TCONS_00059709 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059709
Unique Name	TCONS_00059709
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2640

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_330:464433..474146+
coding sequence from alignment at scaffold_330:464433..474146+

transcript sequence

>TCONS_00059709 ID=TCONS_00059709|Name=TCONS_00059709|organism=Clytia hemisphaerica|type=transcript|length=2640bp
AGTCAGGTCAGCATCCTGATGGCAGAAGCAGAAATGTCAGAAGTGGAAGA
GGTCTGTCAGTTCCTGTCTGGCCGAGGAGTGGACACTCGAATCATTGAAA
ACTTCAGGCAAAATGAGATGACAAAGGAGGCAGTCTGGAATGCAACAAAT
AGTGACTTAAACAATCTAGGTCTGAAGAAACAAGGACATATAATATGCCT
GAAGACATTCTGTCATGTAACAAACTCACCCAAAGGCAAACTGATTGAAT
CGATTAAAGATGCAGGAAGATCAAGAGTAGTTAACAGAAGAAAAGCCAGT
AACAAAACTGTGTATATTGGTTGGTTGCATTACTGTccaagacaaagaaa
atttgtttcTATTCGTGGACAAAAAGGCGGAATAAGGAGATTGAAATTAT
CACCAAATACAACGCTTCGGGAACTTAGGTTCAAAGCGAAAagtatcttt
ttcaaaaatggaaaGTCGAAAAAAGGAAAAGCTAGCTCCATGATGTTCTA
CCTTGGATACTATGATAATGAACTAAtcgatgatgaagatgaagatcaAA
CTCTTGAAGAGTACATAAATACCCATAAATATCCTAAGGTACGTCTTTAT
TTAATGTCAAAACCTATCGCATACGTAACTCACTCATTAGAGTCAGACTC
TGAAGGTTCAATCCACAATGATTCAATTGGACATGACGGAGATTCAAATA
ATCCAATCGAACATGAGGGTGGTTCAAATCCAATTGGACATGACGGTAGT
TCAAATATAATTAGAAATGACGGAGATTCAAATGCAATCAGACAAAACAG
ACTTGAAAATCTGCCAGAGGAGCCGAACTTATTAGACGAACATAATGTTA
TTAGTGTCAATGTTGGTGGAATTATTCGAAGAAGGTTGTTTTCCGCTCTT
GCCAGAGTCAGGGAGGTTTATAACTGGGTAGGATCGATGCCCGATGTTCC
TCTACATTTCAACCTTATCTACAACCAATCAGTCTTGGATCTAGATAATT
TCGCCTCTAACTATTCACAATTGTTACTTGATATCGAGGAAATTAGAAAT
ACTTCGACCAGAAATGATTCAGAAGAACCACAAGAAGAAACTCTTGAACT
TGCTGAAAATGTCTTCCAAGCAACAGCTGACCACAATGAAAATGCTTCTC
AAGCAACACCAGAAATTGTTCAAGAAAATGCCGACCCGAGTATCGTTTTA
GAAGAGGACAATGATTCCTTAAAAGTTGATAGGTACGATATCGTGGAATC
CCTTTTCAAATTGTATCGAAATGACAACTCATTGGAAGAAAGAGAAAACT
TAACTATTGGCTACATAAATGAATCTGGTGTCGGTGAAGGCGTTATCAAA
GATGTTTATTCATCTTTCTTTGCCGAACTTGCGAAAATGCAAAGCTCAGG
GCTTTTTGAATCGGTTCCTTCGAGTCTGACTGAAGAAGAGGCACGATTGC
TTGGAAGGATAATTTCACATGCCTACTCCAAGTTTAGAGTTTTCCCATTT
CAAATGGCAAAAGCGTTTATTGAAATGCTGTTGTTCGATCATGTCCGGGA
TACAACTTTAATagaatcctaccaaaacttccTTATGGTCAACGAGAGTA
AaattctcgtaaaatgtttgaGAGGAAATGATTTAAATCAAGAAGAAACA
GACGACCTGTGGGCCGCTTTGAATGAAAGTAACATAAGAGCAAAAcccaa
aaaggaaaatattcacGCACTGGTTATCAAAGCAGCTAAATACGAATTCA
TTCAAAAACACTTTTATATCATGAAGGGAATACAAAAGGTAATAAAAGAA
ACTAACGCATTGAACTTTGGTTTGATTGATGATATGGATGCTTTCTATGC
CTCGGCCATGCCGACCGTAAGTAACGTCCTGGAATATGTTTCTTTCGATT
GCAAGAATCCCTCAGAGGAGAGGGTACAATTTTATTTCGAACGATATGTT
CGGTCCTGTAACCGAACACAATTAATAAAATTGATCCAATATGCAACAGG
ATCTAACACGATTTCATCTGTGGGAACCGTTAAGGTTTCGTTCGTCAATC
AGGAGAAGAATCTTAAGATAAGAGCAAaatcttgttttaaaattttatat
ttaccAAGACAAATAAAGGATATGAATGTATTTAATGGTTTGATGGCAGA
AATAATGGATAGAACTGATGTGTGGGAGCTTCATGATGAGTGGGAGCTTC
GGGGTGATGAATAAGAATGGTTTAGTGAACATTACATTGAACGATTGAAC
GATCTGTCTTAAGTTTAAAATTCATGTTTTGTAGTTATAGCTTTTCAATA
CTTTAACCGCCAAAGGTTTCTACCCTCTGTAGTGGTAGTAGGGGGGGGCA
TAATCGaccttttttcgattttttaccTTAACATTTTTTGGGTGCTGATT
