TCONS_00059388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059388
Unique NameTCONS_00059388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length932

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059388 ID=TCONS_00059388|Name=TCONS_00059388|organism=Clytia hemisphaerica|type=transcript|length=932bp
TagttattgaaaaaatatttgaatgaaaGCAGAAAGCATAAAAAGAAGAT
ACTTGTTTACTAGCAATTGATATAATTTTATGGCAAGATATCATCATGTT
GAGAGGTGATTTTGGGAGGGTGGTAGTCAGAGTGATTCGGCAAGCCAAGC
ATCCACCACCAGGAACAACATGTTGCCATCATCAAAGTACACATCCTCAA
CGTCTCCAAAGATACCAACATCTTCGGCAATATCACCAGAACTTCTTTTT
AATCACCACAAAACCTTTACACAGATGCTACCCCGGATTCCCCGGCCATC
ACCAGAACCTATTGAAAGCGCACCAAAGGTTCTCAACGCCTACGTACCAA
CAGAGACGTCACCTAATGATTTTGAGGATCTTAAGGGCTGCTACTAAAAT
CAGATATATTTTTCTCGGTGCTGCCGGTACAGCTGGAGTTGGAGCGAAGC
TGACATATAACAAATGGCGTGACAAATGGTTAGAACTACAGGAACAAGTA
CCACAACTCGGCTGGATCTCTCAATATTACCCTAACGAGTTCATTGATGA
GCTAcagcaaaatttcaataaaGGCAACGAACAAATGTTGGAAGGTTTAG
AAGCCATGAAAAAGCTGTTCTTTGGCGTCGCAGGAGATGTTGCAGAAACA
GAAGTGCAACCACCTATCGTTAACGCTAGTTTCTTCACGTCAAACGAAGC
GGACGATCAAGAAGGGAAAGCCAGTGCTGGTGCAGGCGATGACGACGATT
CTGATCTACTGACTTCTGAAGAACAAAAGcttcGTGAACTTTTAACGAGA
GCGCAACAAGAACTGCTCGAGATGCAGCATAAATTTCAAAAGGAGCTTGA
TAAGCTGGAGCACGAAAATCGTGAAttgagaaaagaaattttgatggATA
AAAGTAAAGGCCATACACATCATAGGAAAGTG
Run BLAST on NCBI

transcript from alignment at scaffold_327:27920..44556+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059388 ID=TCONS_00059388|Name=TCONS_00059388|organism=Clytia hemisphaerica|type=transcript|length=16637bp|location=Sequence derived from alignment at scaffold_327:27920..44556+ (Clytia hemisphaerica)
TagttattgaaaaaatatttgaatgaaaGCAGAAAGCATAAAAAGAAGAT
ACTTGTTTACTAGCAATTGATATAATTTTATGGCAAGGTATGTTTCAATC
TTTTTACGATGTTATTTGGATTTGTCGGTGTTCTCAGAAACAGACAATCT
CTGGCAGATTTTGATGTTATGATCAATTTACAGCCATTCTTATTTTTGTC
AGCATTCGGCTATTGTCGACGCAAATGCCGACGTAATAGTGCTTACTGTA
CTTTAGAATCCAGAATTTTTTGCCGACGCAAATAAATCTGAATTAGAAAG
GCTGATTTATACTTCAATCTGTGGTGTTTGCATAGTTTCTACTCCCCACT
AGCCTAAGGGGAGGGGGTCTAAGATTCAAGTATTTTTGTTAAAGGTTTTA
GCTTTAACCTAAGACATGGGTAGTagtattttatgaaaatgaaattttca
tcttGAAGAAAAATAATTCCTTCTCCTGCACTATAATTTCAATTGAACTT
TCTTAAGAGAGGAGATCACTTAAAGGGGGTCTCCCTACTTAAGGGACCCC
TCAATAAACTATGATCAGGTGAAAAGGGGCCTCCTTGATCTGTTTTAAAT
TTAACTTCCTTTCGCTATTCATTACTCCTCATTAAAGTAACTCCTTATTA
GGGGCTATTTATTATAGCTCCTTAGGGCTGTGCTTGAAAGTTGCAAAAGC
CATATTAATGCACACTTAGGGCAGGGTACAGCATATTATAAAGACTCAAA
GACAAAATATGCAAAATGTTATGGACATATATtgtaaataaaattgattt
ttcaaataaaaattggaaattgTATGAATTACCAGCCCAGCCCCCAGTTG
GATTACTTAAAACATAGCACCCTCTTTTTGAGGTAGCCCCTAACAATAAA
AAGCCcccaaacaagaaaaaaagatttaaccCCTCCCCCAATAACTTAAA
GGAGCAGGGTATTTTATGAATTTCTATAGATGGGTCAACCCCAGTTTTAC
ATTTCCTCGATTataatgatgatttttttgtcTTGTTTTTAGATATCATC
ATGTTGAGAGGTGATTTTGGGTAAGAATTCTTTCCCTTTCTTAATTTTCT
