TCONS_00059698 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059698
Unique Name	TCONS_00059698
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1619

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_330:403743..407910+
coding sequence from alignment at scaffold_330:403743..407910+

transcript sequence

>TCONS_00059698 ID=TCONS_00059698|Name=TCONS_00059698|organism=Clytia hemisphaerica|type=transcript|length=1619bp
TCAATAGAAAATATATGAAATGAAATAATAATACAGAATGGTGACTGTGA
TCTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGATGCATTG
ACAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGG
AATATTAGATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTTGTTATA
TCTATTGTAGTAAAGAAGAAACCGAAAAGAGAGGTTCAGGATTTTTTGCG
CTTATCACCTTGAGTGGTACTGAGCACAAAGTCATCATTACAAACAATCA
CGTGCTTTGCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATT
ACGAAGGGAAATTACCTGGTGCTGATATCCGTTTGAAACCAGAACTGATG
TTCCATACCAATGATgtctTAGATTACACCATCATTGGATGTGATGCCGA
TACAATCGAAAACCGTTTCTGTATCGATCCCATCGAATTTACTGAGGAAG
ATCCCATGAGCGTCGGAGATGATATTTTCATCTTTCAACATCCTAAAGGT
GATACCAAGAAATTCAGCTACCAGAAAATCTCCAGAATCGAACGCCCGTA
TGTTTATTATAATGCTGACACCGATATCGGTTCGTCTGGCTCTGTAGTTC
TTCGTAAGTTCAAACTGATAGCGGTACATTCAAAAGGTAGTGATTTGTTG
CAGTATAACAAAGGCACGCTGTGTAGTGAGATTTTACATCATTTACGCAC
GGGTACATATACACAACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaa
aaaagaaacgaaaatcTGACGTCTTAGgaGAATTAGAAACAGCTAACAAA
CGATCACGTGACACGGAGAACACCTTACAACAAAACACTTTCAATGATCA
TCACATAAACACCGTCAAACCAACTGAAGACCAACTAGCTGACCTTTCCA
AGGAAATTGTGGCTTACTGGAAACATTTAgcaagaaaattgaaactacCG
AACTGTGAGGTGCAACGTATACAAAAAGACCATGTCAATTATGATGACAT
TACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTGATACAA
ATGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAA
GACACAGCTGTCAGACATTTCCCAATGTAGAATTGCTTCTCTCTTGAAAT
AGATCGAGattaaaagctattttaaagGGGAGTAgaacaaatattttaga
atttgCCTTTTATGACAAAAATTGGACCCTGAGGTTCTTAGCCAAGAATG
GCATGGCAACGGAACcagttattttatatttttaacacAAATTTTATTCA
CACTTACACTCTACGCACCTTAGAAGAATATTGTTTTATTCTAACTTTTT
ATTTCGctattgtttttttgttgttttgtacaTAATATCGTATTTATAAT
AGCTATGTATTATACcatttttgaaagtctttattattatattataaacC
TTATACTATGCTTACAGGTAGTTcaactttttactttttgtaCATAATAT
TAAACTTTAGACAATATTATAAGAAAACACGGTATAGAAAAGACTATATT
GTTATAAGCCTTATAAATA

Run BLAST on NCBI

protein sequence of TCONS_00059698-protein

>TCONS_00059698-protein ID=TCONS_00059698-protein|Name=TCONS_00059698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MVTVISTSNKACSNQKNGDALTNNDHERKEVLLNHGDGILDAGLLTKSKN
AVCYIYCSKEETEKRGSGFFALITLSGTEHKVIITNNHVLCNKEEAACAV
ARFHYEGKLPGADIRLKPELMFHTNDVLDYTIIGCDADTIENRFCIDPIE
FTEEDPMSVGDDIFIFQHPKGDTKKFSYQKISRIERPYVYYNADTDIGSS
GSVVLRKFKLIAVHSKGSDLLQYNKGTLCSEILHHLRTGTYTQPASFSSE
SACQKKKRKSDVLGELETANKRSRDTENTLQQNTFNDHHINTVKPTEDQL
ADLSKEIVAYWKHLARKLKLPNCEVQRIQKDHVNYDDITEKANAMLLTWL
ELDTNAYVSTLRDALISLGKKDTAVRHFPM

