TCONS_00059669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059669
Unique NameTCONS_00059669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1200

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059669 ID=TCONS_00059669|Name=TCONS_00059669|organism=Clytia hemisphaerica|type=transcript|length=1200bp
atttgacTGGAAAagttataaaacaaatttcaaagaattcttttgaattt
tgaatgcaATTCTTCCTAAATTTTACcataaagtgaaaaatattattaac
tttCTCTATATTTCACAGAGAATTTATCCACTCTGCTCAAATAGAATCAC
TCGCGGGAAAAAGAAAGATGGCGACGGGAGCAACGAATCCATCAAATCCA
GttgttttctttgatatttcTATTGGTGGTCAGgATGTTGGTCgattaaa
aattgaactttttgcaGATGTTGTGCCAAAAACAGCTGAAAACTTTCGGC
AGTTTTGCACTGGTGAATACACgaAAGACAAAATCCCAATTGGGTATAAA
GGAGCTACATTTCACAGAATAATTAAAGATTTCATGATACAAGGTGGAGA
TTTTATCAAGGGAGATGGTACTGGTGTGTGTAGTATATATGGTGGAATTG
ATTTTCCTGATGAAAATTTCGAGAAGAAGCATGAAGGACCTGGTTTACTT
TCTATGGCCAATAGTGGAGTTGATACGAATGGCTGTCAGttcttcataaC
ATGCGCAAAATGTGATTTCCTTGATGGCAAGCACGTTGTTTTCGgtAAAG
TGATCGATGGTATGTTGGTGATGAGAAAAATTGAGAATGTACCGACGGGT
GCCAACAACCGACCGAAGCTTTCCGTTATCGTATCTCAGTGTGGCGAAAT
GTAACCTTACGTAGATATGGAGGAGGAAGGTTCTTTTAATACGAAAAGCT
CTCCATGTACCTTTTACGCGTTATCTGCTACTGTTACTGCTACGGTGATA
ATCCGTTGACGaaactttatttattttggtTGAGTAGTACCCCTGAAATA
TATATTGATAGACATTGATCAGTATATCGGGAAGCGAATCCGCtttggat
tttttgaacagataAAAGACATTACATAAGAAGAAAATCGTTTTTATGAA
AAGGTcagatattttattattttttacaatttgGTAAATACGTTTTTTAA
TCAACAGATAAACCATGAAGATAAGTATCAATAAATATAAATGAATTTTG
GATAAAGATCTTTATTctcaaaatgtaagaaaaatcGTAAGCGGTAGTTA
TTTCCAcaatatttcatcaaaaagcACTTTCAACCTTTTGTTTTGTATTT
GTAATtaaagaggccccccagcggcacccctaatcacgccatcacgcaaa
Run BLAST on NCBI

protein sequence of TCONS_00059669-protein

>TCONS_00059669-protein ID=TCONS_00059669-protein|Name=TCONS_00059669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=178bp
MATGATNPSNPVVFFDISIGGQDVGRLKIELFADVVPKTAENFRQFCTGE
YTKDKIPIGYKGATFHRIIKDFMIQGGDFIKGDGTGVCSIYGGIDFPDEN
FEKKHEGPGLLSMANSGVDTNGCQFFITCAKCDFLDGKHVVFGKVIDGML
VMRKIENVPTGANNRPKLSVIVSQCGEM
Run BLAST on NCBI

transcript from alignment at scaffold_330:122505..137321+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059669 ID=TCONS_00059669|Name=TCONS_00059669|organism=Clytia hemisphaerica|type=transcript|length=14817bp|location=Sequence derived from alignment at scaffold_330:122505..137321+ (Clytia hemisphaerica)
atttgacTGGAAAagttataaaacaaatttcaaagaattcttttgaattt
tgaatgcaATTCTTCCTAAATTTTACcataaagtgaaaaatattattaac
tttCTCTATATTTCACAGAGAATTTATCCACTCTGCTCAAATAGAATCAC
TCGCGGGAAAAAGAAAGATGGCGACGGGAGCAACGAATCCATCAAATCCA
GttgttttctttgatatttcTATTGGTGGTCAGGTAAACTTTTTAGCTCA
CTATTCTGCTACCCAATTTTTGATTCAAAATATACTTGATTATTTGATAT
CCATCAACCACAATATCTATCACACCATCAAGGATCTGTTTTATAATGTT
GTGTTATTTAAATGTTTTATTGAAGCAAGGCAGAGTGTCCCGGGCTCTCG
ATAGGATCAATGTAATGAAGAATCGATAAAAGAAtgactagccgtattgt
ataagggttgcaaagcgatccagactccacctcaattctcaagttgctag
caaaataagagacactctaaaaatccctctaataaagccgctatagagac
aaggttgtaagagccttaatgccccaaacacaccacataatccacggcgg
cacaacacccgccgccgccCGCCGCGCATCGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
gagaaaaaaattcacaatgtttacattcctctaacctttcacagtactaa
agtgcgcatttttacctaccatttttaccgggcctctgcaatggagtacc
atgaaatagcgagactcctaaacggtgtattgaccttatttgatacttga
tacttgctgttaaaagtcaagggatgatgaagatcttTTCTATcaacgtt
caaactaatttttttctatttaacagcaaaataaacatttaaaaccgaag
aaccactgcttagattgcttagatgcgtgccgcccgcgcggcaatttgat
caacttcagattctaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtttttcgcagtcctagctaccaaaccgagaaagt
ttttgtGGCTTCAAGcgaaaccattcaaggtcattttgataaaatcatcg
gtttgaagatgtgatttatatagcaaattttatagcaaattttcgcttgg
gatagaagttaaaaaggtacatgcacaatatagcaaaactgcttcgctca
taaattcgcttcgcaataaatTACATATTGATTCCGATAAGAGATCGAAG
TGGGgattgatactcaagatttttttgatCATGATAActtatcgattact
tatcgatcttACATCGATCCAATCAAATTATGGTAATCCATACCGTGAGg
tgtgagattgggtaacttgcatcagtagtggaggctaacatgcatagccc
tcaaataaaagacctggctggtcattaaaaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNgcacaatgatgtaaaatggcaatgc
ccaaaatgtgactcCTCAATCTGtgatgaaataatgaaaactgaaaacta
aatgttttttttacttcagttttaaatttctctgaatgattgattaaagt
gTCGAACACAATctaatctcaatcgaatattaccgcaattttcagattcg
attgatattcaattgcgttcgattgatgttcgattgtattcgattgcgtt
cgatcgtcgattcattgacccccggattgttcatcgcataatttctacgg
gaaatcgaaagtgatttcattcagcttgtgatgtttgagagcttggatgt
ttagaagctgcaagaataaagccagacgatctcaatcgaacggaatcgac
gatcgaaccagtcgaacaacaatcgaaccaattgaatactacccagaatt
ttgacgttcgattgagattcgattgcgttcgacaatcgaatttcaatcgg
tcgattgcgttcgatttggttcaattggttcgattgtcgattccgttcga
ttgagatcgccTGGGAATGTTACAAGATGGTAGGAGGTTTTTGtacagaa
atcttcaaaaaaatggaatttcaaaatggaatatctgaAAAACTACTAAA
GGTTGAAAGATAagtcagtgaggctggaacttcgatttttgaggattacg
attttaccagttttttagcaatttttgcctcgctaacccaaatctcacaa
cctctttaccttaaggaagatcgaaattagagtttttgagCGTttcgaaa
aaaacgcatagcagaattttttttatcttcacaggatcgattctcaacaa
caaaatacttcttttggtctttgggtttgtttctgacgtttttccttcaa
agaatatcgctcactttccttttcccctgagcgcgcgagaaaaaatgatt
agctcgcattttCGGCAGGCGAATAAAGATAGCTTGCATTTTCGCGctgg
cgaataaagatgagacggcaatcttgcactgagggtgctacttagtttcc
gctctattttgcgcccacgatagaatggcccaaacacgggggtattccaa
atgataaacatGCGGCAAATGCAacgggtcgaaaacgaaagtgacgaaaa
aaccCCGTGCAAATACACTCGATCACTGTGACCCGTTGCATTTACACAGA
GTGGAAAAATGTTACacttgattataaaaaaatgcacctagatcaaaatt
ttaaccgtaggcaaaaattttctaaaaaggctaaagaatcttctaaagag
aaaatgaaaatgccattcttcttcgttttatgccattttcattttaaagt
tgagatttgttaattttcgcgcattttgccttaaaatgttctagctcatt
tacactgggtcggaaaaaattgttgaaaccgttgcaaatgcacaccccgt
gcaaatgcaaggattccCGTGACtgacctttctataaatttcagctgata
aaaagggtctcggaattagaggaggggtgtcgacattagaccaagttacg
gtatgcatgttagcctccactgatgcaagttacccaatcacGATAATAGA
TCAAATAAGTAATGGATAAAGGCTCGATATGAATCAATAgaagattgaat
gaaaaaaagatcGATAAGGGATCATGGAAGGAtcaatactcaagattttt
tagaGCTCAATCTTCTATCGATCCCTTATTGGAATCGATAAATAATTTAT
GGAAGAATTGATAAGGCAAAGGGAAGTCAGGTATTAGTTTACCGTTACCA
GCCCGCGTGTGTTTGAGCTACtgcctaaaaattttcattattttaaaaat
tttcattatttctatttttgtttAGTCCAAATATGAAAAACATCAATACA
TGACTTACCAATGGCGTGTATCATTGCCACTCGCGCGCCCAATGTGAAAC
AAACTTCCCTTCGCCTAAGTAATTTATCAAGGAATCAATAAGTAATTTAT
CGAGGAATCGATAAGTAATTTATCGAGGAATCGATAAGTAATTTATCGAG
GAATTGATAAGTAATTTATCGAGGAATCAATAAGTAATTTATGGATCCTT
CATTGATACATTCCGATTATTGATCctatcatagaggtataaagaaagac
aggagatgaatttgtcggtaattggtcgttaaagtcttttgatttctttt
atgtaataaatcaaaagaaattctaggctcgcccaatgaaatatgacttt
ttagtagaactcaagttttctctgaacattcttactatcagcaacgaaga
tttctagccttctgatatacgagaataaaataaaatttagctccacgaaa
taagtttgcgttcaattttgtcatccattaaattttgttttgaaaagata
ttttctccagccagaaaataaaaagttctttataagcatacacaatttaa
gacccaatttgtagacaaaaagtcgctggagaattttggaggaaagtatt
aagcaatagggttcaccttaaagaaaatgttgttcgaaaaatcttgtcct
ttgatgaaggattgcaaagtttacaggccttttataatccaaatattttc
ttacaccaatgtcagaaacaatggatCTCGTCTCATATAATTTCTACAAC
