TCONS_00059547 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059547
Unique NameTCONS_00059547
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1650

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059547 ID=TCONS_00059547|Name=TCONS_00059547|organism=Clytia hemisphaerica|type=transcript|length=1650bp
GTNGCTTACCATTTGTTACCTGAGAATGTCAAATTCAATATGGTAGCTTT
CGGTGAAGAATATTATGAACTTTACGATGTGAGTCATAAGAAAACAAAAG
ACGTGAAGCAGAGAAACGAAGTTGTCTCCTTCTTACAGCCAATCCACACT
AATATGGGAGGAACGCATTTTTGGAAACCATTGAAAGCTATTCATTTATT
GTCGTCGTCCAACCGaccgaaaaatattttcttgttctCAGATGGCCATA
TAAGTGACGAAGTCTCAACGTTGGCAActatacaaaaatatcaacagaAT
GTCCGCGTTTTCACTTTTGGATTAAGTTCGACCGCCAATAAACACATGCT
CCGAAAGATAGCTAACCAAGGTTGTGGATGGTACGAATTCTTCGATAAAG
CCGCAAAATCAAAGTGGCAAGATAAGGTTGAAAAACAGATGGAGAAAAGT
CAACAACCAGTATTGAACAACATTCAAATCTTATGGAAACAACATGAAAA
CGAGGCTCCCAAACCTCTACAGGCACCGCATCAAATCAATGCTTTATTCA
ACGGATCAAGACTTGTGGTTTACGGATTTGTTCCCTATTGTACCATGGCG
TATCTTTCATCAACAGTGAATGGCAAAGAAGTCAACACCATGGTTTCTAC
GACCGAATTGAATACATCTACTGGACTTtCATTCCATCGTTTGACCGCAA
AAGCAATCATTAAcgattttgaaaatggaatattaCATACAGACCGCAGT
CAACACGAGGCATTGAAGgatgaaatgaagaaaaaaattatttctttgag
TATCGAATACTCAATCGTCACACAATTTACGAGTTTTGTTGCCATTGAGG
AGAGAGAGGAGAACGAATGCAAGGACGACACCGCACCAACCATGTTGGAA
ttggttgccatggaaactATTGATATCCTACCGTATATGGGTTTCGAAGG
TCAACAGAAATCACAAGATGAAGAGAAAGAGatGGATGGTATTGATTTTG
AATTGGATGAAGTTGAAACAGAAGAAGAGGAGAGTTGTGAAAGAAGAAGA
TCAAGATCCAGAAGAAGATCAAGGTCCCGAAGTAGATCAAGATCTCGTGA
TAGAAGCAGAGCTGGTGAAAAGAAGGAGAAAAGGAAAGCGTCAAAGAAGA
AGTCAGAGCGTATTTCTTCGTCGTCTTCATCGGCATCCTCATTGTCTGAC
AATGAAATGTTATCTTCCAAGAGACGCTCATTGTCATCGCATAGTTCAGA
TTCCGGTTCTGGAGATTTTAACGAGTTATTTTATCAAAGGAGTCCTGCAT
TTACACGCTTTAGCAGACATCGTGTATTGAAAGCAGCAGCTGGAGAACCC
GAATCAATGGGTTTTGATGATCTATATGATGATGTTGTTCTTTGCCATGA
CGAACCACCACGTGTATTGAAAGCAGCATCTGGAGAGCCCGAACCAATGG
ATATTGATGATATCTATGATGATGTCGATTATGATCTTTGCCAAGAAGAA
GCTGAAGGTGAATATAAAAGCATGGCAGCTTTGAAAAACGTGGTCGAGCT
TGATTATACGCACATGTGTGATGCAATAGCACCTCCTATATATGAATACG
AATGTGCTGAATTAAGATCCAATAAAATGGCACtgtttgatgatgatgat
Run BLAST on NCBI

transcript from alignment at scaffold_329:516350..532157+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059547 ID=TCONS_00059547|Name=TCONS_00059547|organism=Clytia hemisphaerica|type=transcript|length=15808bp|location=Sequence derived from alignment at scaffold_329:516350..532157+ (Clytia hemisphaerica)
GTNGCTTACCATTTGTTACCTGAGAATGTCAAATTCAATATGGTAGCTTT
CGGTGAAGGTTAGTCTCCTTATCCTCTTTCCCGATTAATAAATACGGTCA
TCTCTCTTTCTGGTAAAAATTCTGGCCATGATCTTGTAGGATCTGATAAG
ATCCCGGGTCTATTTAAAGCTCGCTGGTTCCATTTAATATCGAAACATCC
ATCCTGGATGGCAtaaaactttgagtatgaaattaacttaaatcgttttc
tttatTCATAACCTAGTATATAAAGCTCTGTTACCATCAACATTAACACT
GAATACTGTTATTGGTTTTTGCTTACACAAAGTATGACAAAGTATATATC
TATGTTTTTAGTCCTTTGTGATATCATCTACCATGTTTCCACTTCTAATC
TCTAATTTTTTCCACTCTTTTTAGAATATTATGAACTTTACGATGTGAGT
CATAAGAAAACAAAAGACGTGAAGCAGAGAAACGAAGTTGTCTCCTTCTT
ACAGGTACAAACCCACTTTTAGCACTGCAAAATGTCAGAATTCGGTGAAA
ACAGAGCTTTAACGTTTTTAAAtcacatttttaaaattcagtacAGATGG
TTGCATCGCTCGAAATAAGTTTTCAGCCAGATCGCCAACAATTCTATTTG
ACGTAGGCACATGTCGGAAAGttaaaaagataaatacaaatttaaaaaaa
tcgttTTTGCCAAAACATAAATTACACAATCTCGTTTCCAGCTCTATGAT
CCTTACTAATGGCGCTAGTTAATATGATATTCTCTGGCGttcatcagtaa
cgtaaataaagcctagaATACACAGGACGTGGTTGTTAATTATGTCATTT