CCGAAAATCATACTCATTTTGGTTGAAAATCAATATTCAGCTTACTACCC
TATGCAGCAAGTTGGCCAAAATGCCCCAAAATAGGCATTTCTGTGTGGAG
CTTGTACCCAATGTTTTATTACTATTTCTAGGTAATGTATTATTTTCTTT
GGTCCAAAGGCTTCCGAATAGGCCACTGATGATGTCACAAGCCAACGTTG
TCCTTATTCTAGTATTCTAGTCAAcctggtttgatttttt

Run BLAST on NCBI

protein sequence of TCONS_00059709-protein

>TCONS_00059709-protein ID=TCONS_00059709-protein|Name=TCONS_00059709-protein|organism=Clytia hemisphaerica|type=polypeptide|length=737bp
SQVSILMAEAEMSEVEEVCQFLSGRGVDTRIIENFRQNEMTKEAVWNATN
SDLNNLGLKKQGHIICLKTFCHVTNSPKGKLIESIKDAGRSRVVNRRKAS
NKTVYIGWLHYCPRQRKFVSIRGQKGGIRRLKLSPNTTLRELRFKAKSIF
FKNGKSKKGKASSMMFYLGYYDNELIDDEDEDQTLEEYINTHKYPKVRLY
LMSKPIAYVTHSLESDSEGSIHNDSIGHDGDSNNPIEHEGGSNPIGHDGS
SNIIRNDGDSNAIRQNRLENLPEEPNLLDEHNVISVNVGGIIRRRLFSAL
ARVREVYNWVGSMPDVPLHFNLIYNQSVLDLDNFASNYSQLLLDIEEIRN
TSTRNDSEEPQEETLELAENVFQATADHNENASQATPEIVQENADPSIVL
EEDNDSLKVDRYDIVESLFKLYRNDNSLEERENLTIGYINESGVGEGVIK
DVYSSFFAELAKMQSSGLFESVPSSLTEEEARLLGRIISHAYSKFRVFPF
QMAKAFIEMLLFDHVRDTTLIESYQNFLMVNESKILVKCLRGNDLNQEET
DDLWAALNESNIRAKPKKENIHALVIKAAKYEFIQKHFYIMKGIQKVIKE
TNALNFGLIDDMDAFYASAMPTVSNVLEYVSFDCKNPSEERVQFYFERYV
RSCNRTQLIKLIQYATGSNTISSVGTVKVSFVNQEKNLKIRAKSCFKILY
LPRQIKDMNVFNGLMAEIMDRTDVWELHDEWELRGDE

Run BLAST on NCBI

transcript from alignment at scaffold_330:464433..474146+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059709 ID=TCONS_00059709|Name=TCONS_00059709|organism=Clytia hemisphaerica|type=transcript|length=9714bp|location=Sequence derived from alignment at scaffold_330:464433..474146+ (Clytia hemisphaerica)
AGTCAGGTCAGCATCCTGATGGCAGAAGCAGAAATGTCAGAAGTGGAAGA
GGTAAGCTTTCTATTTCTTTGTACAATTTCCAATTGACTTTGTACAATTT
CCAATTGACATGTTTTTCCACCCCAAAACCTGCCTTAAATTTTAAAACAA
CGGGTACTTTTCTGCCAAAAGGTAACATTTTTCAAAACAAAATCGACTGG
CAGAATTTCTATACTATACCTAGTAGATAAATACTTTTTTATTCTTATGG
AAACACCTGGAATCACAATCTTTCATGGTTTTTACCCCTAACTGTAGATT
GGGCCAGTGAGAGGGGAATTCATTTGCGAAAATTACTTGTAATGAGCTAC
CGCAAAGTAGAGAATTATCGCCTAGAATTTAGTCAGAAAATCTGCCGTAT
ACTATCTTCGCTTTCTCTGATTTGAATGATGGCACTACTTTTCCCCCCAT
CGGAATTTTTAAAGGCAAAAACAAAAAGTAGTTGAGCTCCAGCTTCTGGA
CTACCTAGAATTAGATGTGGGTTACTACTTTCATTAACCATAGGCAATGG
GATGTCAATCATCAAACTGTTAGATTACTGAATTAATACAAATTAATCAA
CTTTAATCAAACAAATGGTGTTTGACTACCAAACCAAATCAAACAGTAAT
CGACAGATCGAACCAAGAAATTTAAGTTAGTTCAATGACTGTTCGGTTGG
TCTATTTCAATGTTCGATCATGATTCGATTATATAGTTCGATTGGTTCGA
TTATAATTCGATACAGGACAGGTTCGATTGTTTTGCTTTTTCTCATAATA
ATTTAAAAGGCTCCATGGTTATTATTCATAATATTTACATTCTATAAGAA
TTGCTAACCTTGCTTTTTTTCATAATAATTTAAAAGGCTCTGGTTATTAT
TCAAAATGTTTACATTCTAGATGACAATAACAAATAAATTACATTAATTT
TTATTTTTATAAGAATGGTGTTTTTCCAGTTCATCATGAATATTCTTAAC
TTTTTCGGAAAAATCAACTTATAATATTCTTAAGGCATTCTTAGTCAACT
TTCAAGCCATACCTCAATAATACAATACCAAAGAGGAAATTCTAGAAATG
ATACCATTTCAAGGTAACAAAATCCTGAAATTCTTGAATTTTTAGTGTAA
ATTAAGAGAGTTAGGCTCACATAAAAAGATAAAAATAGAAATTTATGGTT
GCCAAAACAAATTTCACGATGGCAATATTCTTAGGATTATTCTTAATTTT
TCGGCCAATTTTATCATGAATATTCTTATAAAATATATTCTTATACAAAA
AAAGTGTGTAACAAAATAACAAAAAATACAAATTGTAGGATGTTCAATGG
