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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059377 ID=TCONS_00059377|Name=TCONS_00059377|organism=Clytia hemisphaerica|type=transcript|length=1403bp
GTTCTTTAAGGTAAACTTTAAAAGTAGTGTAGtagctttcaaaaaatgat
aaaatgtacATAACATCacaattctttgaaaaaatatctttaaaaatgtG
GCACACttcattttgtcaaaaataatcattagttttgacttcaaaatcaC
AATAGCCCGGAAAACAAATTTAtactgcaataaaaatgctttaaaaaacc
TGAATCTCTATAAttcatttaaaaatgttttatgagcatataatcttttt
caaattcatgGAAGGTCTGTCCTCTCTacttcaacattcattcaataTGT
ATTGTTTTAAGTATTCACACCCAATACACCACCAACCCCTGTTTGCTTTT
TGAAAACTGCGTTTCCAATCAAAATATCCCAAACATTACGACAATGATGG
GAATTGGATAAGAACTTTGTATATTCTTTATCATAACCTATGCTTGACCA
TTTTTTCTGAATTACATTCCCaagtttttgccattttccatcttttgcta
aaattttcatttcttcccACATTTGTAAAGCATCTTGATCAGATTTATTT
TGCATATAAGGTACGAGCCACTCCAGTAGTGTTTCTTTTTGTTGGCGCTT
TTTACTGATATTATGAATACTTCCACCTGATATAGTAGATTTCTCTGTAC
CTTCATTCACCTCAGTGCTTTGACTTGTTGAGGTAGAACTATCAGAATTT
AGCGTATTACTACTTGATGACCCACTGTTTGTGCTATTTCCAGTACTATT
CAAAAGCTCCCATATGTTTCTACAATGCGCTGAGTTATCTAAACAAGTGG
TGAATTCTTGTAATTTTCCAGTATTTAACCACTTCTTTCTTATGACGTTT
CCAAACTGTGcccattgttttgattctgcATGAATAGTGAGTTGTTCCCA
AATGCCACTTGCATCTGTATCAGCTTTTGATTCTAGGTATGGCTTCAACC
ATTTCATAATCTCATTTTTTCGGTTACGTTGAAGTTGTTTTTTAGATACA
GAAGATAAAGAGATATTCTTCCCTTTATTGAGCTGTTTATGTTTCATTCT
TACTCTTCTTGTGAAAGTATAATTTTTGAGCTTTATTATAATTGTAAAAG
ATCCATGTGGGATTTAGCCACTTAGTTGTAATCAGCTTGGAAGAAGATTG
GGTAGTGAAATTGATGATTTTCACAATTGAATTCAATAGGAATGACTTTA
GAATCATTGTGAAATTCTGGAGCAAAGTTGGAAATTTTATCACAACAATG
ATTGCTCAATGGCatcttatttttacaaaaacagAATTTAGAACTGTAAA
ATGACATCTATTGTGCCCATTATTTTTTGGGAGTTAAGAAGTTATTCCAA
TAACATCAGTTCTTTGGTAATAAAAAGTTCTACCAGGTTATGCTACCTct
cag Run BLAST on NCBI protein sequence of TCONS_00059377-protein >TCONS_00059377-protein ID=TCONS_00059377-protein|Name=TCONS_00059377-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
MKHKQLNKGKNISLSSVSKKQLQRNRKNEIMKWLKPYLESKADTDASGIW
EQLTIHAESKQWAQFGNVIRKKWLNTGKLQEFTTCLDNSAHCRNIWELLN
STGNSTNSGSSSSNTLNSDSSTSTSQSTEVNEGTEKSTISGGSIHNISKK
RQQKETLLEWLVPYMQNKSDQDALQMWEEMKILAKDGKWQKLGNVIQKKW
SSIGYDKEYTKFLSNSHHCRNVWDILIGNAVFKKQTGVGGVLGVNT Run BLAST on NCBI transcript from alignment at scaffold_326:284536..285938 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059377 ID=TCONS_00059377|Name=TCONS_00059377|organism=Clytia hemisphaerica|type=transcript|length=1403bp|location=Sequence derived from alignment at scaffold_326:284536..285938 (Clytia hemisphaerica)
ctgagAGGTAGCATAACCTGGTAGAACTTTTTATTACCAAAGAACTGATG
TTATTGGAATAACTTCTTAACTCCCAAAAAATAATGGGCACAATAGATGT
CATTTTACAGTTCTAAATTctgtttttgtaaaaataagatGCCATTGAGC
AATCATTGTTGTGATAAAATTTCCAACTTTGCTCCAGAATTTCACAATGA
TTCTAAAGTCATTCCTATTGAATTCAATTGTGAAAATCATCAATTTCACT
ACCCAATCTTCTTCCAAGCTGATTACAACTAAGTGGCTAAATCCCACATG
GATCTTTTACAATTATAATAAAGCTCAAAAATTATACTTTCACAAGAAGA
