTAAGAGTCAAAATCAGCAAACGA
TCTTTGCCCTAAAAATCCATTCGCTTTGAATTTTCACTCTTTTTTTATCT
ATGTGGAAACCATATCAGCGAAATTCGATTTATTCCCTCACATGTAAAGT
AAATGCACTTTGGTTCATATACCTTATATTATAGCCCTTGATAGCCGTTG
ATATGAAAACCTTCTTAAAGGTCTGTTTATACTGTGGCATCTCGAATGAG
ACTCTAATTATGTCTGTGTTTAACTGTTTATTGATTTATTAAGTTAGTAT
TTTCTTGTACTTTTGCATTAACAACGTATGGATATTAATAGAGAGGTGTA
TTTTATATTTTTACATTTTTACGCTGATGATATTTTCAAATTTTTAGATT
CTGTATTTTCATTGATTTTCATCATTTTTTTTATCTAGTGGTAGATTATG
TTATTATTTACATGAGTGATACACCTTTATTAAATTGATCGGTTTTCATG
ATCTCGTACTAAAATTTATCTTATATTTTTTTGAACATTTTCATAAGGTC
TTTGGCATCTTACTCGAATTCTTTGAACAAAAGTATTCAAATGTCAC

Coding sequence (CDS) from alignment at scaffold_331:567092..574038-

>TCONS_00059898 ID=TCONS_00059898|Name=TCONS_00059898|organism=Clytia hemisphaerica|type=CDS|length=3354bp|location=Sequence derived from alignment at scaffold_331:567092..574038- (Clytia hemisphaerica)
TAAACTCCCTATCAGTGGTCGATATGGAGCATTATCTCGATACAAGCAAT
ACAACATCTCTTGCATCTGCTTTGAAGTCTGCATATGCTGTATTCAATCA
AACCATTCAAATGTACTCCTTAGATGAAATATGTATTGGATTCAATGGTG
GTAAGGACTGCACTGCCGTTCTGCATTTATACGTTGCATTTATCAAGAAA
TTCTACCCAGATAATACTAAAAGGATTACTGGGCTTTATTTAAAGAATGC
TAACCCGTTTAAAGAAGCTCAAGATTTTATTAAAAACTGTGAAGCGAATT
ATAATATTGATATGATTGTTATTCCGGCTAGTATTAAAGAAGGCTTGGAA
AATTTGAAAGAATCGCACCCGAAGATTAAAGCTGTGATCATGGGGACACG
TCGCCACGATCCTTACTCATCGCAACTGAAATCGTTTACAATGACCGATG
TTAGCTGGCCTAGTTACATGCGAGTATTCCCGATCCTAGATTGGTCGTAT
GCCGAAGTATGGGATTTTTTGAGAACTTTTGATTTACCTTACTGTCGTTT
GTATGATGAAGGATATACTTCTTTGGGTGACCCTAACAATACACTTAAGA
ACCAAAGTTTATTATTGAAAGATGGTAGATACTCACCTGCGTACATGTTG
CAAGAAGAAAGCTTGGAACGCGAAGGACGAAATAAATGAATGTTAAGGCT
CGCTAATCTGTTTAAATGTAAGTGTAATCATAAATCAATAAGATTATATC
GGCGAACTGTGTTCTTTGGCGTTAAAGACGATAAACTTGTCATGGCTTCA
TCATCCAAAAAAGATTCTGCTGAAGATGCTGCTGCCAGAAAAAGAAATGC
TGGAATTATAATCATTGGAGATGAGATACTGAAAGGACATACCAAAGACT
TAAATGCATCCTTTCTTTTGTCAAAATTATGGACAAATGGGGTCAATGTC
AAGAAAGTCTCCTTTGTTGCTGATGATGTTCAAGAGATCGCCAGTGAAGT
GAAAATATTTTCAGACAATTATTCCTTTGTAATTACATGTGGCGGGATAG
GACCCACACATGATGATACAACATTTGAGGCAGTCTCAAAAGCTTTCAAT
GAGCCACTTGTTGTAAATAATGATCTTGTTACAAAAATTAAGCTTCTGAC
ATCGAAGGAAGATCTTTCCCCTGGGCTTTTGAAAATGGCAACACTTCCTG
AATCTACCAAACTTATAACAGGACAAGATCCAATAACTGGGACATCAGTA
AAATATCCTTTGATGAATGTACATAATGTATTCATTTTTCCTGGAGTTCC
TGAATTCATGCAAAAATCTTTTACAGTGAACCAGTATCTATTTTCGGCAG
AAAACAAATTCTATCTAATGAAAATCTACATCTCTGTAAATGAAGACGAA
ATATCAGCTAAAATAAAAAAGGTTGATGATGCATTCCCTGATGTTAGTAT
TGGGTCTTATCCGATGTTGAATGATATTTACAAAGTAAAGCTGACATTAG
AATCTGAAAATCAAGAAAGTTTGAACAGTGCATTTGATTTGCTCATGAAA
GAACTACCCTCTCAAATCATTGTGTCAGTCAAGAAGTGTGAACCAAATTC
ACGAGAAGACCACCATGAATTGATCAATACAAGCAAAGAATGTCAACAAA
GATCAAGACTGTATTCATCAACACAGTTAAACTCCCTATCAGTGGTCGAT
ATGGAGCATTATCTCGATACAAGCAATACAACATCTCTTGCATCTGCTTT
GAAGTCTGCATATGCTGTATTCAATCAAACCATTCAAATGTACTCCTTAG