CTAATTACAGCCAATCCACACTAATATGGGAGGAACGCATTTTTGGAAAC
CATTGAAAGCTATTCATTTATTGTCGTCGTCCAACCGaccgaaaaatatt
ttcttgttctCAGATGGCCATATAAGTGACGAAGTCTCAACGTTGGCAAc
tatacaaaaatatcaacagaATGTCCGCGTTTTCACTTTTGGATTAAGGT
AAGAACATTAATTCAAACATTGGttgccaaatatctcaaaccatctgatt
atccctttaccAGCAATTCAAAACTTATTAGAATAGCGGCAAATAGCATG
TTGCCATTAACCCATAGTCTCctcccccctggattcagggagggggaatg
ggttttgaggtcaaaaagatgtatagaaataattttttttgaagccaggg
tgGGGGAAAACGAGGTggggggatggaaaattttcattctaggcatgggg
ggaactcaccaaaatcaattcaaaattgaaaaacatctggttttatgaga
tgaTGTCGTGATCAAGAATTTTCTAGGGAACTACCTTAAAGAACTTACCT
TAGGGAAAAAATAAGCGTTAAATTCAGCAAATTATAGCTTTTTATgcttg
aggggggggggcagagaaatttttggaggcgggggggggaaaaatggggg
gggggggggaaaaaaaatttttgggaagggggggggaaaaaggggggggg
ggggggggtagagaAATTTTTGGAAGCAGGGTGGAGAAAAATGAGGAAgg
gattgaaaattttcattctaggcatggggggaaGAGACCCTGAAGGGCAC
TATGTAACGTAGTTCCCAAGCAAATAAAAGTGAAACTTAAGCTTTACACT
GTATTTTGGGAGGACTCAAAAAATTTAGTACTCTTTTTGTTATCGCGCag
cacattttttgaaatcatgcaataaattttttctctaatCCGGTCTAGTG
TTTAACTGAAAACCACAAGGGTCACGCGTTTTGGCTTTATTCTCTCTCCA
CGGTCTAAGTATTCTTTGGAATAGACAATGTAAACCACCGAAATAAAAGG
CATATTATGAATTTGAATATAAgcaactagccggtacccggtgtcgcacg
ccggttaagctgtaactgaacgcactaaaagtcctttggatgttgaagct
ggcttaaaaaacgatcaaatgaaaaaaaaatattttcaaagtttgactct
agccTTCCCCcggaaattaatgaaaattctCTCTATTATCTCCAGTTCGA
CCGCCAATAAACACATGCTCCGAAAGATAGCTAACCAAGGTTGTGGATGG
TACGAATTCTTCGATAAAGCCGCAAAATCAAAGTGGCAAGATAAGGTACG
GCTTTCAATTCTTACAGATTTTGTTTTCAACTATGCGTTGGTTCTGTTTG
GtttctcatcaattttaaatcaCAAAATCTTTTATTAGGATTGAGTCAAA
CAAGCTATTGAGAGCTTAGTTACTCCAAACGTTAATTTCGTACTCAATTA
TTTCTTTCCaatcttttaaagaaaacaaCTCAATCTAAACTTTCTTGTAA
GAGCTCTAATATGGGAAGATTTTTAGTGGGTTTTTTGAGAAACTTTATAC
GGCAATCAAGGATTTCTCATGAttaatttagatatttgaaaatacttttt
gaCAAACCATGAAGCCCATTGAAATCATATGCTGTAGTAAGGCAATCATT
TTAGAGTCTAATTATTTGTCATGTTTTTCTCTCATtcaagtaagtaagtc
tgtgacTGCAGTTGGATGCGACCTTAATGCTTCTTTTCCGATAGCAAcat
ctacccaaaggtagggtagggtaccactctttctcccttgatccttctct
ttaatGTCTTTAATTGCTTCGTGATAAGTACTAAGAAGGATTGAACCCAT
GACCTTGCACACCGTAGCCAAACGATCTACCTTTGCACcgttgagtttaa
agcccaaagggctagagtaaaatctctttaatatttttaaatctagcgat
agattttagttttaatctggtgtttgtgtaaaaaaaGACGCGCGAGCTtt
ctggatggaaaataagtggtttcatttcccatccaagagtctcgagtcta
gccctttgAGCTTGGGAGTCAATGCTTTTCACTACGGTCGCTCCTCTTTA
AACGTTTTTTCTGCCACCAAACATTTTCATAGCCGTTTTGCGGACATCTT
TTTGAANAACGTTTTTTCTGCAACCAAACATTTTCATAGCCGTTTTGCgg
acatctttttgaaagaaaatgtacACCAGCGCATCACAAACGCTTCCAAG
GTTGTACAAACAAAACATTATCATCAAAATATCATCAGATATTTGAATGT
TTACAACTTGTAGCCAAAACATGACTTGGTCTGGAATGATAAAACATATC
AAGTAACTGACGATAAGCAATGATGGGATGAAAAAGGCTTTCAGGTTTTT
CTTGATCacgaaactttttcttttctgccGCTGATGCCTGTCAGTTATTA
ATGATCCTTCTGTTTTGTTTGATGACGTTTGGCTGTTTGAGTGTAAGTTT
GGCTCCACATGCGGGGTTATGGCAGCCACTCTTCGCCTTACTTGTCTTGT
TTTCTTGAAGAAGTACATATAGACCACGAGAGATGTTATCAGAAATATAG
ACCCAATACTTGGCCATAATATGAGTACTGCAAAATGGTATATAGTCATT
TGGTCATAAATTTGGCATAGTATTACACTTATAAGTGATGCCACGATTGT
AAAAGCTGAagaaatttggtattttcttaTTGTGCAGTATAAGTGGTACC
GTATGCTTAAATAAACTGATAGAAATCGATCGATAgtcaatgacgtcata
attccaACGTACCAAATGAAGATTGAGACTCCTTGAAGGTTGAATAAAAT
TATATAGGCTTTAGTGTAAGGCCCTTTATACATGTGAACAAACATGTTTG
CGATTCCTAGAGTTGAAAGTATGATATGAAGAATGGATAACTGCACTAGA
TGGAACTTTTGAATGTCGGTGAAGTGAGAATTGGTTCTTGTTTTGAATAA
GATTGCGAATCCAGGAATGTTAAGAAGCAATGCTGTAATGttgataataa
ttgatgtccaACTTTAGATTTCTAGCATCTCTGGAGCTATGCTTTTTCCA
