TCONS_00059893 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059893
Unique Name	TCONS_00059893
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3484

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_331:548140..555856-
coding sequence from alignment at scaffold_331:548140..555856-

transcript sequence

>TCONS_00059893 ID=TCONS_00059893|Name=TCONS_00059893|organism=Clytia hemisphaerica|type=transcript|length=3484bp
AGAACATATAAATTATACTATTCCGCACTTTCAAGATATAAAAGTTAAAT
CCTTGAAtcaaagaaattgactttgagtGACTGGATTGACAACGCTTCAT
TGTAAAGAAGTTCTTTTATACTCTATTGAAATTTCTATACGTTTTTACGA
TAGTATTCTAATCAAAACCATGAAGAAGCCTGCTTCACCGGAGATAGCAG
AGATTAATATAGCAGAAGAAGAATTGACAACACTTAAAGAACTACAGCAA
CCATTCTGGGATGAAACCGTCAAAGACCTAACAGATATTATACCAAAAGT
ACCACAATGTCAAATTACAGATAACCTCTTGGACACTGGTAAAAATTTAC
CAACATGCAATTCAACAGACTTTTTCGATGAATATGATCAAGAACATTAT
TCAAATTCACCAGCATTGAAAACTACTTCTATGCAATCTCACGAAAGAGA
AAGAACCATATCAGAAAATTGTACTAGGACTCATatcaaagaaaaacttt
tatcaGGGGAGCAAGTCCTTCCAGGAATGAAACGATCTTACTCTGATTCA
GTAACTGATAGTGGACCATCAAAGGATATTAAATTACCCCGAAAAGCCAT
GTTGAGAACTAAAGAAGGAGATACGCTTCTTCACCAGTTGATTTTTGATC
GTCACGAATATGCAAATACATACATTGAAGAAGATTGTGATATTCGAGAA
TTAAATGCTGTCAATCACCAAGGCCAGACACCACTTCACATTGCTGTTTA
TCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGGTAG
ACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCATGt
atgaaaacaaacaaagaagaaGCATTAGAAATCTCAACGATATTGCTGAC
CAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGggaTGG
CTCCTTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTT
CTTCGTTTGAAAGGAGCTGACATCGATTCACAGgatGATAAAACTGGGAA
AACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTTTGA
GTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATATTGT
GACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGCAGC
CAGGATCTTATTGGAAAATGGCGtaaaagttggtatcaaaaatgttcaaa
agaaATCAGAGAAAGAACTGGCTAGTGATATCGAGatcaagaaaatgctt
gaaaaagaATCACGAAGGCAGAAAAGATTACAAAGTATAGAATCAAGACG
AAAAACAAAATCGACAGAGGAAGATCTAATTTCCGAAAACGAATCCGAAA
CTGAAAATTATGGTGATTGATTGAGGTGGGATGTAGATTCATTTAAAGAA
TTCAAAAGTTTCCGTTGGTGAAAGCACTTGGTGTGAtccaaaaatcgaac
tcagttCCTTTGTTTGCTCTTTTATGATTCACATCATGATTGTAATGTCC
ATTAAATATATATAAGTGGAGTCTCCATATCtcgaacacaaatttgttcg
aaagGGCCAGCAAACTTCTTCGAGTTAAGTAAACATTCGAGTTGAATAGA
CTCTACTGTAATATCAAGAAGTATGGCTACATTTcacaggaaaaagtcat
caaatCACACCGGTGTGAAAGTGAAAATCACACGGTGTGAAAGTATACAT
TTCACACTGCTATCCCACGCGTGGGAATCGGTTCGTTTTTACACCGGTGG
GAAACGCTAAATCACACCCCTCAAAATCAAACGTGTATAATTGAATTTCC
GACGTGGTTAACGCAGGATCACACGCTTTAGACATTTTGTGCTGAATCGA
ACAATAAACATGTTAAATCGAAAATCCCACGTCGATTTTGTACTTCAGGC
CCTCTCTCCTCGCGTGTTAAATCGAAAATCCCACGTCGGATTTGGCATTT
TACACTCGCTTATCTTATGTGTTAAATCGAAAATCACACGCCGAAATTTT
TGATTCCCCACCCAGCTTTTTGGGAAATGGCTTTGATTTGTATTTGATAA
ATTgttaaatgtattcgatcattcGTGAGCATTGGCTCGATAGCTCCCAT
TCGTTCTGTCATGTACTTGCGCTNNNNNNNAgcacttttgtcacaacagt
ggagctgcactagagagccaatttaatgacctcaaacccgtctcaccgat
ccactgagcccttgcgacgcaagtccattgcgaacgaaCGAGGCCGCCCT
TGCgggacgcctcacctttagcgttgtgttacacactgatcgaatACACC
CCTATAATGTTATGATTTGAATGCAATCTGAACAGTTTTGACCcaatttt
cacttgtggttttctttacgcatgcgtagtaCAAGGGTGGGAATTGTACT
TTCCCACCCTATCAATTTGACTTTCCCACCCGTGGGAACTAATTACTGCG
ATTTCTTGTGTCTATCTTGTCCTTCTacaggaaaaagtcatcagATCACA
CGGGTGGGAAAACTTTAATTCCGAAATTTAGAGTTTTTTAGTGTAAGTTT
TATACTTCTTGGACTAGGGTTGCATTTTATTCGCCTGCGGAAATTAGAAA
TCACACGTGTGATTTCGATAAAGCCTTTTCAGTGAAGTTTAAATgtgtta
aattggatttcacacgccgaatttaaaaaataaaaacaattatttgaaaa