GATGAAAGTTGGCCCTTAGTGGGGACTCAAGAATTTTTTTTCACGTTGGT
GCAGTGCAACATGCTCCATCGCACCAACCTGAAATGTTTTCTTGTGTTGC
caccatttttttctccttttgaaATGAAATAGCACTTTTGAATCAATTGa
tttgaatcaattttgcttaATTGTCCTAGGGACAAAATTGCACGTTGTTT
GGGTTTTCCCCTCAATATTTGTcccatgaaatgaaaaaaagaaaccatct
gacacgcatttttttcttcttttggttGGGGCATGGGGgtcgtccacata
gtacgtacgcactaaaatgtaaaaaatcgaGTTCCCCTCCCCTTGTGTCG
GCAAACGTACACATATGCATCTATACCCCATGTTTGTACGTACTTTTCCC
CCaggcgaaaaaaattttctggctcagGCCTATATTTCAGATAGGAAACT
TAACTTCTTATTATTTGCATTAAGGATGAATTGTCAAAGAATAAAATTTG
TGAGAACAGGACAACAAttcactttttatctttttcacagaattttaCAT
GCAAAAAAGGGGACTGTAGAAATTTTGAGTATGACATTTTCTGTGgaccc
ctccccctgtacgcaagcatgtGCTCTTGACCAAACACCCCCtaccccct
tagtgcgtacatactatatggatggccccacGTTGCATTAcaccaacaga
aaaaatattttttgtgtccCACACCTATAAAGTAAAACTTCAATTAATGT
GATTATGAAANAAAGTAAAACCCCAATTAATGtgattatgaaaattttgt
ctgcaaaatttctttaacttttattttctcatAGATTTTTATTTGAGTAG
TTTATATGGgagtttcaaagattttctttacttttctttttttaatatgt
GGACAGACAGAACATTCTTTGAAGGTCTATTTACATTTTTACATCTTTTC
AGTACATTCATTTTGCCATTTTAGGTCTGTCAGTTCCTGTCTGGCCGAGG
AGTGGACACTCGAATCATTGAAAACTTCAGGCAAAATGAGGTAATTTACT
TTAACTTTAGTTAGATATTTGCTTTGTTGAATCAGAGGCCATATTTTGAA
AGTGGTAGGGCCAAGGTTTCATAGTTTCATTTAGCAagggtgttaaaagt
atgactttcctaagggAGGTTGACAGTTAATGGGGGGGTCTTctttccta
aggggggtcttcttagataAGGGGGATCTTCGTTGAATTATGACTCTTGT
ACAATcgtttcatttatactgataattgtcattttttaaatgaatttcct
aaggggggttagcacttaagggggTCCTCTTAACTAaggggggggtcttg
acccctctagaaattATGGGTTTAGTGTCTAAAGAAGGCGAATGACTTGA
AAATTGTTCAGCGTGAAACTGACAGTAAGTGTgtacattttttttacttt
tacaaataaaattatgGAAATTTATAAAAGGATTATGAATTGATCAAAGG
AAAAGCTTGAAGTTCGACTAAGCAACTTGGAAAAccttgaaagtgaaagt
aatggAAGGAATTCCTTGAAACCTTTAACAGGTGCATGATTGTGACAGTA
TGGTTGTCTTGTTTTGGTTTGCGTTCTCACTGAAGTTGTGGTCtatgcta
aagctctaaaaattttcttgctccCTTTGCTCGcattgatttttttccaa
acaaaatATAATACTGCTAAATAGTCCATGAATCTTGCAACACagtgata
aataaatttgagttTTGAATACCTCGAAATAGCAGTGGGCTATAaccttt
ttttccaaaataagcTGCTCCAATTTTTTTGGTCAGTTTGGACCCAAATA
ACACAAATCAAatgttttttgatgttttcaatttttggcgGTTCTTAGGT
CTTTATGCCCAAAATGGGCCCTGTTCNNNNNNNNNNNNNNNNNNNNNNNN
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atttgattattaatTTTTCATTGCTAAAAATGTTGTTTCTTGAAAAACTG
GGCCcaattttaccttttttataagcacatcatCAATTATTTTATTAGCT
AAACCTAAAGGTTAAACCTTTCCCACGAGCaacatttttttgaagaatat
caaaaatttcaaacttttattttgaaaccCAAAACTTTGAAGTGCCGTTA
ATAAAACTTAGCTTGCGAGTTAGATAATGGTTTTTCTTTCTTAATGCGTT
TGGTTTATGTCCTTTTGAATCAAGTGGTTAGGAGCTACATTCTTGAGTCT
GGGACTTGGTATACGAGCTCATTTTGGGCGTACGTTTGGGTCGGAAGGGT
TTATTGCTTTGAGGCTCCTTTAGTAACTTATTTACTATGAGGCGACAAAT
gacatttttaaatatttttcattttgtcatagATGACAAAGGAGGCAGTC
TGGAATGCAACAAATAGTGACTTAAACAATCTAGGTCTGAAGAAACAAGG
ACATATAATATGCCTGAAGACATTCTGTCATGTAACAAACTCACCCAAAG
GCAAACTGATTGAATCGATTAAAGATGCAGGAAGATCAAGAGTAGTTAAC
AGAAGAAAAGCCAGTAACAAAACTGTGTATATTGGTTGGTTGCATTACTG
TccaagacaaagaaaatttgtttcTATTCGTGGACAAAAAGGCGGAATAA
GGAGATTGAAATTATCACCAAATACAACGCTTCGGGAACTTAGGTTCAAA
GCGAAAagtatctttttcaaaaatggaaaGTCGAAAAAAGGAAAAGCTAG
