TCONS_00059641 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059641
Unique NameTCONS_00059641
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5557

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059641 ID=TCONS_00059641|Name=TCONS_00059641|organism=Clytia hemisphaerica|type=transcript|length=5557bp
CGGTAATGGAACGAACACTTATCAATTAACAATCGAATTTCgagtatcaa
aatttcaaaataattgtgaGTATTTGATCACTTTCTTAGCTAACAGTCAG
GAACAAGTGAAAGTTAGGATACCTGTCTGCAATCTCTCCTACTTAGGAGA
GTTGTATCCTAATTTGGAGATTTAGGTATCCTAAATAGGAGAGCAGACAC
TTTGACCTGAATTTTTAAGGTTACTGCTTCGATCCGCGTTTGGAAAACTA
TGCAAACCTTTTCTTCATCAAGATTTGCACCACTGActaaaatttcaagt
aatttctcTGGCGGGTTCCTCGAAAATCACATCTTTTAATAGTCTGCCGT
TCAGAGCCTAAAATTTTGCGAACACGagctaaagatttgtttttcttttt
acgaAACGGCTCGCTACGGCACGATTTTCGCGCAAAAAAAGTGTTCGCAT
ATGCTAGATAGCACATTTGAGTGGTGTTTTGGGCTATAGTTTTGCATTCC
GCCAGCCAAACTCAATGAAATTCAGTACACAATCTCTATTGCTTATTATT
TACATCTTGGAAGTGGTAAGATGGCGCGGATGTCTCTGGTTGGTGAAAAA
Tacagttttttggtttttagtatcctaattaggatgtcaattgctatttt
ggatacttttttgtatccaatttaagatactctcctaagtaggagagatt
gccaaaggtatcctaatttgcacttgttcttgactGGCTAATAACCCTTT
GAAGACTCAAAATAACCATTTGAGTAATTTTTGATTGTTTATTGATTACT
TTCAGTTAgagaaaccatccaggatcctgccattctataagccagcaaaa
actaaatgacaccttgtaaacttaagtttcttactattttccataAAAAA
CAACACCAAAGACATTGCTACTTCCCCCCAAGCAAAGCTGgagatcaaaa
caaattatcttccaagattatggcgcccttttggatcgattgttatggcc
atctaaaatggtggaaagagtcgCGGAAAGACAGAGGCGTCCGCTGCTTc
aagggtggtaacgccaaaacacccaatatgatcttccaacaaaagGCGAG
TTAGTTACCGCGNGACAGAGGCGTCCGCTGCTTcaagggtggtaacgcca
aaacacccaatatgatcttccaacaaaacGCGAGTTAGTTACCGCGCGAG
TTACATCATACACTCCACCACAGCGCAAAGATGCGAAAAGACActaacgt
cattttttaatgagtgttgttatgatttttcaGATCATTATTCATTATAT
TCATTATTTAATACCATAAACTCCCCCATTTGAATGATCGATTGTAAACA
GCAGTAGACAGTAGaacatcttcattttttacCGGCACGCGCTCGTATCC
TTTGTTTCACATTAGCAAGTtcatgtatttgcacttttgaggacggtaaa
gtgactgaagcgatttggaaaaccCCAcacttctgacccgcaaaatcgag
gacggtaaaaatgctgatttaccgttgtccttagttggtcatgatctagt
caaattagaaccttaccgtctccatcgctgaaaaacacacatacataaac
tctgTATTGTGGGCGCGCAAGTGGCAATGATACATATTGTATCCTTTGCT
TCACATTGGGTGCGCAAGTAGTGGCGATGATACAAAGCGTGTGGATGAAA
CCAGTTACGTGAAGGTTTCGGGAGACGATGTGTGAGCGATAGCGTCACAA
CTTCATGCTGTTCAGAGCCATTGGTAAGTCATGTCTTGATGTGGTTTTCA
CGCATGAATTGTGTGTTTTAATTGGGCAAGATGAACTCAATTTCAGATTA
TTTCTATTATTCTATCTACTAttatttctatatatttattATTGATCATT
ACCGATTACTTCAATCACAATCAAACGTTCGATTAGTACTGTATGGAATA