TGAAataagccaataagatttcacctatcaacaaaagagctcattaaaaa
tgcacaatatatgagattatgagcgtgcatacctcgtaattcttttaatc
gtagggcgagcatggttacaatagcatacttctcctgtttctttatacct
ctatgatccTATCAAGCCCGACTGCCTGGTTACCACCTAGATCCGCGTAC
CGCCGGaaaggctatttcccggaaattttgccggacttcaaacactgacc
catgtactacatgtgcagaattatttttactttagcgtgtGATCAAGGTT
TAATTAAAGAATCAAAGCACTATCTTGTTatttaaaatgataaattttgg
ttggttgattttggctgctgcatgttttaatttgtttcaaacttttaagt
tttaaaattaattgtcttggggaACAATGAttgaggtaactctcatcctt
ctTCCATTTAGATGACTGATTTCCTAGTTTGACTAACTGTCTGCGTGGgt
taaattaaaaaatggaaTAGGCCATTGCTTCTAACAGATTGAGAACAATC
ATGTCTTTATTAAACATTATCAACTTTTCTTTAAGGTACAGTTTATCTAT
atccatggaggtaataaaaatatagatggaaaAACCACTCCTtattgtat
tgtatcgttgatagcaaactgttgctttgttgctttgggaaaaagccatt
aattttgctttcgctCATGGGAATACTTGAGTCGAAGAGAATATGAATAA
AATCGCGCTACATTTTAATTTTGTTCATTGTGGgatgacagttttgttta
taaaacataagaaaaccttgcaagaataagcacagaacatcaaatttgaa
atgttcgctgctcagggaatcctcggcaaattttgtcaatttttacatat
ttactaatgCTAATCGttcaactatattctatcaaaattttgtgacagct
gctattttagatctaaagatatttatagcaaagaaccttccacaaacaac
aaagaattcgcaaaatttgaagaagtttacctgtcgaaagtttcccgata
aaataaaaacttcttttaaaactataaagaaattattactctAAAGAAAT
Ttgcattttacctaaaaatacgaggtttcgttggacagaataactttact
ttagttcttataatctatatcttgacttattttgctatcaaggattggta
atcaaaggagaccgatttgaaagaaatttctaaagagttttatgacttcT
CTGGCTATTACAGAAAAATTGTTACTccattatatttttattacctccat
ggtatggttaaaattaattttttttcaaaaataatcattttggCCGATCA
AGAAAAGAATGCtccaaactttctttttgtCTAAAAACGAAATTAAAATC
TTACTTAGTTCCCGAGATATTAGGgttttaaaaactttagaacAGATTTG
AACTTATAATTGGCTATTTGCATAAGACAAAGATGAAcattataatttct
ttttgcatctttttgcaaaatcaaTGTCTCTGCAATTACTAATCAAACCT
GATCAAACAGGCAATTGTCtctctcaaaatttcaagtcactgtagaaaaa
aatcagattttgcCATAACTTCAAAAGACTTAAAATCACCCATAGCTTTG
AGTTATcgactttattatttttctcaacttcagttgagttagaatctgag
aatgtgtgtctgtgtgtatgtcccaaaactttggggcagcctggagactt
caaaaattgttcgatttggctgaaatttggcacacttgttccttgggtga
atatctgggggtgtttttttcatttttcaaaaattttgatttttggggcc
tgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttggggcctggggac
gagtttttcgccaaaacgaggctaaaaccttagggcagcctggagacttc
aaaaattgtttgatttggctgaaatttggcacacttgttccttgggtgaa
tatctgggtgtggtttttgcatttttcaaaaattttgatttttggggcat
gggggcgagttttttgccaaaacgaggctaaagctttggagcagcctaca
ggcctccaaaatggtcggatttggttgaaatttggcacacttgttccttg
ggtgaatatctgggtgtggtttttgcatttttcaaaaattttgatttttg
gggcctgggacgagttttttgccaaaacgaggctaaagctttggagcagc
ctacaggcctccaaaatggtcggatttggttgaaatttggcacccttgtt
cattgggtgaatatctgggggtctacaattgggcctatgaataatttgaa
gccactgaagttgagcccagtgcgttgcgcacgttcgactattttaaTGT
ATTCCCAGAATATTGGTCTAAAAAACCTTCTCTAAATCATGTCAAAAAAG
AATAATCTTGATTTATCCGAAGTTATTAACAAAAGAACAGAAGGCGTCTT
AACCTTAGGTTACCTTAACATACCTTATTAAAACCAAAAGTCAGACATTT
TTTGTGTTATTGTCTCATACAATTATCTTAATCAGTTAATCGTTCCAATT
GTTGCTCTGTTATTATATACAAGTGGCCCCTGGGGGAGACAATGGCTCAG
CTGCCTAAAAGCTGATTCATTATTCTATGGCCAGCCATTTAAAATATTag
tcattattattattattattcattttgatttttgaaatttcctcaGTTTT
ATGATGTGGCAAAATATTtcccaatttttggaaaaatttctcgATTCAcg
gttttgctttttttttatttttgactgtAGTTTGAATCAGAACCCCAAAT
GGGGGGGGGGAGTACTTCTGCCAAAAGTTCTGACCTTAAAAAACTTCCAt
gtttaaaactttgaaaaaacactacatcttgaattatGCTATATTATACT
ATGTTTCCGATGGACGGTATGTCcaagaaaaagtttgaaaattgaccctt
acagagactgaatttcgagaATTCATGATGAGACTGAATTTCGAGAATTC
ATGATGACCCTTTgagttgatttttgatttttgtaattttggaaccctta
cagaAACTCAATTTTCTATTTATGGTTTTTGGACTTTCCACTCCAGGGTG
TGAAAAAGgcacccttatggctcgcagaTACCCTGCagccattttgccta