ATGAAATATGTATTGGATTCAATGGTGGTAAGGACTGCACTGCCGTTCTG
CATTTATACGTTGCATTTATCAAGAAATTCTACCCAGATAATACTAAAAG
GATTACTGGGCTTTATTTAAAGAATGCTAACCCGTTTAAAGAAGCTCAAG
ATTTTATTAAAAACTGTGAAGCGAATTATAATATTGATATGATTGTTATT
CCGGCTAGTATTAAAGAAGGCTTGGAAAATTTGAAAGAATCGCACCCGAA
GATTAAAGCTGTGATCATGGGGACACGTCGCCACGATCCTTACTCATCGC
AACTGAAATCGTTTACAATGACCGATGTTAGCTGGCCTAGTTACATGCGA
GTATTCCCGATCCTAGATTGGTCGTATGCCGAAGTATGGGATTTTTTGAG
AACTTTTGATTTACCTTACTGTCGTTTGTATGATGAAGGATATACTTCTT
TGGGTGACCCTAACAATACACTTAAGAACCAAAGTTTATTATTGAAAGAT
GGTAGATACTCACCTGCGTACATGTTGCAAGAAGAAAGCTTGGAACGCGA
AGGACGAAATAAATGAATGTTAAGGCTCGCTAATCTGTTTAAATGTAAGT
GTAATCATAAATCAATAAGATTATATCGGCGAACTGTGTTCTTTGGCGTT
AAAGACGATAAACTTGTCATGGCTTCATCATCCAAAAAAGATTCTGCTGA
AGATGCTGCTGCCAGAAAAAGAAATGCTGGAATTATAATCATTGGAGATG
AGATACTGAAAGGACATACCAAAGACTTAAATGCATCCTTTCTTTTGTCA
AAATTATGGACAAATGGGGTCAATGTCAAGAAAGTCTCCTTTGTTGCTGA
TGATGTTCAAGAGATCGCCAGTGAAGTGAAAATATTTTCAGACAATTATT
CCTTTGTAATTACATGTGGCGGGATAGGACCCACACATGATGATACAACA
TTTGAGGCAGTCTCAAAAGCTTTCAATGAGCCACTTGTTGTAAATAATGA
TCTTGTTACAAAAATTAAGCTTCTGACATCGAAGGAAGATCTTTCCCCTG
GGCTTTTGAAAATGGCAACACTTCCTGAATCTACCAAACTTATAACAGGA
CAAGATCCAATAACTGGGACATCAGTAAAATATCCTTTGATGAATGTACA
TAATGTATTCATTTTTCCTGGAGTTCCTGAATTCATGCAAAAATCTTTTA
CAGTGAACCAGTATCTATTTTCGGCAGAAAACAAATTCTATCTAATGAAA
ATCTACATCTCTGTAAATGAAGACGAAATATCAGCTAAAATAAAAAAGGT
TGATGATGCATTCCCTGATGTTAGTATTGGGTCTTATCCGATGTTGAATG
ATATTTACAAAGTAAAGCTGACATTAGAATCTGAAAATCAAGAAAGTTTG
AACAGTGCATTTGATTTGCTCATGAAAGAACTACCCTCTCAAATCATTGT
GTCAGTCAAGAAGTGTGAACCAAATTCACGAGAAGACCACCATGAATTGA
TCAATACAAGCAAAGAATGTCAACAAAGATCAAGACTGTATTCATCAACA
CAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037665XLOC_037665Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059898-proteinTCONS_00059898-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059898-exon-scaffold_331-1575043694:572746..574038TCONS_00059898-exon-scaffold_331-1575043694:572746..574038Clytia hemisphaericaexon
TCONS_00059898-exon-scaffold_331-1575043694:567092..569108TCONS_00059898-exon-scaffold_331-1575043694:567092..569108Clytia hemisphaericaexon
TCONS_00059898-exon-scaffold_331-1510915933:572746..574038TCONS_00059898-exon-scaffold_331-1510915933:572746..574038Clytia hemisphaericaexon
TCONS_00059898-exon-scaffold_331-1510915933:567092..569108TCONS_00059898-exon-scaffold_331-1510915933:567092..569108Clytia hemisphaericaexon
TCONS_00059898-exon-scaffold_331-1491911889:572746..574038TCONS_00059898-exon-scaffold_331-1491911889:572746..574038Clytia hemisphaericaexon