AACACCAGACGATGTCAACCGAACGATATCAAACCAATTTTCGTAATCGA
ACAATTTAATTTCATCAAACTAATTGAACAATAACTGCTTGATTACTGTT
CCATTGAACAGTAGTAGAAGAGTTCAAATAGAGTTCTATTAGTCTGTAGA
TCTTAAATAACGCAGTTTGTTTTACAGGGCGGGCGCCAACTACTTCTCAT
TGTTGACACATTCAATAAGAGTTCTATGACGTAAAGACGCTTCACAAATC
GAGGAAGTACTTCCACTAATTGTTAAAGtgtcaatacacctttcccgtga
TTCACATTATTTTGATGCCCTCCACCGTTTGGtttctggaggtaaacaaa
cccgtagTTGGTTTTGTGAGCTTTTCTCCAGTTCTGTAGAtcaaatcccc
tcaaattttagtatgttcaatctattcatgctATTATACCAccctaaaat
ttttttgccgaaactagatcgctatcaaaagttagaagccgAAAAACCTA
CTTTCCCTATCCCCTCGCAAGAAAAAACGCGTCAGTTTACTTCTCAAACA
ATTTCATACACAAcagtggagcgcacattttcccagGCCATTTcagagaa
gtttgaattacaggaaaggtgtattgactCTGACGCCTTTCTAAcataaa
atcgatttgtgagtgaccccttagaTGAGGGATTTGGACGTTAGACCAAC
TTACCAAACATACCCCATGAATGACCTCTTTTAATTGATCAAAAGGGTAA
TAGAATTAATGAAGGTTAGGCTTAGATTTTGAAACTGCTTTGTAGGTGTA
CCTGTGTAGCTCTagagctctaaaacagcatctagtAACATGAAAACAGA
ATGCGATTCTTCATAGGCATCAAAACCAAGTTCATTCACAAGCATCAGGG
CTGTTCCCTTTTTTCCCTACCATTACTTTGTGTAATGCCAACATTTGTCT
AATTCTTTCATTATTTCAACTATCTGCcagaattagacaaggtatgtcaG
CATTACACATAGTTACGGTAGCTCAAACATATTTGAGTCCTGTCCGGACC
AAAATAGTAAAACATTTGTTTGGCCTAAGCATTGATGTTCAGGCCAAGTT
TGGGCCTTAAGATTTTTGTCTTTGAAAACCTGACCCAAACACAAGCCCTA
AACATGTATGGGCCATGTTCGGGTTATGTTTGAgactttttcaagttcaa
aattgCCAACTGAGTGGAAAAAGTGCCATACTGTGGGTTGTTGCATCAAT
ACAATAGTGTTGTCTTTGAGcctcttttttttcttccacAAAACTTTTCC
TTCCAGAGGTTTCTACCCCATAAAATAACTAATAGACATTTTTTGCTAGG
CGCGATGTCATGTTGGATAAAAAGCCACTTCAATGAATGCAAGGATACAA
CAACAATAACTAAAGTTTCCCTTGCATCCATTGCAGTGTGGAGTTATCAT
GATttatgctggagtttttaattatccaACATGACAGCACaattagcaaa
aggtctatttccaggggataattttcattcaaaatttcaaggtgaAAAAA
GTTTGACAATACtgtatgaatatttttttgaaaaaaccccTATTTGTGAG
ATGTAGCAAGATTAATAAATAACAGTAATGTCATCATTTGACAATTATAG
ACCTTCTGTCAATAACCTTGTAAACATATAAATAACGTCCATTAAAATGA
TCTGCTGCGTCTTGGtgctactgtcaactgctctaacttgggactatctg
acaaaacatgggacgacaATTCGACCACTACCAACAAAGAAGACCAAAAT
AGTGGCAatacgatggagcgtttgatgtCACTCTCGCGGCacgttacaca
ctcgttatttgttaatccctcGGGCANACCAGTTGTCAAAAGTGGTCAAG
CTACACCAAGAATAATATCGCTGAATGAAGTGCCTAGATTTAATGTTGTT
CGTCCTAATCAATTTATTCAGCCTATTGTATCAAAGCAAATTATATCTCA
TCCTACAATACATGTACTACAAGCTCCTGGTGTTGTGAAGATCCACCCTG
CTTCGTTGAATCAAACGCCACAAGTAGTTCAGCAACAGCAAGTACCAGTT
ATTCCCTACTCTGCTAGTCAAATAGCCACAACCACAAACTCACATAACTT
CAATCAAGGTCAATGGCAAAGTACTGATGCTAGAACAGAAAATACATACA