GCAAAAAGTCAAGTGATAGGTTgtttataagttttttttctgcTTTTCAA
GACTATTGAAATTGATGATCGTACGAATAATCTTTCTGGAATgggcgatg
gccaagtggtcaaaggcgccagcgtctcaaaccagggattcgtggttcga
atccccgctccttccaatgttccgttcagttcttAGACAGCCGAGTCGGC
tagccgtggaccccgtgaaaacaatcgaaagacttcTGAAAGTCATAGAT
TACTGGggtatccacgtaaaatatcgactctattcGTTGCAACATGAACA
CCGTATGAAGAATCCATCGAGATCGAAATATATACATATCTTTTGCTTAA
TTATTTTTTCTCTACAACCTTGATGAAGTTTATTTTGCTATTTATCAAGT
TTTGATACAATGAAGATGTCAATTAGTTTTAATAAATACaatcaatgttt
agaaaaattaatcagaaaaattcaattttctttttttgcaaattaaGAAT
TCAAATATTCACACTTTACATTATTTAAATCTTTAGTTActtaaattaaa
actttttaatctGTTAAATCTTTAAGAACCAGGataacccgggggggggt
aggtACTAGGTTCGAGAGATGACGGGTATATCCGagccaaaaatctaaaa
tcgacccttagagagaggaaaaattggcgtttttgggacccttagagaga
cttttctcaaaatttttaacGATCACGACCCTTTTAGAGAAGAAATAatg
aatttcgtgatttttggacccttacagagacttaattttctttttaatgg
tttttgtacccctttgagagactttcgagggtgtgaaaaggacccttatg
gctcgcacatacctggcacccattttgcctaagtacctccGCCCCCAAAC
AGGGTAATAATATTTaggctaaaatataagaacataaaccCTGAATTTTT
AAGTAAATGGGTAAGATTGCGATCGCAATCGAGGGCTACcagaaggctcc
cttttctctagccctctacctgaaggtaggggagggcgccagtCCTTTCG
CTGGATTTCTTCACacacccttgatccgtctctttatttgctgagcatca
agcagagaggcatcaagtaccattttgggagaatctttggtatgactcgC
CCGAGGGTCGAGCCCACAACCTTGTGCACCGTAgttggatgctctacctt
catgctacggttgCTACTGAATCTCTGAATCTATAATAACAGTGTTTAAA
GCTCATCCGAACTAAAGATTTCGAGCAAATTCGTATTATCTACAAAAGCT
GTCTGAACTAAGTTCAAACCCTGCTATAGGTAtatatgccctccgatgca
tcggaatgggtcctacccacgatggaTTAGGAAtgacagcgcaagcagac
attacAACCCTGCAGATGtgagctgccgagccatggcgtataccatgaca
ctcgaactacacgggagaacgggtgtcctcgcaggtgtagaaccGCCTAA
GTGTATcagcacaccacaatgtctaGAATATttacccatactcttgtatc
agagttatgataccctattcccctcacatggcgtTGAGTTAacccgggcg
aaggagcatTCACTTGACAAGTGAATCGTAGTGTCGCTGTGAGTATCGAA
CTCTAGCCTTCTGGACAGAAgtcaagcacgataaccactataccatttat
gccttgctttgaccactgaaaAAAGAACATTTCGGATATGATGTATTTCT
TGTTGTAGGTTGAAAAACAGATGGAGAAAAGTCAACAACCAGTATTGAAC
AACATTCAAATCTTATGGAAACAACATGAAAACGAGGCTCCCAAACCTCT
ACAGGTAAATGTTATTGTCAACTTCAAAACTCTatctccaattttttttt
ccatatACCACTATTGACGCCATTAAAACTCTGCGTATATGTAACGGATG
ACAACTTCGGCTGATAGAtcagcgtccgagattcaaaaaaggccttaaac
AGGTTTTCGTATGGCgtcccttagatcagggcaaattttttttcacctgc
agttttcgagtgaatcgatttttagtgaATCGGtaacggattgtatctag
cggttctttTGTTCTTGAGGACGgcactttttgaaatttagcgatagatt
ttactttcaatctggcgtttgtgtaaaatccAAAAGTTTCTACTCTAGCC
CCTTtggggcttgaaactcaattgTCCATTTATTAGGCAccttagaaaat
tttttatattcCAGGCACCGCATCAAATCAATGCTTTATTCAACGGATCA
AGACTTGTGGTTTACGGATTTGTTCCCTATTGTACCATGGTAGGtaattt
tgataataaaaaaatcgTCGGATTATTTTAAGCAGCGCATTATTGTCTTT
TAGATGTTTATTGACACTGTCTATCTGATAAAGCGTTGAATATACGACGG
GCAAGGTTGAACATAGCCTGGATATCAAacctcaaaatttttgaaaaaac
atacaacagttctaaaattatagatcttggtctccctagagaatgaaagt
gcaaacccatgtttccaaaactttcctagctAATCCAGGGcagaaaaaca
gaaattaataaaaagcagccttacaagatataaaaccatttaaaacttCC
AAAAATTACTCCAGAGTATATAAACAAGTTTGCacgcattatcatgacca
accatgtcatgttttcttggaaaatgaaactTGCCTcactgttttcttct
ttttcatgttttcatgtaacggAAAGCtgtatcttcactagcaagtggag
gGTTATcctatttttgtttcagaatcACTCTGTGCCATGTAGATCGGtcc
ttacggttttagcgaagtgagcgcaagcaagtggactgcattctcatatg
agaatgtaaaacgctctagggagaccaggctgtaaaccagaacataaaat
atgaaaaactagactgtgaaatagtctACAGCCTGGATATTCAAGCTAGG
TTGAACATAAGCATTGAGCATAAGTGGTGAGTGTTGGGGAGATATGGgtt
tgacggtgtgacggtattTTGGTGATGAATATACCACGAGGTGACAAATC
AAAGGTTTCAATCTTTGACGATAATTTGcaaagaattgtcatttctgtGT