agtatccccctTTTGGATTTTCAGGTAAAATTCAgttaaacattttaaaa
ctgtactttttgtaaaacaaaccttttcataaaaatttaaattttgaatt
gcTGTATAAAGATGTATGCTTTCTGGCATAATAGATTTTAAGAACTTTCA
GACCCTTATTTTGCATACTGTGTTGTAGCAAAATCAACAATCTTGGAGTG
GCACTAATATGGGTTAACTGAGGCATTCTTAAAGTTCTGATTCAGATGGT
TTCATGGACATCTACTTGATTTCAACGAGGCTTCATTTTGTAGCCTTGAC
ACAGACGTTTTGCCTCATTTGATAACCAACTTCCAATTTTTAAATTAAGG
TGGTGTGAAATCatgtttatttctatttttaaggATGTTGGTCgattaaa
aattgaactttttgcaGATGTTGTGCCAAAAACAGCTGAAAACTTTCGGC
AGTTTTGCACTGGTGAATACACGTAAGCCAGATTCCTTTTTTAAATATGC
ATCTCCTAAACTGTCATCATCTCTCTGAAGTGAACTTGTAAAGAAAAGTT
AGGGACTTCAGCTGACAATTCGTCAACAATTGTTACATAACTTTTTGGAT
CAAAAATGCCtaagaaaatttcattataaTGAGAAATTTTCACTCTATGC
AGAAACCTTAAAACTACATATCTTCTTTATTCTTACGGTaacttcaaaac
atttttttcaggaAAGACAAAATCCCAATTGGGTATAAAGGAGCTACATT
TCACAGGTTAGTTTGCACGCTTCCATCCCTTTTGTTCCTAATAGACAATG
CAATGGTGGTTGTTAGCTATTAATATATTTGACCCTTTTTCAATTAATTA
GATGGTTGATAAAAGATGATAGATAAAATGATAGAGATCACTCTTGGTAA
TGAGTCATTAATAAATTATTACTGTTTtagtttgttaaatatttttagct
agaccaaaagatgaaaaatgctTTGTTGACTTTTACTTCTTATCCACCAT
TTTTTCTTTACCTCAGAATAATTAAAGATTTCATGATACAAGGTGGAGAT
TTTATCAAGGtaaattatttcaatatttcatgAATGAGAAGGGTCAGAAC
TAAAATCCCAGACATCTCCCTCAAGTCTTACGTCTGATATGTCTCAGATT
TTTAAATTAATACTACCCCctcatagtttctacccccctacatttagggg
ggtcttgggttttgatgaaccaaaagcaaggggggttgttaaagtttgac
tttcctaagggggggggggggttgccagttaagggggtcttcttacctaa
ggggaggtcttcttagataagggggatcttccttgaattatgaCTCTTAT
ACAATcgtttcatttatactgattttctaagggagttatgaaattgtaaa
tgaatttcctaaggggggttagcacttaaggggggtcctcttacctaagg
ggggtcttgaccccttTAGAAACTATGCCCTTCTGCATAATGAACCTCTT
TCTTATCATTTGATCCAGTTTGATCATACTTTCTGTCTGTTTAAATCGGT
TGGGAAActatatcatccaccaggatgtaAGTCGAGTTTTTAAATCTGTG
GAGCTATAGACgtgggttcggttattatcaatTAGAATTGgagttggagc
tcgagagtcacaatataaggccaaAGGCCTTCTAAGGGGAGCTCGTACCC
TGTGATTTAACCTAGGATCCCCTTTTAGGGGTactggtagggttgggagc
tattttaattaaggtctgtaaatttCAAGCTACAAGTTTGAACGAGAAAG
CTCTGCCGTGTCTCCGTGGCCTAACCGGTTAGGTATTgagtttgtaaacc
aaggttgcttgcatttggtggttccaGCTGGGGTAGGAGACCCATTTCAC
CGGTATGGGCAAATTACTGAGGattacttagaaaacagttagaaacacta
agaaagtcagaaaatcaggttaaaagataggaaagtagaaaatagggggg
gggggaataaaGGACCCTGTATCCTGTAATATGATCGTTTGGCAACATTT
ACATATCATTTACTGAAGAAGTAGCATTAATGCTTGAGTTTTGATCCTCT
TAAATATCCTCTCGTAACCTGATTTGATTTCGTAGGGAGATGGTACTGGT
GTGTGTAGTATATATGGTGGAATTGATTTTCCTGATGAAAATTTCGAGAA
GAAGCATGAAGGACCTGGTTTACTTTCTATGGTATGTGATTGAGGAAAGA
TCCTTAAGATATTCATTACTACTGTTTTCCCCCTTTCTTCTGTACAATGC
ATACATACTTAAATCATCTGTTGAATGGAATGTTGAACCAAGCTGCACTT
TCCAATGagcatagtgcggaaaggggtctgaccgcccttcttggcatccc
ccaacctttaaaaatgcctatcccccaaggatttTGAACATAATTGgcta
acaaatatatgtgaaatatctttagagagagaaagcgaaatgataaactt
ctttcttctttttgactcaaactactctaacagaaaacttccttttatga
agaccaaatttcatagcagtgcttgaaaataatctacaatatatatgtaa
gcctatcccccttccttgctatcccccctttttcatgaaaatttctgatc
cccccttcttcattttttcggaAGGTGTCATTCCCTTGCTAACGTGTTGC
TAAAGTGGGGAAATGGGATATCTGACAGTGATTTTGTTCATAATCGTAAA
AAAATCTTTCGGTTTTGATCACTCAAGTAATCAAGAACTTACAATTTGTT
TTTCAGGCCAATAGTGGAGTTGATACGAATGGCTGTCAGGTAAATGTCTC
TATAGTGttaatattttgttcttttaatgAATAATTCAGAAAAGTTCTTG
TCTTTTGCTTATCAACGATATCGCTTTTTATAGTCAGGCTTAGCATATGC
TTTAAATTATATTTGAGCCGTTATCAGAGCTAAGGTATGCGCATAAAAGA
AAAATACAGTAATTGTGTTTTAAATGACTTTGCTAATGACTTATTTATCC
ATTCCTTTAAACGGAACTTGCTTGTAAGAATTGATTTACcttttttttca
gttcttcataaCATGCGCAAAATGTGATTTCCTTGATGGCAAGCACGTTG