attccgCAGTGTGATATCGGAAATCACACTGCCAAAACAATCACACCTTA
TCAGTTTATAAAATCACACGCAAAAATTGATGTTTGAAAATTACGGCGTC
GGAATTTAAGTTTTCCCACCCGTGTGATctgatgactttttcctgtgTTT
GCCATAACTAATGCATGTCAGTTAAAAGTAATGGATGAGACAGGATGAGT
TTCATTGACAACAACTGATGAcacctacatgtttttttataagcatatga
aaatCCAAAAACTGACTCGAAAATACTTAGATCGATAGATTTACAGGCTG
AAAATGCTTTCAAGGATGCTTTTAtcctaagcaaaattttaaagaaattc
taAAATCCATAAAATCCCAGTCAAAGACAGGCAAAATGTAGGTTATATCA
GCTTGTGCTTTTTGCCTAGATATaattataagtgcaatgtttataaaaaa
cataTGTTCATTCAGTATGGTTTTTGGGATAAATGACTTTGATGAACAGA
AAATCACTTAACTGCTGGCGAGTATGAAATCATCCATCTAAGATGTCATG
AAATATTtatgtactctcgggtacctaatagccgggatgtttggaataag
caggggggttggaaaaaatctcgaaagttaataagcgggggattgaaata
aaattgtcctgggtggaaaattttcgaaaaagaggctaatacagcagaat
tagggcaaaagagggaactttcaaaaaaaatttc

Run BLAST on NCBI

protein sequence of TCONS_00059893-protein

>TCONS_00059893-protein ID=TCONS_00059893-protein|Name=TCONS_00059893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MKKPASPEIAEINIAEEELTTLKELQQPFWDETVKDLTDIIPKVPQCQIT
DNLLDTGKNLPTCNSTDFFDEYDQEHYSNSPALKTTSMQSHERERTISEN
CTRTHIKEKLLSGEQVLPGMKRSYSDSVTDSGPSKDIKLPRKAMLRTKEG
DTLLHQLIFDRHEYANTYIEEDCDIRELNAVNHQGQTPLHIAVYLGSIST
IKKILEKRLVDLERYDSDLNTPLHLACMKTNKEEALEISTILLTKCTSTS
IVNSKNEEGMAPLHLAAVRNDLELIKLLRLKGADIDSQDDKTGKTCLMYL
AENDMEGKTLSHVVEYFDADVDKFSYCDSTALHFACGKNNSNAARILLEN
GVKVGIKNVQKKSEKELASDIEIKKMLEKESRRQKRLQSIESRRKTKSTE
EDLISENESETENYGD

Run BLAST on NCBI

transcript from alignment at scaffold_331:548140..555856-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059893 ID=TCONS_00059893|Name=TCONS_00059893|organism=Clytia hemisphaerica|type=transcript|length=7717bp|location=Sequence derived from alignment at scaffold_331:548140..555856- (Clytia hemisphaerica)
AGAACATATAAATTATACTATTCCGCACTTTCAAGATATAAAAGTTAAAT
CCTTGAATCAAAGAAATTGACTTTGAGTGACTGGATTGACAACGCTTCAT
TGTAAAGAAGTTCTTTTATACTCTATTGAAATTTCTATACGTTTTTACGA
TAGTATTCTAATCAAAACCATGAAGAAGCCTGCTTCACCGGAGATAGCAG
AGATTAATATAGCAGAAGAAGAATTGACAACACTTAAAGAACTACAGCAA
CCATTCTGGGATGAAACCGTCAAAGACCTAACAGATATTATACCAAAAGT
ACCACAATGTCAAATTACAGATAACCTCTTGGACACTGGTAAAAATTTAC
CAACATGCAATTCAACAGACTTTTTCGATGAATATGATCAAGAACATTAT
TCAAATTCACCAGCATTGAAAACTACTTCTATGCAATCTCACGAAAGAGA
AAGAACCATATCAGAAAATTGTACTAGGACTCATATCAAAGAAAAACTTT
TATCAGGGGAGCAAGTCCTTCCAGGAATGAAACGATCTTACTCTGATTCA
GTAACTGATAGTGGACCATCAAAGGATATTAAATTACCCCGAAAAGCCAT
GTTGAGAACTAAAGAAGGAGATACGTAAGTGAAAATTTACCGATTTGGCG
AGTATATAGCCCATATTTTCTAATGATCATAACCGCACCCTACACCCCCT
TCTCAAAAACCCGGTAGGATTTTTTCAGCTAGTGGGGATAAAAATAACGG
ACTAAAACTCGATGGGGATTGATATTCCCATATTTCTTATGGCTGATAAT
TTTAAATTTTTTGTTTTCAAGCCAGAAAATTCAGTGAGGATACAGGCACG
ACGGAAGCTTTTTATATCTGGTACGGCGAATGAGGAAATTTAAGCGATTT
CATAGCGATTTTACCGACGAAGAGGAAAACTTCGGGTATTTTTGTGAAAA
TCTGGTACGGCGGGCGCCGGACCCGCCGGACCCCCTGCGGCGGGCCCGGG
GGTGGGAAAAAAAAAAAAAATTTTTTTTTTTTTAAATCAAGGGGGGGCGC
CCGCCCCCCCCCCCCCCTGCCGTACCCGTTGCGTCGTGCCTGGGATAGGA
ACAATAACCTAATATTTTGCAGTAAGGATTTGTTTATTTGAATATTTAGA
AGATAATTTTCGACCAGGGATGTATGTATGTATGTAATAGTTAATTTCAA
GTTGACGAACAGGTAGCAACAAAGGCTAATAAAAGTCAACGCGTCAAGGG
ATGATATTTTCCAGTGGGAAGGGTTCCCAATGGGTCTGTGAGAAGGGGGT
GTCACCCTGCGCTGCACACATGATCATATAATCCTATGAAACTTATTTAT
CAAGCTAATCAAATTTCTAAAACTCAAAAACACAAAGAATGGGGTAATTC
TCGGATGGAAATTTTATACGCGATGAACATCCCCTATATCAAAACATATC
AGAGGGTATGCGTGCAGCCTAACCCCACCCTTGTACCCTCATGACATACG
GTAATCTAAGATGCGAAAATAATGTCCAGCCTGCACCCACAATATTTATA
TCAATGTTGAAATAACACCGTGAGATAGCATTGTGGGTTACATGTGGGTG
