TCONS_00059299 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059299
Unique NameTCONS_00059299
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059299 ID=TCONS_00059299|Name=TCONS_00059299|organism=Clytia hemisphaerica|type=transcript|length=125bp
agaacatcaaaattagaaataatgACAGAAAAAGCAGATCAAATCATGTC
TGGTTTCAAACTTAACTGGATGAATTTACGAGATGGTGAGACTGGGAAAA
TAATGTGGCAAGGCAATGAAGACTT
Run BLAST on NCBI

transcript from alignment at scaffold_325:26796..29352+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059299 ID=TCONS_00059299|Name=TCONS_00059299|organism=Clytia hemisphaerica|type=transcript|length=2557bp|location=Sequence derived from alignment at scaffold_325:26796..29352+ (Clytia hemisphaerica)
agaacatcaaaattagaaataatgACAGAAAAAGCAGATCAAATCATGTC
TGGTTTCAAACTGTATCCTTTCAAATTGATTATAGATTATTCTGTGTTTA
TTTTAAGTTTAGGCTAAGCAGATAAGATTCCCAATAGTTCAGAAGCTAGA
TTAGTGTAAGTAATCGTTTAACTTTATggtagtcggttattacttataac
cttataataaaactgtcaatcaaataatgtaaacactaattaaatatacA
GCGCACgtaagagaaaaggaaaataaccgactagcctggttaaccaagcc
agtttttacaagGCCAAGATACGGCTGAAGACAATATAGCGTTATCGgtg
ctttaatgatttttatgatgtacggaattttaagtttgccttgaaaaact
ATTATTTAGATATATATATAGATAAAAcagatattcagtcacaacttacc
atccgATTTTactaagtgactgaatcaatctggcttagatttctaggcta
ataaccgactagaagctacttccaacgcctttttttcttcacctaaaatc
gtaaggagagacatacagatttctgtatgtctgacccgtgcgggattgca
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CACAAAGTAAATGTTTTTCATAATATAATCTCGCAATTTCCTCTCAATAT
CTAAAGAAAACTGTTCCCTACTGTACTGTATGCTGTTCCATGcccgaaaa
tttttaatttgtttcttTTCCTTGACAATTTGGTTTCTACGCAGTAACTG
GATGAATTTACGAGATGGTGAGACTGGGAAAATAATGTGGCAAGGCAATG
AAGACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037343XLOC_037343Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059299-exon-scaffold_325-1491911889:26796..26857TCONS_00059299-exon-scaffold_325-1491911889:26796..26857Clytia hemisphaericaexon
TCONS_00059299-exon-scaffold_325-1510915933:26796..26857TCONS_00059299-exon-scaffold_325-1510915933:26796..26857Clytia hemisphaericaexon
TCONS_00059299-exon-scaffold_325-1575043694:26796..26857TCONS_00059299-exon-scaffold_325-1575043694:26796..26857Clytia hemisphaericaexon
TCONS_00059299-exon-scaffold_325-1491911889:29290..29352TCONS_00059299-exon-scaffold_325-1491911889:29290..29352Clytia hemisphaericaexon
TCONS_00059299-exon-scaffold_325-1510915933:29290..29352TCONS_00059299-exon-scaffold_325-1510915933:29290..29352Clytia hemisphaericaexon
TCONS_00059299-exon-scaffold_325-1575043694:29290..29352TCONS_00059299-exon-scaffold_325-1575043694:29290..29352Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_325supercontigscaffold_325:26796..29352 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059299 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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