Run BLAST on NCBI

transcript from alignment at scaffold_330:403743..407910+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059698 ID=TCONS_00059698|Name=TCONS_00059698|organism=Clytia hemisphaerica|type=transcript|length=4168bp|location=Sequence derived from alignment at scaffold_330:403743..407910+ (Clytia hemisphaerica)
TCAATAGAAAATATATGAAATGAAATAATAATACAGAATGGTGACTGTGA
TCTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGATGCATTG
ACAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGG
AATATTAGATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTTGTTATA
TCTATTGTAGTAAAGAAGAAACCGAAAAGTATGATAATAAGCTCATCAGT
TATTCCTTTTCTTAAATTGCTTCTTTGCTTATAAAGCTAGCAGCTACGTT
tgtatattattattatactgGGTGACCCAGAAAAAAAGTATAATGGTTCG
AGTTAACTGTGTCCAAAATAATGTgaatttttactttattcttTTTTAAC
AGTCAAGAggaaagacaaaataaaaatttggcaTATAGCTTTTGAAATTG
GTACAGTGGTTCTCAAGTTAAaagcttttgaagtcaaaattcactttaga
aaaacgttttctcaaaaaaggggtatcaaattatGCATTTGTTAACATTG
TCCACTAAACTCTTCTCGAAAAATCGCTCATAATTACTGTTTTCCTATTA
CCGCCATAATTTTTTGAGGATGATTTTTAAAAGTCAGCTGAGATCATTAA
TTGAGTCGTAAAAGTCATTAATATATTGAAACTATGAGGTTCCCTGAATA
GAATTGCGTTAACTTGATACCccatttttgacgtgtttttggactttttc
aaaagcAGATTTTTACTTCTAAAGCTTAAAACTTGAGAAccactgaacca
aatttaaaaagctgTATGCCTTTCCTCTTAACAATGACAAAAGAATTCAT
TAAAAGCTCACGTTATTTCGGACACAGTTAGTTTAGCTAACCCTTATACA
TTTTTTTGGTCACCCGGTATACTTCGCTTTAAGCATAATTGTCAATGTAA
ACTAACTTCCAGCTGGAAAAATCATATGTAGTTCGGATCCCCCGTTCTTT
AAGGGGAGAGATGACACTATCcgaaaaagtgaagaaggggatcagaaatt
ttcatgaaaaagtcaaaaagaagaaagaagtttattatttcgctttctct
ttctctaaagatatttcacatatatttgttagctatttttttCCAGAATC
CTTGGGGGATAGTCATGTTTAAAGGTTGGGGGAATGCGAAGAAGGTTGgg
atcgtttaagaaggggggggtcagacccctttcTGCACTatggaaaaatt
ttaattcttttatgGAACTATTTGTTTTAATGATCTGAACATGTTCCTGA
ATATGAATGCCAAGAAGAAATTTGACAAATCCACTTTTGATAACTGAATT
GTTTTGATAAATCTTCACTAGGAGAGGTTCAGGATTTTTTGCGCTTATCA
CCTTGAGTGGTACTGAGCACAAAGTCATCATTACAAACAATCACGTGCTT
TGCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATTACGAAGG
GAAATTACCTGGTGCTGATATCCGTTTGAAACCAGAACTGATGTTCCATA
CCAATGATGTAAGTGAAGAGCCACTATAACCTAAATGTCcccttaattcg
aacaagttttctcgtcacTGTAGCTATGCCTTACTCTATAAtatctataa
ctcgaaatttcctcaattttaacaaatttgtgttccctaAGTGGAAGAAA
CTCCACTGTATTGACACATGGCCCACTGTTCCTGTTATGTCAGGTTATGT
TCTTGTTTGGAAATAGCATTTATTTTGTTTCAGTTTATGATTATAGTTAT
TATAATTTTAcgattttagaaaaacttttttgtgtcATTTTACTATGTTT
ATACTGCTTAGGTTTTCGAATGACTTCACACTTTTAAATTTCCATTGCTT