TCACGGATCTGGTGGAGGCGACCCCTACTAACTAGGAAAATGCATTCATT
CGGTTAAAACATAAAATATTAGTGTTTTCAGGGGTGGATAAAGTTTCTTT
GAATTTATGCCTGAGAGCGAGCCTGAGAGTTTGAATTTCCATATAATCTC
TTAAAAAAGCTAATAGAAAAACATATAACAAAATCTAAAAATTGAATAAA
AACAAGCCTGCAAATTGCCAACGCAATTTATTTTAGTTTATAAACAAAAG
AAATTGTTTTTGTTGTTGATTTTAAACAAACATTAATAAATCAATCCATG
ACTTTTATTCTCTCTATTCCAGGCTTCTTCACCAGTTGATTTTTGATCGT
CACGAATATGCAAATACATACATTGAAGAAGATTGTGATATTCGAGAATT
AAATGCTGTCAATCACCAAGGCCAGGTATGATATCAAAAGTTTTACATTT
TTTGTATTAGGTATGCATGTGCTGAATCTGTTTGAAGGGGATACTCCTTC
TCAGACCCACTGGGACCACTTCCCATTGGAAAAATTGGCCAAAATATCGT
CCGGAAAATTATACTCTAATTTTTTATCCCCGCCGAAAATAATCAGATGA
GCAAATCCTCACTGTAAAACATTATTTTCTATCCACACTGAGTTTCCTAG
GTCGGAAACAATCGGTCCCCATCAAGTTTTGGTCCGTTATTTCGGTTATT
TTTACCCCCACTGGCTGAAAAAATCCCACCGGGTCTGTGAGAAGGGGGTA
TAAGGGGTTATACTTCTTTGTCGTGAAGCGACCCATCTTTATCTATAAAA
ATAAACAGGGCCATTTTCGGGCTTTGGAAATTTAAGACGACGAAGGAAAA
GGATATTTTGACAATAATTTGAATAAAATTTCATTGCTCTTCTTTTCAAA
ATTTCAAATTCCTCTAAATAATATTTTAAGGCTCAAAATTAAAAATTTTA
AGGATATTCGAATCTTGTTAATAACTGTTTGATAAGGTAGATACATCAAT
ATTGTGGGAAGATATTGTTATCAACGTTATTTTTTACACCAATATCTAGA
CACCACTTCACATTGCTGTTTATCTTGGTTCCATATCGACAATCAAAAAG
ATTCTTGAGAAACGATTGGTAGACTTGGAACGTTATGACAGTGATCTAAA
TACGCCTCTGCATTTAGCATGTATGAAAACAAACAAAGAAGAAGCATTAG
AAATCTCAACGATATTGCTGACCAAGTGTACTTCAACTTCGATTGTCAAT
TCTAAGAATGAAGAAGGCAAGTCTCTACTCTATTATCCTTTTTTACTCAG
AGTCCTGAGTGAAATGTGTTACAATGTAAGAATTTACTACTAAACTTTAC
AACTAATGCTCTTCTCAGAGACTGTCATAATCTGACCAATACCATGTGTA
GAATATCTTCTGCAGCCAGTGGGGTTAAAGATAACGGATTGAAACTCGAC
GTGGATTTATATTTCCATGTTTTTTATGGCTGGAGATTTGAATTTCATTG
TTTTCAAGTCATAAAATTTAGTGGGGATGAAAAAAATAGCACAACATTTT
AACAGTGAGGATTTGTTTATTTGATTATTTTTAGTGGGGACAGCATTTGA
GTATTATTTTCCACTTGGAACGATATTTTGGCCAATTTTTTCCAGTGGGA
AAGGGATCTTACCATGTCTGTGATGTGAGAAAAGGGGTGTTAACTTCCTA
TTTAATCTGACACGTACACTTGTTTCATTTTTGTTTTGTAAATTTAGGCA
TTCCCAATTATACACAATGGGCTACTGAGACATGGGGTATTACTACATAC
TTAATATCTTTTCGGACACGCAGGCTTTACATTTCTGATTCTTCCTTTTT
TTCTTTCAGGGATGGCTCCTTTACATTTAGCAGCAGTTAGAAACGATTTA
GAGTTGATAAAACTTCTTCGTTTGAAAGGAGCTGACATCGATTCACAGGT
AAATTGAATATACCTCAAAACTTTGCATAAATCATATCTATAGGGTGTCA
AGGTGATAACAGGCGATGGGATCCGTGGAGCTTGTTGATGGTTAGCTCTT
CAAACCAAATTGAAACATAATTTAGGGTAAGGTCACGTAAGAATGGTCCA
ACGCATTTCGTCCAACATGCCATTTTTTGAATGTAGGATAGACTCGGGGG
CGGGGTACTTAGTCAAATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTA
CCTTTTTTGGACTTCCAAAGTCCCGCTAAGGGTCGGAAAAATCAGAAAAT
CAAATTTCAGTCCCACTAAGGGTCGGAAAAGTAGGAAAATTTCAACTTTT
TTACCCCTTGAAAGATCGAAATTTGATCAAAATTAGTCAAATTAGTCCCG
CTAAGGGTCGTAAAATTCACAAAATTTTCTTTGGTTTTCTCTTTTTTAGT
CCCGGTAAGGGTCCAAAGTTCGAAAGTCGGGCGGCCCGTCCCCCCGTCAG
CGCGCAACCCTAGTACCCCCCCCCCCTGGGGGGATAGATTTGCTGTGCAA
GGGGTCACGATAGTGGTTAAAGATTTTACATGCCAGATTTACAATACAAA
TTCAGATTGTTCATTCGTTTTAGTCAGAGTTTCTTGCTCTTTCCAACTTA
GCTGAGCGAGTTCCTGGAAGGCTTAATTTCTGAGGTATGACGCTTTGAGG
TTTGCTCACTGTTCCCTATATGACCCACCAAATGGTGGCCTGTCTGTGCA
TTCAGAAAAAGTTAATACCTATATTTCAATTTTCTTCAAAATTTTAAGGA
TGATAAAACTGGGAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGG
AAGGGAAAACTTTGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGAC
AAATTTTCATATTGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAA
CAATAGCAATGCAGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTA
TCAAAAATGTTCAAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAG
GTAAGCTAATGAACCAACTAAGAAAAAAATGGAAAAAAAGCGTATAATTT
GTTTTAGTAAAAACTTTAGTATTTGGATACAAACCAAGCTAATTGGGAGT
AATTGGGTAAAGAAGACTTATCGTCGTTTTTTATAAGTTTCCCATTTCCG