TTTTCGGTAGGTTGCcttttgcaaaattaaagaaagtaAAAAGAAGTTTT
CGTggaaagaaactttcgcgaatgcaGGGGGGCACGccgttactacaaga
cagtatgacattTACTACCGTTGTGGTActgttttcaaaagttttgaaag
tagttactacacagtgtagtaactgctgttttgGGTGGTGCCTTATTTTT
AATTAGatgcaaaaaatttcaaaataagctctgaaaacccatgttgtttt
tattggacTTGGAGAGTTTGGGGGATAATTCCAGAAGCCAAATCCACTCG
ACATTGAAGGAAATGAATTCTTGGAAAGTCTTCAGGCGTTTTTTTATGTC
TGAGATTGAAGATTGAAGGTTTAATGAGTTTTgctcttcaactttttcga
gaAGACATTAAATCATATTTGAGAGGGGATTAATCAATTATAAACAATTT
TTCAGAGCTCTCTGATACACCCACCACCTACCTACCTGTGTGTCTGAAGG
TTCGtccattttcagtcattttcagtcatttgaaGTTTTTGGAAGTCTAA
AAATCACAAGGACTAAAAGCCACAAGGACTGCTAGCAAGCCTGTATATGT
CGCCTGCCAAATAACCACTTTCATTCGTTCATTTGGggaattttaattaa
ttttgatAACCTTCATATAGAAGGTACATTTCAGTTGGCAATTCAGAACT
AATGGGTGCAAGTTAAGTTGGTTcaaaatttctatttgtttttttatgaa
gtttAAATAGATGTTTCATTCAGTTTCATTAGGTTTCATTGTGTAGTTTA
TGATTAATTCAGATTAATTCATATTTTATAGAAGAGATGATAAAGTATTT
agtttatttttgcaaaatatttcgACAAGGCCTcttaaaactgttaaaga
tAAGTACAGTCAACTTGGGAGTTTTCCTTATGTATCGGTTACTTTTCACA
GCAGAAATTCGAGAATTTTGTTTACCCGCAGTTACCATGCCTATAATGTA
TaggtgtattttcattgttaaatgaaagtgaaagtaaacagAAATATTTC
TTCACAAAGTTGCACAGAAGTGGTGTCTTTGATATTTCCACCCGAAAATG
GGGGTGGTACCTGAATTTTTTCCCGGAAAACAGTTACTAACCTGGTGTAG
TAAATGCAAACAGGGGTGGTGcctaaaattattttccaaaaacagTTACT
GCCCGGTAGTAACTGCAATGGGTGGTGTCCTAAAAAAACGTGCTGAAAAg
acttgtagtaactgcgtgctcCCCCCCCTGGCAGTTGCGAAATTTTGCAT
TTCGCGAAAAATAGCTTTCACAAAGCTAGGTTTTATTAACGAGAAAAATA
TTATTGGATTCTTcagtgttttttaaacatttttttataaatattggCTG
GGCTAAATAAAGCCCGACTTTTTGTTACATCCCTCTACCTAAAAGCTTTG
CCAAAATGAACATATTTTCGTGAGAATAAATTacgaaaaatctttcaaaa
ttttgcgacagttttttttttcttttagtaaCTTTCAGAGCACTGACTTC
AATGGCCCTATGTAGAGCACGCCAGCAAGATCGATTAAAAAGTTAGGcac
aaaattgagaaatctgTTTATTAAATAAAACCCTATTTCAATCTATAATT
TTTGATCTCccagaaaattgaaattgtcttttttttcttttgaaggtAAA
GTGATCGATGGTATGTTGGTGATGAGAAAAATTGAGGTACCACTTCTCAC
CAtttatgttttgtttgtttggaaaTTAACTTAATACCAAAGTTGCACAT
GTGTGGCATCGTGTACAATAAGTATAGCAAGCCTTGCAGTGTTGGATCGA
ACAATTAAGTTACGTCACGCgctatcttttgttttgatgattggttgcAT
AACTGCAATATTTATGCAAGCTCAGCGTTTTTGAAGCAGCGAGTGATTCA
GACCTCGGAAAAcataatgtcaatctggctttaaattatttttgtctTTT
AGAATGTACCGACGGGTGCCAACAACCGACCGAAGCTTTCCGTTATCGTA
TCTCAGTGTGGCGAAATGTAACCTTACGTAGATATGGAGGAGGAAGGTTC
TTTTAATACGAAAAGCTCTCCATGTACCTTTTACGCGTTATCTGCTACTG
TTACTGCTACGGTGATAATCCGTTGACGaaactttatttattttggtTGA
GTAGTACCCCTGAAATATATATTGATAGACATTGATCAGTATATCGGGAA
GCGAATCCGCtttggattttttgaacagataAAAGACATTACATAAGAAG
AAAATCGTTTTTATGAAAAGGTcagatattttattattttttacaatttg
GTAAATACGTTTTTTAATCAACAGATAAACCATGAAGATAAGTATCAATA
AATATAAATGAATTTTGGATAAAGATCTTTATTctcaaaatgtaagaaaa
atcGTAAGCGGTAGTTATTTCCAcaatatttcatcaaaaagcACTTTCAA
CCTTTTGTTTTGTATTTGTAATtaaagaggccccccagcggcacccctaa
tcacgccatcacgcaaa

Coding sequence (CDS) from alignment at scaffold_330:122505..137321+

>TCONS_00059669 ID=TCONS_00059669|Name=TCONS_00059669|organism=Clytia hemisphaerica|type=CDS|length=4833bp|location=Sequence derived from alignment at scaffold_330:122505..137321+ (Clytia hemisphaerica)
ATGGCGACGGGAGCAACGAATCCATCAAATCCAGttgttttctttgatat
ttcTATTGGTGGTCAGgATGTTGGTCgattaaaaattgaactttttgcaG
ATGTTGTGCCAAAAACAGCTGAAAACTTTCGGCAGTTTTGCACTGGTGAA
TACACgaAAGACAAAATCCCAATTGGGTATAAAGGAGCTACATTTCACAG
AATAATTAAAGATTTCATGATACAAGGTGGAGATTTTATCAAGGGAGATG
GTACTGGTGTGTGTAGTATATATGGTGGAATTGATTTTCCTGATGAAAAT
TTCGAGAAGAAGCATGAAGGACCTGGTTTACTTTCTATGGCCAATAGTGG