CTCCATGATGTTCTACCTTGGATACTATGATAATGAACTAAtcgatgatg
aagatgaagatcaAACTCTTGAAGAGTACATAAATACCCATAAATATCCT
AAGGTACGTCTTTATTTAATGTCAAAACCTATCGCATACGTAACTCACTC
ATTAGAGTCAGACTCTGAAGGTTCAATCCACAATGATTCAATTGGACATG
ACGGAGATTCAAATAATCCAATCGAACATGAGGGTGGTTCAAATCCAATT
GGACATGACGGTAGTTCAAATATAATTAGAAATGACGGAGATTCAAATGC
AATCAGACAAAACAGACTTGAAAATCTGCCAGAGGAGCCGAACTTATTAG
ACGAACATAATGTTATTAGTGTCAATGTTGGTGGAATTATTCGAAGAAGG
TTGTTTTCCGCTCTTGCCAGAGTCAGGGAGGTTTATAACTGGGTAGGATC
GATGCCCGATGTTCCTCTACATTTCAACCTTATCTACAACCAATCAGTCT
TGGATCTAGATAATTTCGCCTCTAACTATTCACAATTGTTACTTGATATC
GAGGAAATTAGAAATACTTCGACCAGAAATGATTCAGAAGAACCACAAGA
AGAAACTCTTGAACTTGCTGAAAATGTCTTCCAAGCAACAGCTGACCACA
ATGAAAATGCTTCTCAAGCAACACCAGAAATTGTTCAAGAAAATGCCGAC
CCGAGTATCGTTTTAGAAGAGGACAATGATTCCTTAAAAGTTGATAGGTA
AGTAAATATTAGGTAATCTAAATGAAAATTAAGACTGAAAATTGTACCTA
CTAGTGCGTATGATCAgcaattttaaaagcatttGGAGGGCTTAGCAAAA
TTGTacgtctattgtttaaatgatgTCATTTATATCATTTATATTGTTCT
CTGTGTACAAGGGGAGAGGGGTTTTTTCAGTGATATTTCATTTTTCGCAA
AATAAGGCTTTTTCGAAAGAGTATTTTGTCgaattttctttataataacT
TTTGAACACGTTAACTAGATTTAAAGTATGATAGCTCAAGATTTAGTTAG
AATAAGTTAGCCTTTCCTGTTTCTGACGgtgaaaaatttagatttataac
atttttaattttcacacgatcttaaaattcaaacttgtacactttttttt
gaaacgCCCGGTACATGAATGACCCTTATTAATGGGCTTAGTCAATTATA
TTCTAGGTACGATATCGTGGAATCCCTTTTCAAATTGTATCGAAATGACA
ACTCATTGGAAGAAAGAGAAAACTTAACTATTGGCTACATAAATGAATCT
GGTGTCGGTGAAGGCGTTATCAAAGATGTTTATTCATCTTTCTTTGCCGA
ACTTGCGAAAATGCAAAGCTCAGGGCTTTTTGAATCGGTTCCTTCGAGTC
TGACTGAAGAAGAGGCACGATTGCTTGGAAGGATAATTTCACATGCCTAC
TCCAAGTTTAGAGTTTTCCCATTTCAAATGGCAAAAGCGTTTATTGAAAT
GCTGTTGTTCGATCATGTCCGGGATACAACTTTAATagaatcctaccaaa
acttccTTATGGTCAACGAGAGTAAaattctcgtaaaatgtttgaGAGGA
AATGATTTAAATCAAGAAGAAACAGACGACCTGTGGGCCGCTTTGAATGA
AAGTAACATAAGAGCAAAAcccaaaaaggaaaatattcacGCACTGGTTA
TCAAAGCAGCTAAATACGAATTCATTCAAAAACACTTTTATATCATGAAG
GGAATACAAAAGGTAATAAAAGAAACTAACGCATTGAACTTTGGTTTGAT
TGATGATATGGATGCTTTCTATGCCTCGGCCATGCCGACCGTAAGTAACG
TCCTGGAATATGTTTCTTTCGATTGCAAGAATCCCTCAGAGGAGAGGGTA
CAATTTTATTTCGAACGATATGTTCGGTCCTGTAACCGAACACAATTAAT
AAAATTGATCCAATATGCAACAGGATCTAACACGATTTCATCTGTGGGAA
CCGTTAAGGTTTCGTTCGTCAATCAGGAGAAGAATCTTAAGATAAGAGCA
AaatcttgttttaaaattttatatttaccAAGACAAATAAAGGATATGAA
TGTATTTAATGGTTTGATGGCAGAAATAATGGATAGAACTGATGTGTGGG
AGCTTCATGATGAGTGGGAGCTTCGGGGTGATGAATAAGAATGGTTTAGT
GAACATTACATTGAACGATTGAACGATCTGTCTTAAGTTTAAAATTCATG
TTTTGTAGTTATAGCTTTTCAATACTTTAACCGCCAAAGGTTTCTACCCT
CTGTAGTGGTAGTAGGGGGGGGCATAATCGaccttttttcgattttttac
cTTAACATTTTTTGGGTGCTGATTCCGAAAATCATACTCATTTTGGTTGA
AAATCAATATTCAGCTTACTACCCTATGCAGCAAGTTGGCCAAAATGCCC
CAAAATAGGCATTTCTGTGTGGAGCTTGTACCCAATGTTTTATTACTATT
TCTAGGTAATGTATTATTTTCTTTGGTCCAAAGGCTTCCGAATAGGCCAC
TGATGATGTCACAAGCCAACGTTGTCCTTATTCTAGTATTCTAGTCAAcc
tggtttgatttttt

Coding sequence (CDS) from alignment at scaffold_330:464433..474146+

>TCONS_00059709 ID=TCONS_00059709|Name=TCONS_00059709|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at scaffold_330:464433..474146+ (Clytia hemisphaerica)