TGTCAAACGAAATGAAAGCAATTATATTGCTAATTATTGGGTATAGCGTT
ATTTTTAACCATTTGAATagcttttcattttatttcaaaacgaTACAAAA
CCGCCATATGTGAGCCGTATGTTaacctagaaatctaagctagtttgatt
taGTCACTAGGATAAAACTGATGGTAAGCTCTGACTGAATAACTATCCCA
ACAGTATTCCAAGgtaaacttaaaatccgtaaatataaaaaaatataaaa
aagccCGAAAAGCTATGTTGCCattagccgtgtgtcctagccttgtgaat
acgtgCTTAGTTTACTAGGCTAAAACCGCATGATAAGTTTCAGTACAACT
TTGGACTTATTGTAAATCGATTTCATATTTCATACTCCTCCAGGCGTATC
TTTCATCAACAGTGAATGGCAAAGAAGTCAACACCATGGTTTCTACGACC
GAATTGAATACATCTACTGGACTTGTGAGTTTTAGATAGCTTTCAAAGGT
TCTTTTAATATCTTATTAAGAAGTAAGCACCGTATAAAATTTATAGTTTA
TAGCACGAAAGAATACAAGTCTGTTTTCTTCTATCTGCCGAAAGTGCTCA
ATGGTATCAGAGCttgttcaaattaaaagaaagaaactttgatttattgt
ttagaattttcattttcataccgcccgtatggacgacaatcatcttttta
actttatttcttttttcttcatttttcatcttcattttctgaattatttt
tcttaaaaattataGTGCTACGAATTAtctttttaaggctttgtttttaa
ataagagtgatatcgtttgctttcATCAATTTAAATTCACAACCTTTTTC
ACATTgcattgacacggatgtggagcaagattggccagaaCGAGGaaaag
ataaacatttttttgcttatatcagcataatataacaataggtagacact
gtcctgatatgaaatatgtgtctgatatatgaaacgggaacacttatgta
aaaataaagccTTTAACGGTATTTTATGATATGTGAGGATTGaagtattg
ggctcttccagaaaaaaattaaatattgggggttgaggatataacatttt
ttggggATTTACTCCCGGATTTTCGACCCCCGGACCaacatcagttgacc
ccccggacattcaaaattacccctaaacagagCGAATATGCCCttaaaac
aaggcaaattttgcagatttttcactacccccggataatatatccaatat
atccCCCACCCCCGATGTAGAAAagttttctggaagagcccattggtCGA
AAAATGACAGGCACAGCAAAGATTAGTGCGCACTTGAAGCAAATGGACTT
CAGTTttacatttcaatattttttagtCATTCCATCGTTTGACCGCAAAA
GCAATCATTAAcgattttgaaaatggaatattaCATACAGACCGCAGTCA
ACACGAGGTATCAATTTCATCTTATGTTACGGCAATCTCTGAGAGATTAA
CTTATAAGAAAACGGTCATTTTATAAAATCTGCGATTGAATTCCTTGATA
GGAATCGTTAAATCTTTTCGAAATATTCATATTACCGTCCAGTTCAGACA
GGATAtggccactgacctttatatatccctggaccaagctatatccgcca
tctttgatcgaagttttttttgaagtaGTATCTTCCGGACGAAGATATAT
AAACtatttgttatgatttttatacGAACCACTCTTGTCTTAAAGAATTC
TAATTGAGTCTCTAATTCAAACTCGAACGAGGAATCTAACTTGTTCgaat
tttatagaaattttacGGAGGTTTTTCTCCACGACGGGAACTGAGAATCG
ATTcgattatagaaagattcgaataatcgAAATTCGAATGAGCGAAAGTC
CACTGTATGTATTCTTTATGTAAAGAGAAATTTCTACAGAAACTAACCAA
TGCTAACTTAcagtgttgcaacttttccgtctgtagacggatatccgtcc
agttgagatacaaatatatcattttcGTCTTGCCAGTAAGAGGCTTTTTG
GTTCAAATGACCATCTAATCCTAAGGTTTCCGTCCATATTCACAAAACGT
AGTTGCAAAACTGTTACTTAAATTTCTATGTTTACATCAGGCATTGAAGg
atgaaatgaagaaaaaaattatttctttgagTATCGAATACTCAATCGTC
ACACAATTTACGAGTTTTGTTGCCATTGAGGAGAGAGAGGTATCtatata
ttttcattgtttataaTCGAATNctatatccgccatctttgatcgaagtt
ttttttgaagtaGTATCTTCCGGACGAAGATATATAAACTATTTGTATTG
ATTTTTATACGAACCACTCTTGTCTTAAAGAATTCTAAttgactctctaa
ttcgaactcgaacgagGAATCTAACTTGTTCGAACTTTATAGAAATTTTA
CGAAGGTTTTCTCCACGACGGGAACTGAGAATCGATTcgattatagaaag
attcgaataatcgAAATTCGAATGAGCGAAAGTCCACTGTATGTATTCTT
TATGTAAAGAGAAAATTTCTACAGAAACTAACCAATGCTAACTTAcagtg
ttgcaacttttccgtctgtagacggatatccgtccagttgagatacaaat
atatcattttcGTCTTGCCAGTAAGAGGCTTTTTGGTTCAAATGACCATC
TAATCCTAAGGTTTCCGTCCATATTCACAAAACGTAGTTGCAAAACTGTT
ACTTAAATTTCTATGTTTACATCAGGCATTGAAGgatgaaatgaagaaaa
aaattatttctttgagTATCGAATACTCAATCGTCACACAATTTACGAGT
TTTGTTGCCATTGAGGAGAGAGAGGTATCTATATATTTTCATCGTTTATA
ATCGAATTTAATCTCATAACAAAATCATCACTTGTGCTAGCAACATACTC
CGTTTCAAAACACCCCTCCTTCTAACTGagccggtaggattttttcagcc
agtggggatgaaaataatggactgaaactcgatggggattgatattctca
tatttttttatggctaaggatttaaattcttttttttttcaaggcaaaaa