ATTCCCAACAATACCCACCTAAAGATGGATCAcattcaaaatttgattgg
GATAGACAACAAAACACAGCTTCTAGAAATGACCCATATCATCAAATAAA
CTACTCTTCACAAGGTGAACAGCACCATGGACAGCAATCAACAAGAAATT
TTGCATTCAAAGACCAGAAAGAAAGCACAGATAAAACAGAAAATGAATAT
AATAATTATAACCCTACGAAGGAAAGGGCAAAAGATACAGCGCAAGATCA
ACAGAGAACAATCAGAAATGATTATTCATATCATAACAAACCTCCTGGTA
TTGAGAGAGAAAGAGAAACAAATTTTAGAGATCCGGAAAGTATCGCTAGA
AACAATGGTTCGTATCACAACAAATACGCAGATCCAGATAGAGCAATGGA
AATGTCTAATTATGGAGCTAAAACTCAACAACAAGCTGCAGTCAGAAGTG
GTTATTACTCCCATGATAAACATTTTTCTAATCACGGTAAAACAACAGAA
ACAGCTAATTTTCAAGCTGGTGCAACGATTTATCAGAAAAACACAGACAA
TCCCTATTGGGAAAAACATGATAGACAAAAAGAAACATCAAGTGTCACTT
CTAGAGACCATAATATAAGAAGTAATGTAACTAAAACTGACTATACTTAT
CAAACAAAACAAGATCAACAATACAAAGTTCATGATCGTCCAAGCTTGTA
TGATGAACAGAAAAAGCAAAACATTATTGTTAACCCCAAATTTTATGGGC
ACCAATCAAATGAAGGAAATTTATATACCAATATGGAATCTAACAGGGAT
CAAGTTTCTTTGAGGAATGAGTATAAAAACTTTCCTCAGTATTCATATCC
ACCTATTATGCAGGCAGTTGCAAGTGAAACTTCATCAATGACAACAGCAC
CTCCAAATAAAATTAATTCAATCTTGAAGAACAATAAAAATCAGTATGAA
ACTAATCAGGAAACATATCAAAAGGAGGCACAAAAAACAGATTATTCCCA
AGCAAATCTTTATGGTGAGTCCTATCTGAAAGACTTTTCTTGTGCTAGCA
ACCCCAAACAAGTTGATGAAAGGGTATTCAATAAGCAAaatttattcaat
caaaaaaattcaaaacagaacaTTTCAAGAGGTTCAACCTCTGATTTGCG
ACCAGCTGTTGCCACACCTTTTTTGTGGAAAAAGAAAGACTCTTCAAATG
AACAATCAAATGTAATACAAAATGTTTCAGACCAAAGCAAAGATTCTTCA
GAGTCTAGTATTGGTATGTTTCACGTTTGTGTATGTAAAACTACTGAAGA
AGAAATGGCGCATGCCAACTATTTTGTTAAAGCATATAACTTTCAGGACT
TGTTATCATACATGTCCGACCCGATGATACGCACTCTTCAACGTGAAAGG
AGCCTNN
Run BLAST on NCBI

protein sequence of TCONS_00059641-protein

>TCONS_00059641-protein ID=TCONS_00059641-protein|Name=TCONS_00059641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=598bp
MERLMSLSRHVTHSLFVNPSGXPVVKSGQATPRIISLNEVPRFNVVRPNQ
FIQPIVSKQIISHPTIHVLQAPGVVKIHPASLNQTPQVVQQQQVPVIPYS
ASQIATTTNSHNFNQGQWQSTDARTENTYNSQQYPPKDGSHSKFDWDRQQ
NTASRNDPYHQINYSSQGEQHHGQQSTRNFAFKDQKESTDKTENEYNNYN
PTKERAKDTAQDQQRTIRNDYSYHNKPPGIERERETNFRDPESIARNNGS
YHNKYADPDRAMEMSNYGAKTQQQAAVRSGYYSHDKHFSNHGKTTETANF
QAGATIYQKNTDNPYWEKHDRQKETSSVTSRDHNIRSNVTKTDYTYQTKQ
DQQYKVHDRPSLYDEQKKQNIIVNPKFYGHQSNEGNLYTNMESNRDQVSL
RNEYKNFPQYSYPPIMQAVASETSSMTTAPPNKINSILKNNKNQYETNQE
TYQKEAQKTDYSQANLYGESYLKDFSCASNPKQVDERVFNKQNLFNQKNS
KQNISRGSTSDLRPAVATPFLWKKKDSSNEQSNVIQNVSDQSKDSSESSI
GMFHVCVCKTTEEEMAHANYFVKAYNFQDLLSYMSDPMIRTLQRERSX
Run BLAST on NCBI

transcript from alignment at scaffold_329:653518..659074