AAATATCTTGTATATAAGAGTTTGTGGTCATGCTAACAGGATTTAGTATA
GAGGTCTTGTCTTAAAAGAACAACTAGGACAGACAAAGAAGTTTTTTTGG
CCTACAATACCTTCGATAGTGCCAATCAATCTTAGTGTCTttatctacac
gttttttcttttataaggaacacgtttataaggaacttcaGGCTGAAAAA
GGtctgaaaaataaggaattgttaaggaagtgctcaggctgagaataaga
aaacaagttgaGGAAAAGTAAGAGTTAAACTTGAACTTGTACATATTCAC
AAAAACCTAAACAAAAAGTTCGAattatcatcaaaatattgataaaacaa
CATTCAATAAACGTCTTTTTCTGTATAATATCAATCCTTTAGCACAACAT
CAAATCAGTCAAAACTTAGCAGCTAAGTGAATAaagaactcgataaggaa
cgtTGAGTTTGAAATTCTCTGGATCTGCTGGGATCAAAATTTATGACAAA
GATTCCAGGGGTACGACCCTTGCTGACCGACGGGGGTGTGCCGCTGAAGT
ATGAAAAATAGACCCTACAtatgggactcgtttttttttgaaaaaagtga
ccccttaatgggactgaaattccaaaattttctcaaaattttccatattt
ttataTTCCAAAGCCTCCCAAACAAAAAGTAGTACCCTatgagggactga
tttttctattttgttgtttttgcaaccctacctgggactcatggagTTGA
AAAAGGTACATCGACCAGCAGCACATCCCtgtacctctttttgcccaATT
ACCCCCTCCCCCTGGGACAAAGATTCTTCGTTTCATGGCTAAAAAGACTC
CATCATAAATTTACTTAGATCCAACACTGaatgattacacgtttttttat
aaggaaccttaacttagCTCGGGAATGAGTTTTTCAACGTGTCAATAAAA
ATAAGGGGAGTTTCACGCTCATAAACCTCTTGTCTTGCAGTATCTTGTGT
TATTCTCAGTtttaaaatgtaacttttctTTCTGATTATTTTAAGAATGA
AtataaaacctaaaaaaaaaattagatttttgagtattttccgTTCTAAG
AATAATCTGTCATTATCTAACGTAatcatattattattatatataatCAT
TATCTTATCATGAACATTATCGTTCTATCAATTCTAATGGCGTATAATTA
TCCTCCACTTTATAAACATACATTGGTAAAGCTGGTTTGTTATCATCCAC
CGATGGATCTTGACTTGCTATTAATAGTCCAATATCCACTACTGCAATTT
GTTGTGGCCTTTGTTGAAGTTGACGGTTTGGTTGTCTTTGAATACAATAC
GTGCTTCCTTTAATCTTATAAACCaataaaattatgataaaaatgATTAT
TGAAATCACAAGTACTGGAAATATCGGTTTGATTTTCATTGATGATGTTT
GAGGAACGTTCATTTTTGGTGGTTTTCCACATTGTTTTTCTTGACATGTG
GTGTATTTCTGATTAGTATGTACAATGTCTAAAGCGAACATAACGGTGAC
ACAGACTTGGCAAATGTGATTGATTTTCGAATCTCTGAGACGTATAGTTT
GATTCAAGGTCCTTTCTGTTGTAAGGTAATTAACTTCTACCCCATGTCTA
TTAATAAAGTCTGTCGATCGGTTTGTAAATGCGTATAGCTTGTCAATAAA
TAACAAATCCCAGTTGTATAATTTGAcatcaatttcaatcaaattGTTTT
TTAGCTGTGTATGCAATCTCATATGATGGACTCCATGCATACGTGAACAT
TTTTCATTGAgaatattttggtttttaacAACTAATTGTTTTGAATTATT
GCCTGTTGTTTTTGTATTACCCTCTTTGAATAGTGCAATTGATGTGAAGG
GGTAAAGTATATGGGGAACGTCACATTCCACTTCTACTTGGTCTAAGTTT
CTTTGATTGTCCCAGCTTTGACATTCGAACCAGTGTCTCTTCATGTCTAT
AACACTTGCACATTCTATATGATAAGTGAAGTTCACTTTAGACATCTTTT
TTAGTGTTGTGTACATCGTTATATGTGTCAGGTTGCTTTCTCGGCAATTG
AGAAATTCTTGATTAGAAACTGTTAATGTCTGGCTGAACACGATTTGACC
GTAAAACGATACGATATAGAGAAAGCAGAATTGTGATTTGACAGCAGATT
TCCATATACTTTTCATTCTCTATTTTGTGACTGTAAAAAGAAAGAcgtta
tttaaagatatgatggAATTGAAGCCATGTAACCCATACATTTTAAGCGT
GAATGTTAATGATACAATCAGACCTTCTAACATCTTAATTATACAGTGGA
GTTTCTTTATCTCGaacctctctaattcgaatgtctccttaaaagCTCAA
AGAAGTTTTCTCGACCTTTCAGTAACAATGTctcataaaccttactccat
aactcaaaatttccttaacttgaaAAAATTTGTGTTTCCCGTGCGTTTGC
GAGTTATAGAGACGTTGTATAGGTTACAAAAAGTATTCTCAAGCATTTAT
TTCGAAGCACTTTCGCCTTCTTCTTCAATCCGCTTTCTCAAAATCATAAC
CACTTCCCTAACCTTTTCGTCATAAGCACCTTACATAGGGTCCACCCCCG
CCCCAGAAATTTGGGGGACCTAAAAAAAGTGTTCAAAAAGCCAGGTACCT