CTATGGTAAGCAGTCTCTCatggtgaattttttttcaggtctTAGATTAC
ACCATCATTGGATGTGATGCCGATACAATCGAAAACCGTTTCTGTATCGA
TCCCATCGAATTTACTGAGGAAGATCCCATGAGCGTCGGAGATGATATTT
TCATCTTTCAACATCCTAAAGGTGATACCAAGAAATTCAGCTACCAGAAA
ATCTCCAGAATCGAACGCCCGTATGTTTATTATAATGCTGACACCGATAT
CGGTTCGTCTGGCTCTGTAGTTCTTCGTAAGTTCAAACTGATAGCGGTAC
ATTCAAAAGGTAGTGATTTGTTGCAGTATAACAAAGGCACGCTGTGTAGT
GAGATTTTACATCATTTACGCACGGGTACATGTAAGTAACTTGTTTTTAT
GTCCAAAATTTGCGTTGTGCTTTCTCCttcttttgttgaatttcacCTAC
TTGTTTCCTTGGTCTATCTTTAAAATGTCAACCCCTCTCCCTTTCGTCCT
TTAAAAAGGTAAGGTTTTAAGCACCCAAACGTATGTTCAATAGTGAAACA
AACTAGAAAAATCTTATGATTTCAAACCCCAGTAGCACTTTCAAATAACA
CACTCAGTTCTTGCGGGACTTAATATGTCACTCCCTTTTATGTTAGATAC
ACAACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaaaaaagaaacgaa
aatcTGACGTCTTAGGTATGTATGAGAAATGACTTAGTTCGCGTTTCATG
GCATTGAATGCTCTCTATGAAATGTTTCGAATGTTTAATAAATCACCATC
CAAATATTATGCTAATCTTTCTAAGCCCTTTATTATGCTTTAGCAATAAG
TCTCTACAACTACGTTAACAATTTTAGCATTTACTATAGCTCTTGTTTTA
GGTGTTCGGTGATTTGGTCTTCCGAGAAGGTCGTAAACGCTGCACCAGCA
TGCATCTCCTCTGATATGATTCGATaaaggggatgcgtatcgtctacAAT
ATTTCTGTCCCGACTTACCCCCgcctttcctttttcttttttgattaagT
GTCATAGCAATACAACGActtctttttgtctttgttcAATAAATGAAAAG
TTATAATTATAATGGATGTGACGAAATTATGCAAATTTATGCAACTTTTG
GGTAACTCTCGGTCGGACGAGAAattcatacacgatacgcaaCGCCTCTA
TCAAAATCAATTCCGGAGATGCGCGCAACCTAAGAAGGGCGATCAATTac
tcttatcggagtttttgatttttctaaaaaagcgatgcattgtgggattg
tttcgggagaattacttacaatagaattccctcgaggaattcctaagaga
tttctattgtaatactaccgaaacaatcccacaatacatcgcttttttag
aaaaaatcaacAACTCCGATAAAAGCACTTTTTTTAAGAGGGCTTCCGAG
acaaatttattgaatttatttttcaggaGAATTAGAAACAGCTAACAAAC
GATCACGTGACACGGAGAACACCTTACAACAAAACACTTTCAATGATCAT
CACATAAACACCGTCAAACCAACTGAAGACCAACTAGCTGACCTTTCCAA
GGAAATTGTGGCTTACTGGAAACATTTAgcaagaaaattgaaactacCGA
ACTGTGAGGTGCAACGTATACAAAAAGACCATGTCAATTATGATGACATT
ACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTGATACAAA
TGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAAG
ACACAGCTGTCAGACATTTCCCAATGTAGAATTGCTTCTCTCTTGAAATA
GATCGAGattaaaagctattttaaagGGGAGTAgaacaaatattttagaa
tttgCCTTTTATGACAAAAATTGGACCCTGAGGTTCTTAGCCAAGAATGG
CATGGCAACGGAACcagttattttatatttttaacacAAATTTTATTCAC
ACTTACACTCTACGCACCTTAGAAGAATATTGTTTTATTCTAACTTTTTA
TTTCGctattgtttttttgttgttttgtacaTAATATCGTATTTATAATA
GCTATGTATTATACcatttttgaaagtctttattattatattataaacCT
TATACTATGCTTACAGGTAGTTcaactttttactttttgtaCATAATATT
AAACTTTAGACAATATTATAAGAAAACACGGTATAGAAAAGACTATATTG
TTATAAGCCTTATAAATA

