TCONS_00059164 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059164
Unique Name	TCONS_00059164
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	959

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_319:83078..98541+
coding sequence from alignment at scaffold_319:83078..98541+

transcript sequence

>TCONS_00059164 ID=TCONS_00059164|Name=TCONS_00059164|organism=Clytia hemisphaerica|type=transcript|length=959bp
TGAAATCACACATCACACGGCACACACTTCCACTGTATGATATTATGAAT
CCGTAATACTATGTAATACGCCTTCTATTATATACTACTGCATTAGCCGA
CTGAACATTTCAGTCGAACTTGAAAGGGTTGTCTGGTTGTGTAGCTTTTT
TTGTCAGACAGAAAGCAACTTCAATCCTTCAATCATGTCAGGATTACCAC
CAGGATGGATAGAAAAGACATCAAATTCAACAGGAAAGAAATATTATTAC
AACACACAAACTCAACAGAGTCAATGGGAAAAACCAACAGATGATGATGT
CAAATCTGTGAGAGCATCACATCTTCTTGTGAAACACAACGAATCAAGAA
GACCAGCTTCCTGGCGACAAGATAAAATCACCAGGTCTAAAGATGAAGCT
TATGAAATAATTGCAGgtTATCGAAAAAGAATTACGTCTGGAGAGATTTC
ACTTGAAGATTTAGCCCAAACAGAAAGTGATTGCAGTAGTGCTAAAAAAG
GAGGGGATCTTGGATTCTTTTACCCTGGTCAGATGCAAAAACCATTTGAA
GATGCAACATTCGCTTTGGAGGTCGGAGAATTAAGTGAAGCCATCTCAAC
CGATTCTGGTATTCATCTTATACTACGTACAGGCTGATTGAGTCAcaact
tgtttttaatttgacattttgtttttatttcttgttgcttttttttgcat
agatatctctttatattttttttttgtagtcATTTACgtaggattttttt
atttatcaatcatttttatgATGGAAACAATACAAAAAGGGTCTAAATAA
AACAAGATGTATCTTTTCCTGGAAATCCTTTTTATATTTGCTAATTTCAT
TATAATACCGATAGAGAGTGGTGATATTGATTTTTGGTTTATTTGAGTTT
ACATAGTTAAGGTACATAGTTAAGGGGGTGACACCTTCCGAAAAAACGAA
GAAGGAGga

Run BLAST on NCBI

protein sequence of TCONS_00059164-protein

>TCONS_00059164-protein ID=TCONS_00059164-protein|Name=TCONS_00059164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MSGLPPGWIEKTSNSTGKKYYYNTQTQQSQWEKPTDDDVKSVRASHLLVK
HNESRRPASWRQDKITRSKDEAYEIIAGYRKRITSGEISLEDLAQTESDC
SSAKKGGDLGFFYPGQMQKPFEDATFALEVGELSEAISTDSGIHLILRTG