GGCagtattcttaaatttaggggTATTTGATATGTTTAGGGGTACCAGCG
TTTTTATTAGTGGGGACGGGGGCTGTTGTTTTTATATGTAGTATTTTCCT
TGACTaacccaattttccaattttgaatcgaactttttcaattttgaatc
gAACCATAgatatctaaaaattttggaGGTATCAAAATGATTGGGGAACG
TAAATTTTTTTGGGGGTACCTGACCCTATGACCTTATCTTACTCTATGGA
ATAATACGTCAGCAAACATCATTTCTTCCCATCTAGTTGAACTAATGCAG
AAACTCgtcaatttctttgattttaacGAAATAAAAATCTTTAGCACAAC
TTCTTGATACATTTGAATTTCACTGTTGACTGATATTGACTATGAAGAAA
GTTTTAACTCTTCTAAACTTatctgttttctttttacaaagatcttcttt
attttttcccaCTAATCAACTGAGATCTCTCGACGACCACAATGCACAGT
AACTGTTTACTAAAAAGCACTAAATATAGAATATGTAGGAGAAAATATAT
GTATAAGTGGGGTAGGGAAAAAGTTGGGAAATAGTCCCTCGCGTCCTCAT
GTCTTCAGTGTTTTTCTAAAGCCTAAATTGCTTTTTTGAGTGTGAccatt
tcattgattttaatatttcttTAGTTTATAAAAGACCATCACTGAAACTA
AACATAAACTGGACGTGTAACTACACTCTAACTAAGAATAATTTGTTGTT
TCTTTATTCGGCTGGTATATGTCGCAACACTTGACATAAAAATCGACCAG
TCTCACTATGGTGCCAGTGACATTTGGTTTTAACCAAATGACTAAAAACA
TGACTAAAAACATGACTAAAAATAAATTAGCTAAATTATATTGTTATTTT
TCGTCTGTATTCCAAAAAAACTTCCCCTAAGCCTTTGGGgctattttttt
taatgtaagGATAAAAGAAGTCGATGTTTTGTTTTCTCTCAGACAGGCAT
AAGGGTTGACATTCGGAAGGTGATTTCTCCCCTTTACACCTACTTTCAAA
ATCAACCTCCCCCCTCTCAAACAgggtttttttatcaaacatttGCACTA
CTTAATCTACCTAACCTTTTGAAGGAATCATTGGAGGGAACCATTCCCAC
CCTTCTGTTTTATTTTATCATAGTAGTAGCAGTCTTTTGTGACGGTAGTT
TGAAGTGACCCCCAACGGCTATTATTGTCTAGCACTAAGCCCcgaggggg
ggtactagggttgcgagttgacgggggggtgccgcccgactttcgagctt
tggacccttaccgggactaaaaagaagaaatcaaaggaaaattttgggaa
ttttacgatccttagcgggacaaatttgaccaaattttgatctttcaggg
gatataaagtttatttttccgACCCTAGGGGgattgaagtttgattttct
gatttttccgaccgtTAGCgagactttggaaatccaaaaaagggcagcac
ataccgtaccctccatttgcctaagtacccccccccccNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCAGTGTGACTGACTAATCGGGCCGTTTACTTGATGGCTT
TAAACAATCGAAATACTGTCTCAGGTCTTAGATTACTGGGCCATCCTCAT
AAAATATCGACTATCTTTACCTATGTGTATGACCCGGTACTTTTGAACTT
ACCTATGTGTGTCTATCTTTTTTTTACCAGGCCGAATGTTTCGTTATACA
TTTATCAGAGAAACTTTAAATTAAGATATATTCTTATAcactttcttttt
atcttgaaactCTTGATTtcgaaaatgatttttaaaaagatttgttGCTA
TCATAATAATAAGAGAGAATTCTAATCTGATCTTTAGTCTGTAAAGAGTC
AATATAAatatatacgctttttttaataagaatatcatctataagaatat
cagggtgaaaattggccaaatcgtaagaatatcctaagaataccctctag
ggtgaatttcacagaatttgataagaatacagtcattttgtatttggtta
acagaaaaaactgcttcctttgttagagatcaattgaagctttgaggaag
aaatgtaattttaacccaaatgtccactcaaaagttcaaaactctcaaat
taatcatttctcatgtttgtaaaaaagtcaagtctaaaaaagtaagaata
cattaagaatatttcaccctcaattttggcactttcttaagaatacttga
ccctcatcaaaagtacactattcttataaaaaatgcgtagtcttttttga
tgaaatcataAAATTTCTCGCCTTAGTAAGCTTCTTTCTACTATAATCTA
ATACCGAAACTCCCCTCTCAATTATACACTTTATAGATATTCTTTTTGTG
ACAACCTTATCCAAGAAGCTAGGAAGTAAAGATTGATATCAAAAACCAGG
AAAATGTTACTTTTAACAACCGAAATAGGATTCATGTTAAACTCTTGTct
tttgttctgtttttttttgtcccttttttttgaaaagcgtTTATTCCATC
TGGTGGATAAAATTTCAACAACGGAATAAAACTtcgttttgacattttct
ttttcattttttccaaaaaggttGGCCTCTAAAACTTCCTGTTTCTTTCT
