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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059640 ID=TCONS_00059640|Name=TCONS_00059640|organism=Clytia hemisphaerica|type=transcript|length=1071bp
aaaaggtacAATTTCCAATATTGCATTATTATTGCACCAAGTTAGTTACC
ATAATAAAAATAACTAATATTTATGAGACCTAtatttaacaaaagaaaaa
cattcaagaaaattgaaaatgcaaAATGAGCCACACGAATATTGGTTCCG
GTATCAAGATATGTTATGTTATAGAATGATATTATGTTGTTGTTTCAAAT
GGTCGACTATGACAAGATGATCAAAAAACAGATTGCTGACTATCAGCCTC
ACTTAACCTagtaaaaaaatcaacaaagaacTGCAAAGAATCCTGTGAAA
CAATTAGCATTATGTAAAGATTGCATTATGAAACATTATTTGGATATAGT
TTGCTGGTGACAactgaaaatcaatttgtgagtTTGCATCTTGGTGTAAC
ATTCAATTATTGTCTGTCCCCacttaaaagagaaaaatgaagaaacttAT
GAGATTGATTTTTTGGATAACGATGTAGTTTATGACTATAATAGACATCA
GACATAGTATTAGACATCGGGTCATTAAGTCCAGTCCTTTTGCTTTATAC
TGTATGTACAGAATGGAATACAAAAGGAGTGGATTCGAACTGGTAATTAG
TAACCCCTGGTGTGTGGCACTGATAACTTGGTTCCCGCACTTTATAGAAT
AAAATGTAAATATGATATCAAAATTAcaaagattttatttcaatatggaa
aaccttttaaaaaataatgatgTTTTAGACAATAGAATGAGTCCGGAAGT
GCGAGTGCCTCTTTAACGTCCGAGTTAGATTCGTCAAGATGTTAAGGACG
ATTGCCCTACATAAGCTGATCCCAAAGGGGATGATTCTTACGTCGTATGA
TGTTTTGGTGTTGTTTTGCATCAAAACCTATTTATATACATACCGATAAA
AGATGCATTGCAGCTATCCCAGAATGTTAAAAAAACAATATGCTTTGTTT
GTGTTATTCGACTATTTTAAATATATAACCTAAGGCTGTTATCATAGTTC
TTTTATATTTAAAGACTATTATTTCACTTATTGTAAACCTCTATTTATTA
TGTACTGTCTTCAATCTAAAC Run BLAST on NCBI transcript from alignment at scaffold_329:645499..646569 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059640 ID=TCONS_00059640|Name=TCONS_00059640|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at scaffold_329:645499..646569 (Clytia hemisphaerica)
GTTTAGATTGAAGACAGTACATAATAAATAGAGGTTTACAATAAGTGAAA
TAATAGTCTTTAAATATAAAAGAACTATGATAACAGCCTTAGGTTATATA
TTTAAAATAGTCGAATAACACAAACAAAGCATATTGTTTTTTTAACATTC
TGGGATAGCTGCAATGCATCTTTTATCGGTATGTATATAAATAGGTTTTG
ATGCAAAACAACACCAAAACATCATACGACGTAAGAATCATCCCCTTTGG
GATCAGCTTATGTAGGGCAATCGTCCTTAACATCTTGACGAATCTAACTC
GGACGTTAAAGAGGCACTCGCACTTCCGGACTCATTCTATTGTCTAAAAc
atcattattttttaaaaggttttccatattgaaataaaatctttgTAATT
TTGATATCATATTTACATTTTATTCTATAAAGTGCGGGAACCAAGTTATC
AGTGCCACACACCAGGGGTTACTAATTACCAGTTCGAATCCACTCCTTTT
GTATTCCATTCTGTACATACAGTATAAAGCAAAAGGACTGGACTTAATGA
CCCGATGTCTAATACTATGTCTGATGTCTATTATAGTCATAAACTACATC
GTTATCCAAAAAATCAATCTCATaagtttcttcatttttctcttttaagt
GGGGACAGACAATAATTGAATGTTACACCAAGATGCAAactcacaaattg
attttcagtTGTCACCAGCAAACTATATCCAAATAATGTTTCATAATGCA
ATCTTTACATAATGCTAATTGTTTCACAGGATTCTTTGCAgttctttgtt
gatttttttactAGGTTAAGTGAGGCTGATAGTCAGCAATCTGTTTTTTG
ATCATCTTGTCATAGTCGACCATTTGAAACAACAACATAATATCATTCTA
TAACATAACATATCTTGATACCGGAACCAATATTCGTGTGGCTCATTttg
cattttcaattttcttgaatgtttttcttttgttaaataTAGGTCTCATA
AATATTAGTTATTTTTATTATGGTAACTAACTTGGTGCAATAATAATGCA
ATATTGGAAATTgtacctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059640-exon-scaffold_329-1491911889:645499..646569 | TCONS_00059640-exon-scaffold_329-1491911889:645499..646569 | Clytia hemisphaerica | exon |
| TCONS_00059640-exon-scaffold_329-1510915933:645499..646569 | TCONS_00059640-exon-scaffold_329-1510915933:645499..646569 | Clytia hemisphaerica | exon |
| TCONS_00059640-exon-scaffold_329-1575043694:645499..646569 | TCONS_00059640-exon-scaffold_329-1575043694:645499..646569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:645499..646569 . |
Blast
The following BLAST results are available for this feature:
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