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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059409 ID=TCONS_00059409|Name=TCONS_00059409|organism=Clytia hemisphaerica|type=transcript|length=1188bp
tttcacccggctggtttccggaaacactacatctttttattttcgcctaa
tcaaatataaaatttgCGTATCATCTTTGTCTTTCAAATCAGGATTGGCT
CCTTTGACCAACAaccatctgatgacgtcatgattgttTTATCATGCTGC
ATAATGCAATGGTGTGTCTTTCCATTTGTTTTTCCATTGATCAACATTTC
GATGGTTTGTTGATCGAACCTTTCCAAATAGCGAGCATTTCCATTCAAAT
CAACATTATGGAGAACTTCCTTACTTTATTAATTCTTGAATGCTAgctca
tttttgaaaaaagtcactATCGAGTGTGACACATTTTTCCTTTGTTTAAT
TTACAAGAAATCCCATATCGACAATCAAACTCAAACCTAACGAGTCTTTC
ACTCGTAAAATAAgacaatcaaataaaaaaaatcactttcattttttttc
ttataaaaaaactcaaaattagcAATAGGGAATTTTATAAGAAGTTAGAC
GTGATTTAGAAAGAACCTtgtaaaaacttaaaaaacacTCTGATACAGCC
GATATACTGTATGCTTGTAAagacaagaaataaatcaaatattTAGCATT
CAAGTTCTATCtatttaaaatcataaaataaattataaataatTAACCGA
AAACTTTTGAAGATAATCGTGTTTTCTATTCATGTTTCCAAGAACATATA
AATGTTCTGCAATAATCATTTAAGTCAGTTTTTCTGATcatatgaattaa
aaaaagttatgttgATATACTTTTGAATGTTTAGATATAACAATTTGTTA
CAAAATATTACTAAGAATATTATACAACAGCGTACGAACAAGCACCAAAG
ATGACCAACAACCGCTCTTGTTGTCTAGACCTAAAGACAAAGATCGAAAA
TGTGGtgttttctggaaatttttatttgttgccAGAATTTTGCTCCATTA
AAGGTAAAATTCCAAAGTGGATATTGAAACCACCTTTTTGTCATGTAAAG
TTCACTTACCATCTTTGTCTTTCTTATCAGGATTGGTTCCTTTGAGAAAC
AAcaatctgatgacgtcatgattgttTTTTTATGCTGCATAACGCAATGG
TGTTTCTTTCCATTTGTTTCTTCCATCGATCaactttttgatggtttttt
gatCAAGCCTTTCCACATAACAAACATTTCCATTCGAG Run BLAST on NCBI transcript from alignment at scaffold_327:200175..201362+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059409 ID=TCONS_00059409|Name=TCONS_00059409|organism=Clytia hemisphaerica|type=transcript|length=1188bp|location=Sequence derived from alignment at scaffold_327:200175..201362+ (Clytia hemisphaerica)
tttcacccggctggtttccggaaacactacatctttttattttcgcctaa
tcaaatataaaatttgCGTATCATCTTTGTCTTTCAAATCAGGATTGGCT
CCTTTGACCAACAaccatctgatgacgtcatgattgttTTATCATGCTGC
ATAATGCAATGGTGTGTCTTTCCATTTGTTTTTCCATTGATCAACATTTC
GATGGTTTGTTGATCGAACCTTTCCAAATAGCGAGCATTTCCATTCAAAT
CAACATTATGGAGAACTTCCTTACTTTATTAATTCTTGAATGCTAgctca
tttttgaaaaaagtcactATCGAGTGTGACACATTTTTCCTTTGTTTAAT
TTACAAGAAATCCCATATCGACAATCAAACTCAAACCTAACGAGTCTTTC
ACTCGTAAAATAAgacaatcaaataaaaaaaatcactttcattttttttc
ttataaaaaaactcaaaattagcAATAGGGAATTTTATAAGAAGTTAGAC
GTGATTTAGAAAGAACCTtgtaaaaacttaaaaaacacTCTGATACAGCC
GATATACTGTATGCTTGTAAagacaagaaataaatcaaatattTAGCATT
CAAGTTCTATCtatttaaaatcataaaataaattataaataatTAACCGA
AAACTTTTGAAGATAATCGTGTTTTCTATTCATGTTTCCAAGAACATATA
AATGTTCTGCAATAATCATTTAAGTCAGTTTTTCTGATcatatgaattaa
aaaaagttatgttgATATACTTTTGAATGTTTAGATATAACAATTTGTTA
CAAAATATTACTAAGAATATTATACAACAGCGTACGAACAAGCACCAAAG
ATGACCAACAACCGCTCTTGTTGTCTAGACCTAAAGACAAAGATCGAAAA
TGTGGtgttttctggaaatttttatttgttgccAGAATTTTGCTCCATTA
AAGGTAAAATTCCAAAGTGGATATTGAAACCACCTTTTTGTCATGTAAAG
TTCACTTACCATCTTTGTCTTTCTTATCAGGATTGGTTCCTTTGAGAAAC
AAcaatctgatgacgtcatgattgttTTTTTATGCTGCATAACGCAATGG
TGTTTCTTTCCATTTGTTTCTTCCATCGATCaactttttgatggtttttt
gatCAAGCCTTTCCACATAACAAACATTTCCATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059409-exon-scaffold_327-1491911889:200175..201362 | TCONS_00059409-exon-scaffold_327-1491911889:200175..201362 | Clytia hemisphaerica | exon |
| TCONS_00059409-exon-scaffold_327-1510915933:200175..201362 | TCONS_00059409-exon-scaffold_327-1510915933:200175..201362 | Clytia hemisphaerica | exon |
| TCONS_00059409-exon-scaffold_327-1575043694:200175..201362 | TCONS_00059409-exon-scaffold_327-1575043694:200175..201362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:200175..201362 + |
Blast
The following BLAST results are available for this feature:
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