TCTTCTCATTCCTTCTTCATTATTGTCAGGAAATAgctgtttaaattttt
gagaTTAAGAATATTAATATATAATAGTTGTAAACTGTTTACTCTTCGAC
GagctaaaaaaacaacaaaggtatgaatttttttccaggtcACTGGTATA
CTGCTGCGGAAAgtctatttttaattttattcaaaaacctTAAACTGCAA
AACTCTTAAAAacactctttttcttttgtaagaacaatGAGGTCAAAAAG
TGCTGAAAGTGAAAGCAGTGAAGATTATAAATATATCTTTTAAAAGATTC
CTTCTACGCGGGGGCTGGACTCCATACCCTTTTTTTCTGGATTAAACCTT
TAGTTTTTCTTCCCACAAAATATTTTCTGCTTTAAAATCCCCTTTCTTTC
AGTAGCAGTTGCACTAAAAATGATCTATTTTCGAAATAGCCGGactaaag
ggggggggggggggggggaaaaaaaattttaaaaaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggggtt
tggaaaacAAATTTTAAGTATATTTTTTATGAGCATCATTGCTTGCCAAT
GTCCTAATTTATATGATAATTTCATATCTTTCGAAAAAGATTGTTTAGAT
ACGTAATATTCTTCATCGTTAGccttttcaaatttgttttgccACCACAT
GGCACTTGTACCCAACAAAATTTTATTCTTCCTCTCGACTAAATGAAGGT
TAATAACCCACAACTTTAAAAGAAGAGTAGAACTGCCACcatccattttt
caaatgatgatttttttttgttatgaaaACATCCCTGAAATAGacgtaaa
gaaaaatattcttcttctttcttgcaaaacaaaaatttcttcatagaaat
tgtttttgttaacAAATTGATGttgtttgtttcaattttctctccctggt
ttttgtattttattatcTTCAGATCTCTCATCTCGTGAttcttatacagg
gtgtccgaaaaaaaatattgagttcgaacatgattctgagtaggtggttg
ttgcgtgtgtttaacaaaatgtaagaaaatatataccaacacaTTAAtag
tttttacaacagtcatcattatgattaaaaagaatttctttttcatgacg
ttaaagttagtgagaattgttttttgtaaaagttgttcataaaagatgtc
tcatgacTATAATATGACACACAGAAAAACTTTGATagacattgcaaatt
tagtgaaacacacacaagaactttctttctatagaagtgttacgactcga
tactttttttccggacaccctgtataactATACGGGTTTGGAAATaatct
tttaaagaaatttgaaacaaaacagaaaaataagTCTACAAAATAAGGGA
AGTTCTACATGCACCAGCAAAATCGAAGTCTTGCTCGCTTTTCTGGGCTT
CTCGAAAGTTTTTATTAATTCTTTGCTGCTAAGAAAGCTGGATCCCAAGC
TTGAATAACGGAAATTTAAGTTTATATTGAGCACAATATCATTCTCAATT
TATTTAGTATGACAATGTTTAGGAATCCATTCTAAAACATTCCACCATTA
GTTTTGGTTAAATCTTAATAATACTATAAGAATCCCCCCATCAGCAGGAG
CACGATATCCTTGTGTAAAGTGTGTATATATGGATACATGTTGTAAGATG
TTTTTCGGAATAAAAATACTTAGCCTGATTTCCTGGAaattgaagataaa
actttcaCAATATTGAAGGGTGTTACTTCCTTCTTTAAAATTTCATCAGA
TGATATCCTAAATGTTTCTATCCTTCCGTTTTCTGAGCTCAAGGTGTGGC
CTACTGATATCATATCCTAGCCTATcctgtcttcaaaaaaattgattagc
tATGTCTAAAATTTCCTTCATTTTTGACAGCTAATCCGCAATTTTGTACT
CCTTACTTCGGAAGTTCACCAGGTTAGCAAGGGNATTCATTTTTGACAGC
TTATCCGCAATTTTGTACTCCTTACTTCGGAAGTTCACCAGGTTAGCAAG
GGGACTTGTATATCTaagccaaaaataaaaatgacgttTCTGGCACCCTT
GCAGGTTTGGTCTAAATTTATTTAAATCTTAACCCTTTGAGGGAAAGgaa
atcttcaatttttgtgatttttaagcCACTTCTCAGAGGGTAGACTTTTT
TTTTGTAGCacttttagaaagattttcgaGTTGTGATGTATGCATGTAAT
AGGTTATTTCATATAGATGAACAATTAAAATATAGAATAAATGAACAATT
TAAATTTAGCAAgatgaaaaggtacccttatcgCTCTCACATACCTGGGT
TTTTAACTAAGACGTTCTACTGACAAATAAAAACTGAATTTCAAACCTTG
AAAAATTCtaacttcaaaaaatttcaacttctCCCAACTTGTGCCTACTA
CGGATTGCTATTATTATATTGGGTGACTTACTTACACATTTGAAATACAA
TATACTCTCAATACCATTACAAGCGGAAGATTGATCTTTATCCTTCATTT
TTCTCTTATTGAAGAACAAATAACTTTATAAATTAAGATGGGCGAAACAC
AAAGAGGCAGAGAGGATATACATTTTTATCTCTGcagatttaaagttttt
ttcgagCTCTCTGCGAGCTCAGAAAATTACGCAACGAGTCTCCATTatac