AGTCAGGTCAGCATCCTGATGGCAGAAGCAGAAATGTCAGAAGTGGAAGA
GGTCTGTCAGTTCCTGTCTGGCCGAGGAGTGGACACTCGAATCATTGAAA
ACTTCAGGCAAAATGAGATGACAAAGGAGGCAGTCTGGAATGCAACAAAT
AGTGACTTAAACAATCTAGGTCTGAAGAAACAAGGACATATAATATGCCT
GAAGACATTCTGTCATGTAACAAACTCACCCAAAGGCAAACTGATTGAAT
CGATTAAAGATGCAGGAAGATCAAGAGTAGTTAACAGAAGAAAAGCCAGT
AACAAAACTGTGTATATTGGTTGGTTGCATTACTGTccaagacaaagaaa
atttgtttcTATTCGTGGACAAAAAGGCGGAATAAGGAGATTGAAATTAT
CACCAAATACAACGCTTCGGGAACTTAGGTTCAAAGCGAAAagtatcttt
ttcaaaaatggaaaGTCGAAAAAAGGAAAAGCTAGCTCCATGATGTTCTA
CCTTGGATACTATGATAATGAACTAAtcgatgatgaagatgaagatcaAA
CTCTTGAAGAGTACATAAATACCCATAAATATCCTAAGGTACGTCTTTAT
TTAATGTCAAAACCTATCGCATACGTAACTCACTCATTAGAGTCAGACTC
TGAAGGTTCAATCCACAATGATTCAATTGGACATGACGGAGATTCAAATA
ATCCAATCGAACATGAGGGTGGTTCAAATCCAATTGGACATGACGGTAGT
TCAAATATAATTAGAAATGACGGAGATTCAAATGCAATCAGACAAAACAG
ACTTGAAAATCTGCCAGAGGAGCCGAACTTATTAGACGAACATAATGTTA
TTAGTGTCAATGTTGGTGGAATTATTCGAAGAAGGTTGTTTTCCGCTCTT
GCCAGAGTCAGGGAGGTTTATAACTGGGTAGGATCGATGCCCGATGTTCC
TCTACATTTCAACCTTATCTACAACCAATCAGTCTTGGATCTAGATAATT
TCGCCTCTAACTATTCACAATTGTTACTTGATATCGAGGAAATTAGAAAT
ACTTCGACCAGAAATGATTCAGAAGAACCACAAGAAGAAACTCTTGAACT
TGCTGAAAATGTCTTCCAAGCAACAGCTGACCACAATGAAAATGCTTCTC
AAGCAACACCAGAAATTGTTCAAGAAAATGCCGACCCGAGTATCGTTTTA
GAAGAGGACAATGATTCCTTAAAAGTTGATAGGTACGATATCGTGGAATC
CCTTTTCAAATTGTATCGAAATGACAACTCATTGGAAGAAAGAGAAAACT
TAACTATTGGCTACATAAATGAATCTGGTGTCGGTGAAGGCGTTATCAAA
GATGTTTATTCATCTTTCTTTGCCGAACTTGCGAAAATGCAAAGCTCAGG
GCTTTTTGAATCGGTTCCTTCGAGTCTGACTGAAGAAGAGGCACGATTGC
TTGGAAGGATAATTTCACATGCCTACTCCAAGTTTAGAGTTTTCCCATTT
CAAATGGCAAAAGCGTTTATTGAAATGCTGTTGTTCGATCATGTCCGGGA
TACAACTTTAATagaatcctaccaaaacttccTTATGGTCAACGAGAGTA
AaattctcgtaaaatgtttgaGAGGAAATGATTTAAATCAAGAAGAAACA
GACGACCTGTGGGCCGCTTTGAATGAAAGTAACATAAGAGCAAAAcccaa
aaaggaaaatattcacGCACTGGTTATCAAAGCAGCTAAATACGAATTCA
TTCAAAAACACTTTTATATCATGAAGGGAATACAAAAGGTAATAAAAGAA
ACTAACGCATTGAACTTTGGTTTGATTGATGATATGGATGCTTTCTATGC
CTCGGCCATGCCGACCGTAAGTAACGTCCTGGAATATGTTTCTTTCGATT
GCAAGAATCCCTCAGAGGAGAGGGTACAATTTTATTTCGAACGATATGTT
CGGTCCTGTAACCGAACACAATTAATAAAATTGATCCAATATGCAACAGG
ATCTAACACGATTTCATCTGTGGGAACCGTTAAGGTTTCGTTCGTCAATC
AGGAGAAGAATCTTAAGATAAGAGCAAaatcttgttttaaaattttatat
ttaccAAGACAAATAAAGGATATGAATGTATTTAATGGTTTGATGGCAGA
AATAATGGATAGAACTGATGTGTGGGAGCTTCATGATGAGTGGGAGCTTC
GGGGTGATGAATAAAGTCAGGTCAGCATCCTGATGGCAGAAGCAGAAATG
TCAGAAGTGGAAGAGGTCTGTCAGTTCCTGTCTGGCCGAGGAGTGGACAC
TCGAATCATTGAAAACTTCAGGCAAAATGAGATGACAAAGGAGGCAGTCT
GGAATGCAACAAATAGTGACTTAAACAATCTAGGTCTGAAGAAACAAGGA
CATATAATATGCCTGAAGACATTCTGTCATGTAACAAACTCACCCAAAGG
CAAACTGATTGAATCGATTAAAGATGCAGGAAGATCAAGAGTAGTTAACA
GAAGAAAAGCCAGTAACAAAACTGTGTATATTGGTTGGTTGCATTACTGT
ccaagacaaagaaaatttgtttcTATTCGTGGACAAAAAGGCGGAATAAG
GAGATTGAAATTATCACCAAATACAACGCTTCGGGAACTTAGGTTCAAAG
CGAAAagtatctttttcaaaaatggaaaGTCGAAAAAAGGAAAAGCTAGC
TCCATGATGTTCTACCTTGGATACTATGATAATGAACTAAtcgatgatga
agatgaagatcaAACTCTTGAAGAGTACATAAATACCCATAAATATCCTA
AGGTACGTCTTTATTTAATGTCAAAACCTATCGCATACGTAACTCACTCA