AGTTGATACGAATGGCTGTCAGttcttcataaCATGCGCAAAATGTGATT
TCCTTGATGGCAAGCACGTTGTTTTCGgtAAAGTGATCGATGGTATGTTG
GTGATGAGAAAAATTGAGAATGTACCGACGGGTGCCAACAACCGACCGAA
GCTTTCCGTTATCGTATCTCAGTGTGGCGAAATGTAAATGGCGACGGGAG
CAACGAATCCATCAAATCCAGttgttttctttgatatttcTATTGGTGGT
CAGgATGTTGGTCgattaaaaattgaactttttgcaGATGTTGTGCCAAA
AACAGCTGAAAACTTTCGGCAGTTTTGCACTGGTGAATACACgaAAGACA
AAATCCCAATTGGGTATAAAGGAGCTACATTTCACAGAATAATTAAAGAT
TTCATGATACAAGGTGGAGATTTTATCAAGGGAGATGGTACTGGTGTGTG
TAGTATATATGGTGGAATTGATTTTCCTGATGAAAATTTCGAGAAGAAGC
ATGAAGGACCTGGTTTACTTTCTATGGCCAATAGTGGAGTTGATACGAAT
GGCTGTCAGttcttcataaCATGCGCAAAATGTGATTTCCTTGATGGCAA
GCACGTTGTTTTCGgtAAAGTGATCGATGGTATGTTGGTGATGAGAAAAA
TTGAGAATGTACCGACGGGTGCCAACAACCGACCGAAGCTTTCCGTTATC
GTATCTCAGTGTGGCGAAATGTAAATGGCGACGGGAGCAACGAATCCATC
AAATCCAGttgttttctttgatatttcTATTGGTGGTCAGgATGTTGGTC
gattaaaaattgaactttttgcaGATGTTGTGCCAAAAACAGCTGAAAAC
TTTCGGCAGTTTTGCACTGGTGAATACACgaAAGACAAAATCCCAATTGG
GTATAAAGGAGCTACATTTCACAGAATAATTAAAGATTTCATGATACAAG
GTGGAGATTTTATCAAGGGAGATGGTACTGGTGTGTGTAGTATATATGGT
GGAATTGATTTTCCTGATGAAAATTTCGAGAAGAAGCATGAAGGACCTGG
TTTACTTTCTATGGCCAATAGTGGAGTTGATACGAATGGCTGTCAGttct
tcataaCATGCGCAAAATGTGATTTCCTTGATGGCAAGCACGTTGTTTTC
GgtAAAGTGATCGATGGTATGTTGGTGATGAGAAAAATTGAGAATGTACC
GACGGGTGCCAACAACCGACCGAAGCTTTCCGTTATCGTATCTCAGTGTG
GCGAAATGTAAATGGCGACGGGAGCAACGAATCCATCAAATCCAGttgtt
ttctttgatatttcTATTGGTGGTCAGgATGTTGGTCgattaaaaattga
actttttgcaGATGTTGTGCCAAAAACAGCTGAAAACTTTCGGCAGTTTT
GCACTGGTGAATACACgaAAGACAAAATCCCAATTGGGTATAAAGGAGCT
ACATTTCACAGAATAATTAAAGATTTCATGATACAAGGTGGAGATTTTAT
CAAGGGAGATGGTACTGGTGTGTGTAGTATATATGGTGGAATTGATTTTC
CTGATGAAAATTTCGAGAAGAAGCATGAAGGACCTGGTTTACTTTCTATG
GCCAATAGTGGAGTTGATACGAATGGCTGTCAGttcttcataaCATGCGC
AAAATGTGATTTCCTTGATGGCAAGCACGTTGTTTTCGgtAAAGTGATCG
ATGGTATGTTGGTGATGAGAAAAATTGAGAATGTACCGACGGGTGCCAAC
AACCGACCGAAGCTTTCCGTTATCGTATCTCAGTGTGGCGAAATGTAAAT
GGCGACGGGAGCAACGAATCCATCAAATCCAGttgttttctttgatattt
cTATTGGTGGTCAGgATGTTGGTCgattaaaaattgaactttttgcaGAT
GTTGTGCCAAAAACAGCTGAAAACTTTCGGCAGTTTTGCACTGGTGAATA
CACgaAAGACAAAATCCCAATTGGGTATAAAGGAGCTACATTTCACAGAA
TAATTAAAGATTTCATGATACAAGGTGGAGATTTTATCAAGGGAGATGGT
ACTGGTGTGTGTAGTATATATGGTGGAATTGATTTTCCTGATGAAAATTT
CGAGAAGAAGCATGAAGGACCTGGTTTACTTTCTATGGCCAATAGTGGAG
TTGATACGAATGGCTGTCAGttcttcataaCATGCGCAAAATGTGATTTC
CTTGATGGCAAGCACGTTGTTTTCGgtAAAGTGATCGATGGTATGTTGGT
GATGAGAAAAATTGAGAATGTACCGACGGGTGCCAACAACCGACCGAAGC
TTTCCGTTATCGTATCTCAGTGTGGCGAAATGTAAATGGCGACGGGAGCA
ACGAATCCATCAAATCCAGttgttttctttgatatttcTATTGGTGGTCA
GgATGTTGGTCgattaaaaattgaactttttgcaGATGTTGTGCCAAAAA
CAGCTGAAAACTTTCGGCAGTTTTGCACTGGTGAATACACgaAAGACAAA
ATCCCAATTGGGTATAAAGGAGCTACATTTCACAGAATAATTAAAGATTT
CATGATACAAGGTGGAGATTTTATCAAGGGAGATGGTACTGGTGTGTGTA
GTATATATGGTGGAATTGATTTTCCTGATGAAAATTTCGAGAAGAAGCAT
GAAGGACCTGGTTTACTTTCTATGGCCAATAGTGGAGTTGATACGAATGG
CTGTCAGttcttcataaCATGCGCAAAATGTGATTTCCTTGATGGCAAGC
ACGTTGTTTTCGgtAAAGTGATCGATGGTATGTTGGTGATGAGAAAAATT
GAGAATGTACCGACGGGTGCCAACAACCGACCGAAGCTTTCCGTTATCGT
ATCTCAGTGTGGCGAAATGTAAATGGCGACGGGAGCAACGAATCCATCAA
ATCCAGttgttttctttgatatttcTATTGGTGGTCAGgATGTTGGTCga
ttaaaaattgaactttttgcaGATGTTGTGCCAAAAACAGCTGAAAACTT
TCGGCAGTTTTGCACTGGTGAATACACgaAAGACAAAATCCCAATTGGGT
ATAAAGGAGCTACATTTCACAGAATAATTAAAGATTTCATGATACAAGGT
GGAGATTTTATCAAGGGAGATGGTACTGGTGTGTGTAGTATATATGGTGG
AATTGATTTTCCTGATGAAAATTTCGAGAAGAAGCATGAAGGACCTGGTT