aaaaagaaaatctaaaaaaatcacCGTAAGAATAGAGCAAAAATGGTAAC
GGTTTCACACCGTTAACTCTACCGAAACAACACTGTGTTTTTCGCCGTTT
TTTTTCACGTGCCTTGTAATCAAAACAACCCAACTGCATCAATATTCAGC
ATCAGCTTTAGAATGCTCCCAAAGAAACCAAtgttattaaatttgattcg
ctataaaaatattaattgctCAGGATTGTAATTTTTGTATTATTCTTTTT
ATAACAAGAACATTGTATGATTTTCATCACATAAGCCTCGACTACTCAAA
GAAgagagaattttcattttttcttatggataaaaaatattgaaacagtt
aaaacaaaaataaaattatctGGAATTTAAGTATTATATTCTAGAGCTAG
GTTAATTATCTTAGTCTTCGATATGAAGATTTTCTTAAGACTAAACAGTT
TCTTGGTATGTGATTTTGAGGTTTTACAAATTACCTTTTATTGCAAACCA
AAAGTAAATTATTTCGGCTGCTAACGACTCTTTGACATgatttgaatatg
ttttaaaaaGAGATTGTGCTGGGTTGTTAGGCATCTCATTATACATtgtc
ggccctttttacgctaGTCCTTATTGACCGCTAACCTTTTGtaatctttt
ctcttttttactcGTTCTAGGAGGGTGGTAGTCAGAGTGATTCGGCAAGC
CAAGCATCCACCACCAGGAACAACATGTTGCCATCATCAAAGTACACATC
CTCAACGTCTCCAAAGATACCAACATCTTCGGCAATATCACCAGAACTTC
TTTTTAATCACCACAAAACCTTTACACAGATGCTACCCCGGATTCCCCGG
CCATCACCAGAACCTATTGAAAGCGCACCAAAGGTTCTCAACGCCTACGT
ACCAACAGAGACGTCACCTAATGATTTTGAGGATCTTAAGGGCTGCTACT
AAAATCAGATATATTTTTCTCGGTGCTGCCGGTACAGCTGGAGTTGGAGC
GAAGCTGGTATtgatttatttacttatttctatatgatattttttttcta
attcgtATGGTAGTCTCAATTTAATCTCTATAGAATTGAGCTATAtgtct
tttgattttctttaaaagtgcCAATCTAATGccaatttttaactttttaa
tatttaaagcCTAGATCTAAAGTTAACATTTTTGAATAGAGGATATTTAA
GATGATATGTAAACAATAGCGTGCTGAAGAAAtcaaatcactttcatttt
gtAATTCGTATAACGAACTCTTATCAGGATGATACAGATTTCGAAACCTC
ACTCTTTCCAAACCTGAAAACCAGCCCGCAGGAAAAATAAAACTATATTT
CTTTGTACAATACAATcagtaatttttctttcctaTTATTACACCTCTTC
TTACGGACctggtagaatttttttcagccagagggggtaaaaataacaga
ctgaaacttgatggggattgatattccaatattttttatggctgggaatt
taaattcaagtcagaaaattcagtggagatgggaaaaatagtaaaatatt
ttgcagtgaggattggtttatttggttAATTTCAGGGGGGACAGAGATTG
GCGTATAGCTTTCCACTGGGgatgtagactggagtcgtttataatgcgtg
taatactaataatagcagacattgtggtgtgccgTGACACTCAGGAGGTT
CTTCACCTGCgaggacatccgttctcccgtgtagttcgagtgtcgtggta
tacaccatggctcggcagctcgcatctgcagggttgcaatgtctgcttgc
gctgtgattcctactccaccgtgggtaggacccattccgatgcatcggag
ggcatatctatctatctatctactAATAATagcaatactaataataataa
tacgggatttagtttgtataaacgactggaagaatccggtgttccagcct
tatagataaaagggctagctacgcagaaacttgcgtagcgagaaaacaat
ttatcaagcaacaacaaactctcaaatcgaaatcaactcaaatgaaaaac
tttcaatacacaaatccacacatattttttttctcaagaattattttgag
caggaaaaaattataattacaatattgacacttttcttttgtttggagtt
agtcagtgcacaaaggtttctagacgactaaaattgttccattcattact
ttttgctttatttctactatgtataaacatggtataaattagtcgtctgg
CTTGCTAGACTACTGGGGATGATGTTCTTGCGAATTTTCCCAGCGGGAag
gggttccagtgggtctttgagaagggggtgtattattcctatctctacaG
AATGGTGACGGTATTAGATAGGGATGTCAACATTTGACCGACTTACGGTA
TCTCTTTAAAATCAAGTACCGGTGCTTACTCGATTGCAAGTATGTATTCA
ATCATCTCAATTCTACTTTCTTTGTAGACATATAACAAATGGCGTGACAA
ATGGTTAGAACTACAGGAACAAGTACCACAACTCGGCTGGATCTCTCAAT
ATTACCCTAACGAGTTCATTGATGAGCTAcagcaaaatttcaataaaGGT
AGATGTTCTTTTCGTTTGTAAACAAAGCCTAAAATCATACCCAGACATTT