TTAGAGTCAGACTCTGAAGGTTCAATCCACAATGATTCAATTGGACATGA
CGGAGATTCAAATAATCCAATCGAACATGAGGGTGGTTCAAATCCAATTG
GACATGACGGTAGTTCAAATATAATTAGAAATGACGGAGATTCAAATGCA
ATCAGACAAAACAGACTTGAAAATCTGCCAGAGGAGCCGAACTTATTAGA
CGAACATAATGTTATTAGTGTCAATGTTGGTGGAATTATTCGAAGAAGGT
TGTTTTCCGCTCTTGCCAGAGTCAGGGAGGTTTATAACTGGGTAGGATCG
ATGCCCGATGTTCCTCTACATTTCAACCTTATCTACAACCAATCAGTCTT
GGATCTAGATAATTTCGCCTCTAACTATTCACAATTGTTACTTGATATCG
AGGAAATTAGAAATACTTCGACCAGAAATGATTCAGAAGAACCACAAGAA
GAAACTCTTGAACTTGCTGAAAATGTCTTCCAAGCAACAGCTGACCACAA
TGAAAATGCTTCTCAAGCAACACCAGAAATTGTTCAAGAAAATGCCGACC
CGAGTATCGTTTTAGAAGAGGACAATGATTCCTTAAAAGTTGATAGGTAC
GATATCGTGGAATCCCTTTTCAAATTGTATCGAAATGACAACTCATTGGA
AGAAAGAGAAAACTTAACTATTGGCTACATAAATGAATCTGGTGTCGGTG
AAGGCGTTATCAAAGATGTTTATTCATCTTTCTTTGCCGAACTTGCGAAA
ATGCAAAGCTCAGGGCTTTTTGAATCGGTTCCTTCGAGTCTGACTGAAGA
AGAGGCACGATTGCTTGGAAGGATAATTTCACATGCCTACTCCAAGTTTA
GAGTTTTCCCATTTCAAATGGCAAAAGCGTTTATTGAAATGCTGTTGTTC
GATCATGTCCGGGATACAACTTTAATagaatcctaccaaaacttccTTAT
GGTCAACGAGAGTAAaattctcgtaaaatgtttgaGAGGAAATGATTTAA
ATCAAGAAGAAACAGACGACCTGTGGGCCGCTTTGAATGAAAGTAACATA
AGAGCAAAAcccaaaaaggaaaatattcacGCACTGGTTATCAAAGCAGC
TAAATACGAATTCATTCAAAAACACTTTTATATCATGAAGGGAATACAAA
AGGTAATAAAAGAAACTAACGCATTGAACTTTGGTTTGATTGATGATATG
GATGCTTTCTATGCCTCGGCCATGCCGACCGTAAGTAACGTCCTGGAATA
TGTTTCTTTCGATTGCAAGAATCCCTCAGAGGAGAGGGTACAATTTTATT
TCGAACGATATGTTCGGTCCTGTAACCGAACACAATTAATAAAATTGATC
CAATATGCAACAGGATCTAACACGATTTCATCTGTGGGAACCGTTAAGGT
TTCGTTCGTCAATCAGGAGAAGAATCTTAAGATAAGAGCAAaatcttgtt
ttaaaattttatatttaccAAGACAAATAAAGGATATGAATGTATTTAAT
GGTTTGATGGCAGAAATAATGGATAGAACTGATGTGTGGGAGCTTCATGA
TGAGTGGGAGCTTCGGGGTGATGAATAAAGTCAGGTCAGCATCCTGATGG
CAGAAGCAGAAATGTCAGAAGTGGAAGAGGTCTGTCAGTTCCTGTCTGGC
CGAGGAGTGGACACTCGAATCATTGAAAACTTCAGGCAAAATGAGATGAC
AAAGGAGGCAGTCTGGAATGCAACAAATAGTGACTTAAACAATCTAGGTC
TGAAGAAACAAGGACATATAATATGCCTGAAGACATTCTGTCATGTAACA
AACTCACCCAAAGGCAAACTGATTGAATCGATTAAAGATGCAGGAAGATC
AAGAGTAGTTAACAGAAGAAAAGCCAGTAACAAAACTGTGTATATTGGTT
GGTTGCATTACTGTccaagacaaagaaaatttgtttcTATTCGTGGACAA
AAAGGCGGAATAAGGAGATTGAAATTATCACCAAATACAACGCTTCGGGA
ACTTAGGTTCAAAGCGAAAagtatctttttcaaaaatggaaaGTCGAAAA
AAGGAAAAGCTAGCTCCATGATGTTCTACCTTGGATACTATGATAATGAA
CTAAtcgatgatgaagatgaagatcaAACTCTTGAAGAGTACATAAATAC
CCATAAATATCCTAAGGTACGTCTTTATTTAATGTCAAAACCTATCGCAT
ACGTAACTCACTCATTAGAGTCAGACTCTGAAGGTTCAATCCACAATGAT
TCAATTGGACATGACGGAGATTCAAATAATCCAATCGAACATGAGGGTGG
TTCAAATCCAATTGGACATGACGGTAGTTCAAATATAATTAGAAATGACG
GAGATTCAAATGCAATCAGACAAAACAGACTTGAAAATCTGCCAGAGGAG
CCGAACTTATTAGACGAACATAATGTTATTAGTGTCAATGTTGGTGGAAT
TATTCGAAGAAGGTTGTTTTCCGCTCTTGCCAGAGTCAGGGAGGTTTATA
ACTGGGTAGGATCGATGCCCGATGTTCCTCTACATTTCAACCTTATCTAC
AACCAATCAGTCTTGGATCTAGATAATTTCGCCTCTAACTATTCACAATT
GTTACTTGATATCGAGGAAATTAGAAATACTTCGACCAGAAATGATTCAG
AAGAACCACAAGAAGAAACTCTTGAACTTGCTGAAAATGTCTTCCAAGCA
ACAGCTGACCACAATGAAAATGCTTCTCAAGCAACACCAGAAATTGTTCA
AGAAAATGCCGACCCGAGTATCGTTTTAGAAGAGGACAATGATTCCTTAA