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059641 ID=TCONS_00059641|Name=TCONS_00059641|organism=Clytia hemisphaerica|type=transcript|length=5557bp|location=Sequence derived from alignment at scaffold_329:653518..659074 (Clytia hemisphaerica)
NNAGGCTCCTTTCACGTTGAAGAGTGCGTATCATCGGGTCGGACATGTAT GATAACAAGTCCTGAAAGTTATATGCTTTAACAAAATAGTTGGCATGCGC CATTTCTTCTTCAGTAGTTTTACATACACAAACGTGAAACATACCAATAC TAGACTCTGAAGAATCTTTGCTTTGGTCTGAAACATTTTGTATTACATTT GATTGTTCATTTGAAGAGTCTTTCTTTTTCCACAAAAAAGGTGTGGCAAC AGCTGGTCGCAAATCAGAGGTTGAACCTCTTGAAAtgttctgttttgaat ttttttgattgaataaattTTGCTTATTGAATACCCTTTCATCAACTTGT TTGGGGTTGCTAGCACAAGAAAAGTCTTTCAGATAGGACTCACCATAAAG ATTTGCTTGGGAATAATCTGTTTTTTGTGCCTCCTTTTGATATGTTTCCT GATTAGTTTCATACTGATTTTTATTGTTCTTCAAGATTGAATTAATTTTA TTTGGAGGTGCTGTTGTCATTGATGAAGTTTCACTTGCAACTGCCTGCAT AATAGGTGGATATGAATACTGAGGAAAGTTTTTATACTCATTCCTCAAAG AAACTTGATCCCTGTTAGATTCCATATTGGTATATAAATTTCCTTCATTT GATTGGTGCCCATAAAATTTGGGGTTAACAATAATGTTTTGCTTTTTCTG TTCATCATACAAGCTTGGACGATCATGAACTTTGTATTGTTGATCTTGTT TTGTTTGATAAGTATAGTCAGTTTTAGTTACATTACTTCTTATATTATGG TCTCTAGAAGTGACACTTGATGTTTCTTTTTGTCTATCATGTTTTTCCCA ATAGGGATTGTCTGTGTTTTTCTGATAAATCGTTGCACCAGCTTGAAAAT TAGCTGTTTCTGTTGTTTTACCGTGATTAGAAAAATGTTTATCATGGGAG TAATAACCACTTCTGACTGCAGCTTGTTGTTGAGTTTTAGCTCCATAATT AGACATTTCCATTGCTCTATCTGGATCTGCGTATTTGTTGTGATACGAAC CATTGTTTCTAGCGATACTTTCCGGATCTCTAAAATTTGTTTCTCTTTCT CTCTCAATACCAGGAGGTTTGTTATGATATGAATAATCATTTCTGATTGT TCTCTGTTGATCTTGCGCTGTATCTTTTGCCCTTTCCTTCGTAGGGTTAT AATTATTATATTCATTTTCTGTTTTATCTGTGCTTTCTTTCTGGTCTTTG AATGCAAAATTTCTTGTTGATTGCTGTCCATGGTGCTGTTCACCTTGTGA AGAGTAGTTTATTTGATGATATGGGTCATTTCTAGAAGCTGTGTTTTGTT GTCTATCccaatcaaattttgaatgTGATCCATCTTTAGGTGGGTATTGT TGGGAATTGTATGTATTTTCTGTTCTAGCATCAGTACTTTGCCATTGACC TTGATTGAAGTTATGTGAGTTTGTGGTTGTGGCTATTTGACTAGCAGAGT AGGGAATAACTGGTACTTGCTGTTGCTGAACTACTTGTGGCGTTTGATTC AACGAAGCAGGGTGGATCTTCACAACACCAGGAGCTTGTAGTACATGTAT TGTAGGATGAGATATAATTTGCTTTGATACAATAGGCTGAATAAATTGAT TAGGACGAACAACATTAAATCTAGGCACTTCATTCAGCGATATTATTCTT GGTGTAGCTTGACCACTTTTGACAACTGGTNTGCCCgagggattaacaaa taacgagtgtgtaacgtGCCGCGAGAGTGacatcaaacgctccatcgtat TGCCACTATTTTGGTCTTCTTTGTTGGTAGTGGTCGAATtgtcgtcccat gttttgtcagatagtcccaagttagagcagttgacagtagcaCCAAGACG CAGCAGATCATTTTAATGGACGTTATTTATATGTTTACAAGGTTATTGAC AGAAGGTCTATAATTGTCAAATGATGACATTACTGTTATTTATTAATCTT