attCAGTGTTGATGTCTTATtattttgcagcgaggatttgttcttggttt
atttgattatttccaggggggggggcaaaaattggaggataatattccac
cggggacgatatttggGCCAATTTTTCAATGGGGAAGAGTCCCAGTGGGT
CGTGAGAAGGGGTGTTTCAAAGGGATGCAGTGAACGTGATGATCTTAAAT
ACTTTATTTAATCGCGTTGCCCTAATTTTATTATCGATGTTTGGCCTCTG
GTGCAATTGTTTTTTCCTCGACCAATGGTTTGTTTGCATTTAATTAGTAT
CCATGCAGAGGGAGGGGGtcgacgaaccttttcaagccaatagcaaaatt
ttcaaaaagaactcTTAGAAAAATCCTTCATACCTTAAattgagggtgga
cgaactaaaatctgTCTTTTACCCACTGGAAGttttagcataacttttta
CCTTCTAGAAGAATATAAAATCTTCCTTAGATCCTCTTGAGACTCTTTCT
TCGTTCGGATTATCCTCGGGAAATGTTCATTCATTTCTGGCActcccctg
tatggatataaaatggaaggGCCCAATTACATTCTATAAGACttgaaggg
ctagatatcgtgctttagctgaaaagtgtgccgtggttcgGAGGGAAATC
CTACCAAGGTCATGTggcattacaatagaatttcagcgcttgaccaatca
gaagcttcgcaggttttcgaaaacaaaagcaacaatattttttgtgatat
ttcctttttttgctGGAAAAAGCTTAAAACACTCCATCTACAATCCTGGC
CAAAAGTAAATGGAATTCCACCTATTCTGCTGTTTTTTTGGCTCCTCTCC
CTCTTCCCTCTCTCTACAATGTTGCTGAGTCAAGTTGGACTGAAATTCAA
GGTAAGGTAAAAAGGTAAAGGGGGGAACTTGTGAATTCATACCAAAAAGT
GAGGAATTCCATTACTTTTGGCCAGCCTTgcagccctttgggctttacag
aaatctgtgattCTGACTTCCCTCTCTCATAGGAGAACGAATGCAAGGAC
GACACCGCACCAACCATGTTGGAAttggttgccatggaaactATTGATAT
CCTACCGTATATGGGTTTCGAAGGTCAACAGAAATCACAAGATGAAGAGA
AAGAGGTACAGGGGTGTAATGTaataaaaacaactaaaatctggcggact
gtaccgcctaagcaaaagcatattaccatatactaccgggccacttaatc
gcgccatccaatttatcaaaaagctttaagtggaccccgggctaatgATT
AACCCGTGTTGATTTCAATTTATCGATTTTCTGATGCTTTCATATCTTAT
CAGACCTTTTAACGCCGGTTCTAAAATAGCACCAACCCCTTTTACGGCGG
GCCATATTACACAATAAAGCTCGATTTAATTTAATTCCGATCCCTTACAC
CGACTCCTATTACGCTAGGGACAAACAAATAACACAAATGAGGACCGGCA
TAAAAAGGAACGATAAGGGTAATAGAGTGTTTGCCTGAAAATGTTGGGAA
TCCTNttcgcaggttttcgaaaacaaaagcaacaatattttttgtgatat
ttcctttttttgctGGAAAAAGCTTAAAACACTCCATCTACAATCCTGGC
CAAAAGTAAATGGAATTCCACCTATTCTGCTGTTTTTTTGGCTCCTCTCC
CTCTTCCCTCTCTCTACAATGTTGCTGAGTCAAGTTGGACTGAAATTCAA
GGTAAGGTAAAAAGGTAAAGGGGGGAACTTGTGAATTCATACCAAAAAGT
GAGGAATTCCATTACTTTTGGCCAGCCTTgcagccctttgggctttacag
aaatctgtgattCTGACTTCCCTCTCTCATAGGAGAACGAATGCAAGGAC
GACACCGCACCAACCATGTTGGAAttggttgccatggaaactATTGATAT
CCTACCGTATATGGGTTTCGAAGGTCAACAGAAATCACAAGATGAAGAGA
AAGAGGTACAGGGGTGTAATGTaataaaaacaactaaaatctggcggact
gtaccgcctaagcaaaagcatattaccatatactaccgggccacttaatc
gcgccatccaatttatcaaaaagctttaagtggaccccgggctaatgATT
AACCCGTGTTGATTTCAATTTATCGATTTTCTGATGCTTTCATATCTTAT
CAGACCTTTTAACGCCGGTTCTAAAATAGCACCAACCCCTTTTACGGCGG
GCCATATTACACAATAAAGCTCGATTTAATTTAATTCCGATCCCTTACAC
CGACTCCTATTACGCTAGGGACAAACAAATAACACAAATGAGGACCGGCA
TAAAAAGGAACGATAAGGGTAATAGAGTGTTTGCCTGAAAATGTTGGGAA
TcctttgttgattctttaaaaggGTGTAAGAGTTACTCTTCACTTTTTTT
CCCAATCACGACATATAACTATAAAATTAaagaactgttttttttttcct
tttgaagatGGATGGTATTGATTTTGAATTGGATGAAGTTGAAACAGAAG
AAGAGGAGAGTTGTGAAAGAAGAAGATCAAGATCCAGAAGAAGATCAAGG
TCCCGAAGTAGATCAAGGTAGCTTCTTATTTATTTGCTAAACATTACAAC
CTGATcttgttggacctacctggaggtcctataaatcaACCCAGTCCGTT
CGAGCGTTtgtgtgttagttaccagcttttctcaagattggctcatgcaa
attttctgatttttgaaaaagaaagttttaccCAAATTTAGGCAGAAAAA
CGGCTAAagaacaggttttttggacgtTGTGAAATATtgtatcattaatt
ttttctgattttttgcatgaaagtaggtaagagatggctcaagcagattt
tctcagaaaaaaaaatttcggctCAAataacgcatctttatctaaaAAAA
TCACTATCCCTTTCAGTGCAGCAGTCAGTGCagtcgttatttttttctga
ttttttgcatgaaagtaagtAAGAGATGACTCAAGCAGATTTGCTCAAAA
CTTCATTGGAAGTTTGATTTTGAACTAGATTTCATTAAATAGCACAGTTT
GAATGATTGAAATATGTTTCAAAGATGAATTATCCATATTTCAACTCAAA