TCTAACAAATTACCGACACTGTAGAATATTTAGAGCATTGAACTTAGCCA
AGCAGACGGATTAATTAAGTATAGGCCTGAAAAGCTAGTATATCATTTTC
TATNTAGCCAAGCAGACAGATTAATTAAGTATAGGCCTGAAAAGCTAGTA
TATCATTTTCTATCTAAGACTCAACACAAGTTATTTTCTACCTAACTTGA
CTACGAATCCTTGTggttttcaacattttaaaatCTACTTTAAAAATGTA
CAAACATGGTCGCATAAGTGACGGTGTTCTAGGTTCAGATCTACCGCCCG
GATCTACTGGTGAAGAACAGTTCAAACCGGGTGATTGATATAATGTAAAC
GGGGTTAAAATTCGTCAAAGTGGCATAAGTAAAGGTGTTTTAGGTCCAGA
TCTACCGGTACAGAATCGTACAAACCGGGCGGTATAATTTAATGCCAGTG
GCAATCTATGGGTCAATACTTGTCAATAATCCACAGTATGATAATCATCC
ACCAATGACTACTATTTTCCACCAAGTACAGATGCTAAAAGAACCCCTTT
AAAACCAACATTATATTTGCGAGTAATTTTATATTGATGTAGTCTATTAT
AACTAGCACCTAACTCTGTTATTAAAACGTTTTAACATGTTTTTGTACTG
ACGAAATTTTAGacgaaaaaaaaagtaaaacagaTTGTCTCCTTTACTCT
ATTAATGGGGACGTCTGATCGGATGAAGCACTAAAATGACGTCTGAAAGG
TTGATTTTTATTGAAGCCAGATGGGATAATAAACTATTTGTTAATATTTA
GGTGTTGGTTTTCATGTGCTAGTAGAAAATCGTTGTCAAAATCCAGACAT
TATTAGATTCCGCCCATATTCAACTTTTACAAAAGAAACGAGTAATTTCA
AACCGTTTAGAATTTTTTAGTACGCAATTAGTTATCTTATCGATTACTAC
GATATATCGATGTCGAATCGATCTCGGTCGcttttaaacaaaaatcgtaC
GATAATAATGTCAACCAATTGAACATAATCGATAATATTCGAATGCGATA
GGCCTtctcataaattattttgagtacTACGTGATTAAATCTCTTGAGAA
CAAGTAGACTTGTTCTAAACTCCTTCGCGAATCGATCActatagcaatat
tttgaaaaggtAAGAGTTGTTTGTGCcctaatttatgaaaaggtctattt
ttttACCTCGATAAAAGCTACCGGttatcgattttaatcgatatCTTATC
CATCAAATAATGATCAATTTCATCGATCTGGTAATTTTAAGTTGGCTTAT
AACTTGGTCATTAATGTTCGTGTGGGCCCGGTccgatgatatcggagggt
cAGCTTTTCTCTCTCTTCTCTAATAAATCATGCCTTCTCGTTTTATTACA
GGCAACGAACAAATGTTGGAAGGTTTAGAAGCCATGAAAAAGCTGTTCTT
TGGCGTCGCAGGAGATGTTGCAGAAACAGGTGAATtcatgaaattatttt
tcattcataacaCCAGTTATACGAAAACACATAAAGTAATAGCACAATGT
CTCTTAAGTGAGTGAATTTAGCAAAAACCGTTTCTTTTAGGGTAACTTTT
TTACCGTTGTTGTGTCTTCAAGAGTTGCTCAAAATCTTGTTTTCACTTTA
GTTTCTCTAAATGTCAGTTTCATACAGCAGGTTGTTGCATATCTGAAATT
CCTGTTTACTTGGGGGTATGGTCTTTGGGCAGTTTTGAATGCCACTCACT
CCTTACTCTTTCAACCACGCACATGCACAATTGTACACGCGTTaagtttt
tttcgttttcttatttttatttcctttttttctttggtGCACCTTTTTGT
GTTTCTCTATCCTTGAAAACACATCGAAACACCAACTATTCATCATAGAA
GTGCAACCACCTATCGTTAACGCTAGTTTCTTCACGTCAAACGAAGCGGA
CGATCAAGAAGGGAAAGCCAGTGCTGGTGCAGGCGATGACGACGATTCTG
ATCTACTGACTTCTGAAGAACAAAAGGTCTGACTTGTTTTCTCTTCGAAT
GTTAattaaaattaatcaaatttattgatatAGACGTccctttagaaaaa
aatccttGCTGTATTTCGAACTCGAACAGGgaatcttattttttcaaatt
gtagTGATATTCGAGctaaagaaatttttaagagggtttctccttgatgg
GGACTGGCAATTAATTCGAATAAATGAAGTTCGATTAAACGAGAGTCTAc
aatatttctaaaaattcaGATCCCGTATTTGTCAACCAGGAATAAAAACA
CGATAGACTAGTAGGCATGCTTTCGTACTTAGAGATGAATAAGACAAATC
GTTAAAAAGAAGtgttacttttttctttagcttcGTGAACTTTTAACGAG
AGCGCAACAAGAACTGCTCGAGATGCAGGTAAGAATCAGCTTTGACAGAA
TGAAATTAATCTCATAGCAGATCATCCATTCCGCGCATACtacgctctgc
tctaaagggatatggCGATTATAACGATGTGACCTGGTCGTTCAGGCAAA
ATAATTCTTATCCCAAATCTGGGTCTCTCAAAGTGGTCTGTAAACCAGGA
TGATTTTCTTATGGAGTTATAGCCTTTAAAGTACATACGAGCCAACGTGA
TGTAATCAGAATCTCGTCGGAGATTAGAATGAAGTATATTCGATATTACC