TACTTTCTATGGCCAATAGTGGAGTTGATACGAATGGCTGTCAGttcttc
ataaCATGCGCAAAATGTGATTTCCTTGATGGCAAGCACGTTGTTTTCGg
tAAAGTGATCGATGGTATGTTGGTGATGAGAAAAATTGAGAATGTACCGA
CGGGTGCCAACAACCGACCGAAGCTTTCCGTTATCGTATCTCAGTGTGGC
GAAATGTAAATGGCGACGGGAGCAACGAATCCATCAAATCCAGttgtttt
ctttgatatttcTATTGGTGGTCAGgATGTTGGTCgattaaaaattgaac
tttttgcaGATGTTGTGCCAAAAACAGCTGAAAACTTTCGGCAGTTTTGC
ACTGGTGAATACACgaAAGACAAAATCCCAATTGGGTATAAAGGAGCTAC
ATTTCACAGAATAATTAAAGATTTCATGATACAAGGTGGAGATTTTATCA
AGGGAGATGGTACTGGTGTGTGTAGTATATATGGTGGAATTGATTTTCCT
GATGAAAATTTCGAGAAGAAGCATGAAGGACCTGGTTTACTTTCTATGGC
CAATAGTGGAGTTGATACGAATGGCTGTCAGttcttcataaCATGCGCAA
AATGTGATTTCCTTGATGGCAAGCACGTTGTTTTCGgtAAAGTGATCGAT
GGTATGTTGGTGATGAGAAAAATTGAGAATGTACCGACGGGTGCCAACAA
CCGACCGAAGCTTTCCGTTATCGTATCTCAGTGTGGCGAAATGTAAATGG
CGACGGGAGCAACGAATCCATCAAATCCAGttgttttctttgatatttcT
ATTGGTGGTCAGgATGTTGGTCgattaaaaattgaactttttgcaGATGT
TGTGCCAAAAACAGCTGAAAACTTTCGGCAGTTTTGCACTGGTGAATACA
CgaAAGACAAAATCCCAATTGGGTATAAAGGAGCTACATTTCACAGAATA
ATTAAAGATTTCATGATACAAGGTGGAGATTTTATCAAGGGAGATGGTAC
TGGTGTGTGTAGTATATATGGTGGAATTGATTTTCCTGATGAAAATTTCG
AGAAGAAGCATGAAGGACCTGGTTTACTTTCTATGGCCAATAGTGGAGTT
GATACGAATGGCTGTCAGttcttcataaCATGCGCAAAATGTGATTTCCT
TGATGGCAAGCACGTTGTTTTCGgtAAAGTGATCGATGGTATGTTGGTGA
TGAGAAAAATTGAGAATGTACCGACGGGTGCCAACAACCGACCGAAGCTT
TCCGTTATCGTATCTCAGTGTGGCGAAATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037547XLOC_037547Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059669-exon-scaffold_330-1491911889:122505..122737TCONS_00059669-exon-scaffold_330-1491911889:122505..122737Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:122505..122737TCONS_00059669-exon-scaffold_330-1510915933:122505..122737Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:122505..122737TCONS_00059669-exon-scaffold_330-1575043694:122505..122737Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:131988..132076TCONS_00059669-exon-scaffold_330-1491911889:131988..132076Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:131988..132076TCONS_00059669-exon-scaffold_330-1510915933:131988..132076Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:131988..132076TCONS_00059669-exon-scaffold_330-1575043694:131988..132076Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:132316..132360TCONS_00059669-exon-scaffold_330-1491911889:132316..132360Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:132316..132360TCONS_00059669-exon-scaffold_330-1510915933:132316..132360Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:132316..132360TCONS_00059669-exon-scaffold_330-1575043694:132316..132360Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:132621..132663TCONS_00059669-exon-scaffold_330-1491911889:132621..132663Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:132621..132663TCONS_00059669-exon-scaffold_330-1510915933:132621..132663Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:132621..132663TCONS_00059669-exon-scaffold_330-1575043694:132621..132663Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:133740..133835TCONS_00059669-exon-scaffold_330-1491911889:133740..133835Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:133740..133835TCONS_00059669-exon-scaffold_330-1510915933:133740..133835Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:133740..133835