Coding sequence (CDS) from alignment at scaffold_330:403743..407910+

>TCONS_00059698 ID=TCONS_00059698|Name=TCONS_00059698|organism=Clytia hemisphaerica|type=CDS|length=5715bp|location=Sequence derived from alignment at scaffold_330:403743..407910+ (Clytia hemisphaerica)
ATGGTGACTGTGATCTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAA
TGGTGATGCATTGACAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAA
ATCATGGCGATGGAATATTAGATGCTGGACTTCTCACCAAATCTAAAAAT
GCTGTTTGTTATATCTATTGTAGTAAAGAAGAAACCGAAAAGAGAGGTTC
AGGATTTTTTGCGCTTATCACCTTGAGTGGTACTGAGCACAAAGTCATCA
TTACAAACAATCACGTGCTTTGCAATAAAGAAGAAGCCGCATGCGCAGTA
GCTCGTTTCCATTACGAAGGGAAATTACCTGGTGCTGATATCCGTTTGAA
ACCAGAACTGATGTTCCATACCAATGATgtctTAGATTACACCATCATTG
GATGTGATGCCGATACAATCGAAAACCGTTTCTGTATCGATCCCATCGAA
TTTACTGAGGAAGATCCCATGAGCGTCGGAGATGATATTTTCATCTTTCA
ACATCCTAAAGGTGATACCAAGAAATTCAGCTACCAGAAAATCTCCAGAA
TCGAACGCCCGTATGTTTATTATAATGCTGACACCGATATCGGTTCGTCT
GGCTCTGTAGTTCTTCGTAAGTTCAAACTGATAGCGGTACATTCAAAAGG
TAGTGATTTGTTGCAGTATAACAAAGGCACGCTGTGTAGTGAGATTTTAC
ATCATTTACGCACGGGTACATATACACAACCAGCCAGCTTTTCATCAGAA
TCTGCTTGTcaaaaaaagaaacgaaaatcTGACGTCTTAGgaGAATTAGA
AACAGCTAACAAACGATCACGTGACACGGAGAACACCTTACAACAAAACA
CTTTCAATGATCATCACATAAACACCGTCAAACCAACTGAAGACCAACTA
GCTGACCTTTCCAAGGAAATTGTGGCTTACTGGAAACATTTAgcaagaaa
attgaaactacCGAACTGTGAGGTGCAACGTATACAAAAAGACCATGTCA
ATTATGATGACATTACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTG
GAACTTGATACAAATGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAG
TTTGGGTAAAAAAGACACAGCTGTCAGACATTTCCCAATGTAGATGGTGA
CTGTGATCTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGAT
GCATTGACAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGG
CGATGGAATATTAGATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTT
GTTATATCTATTGTAGTAAAGAAGAAACCGAAAAGAGAGGTTCAGGATTT
TTTGCGCTTATCACCTTGAGTGGTACTGAGCACAAAGTCATCATTACAAA
CAATCACGTGCTTTGCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTT
TCCATTACGAAGGGAAATTACCTGGTGCTGATATCCGTTTGAAACCAGAA
CTGATGTTCCATACCAATGATgtctTAGATTACACCATCATTGGATGTGA
TGCCGATACAATCGAAAACCGTTTCTGTATCGATCCCATCGAATTTACTG
AGGAAGATCCCATGAGCGTCGGAGATGATATTTTCATCTTTCAACATCCT
AAAGGTGATACCAAGAAATTCAGCTACCAGAAAATCTCCAGAATCGAACG
CCCGTATGTTTATTATAATGCTGACACCGATATCGGTTCGTCTGGCTCTG
TAGTTCTTCGTAAGTTCAAACTGATAGCGGTACATTCAAAAGGTAGTGAT
TTGTTGCAGTATAACAAAGGCACGCTGTGTAGTGAGATTTTACATCATTT
ACGCACGGGTACATATACACAACCAGCCAGCTTTTCATCAGAATCTGCTT
GTcaaaaaaagaaacgaaaatcTGACGTCTTAGgaGAATTAGAAACAGCT
AACAAACGATCACGTGACACGGAGAACACCTTACAACAAAACACTTTCAA
TGATCATCACATAAACACCGTCAAACCAACTGAAGACCAACTAGCTGACC