GTAAACACATATCACTTATattatttctgatatttttcaaaaaataaagc
taAATGAGATGGTAAGCTCTGTGGTCGCTTTTtttccgtggcaaataggt
cgaaccttaaaaaatacgaacggcagttaaagtgctatttataagcatac
atcaatgttcttagccaaattactcatttttttgatgagatagatgttca
tttttgctcacgaagtcttgaataagAAAGGATAGTTGTGTTTGAGCATG
AAATtcttggtttctaaacgtgttttttattagaaacaaacgactaattt
taatatatCGTCACTATttctgttctgaatgattgtttaatggtcatgct
tacgtagatatcaattatatatgtctTCCTTGACCTATTGCCTGGATTTT
CAATTCTTTGACATTTTCCTTCTTTTAGATCTCGTGATAGAAGCAGAGCT
GATNTCTTCCTTGACCTCTTGCCTGGATTTTCAATTCTTTGACATTTCCC
TTCTTTTAGATCTCGTGATAGAAGCAGAGCTGGTGAAAAGAAGGAGAAAA
GGAAAGCGTCAAAGAAGAAGTCAGAGCGTATTTCTTCGTCGTCTTCATCG
GCATCCTCATTGTCTGACAATGAAATGTTATCTTCCAAGAGACGCTCATT
GTCATCGCATAGTTCAGATTCCGGTTCTGGAGATTTTAACGAGTTATTTT
ATCAAAGGAGTCCTGCATTTACACGCTTTAGCAGACATCGTGTATTGAAA
GCAGCAGCTGGAGAACCCGAATCAATGGGTTTTGATGATCTATATGATGA
TGTTGTTCTTTGCCATGACGAACCACCACGTGTATTGAAAGCAGCATCTG
GAGAGCCCGAACCAATGGATATTGATGATATCTATGATGATGTCGATTAT
GATCTTTGCCAAGAAGAAGGTGAGctgcaattttttttaataacaatcac
ataaaaatcaatcgaagttAGTTTCGtgattcttaacatttttcatattg
ttcttttgaaatattcttgagTGCTTCTAAAATTTTCGGCCAAAATCATG
GCTCTCTCAGCTGTTCAAAACTAGTTCTTCTATTACACATGGAATGTGCT
TTTATCAGAATCGGAGTTTAGGTGAGATATATATGGTCAATCTTTCTGTT
TATAGCTGAAGGTGAATATAAAAGCATGGCAGCTTTGAAAAACGTGGTCG
AGGTAACAcaagtttattttcaatttctattGATTCCATCGGGGCTCCAT
TCTCATTTTATATACCTTTGCAGTGAAGTTTCGTCATCGATTTTAAGGAA
AGTAGACTGATTATATTGCGGGGTGATTTATTATTTTGTATTTCATTACT
TCATAAAATAGATTGTTGGAACTCCGttgaaatttaaattaaaaacccTT
TAGGATTttattggtccagcgcgcagcagaatggacctttaaaaagcaac
tgatcgaaaagattttgtctttgtcggggcctgtgcgcgcaataaattaa
caagtccagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAcct
acccgcgcgatgtttgacctatgttttggattgaattggtagtagagtca
aatttcccggttagattaaagggttgtttcaggtagggtcaggtagggtt
agggctagggttggggatgggagttaacccctggttagggttttagcccc
cgggtagagtttggagtaaaaaccatgtttataaggaactttgaactcct
taatgcagttgtgactcgatggctgagtggttaaggcgctggcgttctaa
tcaaaggtgctttgtatatagtgggttcgaatcctaTCAGtggcaaaaat
ttcgaaattacGGGCTAAGCATCAAtaactttcaaaacttagcaatacaa
agaaagtgtcaaagaataaaagctcagagtggaggatgggaatgaatttt
tttgcgtcacttaaggaacccggtacgaacgacattcggttatttccacg
tcagctggaccttcacgccgctccggcttcttgtttcTAGTAATAAAGAA
agtatgctgacaaagcagaattaacgtatgaatttctcaaaatttaattg
CTCGTGCGCCGAAAGGggagaaaattgttttttcttttgttcaaaaaaat
gcttaatcagcaaatggtaggagatacgttaaataacatttcaatttcat
tctcAGCTTGATTATACGCACATGTGTGATGCAATAGCACCTCCTATATA
TGAATACGAATGTGCTGAATTAAGATCCAATAAAATGGCACtgtttgatg
atgatgat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037469XLOC_037469Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059547-exon-scaffold_329-1491911889:516350..516407TCONS_00059547-exon-scaffold_329-1491911889:516350..516407Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:516350..516407TCONS_00059547-exon-scaffold_329-1510915933:516350..516407Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:516350..516407TCONS_00059547-exon-scaffold_329-1575043694:516350..516407Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:516774..516853TCONS_00059547-exon-scaffold_329-1491911889:516774..516853Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:516774..516853TCONS_00059547-exon-scaffold_329-1510915933:516774..516853Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:516774..516853TCONS_00059547-exon-scaffold_329-1575