AAGTTGATAGGTACGATATCGTGGAATCCCTTTTCAAATTGTATCGAAAT
GACAACTCATTGGAAGAAAGAGAAAACTTAACTATTGGCTACATAAATGA
ATCTGGTGTCGGTGAAGGCGTTATCAAAGATGTTTATTCATCTTTCTTTG
CCGAACTTGCGAAAATGCAAAGCTCAGGGCTTTTTGAATCGGTTCCTTCG
AGTCTGACTGAAGAAGAGGCACGATTGCTTGGAAGGATAATTTCACATGC
CTACTCCAAGTTTAGAGTTTTCCCATTTCAAATGGCAAAAGCGTTTATTG
AAATGCTGTTGTTCGATCATGTCCGGGATACAACTTTAATagaatcctac
caaaacttccTTATGGTCAACGAGAGTAAaattctcgtaaaatgtttgaG
AGGAAATGATTTAAATCAAGAAGAAACAGACGACCTGTGGGCCGCTTTGA
ATGAAAGTAACATAAGAGCAAAAcccaaaaaggaaaatattcacGCACTG
GTTATCAAAGCAGCTAAATACGAATTCATTCAAAAACACTTTTATATCAT
GAAGGGAATACAAAAGGTAATAAAAGAAACTAACGCATTGAACTTTGGTT
TGATTGATGATATGGATGCTTTCTATGCCTCGGCCATGCCGACCGTAAGT
AACGTCCTGGAATATGTTTCTTTCGATTGCAAGAATCCCTCAGAGGAGAG
GGTACAATTTTATTTCGAACGATATGTTCGGTCCTGTAACCGAACACAAT
TAATAAAATTGATCCAATATGCAACAGGATCTAACACGATTTCATCTGTG
GGAACCGTTAAGGTTTCGTTCGTCAATCAGGAGAAGAATCTTAAGATAAG
AGCAAaatcttgttttaaaattttatatttaccAAGACAAATAAAGGATA
TGAATGTATTTAATGGTTTGATGGCAGAAATAATGGATAGAACTGATGTG
TGGGAGCTTCATGATGAGTGGGAGCTTCGGGGTGATGAATAAAGTCAGGT
CAGCATCCTGATGGCAGAAGCAGAAATGTCAGAAGTGGAAGAGGTCTGTC
AGTTCCTGTCTGGCCGAGGAGTGGACACTCGAATCATTGAAAACTTCAGG
CAAAATGAGATGACAAAGGAGGCAGTCTGGAATGCAACAAATAGTGACTT
AAACAATCTAGGTCTGAAGAAACAAGGACATATAATATGCCTGAAGACAT
TCTGTCATGTAACAAACTCACCCAAAGGCAAACTGATTGAATCGATTAAA
GATGCAGGAAGATCAAGAGTAGTTAACAGAAGAAAAGCCAGTAACAAAAC
TGTGTATATTGGTTGGTTGCATTACTGTccaagacaaagaaaatttgttt
cTATTCGTGGACAAAAAGGCGGAATAAGGAGATTGAAATTATCACCAAAT
ACAACGCTTCGGGAACTTAGGTTCAAAGCGAAAagtatctttttcaaaaa
tggaaaGTCGAAAAAAGGAAAAGCTAGCTCCATGATGTTCTACCTTGGAT
ACTATGATAATGAACTAAtcgatgatgaagatgaagatcaAACTCTTGAA
GAGTACATAAATACCCATAAATATCCTAAGGTACGTCTTTATTTAATGTC
AAAACCTATCGCATACGTAACTCACTCATTAGAGTCAGACTCTGAAGGTT
CAATCCACAATGATTCAATTGGACATGACGGAGATTCAAATAATCCAATC
GAACATGAGGGTGGTTCAAATCCAATTGGACATGACGGTAGTTCAAATAT
AATTAGAAATGACGGAGATTCAAATGCAATCAGACAAAACAGACTTGAAA
ATCTGCCAGAGGAGCCGAACTTATTAGACGAACATAATGTTATTAGTGTC
AATGTTGGTGGAATTATTCGAAGAAGGTTGTTTTCCGCTCTTGCCAGAGT
CAGGGAGGTTTATAACTGGGTAGGATCGATGCCCGATGTTCCTCTACATT
TCAACCTTATCTACAACCAATCAGTCTTGGATCTAGATAATTTCGCCTCT
AACTATTCACAATTGTTACTTGATATCGAGGAAATTAGAAATACTTCGAC
CAGAAATGATTCAGAAGAACCACAAGAAGAAACTCTTGAACTTGCTGAAA
ATGTCTTCCAAGCAACAGCTGACCACAATGAAAATGCTTCTCAAGCAACA
CCAGAAATTGTTCAAGAAAATGCCGACCCGAGTATCGTTTTAGAAGAGGA
CAATGATTCCTTAAAAGTTGATAGGTACGATATCGTGGAATCCCTTTTCA
AATTGTATCGAAATGACAACTCATTGGAAGAAAGAGAAAACTTAACTATT
GGCTACATAAATGAATCTGGTGTCGGTGAAGGCGTTATCAAAGATGTTTA
TTCATCTTTCTTTGCCGAACTTGCGAAAATGCAAAGCTCAGGGCTTTTTG
AATCGGTTCCTTCGAGTCTGACTGAAGAAGAGGCACGATTGCTTGGAAGG
ATAATTTCACATGCCTACTCCAAGTTTAGAGTTTTCCCATTTCAAATGGC
AAAAGCGTTTATTGAAATGCTGTTGTTCGATCATGTCCGGGATACAACTT
TAATagaatcctaccaaaacttccTTATGGTCAACGAGAGTAAaattctc
gtaaaatgtttgaGAGGAAATGATTTAAATCAAGAAGAAACAGACGACCT
GTGGGCCGCTTTGAATGAAAGTAACATAAGAGCAAAAcccaaaaaggaaa
atattcacGCACTGGTTATCAAAGCAGCTAAATACGAATTCATTCAAAAA
CACTTTTATATCATGAAGGGAATACAAAAGGTAATAAAAGAAACTAACGC
ATTGAACTTTGGTTTGATTGATGATATGGATGCTTTCTATGCCTCGGCCA