CAACAAATGGTTTGATGCCTCGCACTTTATCTATGTTATCTTTTGATCAC
AAAAATGTGCCAAATACCTTTCAGTGATAAAGCGTTTAAAATGGGTGTTT
TGTAATTCcaggaaaattttatttttgtcttaTCGCATtggttttctttt
ataaattaTTCCAAGAAATAGAGTATCCCCGAGAACGTCTTCTTTCCTGT
TATGGGTAGAAATTTTATTCATCCATTTCGTTGGGTCCGTTCACACCTCA
CTCGAGCCAcaattttcaaccaaaaatttcTGAAACTCACCCAGGGGAGG
GgagggaaattttcaaaaatcgaagaaaatttttcaaaaaagtctcctTC
TGAAAGCAAAAATCAGGCTCTAAGGGTCGAGCTATccacacatacccctc
atccgccaaccctagtacccctcccccggGCATGTTGTTCCCTCGATGAA
AAGATCACGTttgtaccccctccccccaataTGTCCTTTTTGTCCTACCT
CATTTTATATCCAAAGAGAAAATGCAGAAAATAAGAAGTTCGGATAAACT
TTGATCGGCgatgaaaaatcggggaaatttacGTCGTCTTCGTGAAAAGG
ATTGGTACAGCACTCATGCGAAAAGATCGTTTTAGCAGGTATCGCGCCTC
AAAGACCTGTGTCACTTTTCATTATAGCATTACAAAAGGTAAAATAGTTG
AACAAGTCTATAGCATTAGCAAGGCTTATTGTGAGGAATGGGACTACTAT
AGATCACCCTTTTGCCCTCTCATTTGGTGGAACATTAATTTCCCTAGAAA
CTTTGATATAACCAATCAAAAAACTTAATACTGTATTGTCTATTAACTAT
AATTTCTTTAATTCACAGCATAAATTTCAAAAGGAGCTTGATAAGCTGGA
GCACGAAAATCGTGAAttgagaaaagaaattttgatggATAAAAGTAAAG
GCCATACACATCATAGGAAAGTGAAGGTAATTTTAAATCTCTGTTTTTTG
ACGTCAGAGTGCAAGTAATTAAAGTTGTCATGCCCATTATTTTGGGGCGT
GAAATAGTTTTATGCGCCGTGATAAATGCATAGTGGCGTCAAATCTTTAT
GATGAAATTTTGGCCGTAACCACACTGGCGATATTACCGATGTATGTGTG
TTTTACTGCGACGGAGGCGGTAAGGTCCTTATTTGGCCaaatcctgacca
gctgagaaCGACggaaaatcagcacttttaccgtcctcgattttgcgggg
cagaactgcgggttattccaaatcgcttcagtcactttaccgttgtcatt
gccctcttttgacgtcaatgcaagtcttctttcaatcttttccaagcaaa
gattttaactgccaactttgtgccTACTTtgtgcctactctaacaattag
aataggcagggcagaaagtcagctgtctaaactagagcttatttACGCAA
CCGGTATTGACTTTTTTGATTTCAGAAAACAGTAATTGACATGTATTCAG
ATGTGTTGGACCTTCTTTCGGAATATGACAACAATTATGATATCCAAGAC
CATTTACCAAGGGTGAGTTATTTATATTTATAGCTAATTTCAGAGTAAGC
CCGTTTTTGTCTGAAAATACCATAAGATAACTCTATGAGTAAACATCTTT
TCACAAATAGTGTCCCTGTACTTAGAAATGCTTACCCTCTNGATTACAAA
AGGTAAAATAGTTGAACAAGTCTATAGCATTAGCAAGGCTTATTGTGAGG
AATGGGACTACTATAGATCACCCTTTTGCCCTCTCATTTGGTGGAACATT
AATTTCCCTAGAAACTTTGATATAACCAATCAAAAAACTTAATACTGTAT
TGTCTATTAACTATAATTTCTTTAATTCACAGCATAAATTTCAAAAGGAG
CTTGATAAGCTGGAGCACGAAAATCGTGAAttgagaaaagaaattttgat
ggATAAAAGTAAAGGCCATACACATCATAGGAAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037393XLOC_037393Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059388-exon-scaffold_327-1491911889:27920..28006TCONS_00059388-exon-scaffold_327-1491911889:27920..28006Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:27920..28006TCONS_00059388-exon-scaffold_327-1510915933:27920..28006Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:27920..28006TCONS_00059388-exon-scaffold_327-1575043694:27920..28006Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:28962..28989TCONS_00059388-exon-scaffold_327-1491911889:28962..28989Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:28962..28989TCONS_00059388-exon-scaffold_327-1510915