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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059461 ID=TCONS_00059461|Name=TCONS_00059461|organism=Clytia hemisphaerica|type=transcript|length=1521bp
aacccgaatgccgtacatatacgcAATTTGATGGACACGTTTTTCTCGCG
CCATATCTTTTATTGGCTTGCTTGGTAATCgttcagaaaaaaaagaaaaa
taaagtaaagAGTCTAAGCTTTCCGTTTATATACaatgatgtaatgttat
gaTCTTTCGAAGAAAAATACTTATTCAAAATGGCAGacggaaaaacactg
atttctgAGAAAAGTGACTGATGTTTGGAAAGCCATTGTGAGCAGTAGAA
TTTTTTTGGATGCTAATTTTTGGTATATGGCTTCAGGAGTAAGTATATAA
TGATAAAATACTAAAGAAAGATTTAATGATAAAGTTTCCCCCATTTTTTT
GCATAGGAagtaaaaaataccaaaaaaacgaggaaaaaaattttggtaaa
tGGAGCTACCATTTTAGTTAGAGTACTTCatttgaattggtacccaacCT
AAAAGCTGCAGAATTTAATTAGCAAAAGATTTCTAGTTCTTGAGTCATGA
CAAAATAACCGAACATGTCCATTTCTCAAAAAAGTGTTGCGGGTGGACGg
cgtaaaaatataaaaaacagcaGAGTGGAAAGGTTAAGTGAAATGATAAT
GACAAATCTTCGATTCCATAAATGGCATACTTCTTGTGAACTACTTCTTG
GACTTGGTTGTTTGTTTTGTATAATGGTTGAACCTGCTTTTAAGGGAAAA
AGAGCAAATGACACCTGAAATTTGACAGTTTCTACCTCAACCATGCTCGC
TGAGTACGTGTAGGCCAGAATTTAAGAACCCACACTAACCTAATTAAAGC
ATCTAGATATACCATAGAAATGTGTTTGGTGGAACAAATGTGATTTAGAA
GCATTCAAATTTATTTAATAAATGACACTTTAGATAATTCTTTACTGGAT
CACTCTTTAGGTATGTAATACATACTCAGTGTGTACCATACCCCCCTAAA
GGCCAAACCCCTAATAATTGAGACTTTTTCAACCCCCTTTATACATAGTT
GTCTGagaatttgaagacccccccccccctaaacatAGGGGGATGAAACT
ATGTACTGGCCTTATGTACAGGCGAGATAACACACAGAAATTCGGAGGAA
TATGATCAACCACACTACCGAAACCAGTCATCAAAGAATCTAATTCACAA
AATTCAAACCACAAACCGAAAGAAGGAAGAAGGAGAAATGAAatggtaat
tttcatggaagGATATGAGGAGAGGAAGGCAAAGCGAGTCGAGTCAATAA
TGAGGAGAGAGGATCTGTTGTTTTACTTTCAAAACGCGGGATGGTGTCAC
ttaaccttttcagcccggcAGACGTGCATACacgtcgagcatacgttccg
ACAGACGTGTATAGTCGtttttttgacatagtgatattctaagctatatt
tctccgattggcttctttgccagccgtagaagtaaagagaaacggaaagt
agaggttctaagctttcttttgatatatggtgatgtaatgttttgatcac
gtggtGAGGCAGCAGATTTCG Run BLAST on NCBI transcript from alignment at scaffold_327:197274..198794 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059461 ID=TCONS_00059461|Name=TCONS_00059461|organism=Clytia hemisphaerica|type=transcript|length=1521bp|location=Sequence derived from alignment at scaffold_327:197274..198794 (Clytia hemisphaerica)
CGAAATCTGCTGCCTCaccacgtgatcaaaacattacatcaccatatatc
aaaagaaagcttagaacctctactttccgtttctctttacttctacggct
ggcaaagaagccaatcggagaaatatagcttagaatatcactatgtcaaa
aaaaCGACTATACACGTCTGTcggaacgtatgctcgacgtGTATGCACGT
CTgccgggctgaaaaggttaaGTGACACCATCCCGCGTTTTGAAAGTAAA
ACAACAGATCCTCTCTCCTCATTATTGACTCGACTCGCTTTGCCTTCCTC
TCCTCATATCcttccatgaaaattaccatTTCATTTCTCCTTCTTCCTTC
TTTCGGTTTGTGGTTTGAATTTTGTGAATTAGATTCTTTGATGACTGGTT
TCGGTAGTGTGGTTGATCATATTCCTCCGAATTTCTGTGTGTTATCTCGC
CTGTACATAAGGCCAGTACATAGTTTCATCCCCCTatgtttagggggggg
ggggtcttcaaattctCAGACAACTATGTATAAAGGGGGTTGAAAAAGTC
TCAATTATTAGGGGTTTGGCCTTTAGGGGGGTATGGTACACACTGAGTAT
GTATTACATACCTAAAGAGTGATCCAGTAAAGAATTATCTAAAGTGTCAT
TTATTAAATAAATTTGAATGCTTCTAAATCACATTTGTTCCACCAAACAC
ATTTCTATGGTATATCTAGATGCTTTAATTAGGTTAGTGTGGGTTCTTAA
ATTCTGGCCTACACGTACTCAGCGAGCATGGTTGAGGTAGAAACTGTCAA
ATTTCAGGTGTCATTTGCTCTTTTTCCCTTAAAAGCAGGTTCAACCATTA
TACAAAACAAACAACCAAGTCCAAGAAGTAGTTCACAAGAAGTATGCCAT
TTATGGAATCGAAGATTTGTCATTATCATTTCACTTAACCTTTCCACTCt
gctgttttttatatttttacgcCGTCCACCCGCAACACTTTTTTGAGAAA
TGGACATGTTCGGTTATTTTGTCATGACTCAAGAACTAGAAATCTTTTGC
TAATTAAATTCTGCAGCTTTTAGgttgggtaccaattcaaatGAAGTACT
CTAACTAAAATGGTAGCTCCatttaccaaaatttttttcctcgttttttt
ggtattttttactTCCTATGCAAAAAAATGGGGGAAACTTTATCATTAAA
TCTTTCTTTAGTATTTTATCATTATATACTTACTCCTGAAGCCATATACC
AAAAATTAGCATCCAAAAAAATTCTACTGCTCACAATGGCTTTCCAAACA
TCAGTCACTTTTCTcagaaatcagtgtttttccgtCTGCCATTTTGAATA
AGTATTTTTCTTCGAAAGAtcataacattacatcattGTATATAAACGGA
AAGCTTAGACTctttactttatttttcttttttttctgaacGATTACCAA
GCAAGCCAATAAAAGATATGGCGCGAGAAAAACGTGTCCATCAAATTgcg
tatatgtacggcattcgggtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059461-exon-scaffold_327-1491911889:197274..198794 | TCONS_00059461-exon-scaffold_327-1491911889:197274..198794 | Clytia hemisphaerica | exon |
| TCONS_00059461-exon-scaffold_327-1510915933:197274..198794 | TCONS_00059461-exon-scaffold_327-1510915933:197274..198794 | Clytia hemisphaerica | exon |
| TCONS_00059461-exon-scaffold_327-1575043694:197274..198794 | TCONS_00059461-exon-scaffold_327-1575043694:197274..198794 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:197274..198794 . |
Blast
The following BLAST results are available for this feature:
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