TGCCGACCGTAAGTAACGTCCTGGAATATGTTTCTTTCGATTGCAAGAAT
CCCTCAGAGGAGAGGGTACAATTTTATTTCGAACGATATGTTCGGTCCTG
TAACCGAACACAATTAATAAAATTGATCCAATATGCAACAGGATCTAACA
CGATTTCATCTGTGGGAACCGTTAAGGTTTCGTTCGTCAATCAGGAGAAG
AATCTTAAGATAAGAGCAAaatcttgttttaaaattttatatttaccAAG
ACAAATAAAGGATATGAATGTATTTAATGGTTTGATGGCAGAAATAATGG
ATAGAACTGATGTGTGGGAGCTTCATGATGAGTGGGAGCTTCGGGGTGAT
GAATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037562	XLOC_037562	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059709-exon-scaffold_330-1491911889:464433..464483	TCONS_00059709-exon-scaffold_330-1491911889:464433..464483	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1510915933:464433..464483	TCONS_00059709-exon-scaffold_330-1510915933:464433..464483	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1575043694:464433..464483	TCONS_00059709-exon-scaffold_330-1575043694:464433..464483	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1491911889:466757..466822	TCONS_00059709-exon-scaffold_330-1491911889:466757..466822	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1510915933:466757..466822	TCONS_00059709-exon-scaffold_330-1510915933:466757..466822	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1575043694:466757..466822	TCONS_00059709-exon-scaffold_330-1575043694:466757..466822	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1491911889:471165..472279	TCONS_00059709-exon-scaffold_330-1491911889:471165..472279	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1510915933:471165..472279	TCONS_00059709-exon-scaffold_330-1510915933:471165..472279	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1575043694:471165..472279	TCONS_00059709-exon-scaffold_330-1575043694:471165..472279	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1491911889:472739..474146	TCONS_00059709-exon-scaffold_330-1491911889:472739..474146	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1510915933:472739..474146	TCONS_00059709-exon-scaffold_330-1510915933:472739..474146	Clytia hemisphaerica	exon
TCONS_00059709-exon-scaffold_330-1575043694:472739..474146	TCONS_00059709-exon-scaffold_330-1575043694:472739..474146	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059709-protein	TCONS_00059709-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_330	supercontig	scaffold_330:464433..474146 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0284627	0.0330479	0.0161661	0.373933	0.295487	0.712984	0.895838	0.609195	0.731186	1.18285	1.07886	0.57265	0.755978	0.0165738	0.0183623	0.0109556	0	0	0	0.0141102	0.0206474	0	0.0152128	0.846116	0.783106	0	0	0.0161981	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000569	HECT_dom
IPR001660	SAM
IPR013761	SAM/pointed

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00059709 vs. Swiss-Prot (Human)

BLAST of TCONS_00059709 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00059709 (transcript) - C. hemisphaerica