GCTACATCTCACAAATAggggttttttcaaaaaaatattcatacaGTATT GTCAAACTTTTTtcaccttgaaattttgaatgaaaattatcccctggaaa tagaccttttgctaattGTGCTGTCATGTtggataattaaaaactccagc ataaATCATGATAACTCCACACTGCAATGGATGCAAGGGAAACTTTAGTT ATTGTTGTTGTATCCTTGCATTCATTGAAGTGGCTTTTTATCCAACATGA CATCGCGCCTAGCAAAAAATGTCTATTAGTTATTTTATGGGGTAGAAACC TCTGGAAGGAAAAGTTTTgtggaagaaaaaaaagaggCTCAAAGACAACA CTATTGTATTGATGCAACAACCCACAGTATGGCACTTTTTCCACTCAGTT GGcaattttgaacttgaaaaagtcTCAAACATAACCCGAACATGGCCCAT ACATGTTTAGGGCTTGTGTTTGGGTCAGGTTTTCAAAGACAAAAATCTTA AGGCCCAAACTTGGCCTGAACATCAATGCTTAGGCCAAACAAATGTTTTA CTATTTTGGTCCGGACAGGACTCAAATATGTTTGAGCTACCGTAACTATG TGTAATGCtgacataccttgtctaattctgGCAGATAGTTGAAATAATGA AAGAATTAGACAAATGTTGGCATTACACAAAGTAATGGTAGGGAAAAAAG GGAACAGCCCTGATGCTTGTGAATGAACTTGGTTTTGATGCCTATGAAGA ATCGCATTCTGTTTTCATGTTactagatgctgttttagagctctAGAGCT ACACAGGTACACCTACAAAGCAGTTTCAAAATCTAAGCCTAACCTTCATT AATTCTATTACCCTTTTGATCAATTAAAAGAGGTCATTCATGGGGTATGT TTGGTAAGTTGGTCTAACGTCCAAATCCCTCAtctaaggggtcactcaca aatcgattttatgTTAGAAAGGCGTCAGagtcaatacacctttcctgtaa ttcaaacttctctgAAATGGCctgggaaaatgtgcgctccactgTTGTGT ATGAAATTGTTTGAGAAGTAAACTGACGCGTTTTTTCTTGCGAGGGGATA GGGAAAGTAGGTTTTTcggcttctaacttttgatagcgatctagtttcgg caaaaaaattttagggTGGTATAATagcatgaatagattgaacatactaa aatttgaggggatttgaTCTACAGAACTGGAGAAAAGCTCACAAAACCAA ctacgggtttgtttacctccagaaaCCAAACGGTGGAGGGCATCAAAATA ATGTGAAtcacgggaaaggtgtattgacaCTTTAACAATTAGTGGAAGTA CTTCCTCGATTTGTGAAGCGTCTTTACGTCATAGAACTCTTATTGAATGT GTCAACAATGAGAAGTAGTTGGCGCCCGCCCTGTAAAACAAACTGCGTTA TTTAAGATCTACAGACTAATAGAACTCTATTTGAACTCTTCTACTACTGT TCAATGGAACAGTAATCAAGCAGTTATTGTTCAATTAGTTTGATGAAATT AAATTGTTCGATTACGAAAATTGGTTTGATATCGTTCGGTTGACATCGTC TGGTGTTTATTCCATACAGTACTAATCGAACGTTTGATTGTGATTGAAGT AATCGGTAATGATCAATaataaatatatagaaataaTAGTAGATAGAATA ATAGAAATAATCTGAAATTGAGTTCATCTTGCCCAATTAAAACACACAAT TCATGCGTGAAAACCACATCAAGACATGACTTACCAATGGCTCTGAACAG CATGAAGTTGTGACGCTATCGCTCACACATCGTCTCCCGAAACCTTCACG TAACTGGTTTCATCCACACGCTTTGTATCATCGCCACTACTTGCGCACCC AATGTGAAGCAAAGGATACAATATGTATCATTGCCACTTGCGCGCCCACA ATAcagagtttatgtatgtgtgtttttcagcgatggagacggtaaggttc taatttgactagatcatgaccaactaaggacaacggtaaatcagcatttt taccgtcctcgattttgcgggtcagaagtgTGGggttttccaaatcgctt cagtcactttaccgtcctcaaaagtgcaaatacatgaACTTGCTAATGTG AAACAAAGGATACGAGCGCGTGCCGgtaaaaaatgaagatgttCTACTGT CTACTGCTGTTTACAATCGATCATTCAAATGGGGGAGTTTATGGTATTAA