043694:516774..516853Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:517210..517397TCONS_00059547-exon-scaffold_329-1491911889:517210..517397Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:517210..517397TCONS_00059547-exon-scaffold_329-1510915933:517210..517397Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:517210..517397TCONS_00059547-exon-scaffold_329-1575043694:517210..517397Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:518445..518544TCONS_00059547-exon-scaffold_329-1491911889:518445..518544Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:518445..518544TCONS_00059547-exon-scaffold_329-1510915933:518445..518544Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:518445..518544TCONS_00059547-exon-scaffold_329-1575043694:518445..518544Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:522108..522203TCONS_00059547-exon-scaffold_329-1491911889:522108..522203Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:522108..522203TCONS_00059547-exon-scaffold_329-1510915933:522108..522203Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:522108..522203TCONS_00059547-exon-scaffold_329-1575043694:522108..522203Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:522614..522688TCONS_00059547-exon-scaffold_329-1491911889:522614..522688Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:522614..522688TCONS_00059547-exon-scaffold_329-1510915933:522614..522688Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:522614..522688TCONS_00059547-exon-scaffold_329-1575043694:522614..522688Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:523893..523973TCONS_00059547-exon-scaffold_329-1491911889:523893..523973Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:523893..523973TCONS_00059547-exon-scaffold_329-1510915933:523893..523973Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:523893..523973TCONS_00059547-exon-scaffold_329-1575043694:523893..523973Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:524876..524956TCONS_00059547-exon-scaffold_329-1491911889:524876..524956Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:524876..524956TCONS_00059547-exon-scaffold_329-1510915933:524876..524956Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:524876..524956TCONS_00059547-exon-scaffold_329-1575043694:524876..524956Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:525640..525738TCONS_00059547-exon-scaffold_329-1491911889:525640..525738Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:525640..525738TCONS_00059547-exon-scaffold_329-1510915933:525640..525738Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:525640..525738TCONS_00059547-exon-scaffold_329-1575043694:525640..525738Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:527632..527754TCONS_00059547-exon-scaffold_329-1491911889:527632..527754Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:527632..527754TCONS_00059547-exon-scaffold_329-1510915933:527632..527754Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:527632..527754TCONS_00059547-exon-scaffold_329-1575043694:527632..527754Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:529107..529216TCONS_00059547-exon-scaffold_329-1491911889:529107..529216Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