GTAAGAATGAAACATAAACAGCTCAATAAAGGGAAGAATATCTCTTTATC
TTCTGTATCTAAAAAACAACTTCAACGTAACCGAAAAAATGAGATTATGA
AATGGTTGAAGCCATACCTAGAATCAAAAGCTGATACAGATGCAAGTGGC
ATTTGGGAACAACTCACTATTCATgcagaatcaaaacaatgggCACAGTT
TGGAAACGTCATAAGAAAGAAGTGGTTAAATACTGGAAAATTACAAGAAT
TCACCACTTGTTTAGATAACTCAGCGCATTGTAGAAACATATGGGAGCTT
TTGAATAGTACTGGAAATAGCACAAACAGTGGGTCATCAAGTAGTAATAC
GCTAAATTCTGATAGTTCTACCTCAACAAGTCAAAGCACTGAGGTGAATG
AAGGTACAGAGAAATCTACTATATCAGGTGGAAGTATTCATAATATCAGT
AAAAAGCGCCAACAAAAAGAAACACTACTGGAGTGGCTCGTACCTTATAT
GCAAAATAAATCTGATCAAGATGCTTTACAAATGTgggaagaaatgaaaa
ttttagcaaaagatggaaaatggcaaaaacttGGGAATGTAATTCAGAAA
AAATGGTCAAGCATAGGTTATGATAAAGAATATACAAAGTTCTTATCCAA
TTCCCATCATTGTCGTAATGTTTGGGATATTTTGATTGGAAACGCAGTTT
TCAAAAAGCAAACAGGGGTTGGTGGTGTATTGGGTGTGAATACTTAAAAC
AATACAtattgaatgaatgttgaagtAGAGAGGACAGACCTTCcatgaat
ttgaaaaagattatatgctcataaaacatttttaaatgaaTTATAGAGAT
TCAggttttttaaagcatttttattgcagtaTAAATTTGTTTTCCGGGCT
ATTGtgattttgaagtcaaaactaatgattatttttgacaaaatgaaGTG
TGCCacatttttaaagatattttttcaaagaattgtGATGTTATgtacat
tttatcattttttgaaagctaCTACACTACTTTTAAAGTTTACCTTAAAG
AAC Coding sequence (CDS) from alignment at scaffold_326:284536..285938 >TCONS_00059377 ID=TCONS_00059377|Name=TCONS_00059377|organism=Clytia hemisphaerica|type=CDS|length=741bp|location=Sequence derived from alignment at scaffold_326:284536..285938 (Clytia hemisphaerica)
ATGAAACATAAACAGCTCAATAAAGGGAAGAATATCTCTTTATCTTCTGT
ATCTAAAAAACAACTTCAACGTAACCGAAAAAATGAGATTATGAAATGGT
TGAAGCCATACCTAGAATCAAAAGCTGATACAGATGCAAGTGGCATTTGG
GAACAACTCACTATTCATgcagaatcaaaacaatgggCACAGTTTGGAAA
CGTCATAAGAAAGAAGTGGTTAAATACTGGAAAATTACAAGAATTCACCA
CTTGTTTAGATAACTCAGCGCATTGTAGAAACATATGGGAGCTTTTGAAT
AGTACTGGAAATAGCACAAACAGTGGGTCATCAAGTAGTAATACGCTAAA
TTCTGATAGTTCTACCTCAACAAGTCAAAGCACTGAGGTGAATGAAGGTA
CAGAGAAATCTACTATATCAGGTGGAAGTATTCATAATATCAGTAAAAAG
CGCCAACAAAAAGAAACACTACTGGAGTGGCTCGTACCTTATATGCAAAA
TAAATCTGATCAAGATGCTTTACAAATGTgggaagaaatgaaaattttag
caaaagatggaaaatggcaaaaacttGGGAATGTAATTCAGAAAAAATGG
TCAAGCATAGGTTATGATAAAGAATATACAAAGTTCTTATCCAATTCCCA
TCATTGTCGTAATGTTTGGGATATTTTGATTGGAAACGCAGTTTTCAAAA
AGCAAACAGGGGTTGGTGGTGTATTGGGTGTGAATACTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059377-exon-scaffold_326-1491911889:284536..285938 | TCONS_00059377-exon-scaffold_326-1491911889:284536..285938 | Clytia hemisphaerica | exon |
| TCONS_00059377-exon-scaffold_326-1510915933:284536..285938 | TCONS_00059377-exon-scaffold_326-1510915933:284536..285938 | Clytia hemisphaerica | exon |
| TCONS_00059377-exon-scaffold_326-1575043694:284536..285938 | TCONS_00059377-exon-scaffold_326-1575043694:284536..285938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:284536..285938 . |
Blast
The following BLAST results are available for this feature:
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