CACTAAGATTTCTATGTCACTGTACTAGCGGAAAAAGACCAGGACTTTGG
GTAATTGAAAAAAGAGCTTCGGAAAGTTAAGCAGTTTGAGTAAACACATG
ATTTTCCAAACCCTTTCCGATCTAATGCCGGTTATCTTGGGAAAAATAGC
GGAAATAATTCGGAAAAGTGACAGGAATCTTAGTGCGGAAACGGGAAATG
TATAAAAAAACGACGGTATACAGTACCTATTTTCACAATTTCTCCTCCCA
AAAGACCATGAGTTGAAAATATCGGGCCTAAATTTAGTAGAACAAGAAAC
AATCGAAAATCCCTCCTACAGGTCAGAAGCGGTAGATTTATTTCTCTACC
TTTCAAGGTTCGTTTTTTTTCCAATTTCAGCTCGAAAATAAAGTTACTTT
ATAAACCAATCCTTCCAGGCCAGTTCATCCCGGGGGGGGGGGGGTACTAC
CCTTGTCGACCGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTA
CGGGGGACTCGAAATTTGCGAAAAAAGTGACCCTGAATGGGACTGAATTC
CAAAATTTTCTCAAATTTTCTACTTTTTACCCAAATTTTCCAAAAATAGG
CACTCTACGAGGGACTGATTTTTCGATTTTGGTGTTTTTGCGACCCTACC
TGGGACTCGTGGAGTTTAAAAAAGGTACCCTGACCAGCGGAGCATCCCTG
TAACCCATCTTGCCCTAGTACCGGGACTTCATCAAAACAAAAATTGTGTA
TCTGATTTCTTTCTTTAGATCAAGAAAATGCTTGAAAAAGAATCACGAAG
GCAGAAAAGATTACAAAGTATAGAATCAAGACGAAAAACAAAATCGACAG
AGGAAGATCTAATTTCCGAAAACGAATCCGAAACTGAAAATTATGGTGAT
TGATTGAGGTGGGATGTAGATTCATTTAAAGAATTCAAAAGTTTCCGTTG
GTGAAAGCACTTGGTGTGATCCAAAAATCGAACTCAGTTCCTTTGTTTGC
TCTTTTATGATTCACATCATGATTGTAATGTCCATTAAATATATATAAGT
GGAGTCTCCATATCTCGAACACAAATTTGTTCGAAAGGGCCAGCAAACTT
CTTCGAGTTAAGTAAACATTCGAGTTGAATAGACTCTACTGTAATATCAA
GAAGTATGGCTACATTTCACAGGAAAAAGTCATCAAATCACACCGGTGTG
AAAGTGAAAATCACACGGTGTGAAAGTATACATTTCACACTGCTATCCCA
CGCGTGGGAATCGGTTCGTTTTTACACCGGTGGGAAACGCTAAATCACAC
CCCTCAAAATCAAACGTGTATAATTGAATTTCCGACGTGGTTAACGCAGG
ATCACACGCTTTAGACATTTTGTGCTGAATCGAACAATAAACATGTTAAA
TCGAAAATCCCACGTCGATTTTGTACTTCAGGCCCTCTCTCCTCGCGTGT
TAAATCGAAAATCCCACGTCGGATTTGGCATTTTACACTCGCTTATCTTA
TGTGTTAAATCGAAAATCACACGCCGAAATTTTTGATTCCCCACCCAGCT
TTTTGGGAAATGGCTTTGATTTGTATTTGATAAATTGTTAAATGTATTCG
ATCATTCGTGAGCATTGGCTCGATAGCTCCCATTCGTTCTGTCATGTACT
TGCGCTNNNNNNNAGCACTTTTGTCACAACAGTGGAGCTGCACTAGAGAG
CCAATTTAATGACCTCAAACCCGTCTCACCGATCCACTGAGCCCTTGCGA
CGCAAGTCCATTGCGAACGAACGAGGCCGCCCTTGCGGGACGCCTCACCT
TTAGCGTTGTGTTACACACTGATCGAATACACCCCTATAATGTTATGATT
TGAATGCAATCTGAACAGTTTTGACCCAATTTTCACTTGTGGTTTTCTTT
ACGCATGCGTAGTACAAGGGTGGGAATTGTACTTTCCCACCCTATCAATT
TGACTTTCCCACCCGTGGGAACTAATTACTGCGATTTCTTGTGTCTATCT
TGTCCTTCTACAGGAAAAAGTCATCAGATCACACGGGTGGGAAAACTTTA
ATTCCGAAATTTAGAGTTTTTTAGTGTAAGTTTTATACTTCTTGGACTAG
GGTTGCATTTTATTCGCCTGCGGAAATTAGAAATCACACGTGTGATTTCG
ATAAAGCCTTTTCAGTGAAGTTTAAATGTGTTAAATTGGATTTCACACGC
CGAATTTAAAAAATAAAAACAATTATTTGAAAAATTCCGCAGTGTGATAT
CGGAAATCACACTGCCAAAACAATCACACCTTATCAGTTTATAAAATCAC
ACGCAAAAATTGATGTTTGAAAATTACGGCGTCGGAATTTAAGTTTTCCC
ACCCGTGTGATCTGATGACTTTTTCCTGTGTTTGCCATAACTAATGCATG
TCAGTTAAAAGTAATGGATGAGACAGGATGAGTTTCATTGACAACAACTG
ATGACACCTACATGTTTTTTTATAAGCATATGAAAATCCAAAAACTGACT
CGAAAATACTTAGATCGATAGATTTACAGGCTGAAAATGCTTTCAAGGAT
GCTTTTATCCTAAGCAAAATTTTAAAGAAATTCTAAAATCCATAAAATCC
CAGTCAAAGACAGGCAAAATGTAGGTTATATCAGCTTGTGCTTTTTGCCT
AGATATAATTATAAGTGCAATGTTTATAAAAAACATATGTTCATTCAGTA
TGGTTTTTGGGATAAATGACTTTGATGAACAGAAAATCACTTAACTGCTG
GCGAGTATGAAATCATCCATCTAAGATGTCATGAAATATTTATGTACTCT
CGGGTACCTAATAGCCGGGATGTTTGGAATAAGCAGGGGGGTTGGAAAAA
ATCTCGAAAGTTAATAAGCGGGGGATTGAAATAAAATTGTCCTGGGTGGA
AAATTTTCGAAAAAGAGGCTAATACAGCAGAATTAGGGCAAAAGAGGGAA
CTTTCAAAAAAAATTTC

Coding sequence (CDS) from alignment at scaffold_331:548140..555856-

>TCONS_00059893 ID=TCONS_00059893|Name=TCONS_00059893|organism=Clytia hemisphaerica|type=CDS|length=7506bp|location=Sequence derived from alignment at scaffold_331:548140..555856- (Clytia hemisphaerica)
ATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTACAAAG
TATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAATTTCCG
AAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAACTGGG
AAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTTT
GAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATATT
GTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGCA
GCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTTCA
AAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCTCCTTT
ACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTTCGTT
TGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTGTTTAT
CTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGGTAGA
CTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCATGTA
TGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGCTGACC
AAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGCTTCTT
CACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATTGAAGA
AGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCAGATGA
AGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGAAGAA
TTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCGTCAA
AGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACAGATA
ACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGACTTT
TTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGAAAAC
TACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAATTGTA
CTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCTTCCA
GGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCATCAAA
GGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGAGATA
CATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTACAAA
GTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAATTTCC
GAAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAACTGG
GAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTT
TGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATAT
TGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGC
AGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTTC
AAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCTCCTT
TACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTTCGT
TTGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTGTTTA
TCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGGTAG
ACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCATGT
ATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGCTGAC
CAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGCTTCT
TCACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATTGAAG
AAGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCAGATG
AAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGAAGA
ATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCGTCA
AAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACAGAT
AACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGACTT
TTTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGAAAA
CTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAATTGT
ACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCTTCC
AGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCATCAA
AGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGAGAT
ACATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTACAA
AGTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAATTTC
CGAAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAACTG
GGAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACT
TTGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATA
TTGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATG
CAGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTT
CAAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCTCCT
TTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTTCG
TTTGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTGTTT
ATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGGTA
GACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCATG
TATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGCTGA
CCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGCTTC
TTCACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATTGAA
GAAGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCAGAT
GAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGAAG
AATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCGTC
AAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACAGA
TAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGACT
TTTTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGAAA
ACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAATTG
TACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCTTC
CAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCATCA
AAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGAGA
TACATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTACA
AAGTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAATTT
CCGAAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAACT
GGGAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAAC
TTTGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCAT
ATTGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAAT
GCAGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGT
TCAAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCTCC
TTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTTC
GTTTGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTGTT
TATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGGT
AGACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCAT
GTATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGCTG
ACCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGCTT
CTTCACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATTGA
AGAAGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCAGA
TGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGAA
GAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCGT
CAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACAG
ATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGAC
TTTTTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGAA
AACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAATT
GTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCTT
CCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCATC
AAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGAG
ATACATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTAC
AAAGTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAATT
TCCGAAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAAC
TGGGAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAA
CTTTGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCA
TATTGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAA
TGCAGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATG
TTCAAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCTC
CTTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTT
CGTTTGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTGT
TTATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTGG
TAGACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGCA
TGTATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGCT
GACCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGCT
TCTTCACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATTG
AAGAAGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCAG
ATGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGA
AGAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCG
TCAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACA
GATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGA
CTTTTTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGA
AAACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAAT
TGTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCT
TCCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCAT
CAAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGA
GATACATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATTA
CAAAGTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAAT
TTCCGAAAACGAATCCGAAACTGAAAATTATGGTGATTGAGATGATAAAA
CTGGGAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAA
ACTTTGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTC
ATATTGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCA
ATGCAGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAAT
GTTCAAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGGATGGCT
CCTTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCT
TCGTTTGAAAGGAGCTGACATCGATTCACAGACACCACTTCACATTGCTG
TTTATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGATTG
GTAGACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTAGC
ATGTATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATTGC
TGACCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAGGC
TTCTTCACCAGTTGATTTTTGATCGTCACGAATATGCAAATACATACATT
GAAGAAGATTGTGATATTCGAGAATTAAATGCTGTCAATCACCAAGGCCA
GATGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAG
AAGAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACC
GTCAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTAC
AGATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAG
ACTTTTTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTG
AAAACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAA
TTGTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCC
TTCCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCA
TCAAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGG
AGATAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037663	XLOC_037663	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059893-protein	TCONS_00059893-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_331	supercontig	scaffold_331:548140..555856 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.424695	0.364344	0.803628	0.689655	2.25609	1.21715	0.98911	1.56439	1.05874	1.36528	3.40121	1.12853	17.3222	2.70927	0.989664	1.49596	0.935491	1.05611	2.2875	2.51844	1.23078	1.30882	1.11114	1.28457	6.07945	4.46067	2.5633	2.15958	0.745461	0.855508

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00059893 vs. Swiss-Prot (Human)

BLAST of TCONS_00059893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00059893 (transcript) - C. hemisphaerica