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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059517 ID=TCONS_00059517|Name=TCONS_00059517|organism=Clytia hemisphaerica|type=transcript|length=281bp
GTAATGAATAACATTTTGGCCTTATATTTCTTCATCAATGTAATTCAATA
TGGCGAAACACAAATTTTACGAAGGGTGGATGTAAGCACTGTCAACAACA
AAGTTGAGTATGGCTATGTTAAAATGGTATCGCACGACAATCACATTCTC
AATGTGACAGCAATCAACATATCATACCACAAAACTTCCCAAGAATGCAT
TCGAACTTGTCTCAACTTTACAAATTGTTGGAGTATTAATTTGAAAGAAC
AGCCAAATAATGAGATTTACGAGTGTCATAT Run BLAST on NCBI transcript from alignment at scaffold_329:365088..367248+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059517 ID=TCONS_00059517|Name=TCONS_00059517|organism=Clytia hemisphaerica|type=transcript|length=2161bp|location=Sequence derived from alignment at scaffold_329:365088..367248+ (Clytia hemisphaerica)
GTAATGAATAACATTTTGGCCTTATATTTCTTCATCAATGTAATTCAATA
TGGCGAAACACAAATTTTACGAAGGGTGGATGTAAGCACTGTCAACAACA
AAGGTGAAATACTTCGTTTATCTGACTCAATTTTTACCTAGTCTTGTACA
TTTGTGTTGTCTCTAGGTGTAATTTGACCAATATTGAACTTATTGAACTG
CAAAATTTATCAATATCTCAAGTTTGATCTCATTTTATCCTGAGTCTCTT
CCATTTGTTTTTGTGTCTATTCTGGTTTCTTTTAAGTGCATTTTTCAGTA
TATTCAGTGAAAACCAGGttttctgcataatttatgataatttattttgT
AGTTTCTAGTTTATATCAATTTTAGTTTGATAGCCGACTTGGTTCATATT
AACATTTCCTagctatttttcataattttagtaTTTATGGCCAACTTGGT
TTAGATTTTCTATAAATATGGCAGCTTGTCCACTTTTCTTCAGAGTTCAG
TTGACATGTAGCACTCAGAGAGTCAACACCTCAGGACATAGTCATTTCTC
Acataaatttcaaataatataaacataagtcaatcaatgatagtcttcaa
atcattttgacattttagatTCTCCTTCACAGTTCTTTCACTCTGGCAAG
CTGGTAAGCATTATTTAGTATTTACTATTCAATATATTCCCTCTTGTTTA
CTTTAATGTTTCTCTCTTGTATGCATGATACCCTAGTCTCATATACTCTA
GACTTTGTTTGATATAGACTTAGTCTTagaatttattcatttttgttttt
tcataaaCTAATTTTGAATCTTTGTTTCTATTTAGTTTGAATCCTTGTGA
TTACAAATATACGTCAATGAGAATCCTCAATGGCGAACTCCATGCAACAC
TAGGTGCGTTagtaaacaattttgaaaaccatacacgttttttgtaagaa
catccaaaatttttgaatagccTTTgcatgttcttaaatttttgagttgt
aagtctaaaaaaatattcttaacatattcttattttaccatTTTGAGAAT
ACTTTTGCCCCGCATTTCCTTAAAAAATGGGTGTTTTGGAATCTGCAAAG
CCTTATGTTCGTAACTTGTTCGTGATTTTTgttcatcgaagccttatgtt
cttatatagttttttcttatataaaaaaacgtgtagtccaTGTAAAAAAA
ATGGGACCCCTTTGTTTCTCTCCATTATGGTTAACATCGAAcattatttg
ttttgtttaacaTTGATAATTGACCAATCCAATTGAATTTTATTTCAACG
CAATTTTAAGTTAGATACAATGGAgatcaatggaaagaaacaaaaggctt
ccagggttttttatacggactatagAAAAGCGGATActtttaatttaagt
ttttcaaaatttaccaaacagtctctttctgttttcataaagttataaat
tgatgttttttgcttccaatgatggtacatcaaagaaaagccgctttgaa
tagatttaatacacctatttcctattagcagattcatgcaaaagtcacga
aaaaacgtcgagtaaacaaactttggattggcggaggcatgcaaagatta
cctcatactctggacattttgaaaaatatgcttatatatgcaatatttca
gccaatcagagactttctcgacgttttttgtgacttttttacatgaatcc
gctaataggaaatacgtgtatttatataaaagatttcaacgaccatttag
atccataccgagacgttttctctacatctatatctttattacctccatgg
aaATACATACCTATATACGGTAAAAATCCATTTCAAACGAAAAAATTCAA
GTCCTTTAAGCCATGAACTTAAAACCTATTCACTTTAAGCGACCATAAGT
CATATCAGCATAATTAGAGTTATTCTCTTGAGAGTGGATGCAAGAAAGAG
TGACAGTAATACTGTAATTGCATTAGTGTTCAGTTGAGTATGGCTATGTT
AAAATGGTATCGCACGACAATCACATTCTCAATGTGACAGCAATCAACAT
ATCATACCACAAAACTTCCCAAGAATGCATTCGAACTTGTCTCAACTTTA
CAAATTGTTGGAGTATTAATTTGAAAGAACAGCCAAATAATGAGATTTAC
GAGTGTCATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059517-exon-scaffold_329-1491911889:365088..365190 | TCONS_00059517-exon-scaffold_329-1491911889:365088..365190 | Clytia hemisphaerica | exon |
| TCONS_00059517-exon-scaffold_329-1510915933:365088..365190 | TCONS_00059517-exon-scaffold_329-1510915933:365088..365190 | Clytia hemisphaerica | exon |
| TCONS_00059517-exon-scaffold_329-1575043694:365088..365190 | TCONS_00059517-exon-scaffold_329-1575043694:365088..365190 | Clytia hemisphaerica | exon |
| TCONS_00059517-exon-scaffold_329-1491911889:367071..367248 | TCONS_00059517-exon-scaffold_329-1491911889:367071..367248 | Clytia hemisphaerica | exon |
| TCONS_00059517-exon-scaffold_329-1510915933:367071..367248 | TCONS_00059517-exon-scaffold_329-1510915933:367071..367248 | Clytia hemisphaerica | exon |
| TCONS_00059517-exon-scaffold_329-1575043694:367071..367248 | TCONS_00059517-exon-scaffold_329-1575043694:367071..367248 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:365088..367248 + |
Blast
The following BLAST results are available for this feature:
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