TTTCCAAGGAAATTGTGGCTTACTGGAAACATTTAgcaagaaaattgaaa
ctacCGAACTGTGAGGTGCAACGTATACAAAAAGACCATGTCAATTATGA
TGACATTACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTG
ATACAAATGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGT
AAAAAAGACACAGCTGTCAGACATTTCCCAATGTAGATGGTGACTGTGAT
CTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGATGCATTGA
CAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGGA
ATATTAGATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTTGTTATAT
CTATTGTAGTAAAGAAGAAACCGAAAAGAGAGGTTCAGGATTTTTTGCGC
TTATCACCTTGAGTGGTACTGAGCACAAAGTCATCATTACAAACAATCAC
GTGCTTTGCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATTA
CGAAGGGAAATTACCTGGTGCTGATATCCGTTTGAAACCAGAACTGATGT
TCCATACCAATGATgtctTAGATTACACCATCATTGGATGTGATGCCGAT
ACAATCGAAAACCGTTTCTGTATCGATCCCATCGAATTTACTGAGGAAGA
TCCCATGAGCGTCGGAGATGATATTTTCATCTTTCAACATCCTAAAGGTG
ATACCAAGAAATTCAGCTACCAGAAAATCTCCAGAATCGAACGCCCGTAT
GTTTATTATAATGCTGACACCGATATCGGTTCGTCTGGCTCTGTAGTTCT
TCGTAAGTTCAAACTGATAGCGGTACATTCAAAAGGTAGTGATTTGTTGC
AGTATAACAAAGGCACGCTGTGTAGTGAGATTTTACATCATTTACGCACG
GGTACATATACACAACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaaa
aaagaaacgaaaatcTGACGTCTTAGgaGAATTAGAAACAGCTAACAAAC
GATCACGTGACACGGAGAACACCTTACAACAAAACACTTTCAATGATCAT
CACATAAACACCGTCAAACCAACTGAAGACCAACTAGCTGACCTTTCCAA
GGAAATTGTGGCTTACTGGAAACATTTAgcaagaaaattgaaactacCGA
ACTGTGAGGTGCAACGTATACAAAAAGACCATGTCAATTATGATGACATT
ACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTGATACAAA
TGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAAG
ACACAGCTGTCAGACATTTCCCAATGTAGATGGTGACTGTGATCTCTACT
TCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGATGCATTGACAAATAA
TGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGGAATATTAG
ATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTTGTTATATCTATTGT
AGTAAAGAAGAAACCGAAAAGAGAGGTTCAGGATTTTTTGCGCTTATCAC
CTTGAGTGGTACTGAGCACAAAGTCATCATTACAAACAATCACGTGCTTT
GCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATTACGAAGGG
AAATTACCTGGTGCTGATATCCGTTTGAAACCAGAACTGATGTTCCATAC
CAATGATgtctTAGATTACACCATCATTGGATGTGATGCCGATACAATCG
AAAACCGTTTCTGTATCGATCCCATCGAATTTACTGAGGAAGATCCCATG
AGCGTCGGAGATGATATTTTCATCTTTCAACATCCTAAAGGTGATACCAA
GAAATTCAGCTACCAGAAAATCTCCAGAATCGAACGCCCGTATGTTTATT
ATAATGCTGACACCGATATCGGTTCGTCTGGCTCTGTAGTTCTTCGTAAG
TTCAAACTGATAGCGGTACATTCAAAAGGTAGTGATTTGTTGCAGTATAA
CAAAGGCACGCTGTGTAGTGAGATTTTACATCATTTACGCACGGGTACAT
ATACACAACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaaaaaagaaa
cgaaaatcTGACGTCTTAGgaGAATTAGAAACAGCTAACAAACGATCACG