ATAATGAATATAATGAATAATGATCtgaaaaatcataacaacactcatta aaaaatgacgttagTGTCTTTTCGCATCTTTGCGCTGTGGTGGAGTGTAT GATGTAACTCGCGCGGTAACTAACTCGCgttttgttggaagatcatattg ggtgttttggcgttaccacccttgAAGCAGCGGACGCCTCTGTCNCGCGG TAACTAACTCGCcttttgttggaagatcatattgggtgttttggcgttac cacccttgAAGCAGCGGACGCCTCTGTCTTTCCGcgactctttccaccat tttagatggccataacaatcgatccaaaagggcgccataatcttggaaga taatttgttttgatctcCAGCTTTGCTTGGGGGGAAGTAGCAATGTCTTT GGTGTTGTTTTTtatggaaaatagtaagaaacttaagtttacaaggtgtc atttagtttttgctggcttatagaatggcaggatcctggatggtttctcT AACTGAAAGTAATCAATAAACAATCAAAAATTACTCAAATGGTTATTTTG AGTCTTCAAAGGGTTATTAGCCagtcaagaacaagtgcaaattaggatac ctttggcaatctctcctacttaggagagtatcttaaattggatacaaaaa agtatccaaaatagcaattgacatcctaattaggatactaaaaaccaaaa aactgtATTTTTCACCAACCAGAGACATCCGCGCCATCTTACCACTTCCA AGATGTAAATAATAAGCAATAGAGATTGTGTACTGAATTTCATTGAGTTT GGCTGGCGGAATGCAAAACTATAGCCCAAAACACCACTCAAATGTGCTAT CTAGCATATGCGAACACTTTTTTTGCGCGAAAATCGTGCCGTAGCGAGCC GTTtcgtaaaaagaaaaacaaatctttagctCGTGTTCGCAAAATTTTAG GCTCTGAACGGCAGACTATTAAAAGATGTGATTTTCGAGGAACCCGCCAg agaaattacttgaaattttagTCAGTGGTGCAAATCTTGATGAAGAAAAG GTTTGCATAGTTTTCCAAACGCGGATCGAAGCAGTAACCTTAAAAATTCA GGTCAAAGTGTCTGCTCTCCTATTTAGGATACCTAAATCTCCAAATTAGG ATACAACTCTCCTAAGTAGGAGAGATTGCAGACAGGTATCCTAACTTTCA CTTGTTCCTGACTGTTAGCTAAGAAAGTGATCAAATACtcacaattattt tgaaattttgatactcGAAATTCGATTGTTAATTGATAAGTGTTCGTTCC ATTACCG

Coding sequence (CDS) from alignment at scaffold_329:653518..659074

>TCONS_00059641 ID=TCONS_00059641|Name=TCONS_00059641|organism=Clytia hemisphaerica|type=CDS|length=1794bp|location=Sequence derived from alignment at scaffold_329:653518..659074 (Clytia hemisphaerica)
NAGGCTCCTTTCACGTTGAAGAGTGCGTATCATCGGGTCGGACATGTATG
ATAACAAGTCCTGAAAGTTATATGCTTTAACAAAATAGTTGGCATGCGCC
ATTTCTTCTTCAGTAGTTTTACATACACAAACGTGAAACATACCAATACT
AGACTCTGAAGAATCTTTGCTTTGGTCTGAAACATTTTGTATTACATTTG
ATTGTTCATTTGAAGAGTCTTTCTTTTTCCACAAAAAAGGTGTGGCAACA
GCTGGTCGCAAATCAGAGGTTGAACCTCTTGAAAtgttctgttttgaatt
tttttgattgaataaattTTGCTTATTGAATACCCTTTCATCAACTTGTT
TGGGGTTGCTAGCACAAGAAAAGTCTTTCAGATAGGACTCACCATAAAGA
TTTGCTTGGGAATAATCTGTTTTTTGTGCCTCCTTTTGATATGTTTCCTG
ATTAGTTTCATACTGATTTTTATTGTTCTTCAAGATTGAATTAATTTTAT
TTGGAGGTGCTGTTGTCATTGATGAAGTTTCACTTGCAACTGCCTGCATA
ATAGGTGGATATGAATACTGAGGAAAGTTTTTATACTCATTCCTCAAAGA
AACTTGATCCCTGTTAGATTCCATATTGGTATATAAATTTCCTTCATTTG