:529107..529216TCONS_00059547-exon-scaffold_329-1510915933:529107..529216Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:529107..529216TCONS_00059547-exon-scaffold_329-1575043694:529107..529216Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:530259..530668TCONS_00059547-exon-scaffold_329-1491911889:530259..530668Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:530259..530668TCONS_00059547-exon-scaffold_329-1510915933:530259..530668Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:530259..530668TCONS_00059547-exon-scaffold_329-1575043694:530259..530668Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:530905..530951TCONS_00059547-exon-scaffold_329-1491911889:530905..530951Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:530905..530951TCONS_00059547-exon-scaffold_329-1510915933:530905..530951Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:530905..530951TCONS_00059547-exon-scaffold_329-1575043694:530905..530951Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1491911889:532056..532157TCONS_00059547-exon-scaffold_329-1491911889:532056..532157Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1510915933:532056..532157TCONS_00059547-exon-scaffold_329-1510915933:532056..532157Clytia hemisphaericaexon
TCONS_00059547-exon-scaffold_329-1575043694:532056..532157TCONS_00059547-exon-scaffold_329-1575043694:532056..532157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:516350..532157 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.256073	0.0147195	0.548057	0	0.751622	0	1.66514	1.78001	1.31015	1.59129	0.728335	2.30999	3.18763	2.08696	1.05162	1.61464	0.895548	1.72222	0.768455	3.40408	1.79008	0.893083	0.527506	0.497918	1.90541	0.954923	0.806762	0.319127	0.0869086	0.485241
Blast
[Close]
BLAST of TCONS_00059547 vs. Swiss-Prot (Human)
Match: PARP4 (Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 1.563e-77
Identity = 130/317 (41.01%), Postives = 194/317 (61.20%), Query Frame = 1 
Query:    4 AYHLLPENVKFNMVAFGEEYYELYDVSHKKTKDVKQRNEVVSFLQPIHTNMGGTHFWKPLKAIHLLSSSNRPKNIFLFSDGHISDEVSTLATIQKYQQNVRVFTFGLSSTANKHMLRKIANQGCGWYEFFDKAAKSKWQDKVEKQMEKSQQPVLNNIQILWKQHENEAPKPLQAPHQINALFNGSRLVVYGFVPYCTMAYLSSTVNGKEVNTMVSTTELNTSTGLSFHRLTAKAIINDFENGILHTDRSQHEALKDEMKKKIISLSIEYSIVTQFTSFVAIEEREENECKDDTAPTMLELVAMETIDILPYMGFEGQ 954
            A  L+ E  K N++ FG  Y EL+       K +        F+      MG T FWK L+ + LL  +   +NI L SDGH+ DE  TL  +++ + + R+F  G+ STAN+H+LR ++  G G +E+F+  +K  W+ ++E QM +   P  +++ + W+Q   + P+ LQAP Q+ +LF   RL+VYGF+P+CT A L + +  KE  TMVSTTEL  +TG   H+L A+A+I D+E+GILH + + HE  K  +K  II LS E S++TQFTSFVA+E+R+ENE      P + EL+A E +D LPYM ++G+
Sbjct:  902 ALSLVGEKQKVNIIQFGTGYKELFSYP----KHITSNTMAAEFIMSATPTMGNTDFWKTLRYLSLLYPARGSRNILLVSDGHLQDESLTLQLVKRSRPHTRLFACGIGSTANRHVLRILSQCGAGVFEYFNAKSKHSWRKQIEDQMTRLCSPSCHSVSVKWQQLNPDVPEALQAPAQVPSLFLNDRLLVYGFIPHCTQATLCALIQEKEFRTMVSTTELQKTTGTMIHKLAARALIRDYEDGILHENETSHEMKKQTLKSLIIKLSKENSLITQFTSFVAVEKRDENESPFPDIPKVSELIAKEDVDFLPYMSWQGE 1214
The following BLAST results are available for this feature:
BLAST of TCONS_00059547 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PARP41.563e-7741.01Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=... [more]
back to top