TGACACGGAGAACACCTTACAACAAAACACTTTCAATGATCATCACATAA
ACACCGTCAAACCAACTGAAGACCAACTAGCTGACCTTTCCAAGGAAATT
GTGGCTTACTGGAAACATTTAgcaagaaaattgaaactacCGAACTGTGA
GGTGCAACGTATACAAAAAGACCATGTCAATTATGATGACATTACTGAAA
AAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTGATACAAATGCTTAC
GTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAAGACACAGC
TGTCAGACATTTCCCAATGTAGATGGTGACTGTGATCTCTACTTCAAATA
AAGCTTGCTCAAACCAAAAGAATGGTGATGCATTGACAAATAATGATCAC
GAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGGAATATTAGATGCTGG
ACTTCTCACCAAATCTAAAAATGCTGTTTGTTATATCTATTGTAGTAAAG
AAGAAACCGAAAAGAGAGGTTCAGGATTTTTTGCGCTTATCACCTTGAGT
GGTACTGAGCACAAAGTCATCATTACAAACAATCACGTGCTTTGCAATAA
AGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATTACGAAGGGAAATTAC
CTGGTGCTGATATCCGTTTGAAACCAGAACTGATGTTCCATACCAATGAT
gtctTAGATTACACCATCATTGGATGTGATGCCGATACAATCGAAAACCG
TTTCTGTATCGATCCCATCGAATTTACTGAGGAAGATCCCATGAGCGTCG
GAGATGATATTTTCATCTTTCAACATCCTAAAGGTGATACCAAGAAATTC
AGCTACCAGAAAATCTCCAGAATCGAACGCCCGTATGTTTATTATAATGC
TGACACCGATATCGGTTCGTCTGGCTCTGTAGTTCTTCGTAAGTTCAAAC
TGATAGCGGTACATTCAAAAGGTAGTGATTTGTTGCAGTATAACAAAGGC
ACGCTGTGTAGTGAGATTTTACATCATTTACGCACGGGTACATATACACA
ACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaaaaaagaaacgaaaat
cTGACGTCTTAGgaGAATTAGAAACAGCTAACAAACGATCACGTGACACG
GAGAACACCTTACAACAAAACACTTTCAATGATCATCACATAAACACCGT
CAAACCAACTGAAGACCAACTAGCTGACCTTTCCAAGGAAATTGTGGCTT
ACTGGAAACATTTAgcaagaaaattgaaactacCGAACTGTGAGGTGCAA
CGTATACAAAAAGACCATGTCAATTATGATGACATTACTGAAAAAGCCAA
CGCAATGCTGTTAACTTGGTTGGAACTTGATACAAATGCTTACGTCAGCA
CTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAAGACACAGCTGTCAGA
CATTTCCCAATGTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037557	XLOC_037557	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059698-protein	TCONS_00059698-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_330	supercontig	scaffold_330:403743..407910 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.22714	4.09759	1.48144	1.30999	25.3809	17.1605	18.9566	20.3817	22.8146	21.0371	17.8699	16.9418	17.2696	17.5871	19.0453	21.2052	24.7253	25.3426	12.6782	14.6663	17.8808	17.1228	16.3289	15.2126	12.4538	12.923	6.58977	4.12394	9.49529	9.27585

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000488	Death_domain
IPR011029	DEATH-like_dom
IPR009003	Peptidase_S1_PA

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00059698 vs. Swiss-Prot (Human)

BLAST of TCONS_00059698 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00059698 (transcript) - C. hemisphaerica