TCONS_00059643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059643
Unique NameTCONS_00059643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059643 ID=TCONS_00059643|Name=TCONS_00059643|organism=Clytia hemisphaerica|type=transcript|length=342bp
TTTTCGATATTGCATATCTAAGAATGACGATCATGTAGCTCGCGTATAGT
TGACCTTTTGGCATTTCTTGTcgcaatattttcaaaagttactCAATATC
TGTTACAGTTAACTGTACACTGCCAAAATGGATTTTCATAACCGTTTAAA
GTTCTGTAGTCATACTATTGAGAGTTGATGCCAAAGAGAACATCTAATGA
ACGTCCGATGATGTCATTATCTATGATAAACCGACATGAAATTGGGTTTA
AATTATGAATGATTTAAGGCAATGCTTTTGATTTTAATTGCATCATATTT
AAATGTAATGAATATCAAATTCCGTATTCAGGGAAAATCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_329:683175..683516

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059643 ID=TCONS_00059643|Name=TCONS_00059643|organism=Clytia hemisphaerica|type=transcript|length=342bp|location=Sequence derived from alignment at scaffold_329:683175..683516 (Clytia hemisphaerica)
ACAGATTTTCCCTGAATACGGAATTTGATATTCATTACATTTAAATATGA
TGCAATTAAAATCAAAAGCATTGCCTTAAATCATTCATAATTTAAACCCA
ATTTCATGTCGGTTTATCATAGATAATGACATCATCGGACGTTCATTAGA
TGTTCTCTTTGGCATCAACTCTCAATAGTATGACTACAGAACTTTAAACG
GTTATGAAAATCCATTTTGGCAGTGTACAGTTAACTGTAACAGATATTGa
gtaacttttgaaaatattgcgACAAGAAATGCCAAAAGGTCAACTATACG
CGAGCTACATGATCGTCATTCTTAGATATGCAATATCGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037523XLOC_037523Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059643-exon-scaffold_329-1491911889:683175..683516TCONS_00059643-exon-scaffold_329-1491911889:683175..683516Clytia hemisphaericaexon
TCONS_00059643-exon-scaffold_329-1510915933:683175..683516TCONS_00059643-exon-scaffold_329-1510915933:683175..683516Clytia hemisphaericaexon
TCONS_00059643-exon-scaffold_329-1575043694:683175..683516TCONS_00059643-exon-scaffold_329-1575043694:683175..683516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:683175..683516 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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