933:28962..28989Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:28962..28989TCONS_00059388-exon-scaffold_327-1575043694:28962..28989Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:37890..38226TCONS_00059388-exon-scaffold_327-1491911889:37890..38226Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:37890..38226TCONS_00059388-exon-scaffold_327-1510915933:37890..38226Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:37890..38226TCONS_00059388-exon-scaffold_327-1575043694:37890..38226Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:39697..39817TCONS_00059388-exon-scaffold_327-1491911889:39697..39817Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:39697..39817TCONS_00059388-exon-scaffold_327-1510915933:39697..39817Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:39697..39817TCONS_00059388-exon-scaffold_327-1575043694:39697..39817Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:41271..41348TCONS_00059388-exon-scaffold_327-1491911889:41271..41348Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:41271..41348TCONS_00059388-exon-scaffold_327-1510915933:41271..41348Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:41271..41348TCONS_00059388-exon-scaffold_327-1575043694:41271..41348Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:41768..41895TCONS_00059388-exon-scaffold_327-1491911889:41768..41895Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:41768..41895TCONS_00059388-exon-scaffold_327-1510915933:41768..41895Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:41768..41895TCONS_00059388-exon-scaffold_327-1575043694:41768..41895Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:42250..42297TCONS_00059388-exon-scaffold_327-1491911889:42250..42297Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:42250..42297TCONS_00059388-exon-scaffold_327-1510915933:42250..42297Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:42250..42297TCONS_00059388-exon-scaffold_327-1575043694:42250..42297Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1491911889:44452..44556TCONS_00059388-exon-scaffold_327-1491911889:44452..44556Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1510915933:44452..44556TCONS_00059388-exon-scaffold_327-1510915933:44452..44556Clytia hemisphaericaexon
TCONS_00059388-exon-scaffold_327-1575043694:44452..44556TCONS_00059388-exon-scaffold_327-1575043694:44452..44556Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:27920..44556 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.408994	0	0	2.56354	0	0	0	0	2.90695	0	1.78241	0.529687	0	1.42645e-05	2.52624	2.14714	2.20427	0.367288	0.00560468	0	0	0	0	4.89541	2.2851	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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