TCONS_00059669-exon-scaffold_330-1575043694:133740..133835Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:134411..134443TCONS_00059669-exon-scaffold_330-1491911889:134411..134443Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:134411..134443TCONS_00059669-exon-scaffold_330-1510915933:134411..134443Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:134411..134443TCONS_00059669-exon-scaffold_330-1575043694:134411..134443Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:134706..134760TCONS_00059669-exon-scaffold_330-1491911889:134706..134760Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:134706..134760TCONS_00059669-exon-scaffold_330-1510915933:134706..134760Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:134706..134760TCONS_00059669-exon-scaffold_330-1575043694:134706..134760Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:136450..136490TCONS_00059669-exon-scaffold_330-1491911889:136450..136490Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:136450..136490TCONS_00059669-exon-scaffold_330-1510915933:136450..136490Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:136450..136490TCONS_00059669-exon-scaffold_330-1575043694:136450..136490Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1491911889:136757..137321TCONS_00059669-exon-scaffold_330-1491911889:136757..137321Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1510915933:136757..137321TCONS_00059669-exon-scaffold_330-1510915933:136757..137321Clytia hemisphaericaexon
TCONS_00059669-exon-scaffold_330-1575043694:136757..137321TCONS_00059669-exon-scaffold_330-1575043694:136757..137321Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059669-proteinTCONS_00059669-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:122505..137321 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
66.1846	65.1406	82.9547	91.1186	52.792	41.8758	54.2247	55.6868	43.515	36.77	24.0108	22.1623	14.8512	16.1794	24.0783	25.6768	44.2063	38.5195	4.3384	7.88495	24.5333	26.1859	43.3764	37.1584	22.4505	23.7562	24.7183	20.3028	29.8871	30.12
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
IPR024936Cyclophilin-type_PPIase
IPR020892Cyclophilin-type_PPIase_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Blast
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BLAST of TCONS_00059669 vs. Swiss-Prot (Human)
Match: PPIH (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 3.569e-100
Identity = 140/178 (78.65%), Postives = 159/178 (89.33%), Query Frame = 3 
Query:  168 MATGATNPSNPVVFFDISIGGQDVGRLKIELFADVVPKTAENFRQFCTGEYTKDKIPIGYKGATFHRIIKDFMIQGGDFIKGDGTGVCSIYGGIDFPDENFEKKHEGPGLLSMANSGVDTNGCQFFITCAKCDFLDGKHVVFGKVIDGMLVMRKIENVPTGANNRPKLSVIVSQCGEM 701
            MA   ++P NPVVFFD+SIGGQ+VGR+KIELFADVVPKTAENFRQFCTGE+ KD +PIGYKG+TFHR+IKDFMIQGGDF+ GDGTGV SIY G  F DENF+ +H  PGLLSMANSG  TNGCQFFITC+KCD+LDGKHVVFGK+IDG+LVMRKIENVPTG NN+PKL V++SQCGEM
Sbjct:    1 MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRG-PFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
The following BLAST results are available for this feature:
BLAST of TCONS_00059669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIH3.569e-10078.65Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
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