TCONS_00059898-exon-scaffold_331-1491911889:567092..569108TCONS_00059898-exon-scaffold_331-1491911889:567092..569108Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:567092..574038 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.42828	5.42275	2.20112	1.58416	95.1783	70.4076	33.0509	39.0387	20.8825	27.7558	18.1814	13.9258	7.45838	5.9707	7.95954	10.575	10.3901	8.20025	3.59923	3.99134	6.47033	7.19442	13.164	13.3296	8.282	12.6389	6.67451	6.6261	8.02535	8.26012
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001453MoaB/Mog_dom
IPR002500PAPS_reduct
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
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BLAST of TCONS_00059898 vs. Swiss-Prot (Human)
Match: FAD1 (FAD synthase OS=Homo sapiens GN=FLAD1 PE=1 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 2.486e-114
Identity = 199/515 (38.64%), Postives = 295/515 (57.28%), Query Frame = 3 
Query:  453 RKRNAGIIIIGDEILKGHTKDLNASFLLSKLWTNGVNVKKVSFVADDVQEIASEVKIFSDNYSFVITCGGIGPTHDDTTFEAVSKAFNEPLVVNNDLVTKIKLLTSKEDLSPGLLKMATLPESTKLITGQDPITGTSVKYPLMNVHNVFIFPGVPEFMQKSFTVNQYLF-SAENKFYLMKIYISVNEDEISAKIKKVDDAFP-DVSIGSYP-MLNDIYKVKLTLESENQESLNSAFDLLMKELPSQIIVSVKKCEPNSREDHHELINTSKECQQRSRLYSSTQLNSLSVVDMEHYLDTSNTTSLASALKSAYAVFNQTIQMYSLDEICIGFNGGKDCTAVLHLYVAFIKKFYPDNTKRITGLYLKNANPFKEAQDFIKNCEANYNIDMIVIPASIKEGLENLKESHPKIKAVIMGTRRHDPYSSQLKSFTMTDVSWPSYMRVFPILDWSYAEVWDFLRTFDLPYCRLYDEGYTSLGDPNNTLKNQSL-LLKDG---RYSPAYMLQEESLEREGRN 1976
            R   AGIII+GDEILKGHT+D N  FL   L + GV V +VS V D+V  IA+EV  FS+ ++ V+T GGIGPTHDD TFEAV++AF + L  +  L    K L  +     G  K++ +P S +L  G DP TG   ++PL++V NV++FPG+PE +++     + LF +   +F+  ++Y++ +E  I+  + +    F   + +GSYP   ++ Y+VKLTL+SE +  L      L   LP   +V      PN+ E   E +                            Y    + +SL   +  A      ++  YSL ++C+GFNGGKDCTA+LHL+ A +++  PD    +  LY+++ +PF E + F+++    YN+ M+    S+K+ L  L+  HP+++AV+MGTRR DPYS  L  F+ TD  WP++MR+ P+LDW+Y ++WDFLR   +PYC LYD GYTSLG   NT++N +L  L  G    Y PAY+L+ E  ER  R 
Sbjct:  109 RSVTAGIIIVGDEILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVATIAAEVTSFSNRFTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGE-----GWEKLSLVPSSARLHYGTDPCTGQPFRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAVQFHSKELYVAADEASIAPILAEAQAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYM---PNAVEQASEAV----------------------------YKLAESGSSLGKKVAGALQTIETSLAQYSLTQLCVGFNGGKDCTALLHLFHAAVQRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYNLQMLEAEGSMKQALGELQARHPQLEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPLLDWTYRDIWDFLRQLFVPYCILYDRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLENEEEERNSRT 587
The following BLAST results are available for this feature:
BLAST of TCONS_00059898 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAD12.486e-11438.64FAD synthase OS=Homo sapiens GN=FLAD1 PE=1 SV=1[more]
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