ATTGGTGCCCATAAAATTTGGGGTTAACAATAATGTTTTGCTTTTTCTGT
TCATCATACAAGCTTGGACGATCATGAACTTTGTATTGTTGATCTTGTTT
TGTTTGATAAGTATAGTCAGTTTTAGTTACATTACTTCTTATATTATGGT
CTCTAGAAGTGACACTTGATGTTTCTTTTTGTCTATCATGTTTTTCCCAA
TAGGGATTGTCTGTGTTTTTCTGATAAATCGTTGCACCAGCTTGAAAATT
AGCTGTTTCTGTTGTTTTACCGTGATTAGAAAAATGTTTATCATGGGAGT
AATAACCACTTCTGACTGCAGCTTGTTGTTGAGTTTTAGCTCCATAATTA
GACATTTCCATTGCTCTATCTGGATCTGCGTATTTGTTGTGATACGAACC
ATTGTTTCTAGCGATACTTTCCGGATCTCTAAAATTTGTTTCTCTTTCTC
TCTCAATACCAGGAGGTTTGTTATGATATGAATAATCATTTCTGATTGTT
CTCTGTTGATCTTGCGCTGTATCTTTTGCCCTTTCCTTCGTAGGGTTATA
ATTATTATATTCATTTTCTGTTTTATCTGTGCTTTCTTTCTGGTCTTTGA
ATGCAAAATTTCTTGTTGATTGCTGTCCATGGTGCTGTTCACCTTGTGAA
GAGTAGTTTATTTGATGATATGGGTCATTTCTAGAAGCTGTGTTTTGTTG
TCTATCccaatcaaattttgaatgTGATCCATCTTTAGGTGGGTATTGTT
GGGAATTGTATGTATTTTCTGTTCTAGCATCAGTACTTTGCCATTGACCT
TGATTGAAGTTATGTGAGTTTGTGGTTGTGGCTATTTGACTAGCAGAGTA
GGGAATAACTGGTACTTGCTGTTGCTGAACTACTTGTGGCGTTTGATTCA
ACGAAGCAGGGTGGATCTTCACAACACCAGGAGCTTGTAGTACATGTATT
GTAGGATGAGATATAATTTGCTTTGATACAATAGGCTGAATAAATTGATT
AGGACGAACAACATTAAATCTAGGCACTTCATTCAGCGATATTATTCTTG
GTGTAGCTTGACCACTTTTGACAACTGGTNTGCCCgagggattaacaaat
aacgagtgtgtaacgtGCCGCGAGAGTGacatcaaacgctccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037521XLOC_037521Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059641-proteinTCONS_00059641-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059641-exon-scaffold_329-1491911889:653518..659074TCONS_00059641-exon-scaffold_329-1491911889:653518..659074Clytia hemisphaericaexon
TCONS_00059641-exon-scaffold_329-1510915933:653518..659074TCONS_00059641-exon-scaffold_329-1510915933:653518..659074Clytia hemisphaericaexon
TCONS_00059641-exon-scaffold_329-1575043694:653518..659074TCONS_00059641-exon-scaffold_329-1575043694:653518..659074Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:653518..659074 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.77659 1.61254 1.45308 1.13738 7.42387 4.79395 3.94414 4.13774 1.73447 2.06351 2.06354 1.71461 1.67144 1.49455 1.42826 1.50348 1.75038 1.6495 0.979393 1.11496 1.97434 2.28601 2.01362 2.30741 2.87478 4.19194 0.739948 0.439647 2.17013 2.66289
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059641 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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