Run BLAST on NCBI

transcript from alignment at scaffold_319:83078..98541+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059164 ID=TCONS_00059164|Name=TCONS_00059164|organism=Clytia hemisphaerica|type=transcript|length=15464bp|location=Sequence derived from alignment at scaffold_319:83078..98541+ (Clytia hemisphaerica)
TGAAATCACACATCACACGGCACACACTTCCACTGTATGATATTATGAAT
CCGTAATACTATGTAATACGCCTTCTATTATATACTACTGCATTAGCCGA
CTGAACATTTCAGTCGAACTTGAAAGGGTTGTCTGGTTGTGTAGCTTTTT
TTGTCAGACAGAAAGCAACTTCAATCCTTCAATCATGTCAGGATTACCAC
CAGGATGGATAGAAAAGACATCAAATTCAACAGGAAAGAAATATTATTAC
AACACACAAACTCAACAGAGTCAATGGGAAAAACCAACAGATGATGATGT
CAAATCTGTGAGAGCATCACATCTTCTTGTGAAACACAACGAATCAAGAA
GACCAGCTTCCTGGCGACAAGATAAAATCACCAGGTCTAAAGATGAAGCT
TATGAAATAATTGCAGGTAATCAactgtttttgttttacttgctcTAGTT
TGAATATTCTCTCATAGATTTttttcagaagactctccaaacaggaccct
gccgacacaccggactgtccggtgtttcgtccggtggcaaaaagtatcct
ttcgctgcACCGGACGCAAttagtccggtgtcagtccggtgttgcataca
gggaattttggacgccggacgtttatgaaacaaaaaattaagaaacaccg
gacgcaccggactggtcatgtccgatgttttgattgtccggtgggaaaaa
tatccttctccgacaccggacatctgacttccttaagtctggtgcagaaa
ttgtccggtggtaaaaaaaattctcattttacaccggactttcacgtgtc
cggtgttcgttaagtccggtgcgtcggcagggtcctctcCAAACCTGAGC
AAAActgagtttgttatttttcgttCCCCTTGGAGACAGATGGACTGTAT
TCCAAGAATTAAGCTTTGCGGGAAAATTCTATCACCAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTTTGAATC
ACTGGTATGTAAATGAAAGCCAGTATATttctataataaaaaaagttagT
GAGAAGTGTCTGGAAAACACAAGGAATAAGCACTATATCCCCATTCTGTC
ATCTTTATTTGGGTAGAGACTGTATAGATTCCTTGAGCTTTTATATCGGT
GAGAACGAACGATCTGAAGAATATACAATCTCACAATCCTAAGTTCAGTG
TATTGTCGCGAAGAGACTGGTAACGGGCGAAATGACGGCATTGTAAAATA
GAGGTCGAAAGATTGggttgcatttaaaaaaattagttttaaacaTTCCG
GTGCGTAACAAGATTTTTGTTACAGAATTTTCCACGAGAGGCAATTTTCC
TCAACNGACTGGTAACGGGCGAAATGACGGCATTGTAAAATAGAGGTCGA
AAGATTGggttgcatttaaaaaaattagttttaaacaTTCCGGTGCGTAA
CAAGATTTTTGTTACAGAATTTTCCACGAGAGGCAATTTTCCTCAATTTT
CAAAGGCTATCAGAGGTACTGTGCCCGCaagaaaattatgaccagcTGAG
TTATCAAGGTTAATtgaataaagtttaaaaaatacatgtgaatactttaa
tgggattaactttcgcggggattaactttcgcggatttgggtgtcatccg
cgaaaatccacgaaattaagtcccaatggaaatttggaagggcctaaTCC
GCAAAATGTTTCTaaataaaactcaaaatatgtcaaacaattactatttg
aatgtttactggcatcaaagaagcgctaataatgtgtatttcaacaacca
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NNNNNNNNNNNNNNNNNNNGGAACCGCCTGGTATACCTTGAAAtcgagta
acttgcatcagtggaggctaacatgcatacccctcaaatgaatgacccat
taaaatacaaagttaaatcaaaacaaaatggtagagtagtagagctgcgt
agttcatttgttttggaattttgctgctttgattggtcagtcatttaatg
gctatgcaagtttccctccaccaATGCAAGTTGCCCGACTTCACTGTACA
TTTCTGCAGAAAGAATCAACACTGTATGAGAGATACGAGATTCCTACTCT
GAAGTTTTAGTCTGAGAGAGCATTGATCAAACTTACTCCAGCTcaatatt
tatgaaaaaatttggCTGGAATAAAAGTTAGATTATACCAAGTTTAATTA
TCTGAAATAACCCTTCTGACTGAAACATCTTTGTAAAATCTACACCTCAA
AACACAATTATATGTCACATCTTACAGGAGTACAGGAAACCATCAACCCA
GCCCAGCGCACAGCACATAGGTGGCTGCATCTTTTTGATTAGCTAgacta
taaggcggtctccctccatatattttttgtgcataTCATCACTGGTATCT
TTTCTGTAGtgttaaatggtaaataaataaatacttacttacttaccaGC
ACAGATGACAGACACAGCAACCATAATATTGCAGCAATACAAATCAAAAT
GAAAGGGGCTAATGATAAGCACATGTCACAAAATACGCTACCATGAAGTC
GGGTAACCGCGGGGTAAcctgcatcagtggaggctaacatccATAACATa
cagccctcaaatgactgcctccgctgatgcaagttacccgacttcaggGT
ACCAATCTTGAGGAGCAAATGTCCTTCTAAATGGCAAGCCCCTTGGGGAA
TAAAAAAAAGACAGCCTTACCAGAAATTCGTAAAGTCTCAGACCCACCCC
TAAATTAAAGGTAAAGCTAGGGACTAGGGGGTAGAATCTTTGCTGATAAC
TTTCGATCCGACATTCACAGGTAGCCACTTTGtgtcccgggggggtacta
gggttgcgagctgacggggggtgccACCCAACTTTCAAACTTCGGACCCT
TACcgagactaaaaaggagaaaacaaaggagaattttgggaattttacaa
cccttagcgggacgaaatttgacaaatttgaccaaatttcaatctttcag
ggggtaaaaagttgaaattttcctatttttcaacccttagtgggactgaa
atttgattttctgatttttctgacccttagcgggactttgaaagtccaaa
aaaggtaccctcttaataagggcggcacataccgtacccttcaTTTGCCA
AAGTACCCCCCCTGCTTTGTGTtcagaaaataactcacaaagctCCCAAA
GTCAGATAAACCAATTAACTAAAGGCAGTGAAGTATGAGAGGGTGTGAAG
GTCAATTGattttcaattcatgatatgcaccattgcaatgtcttccgttc
cacccaatagctgattggttgaaagNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgcctagattgcct
gaaaacgcatcatgtgcatcatgatgtgaattattttttaatcgttcgat
gctgcacaagatgtttttagaactacctacttttactgattattgaagga
gtaaataccgcctttactgtctctaagttactgAAGTATCactgtattgt
attgtagtagcaatataagttaatacggagagacgaccatatcgCATTTA
CAATCAgtcacaaaatacttggcacaaaagggaaattcaccggggtgttt
tgaaaccacgatcgatttttaagtgctctaaagtaggttcgaagggtaga
gtttaaACTCTGAGCTTTAACGCTAGACgtaagacttacgaccttaggtg
tgaggatccaaaagttcaaaaatggtctagtagggcttgaaatatagcct
agaaaccaacaAATCCCTCctagatcgaaataatcgatgaaatcaagttg
aaggcctaaaaattgacattctcgctcgaacttcaattttagaaaaatgg
taaagtgccaatatattatggcactgattgtagtgttgacggagaaaatt
ttatctagactcatttgctggatgcagtatttgcatcacaaaagttgtca
ttaaaaaaatgcgcccgcagaaaaataataaaaatatttgtttaaatatc
gtaaagttttgcttatttagaataacctcaccatgacaataagtcaatac
tgtaggacatccaagattgtgcgagcgaagcgagcaagaaaattttactg
gttaaaatcgtggaatagacttatcttttttgaaaatttttctgcatgaa
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaatggcaaatttcgcg
gaatttaatttcgcgaatgagccgatttcaaaagtttcacggaatttaat
ttcgcgattaagaagaagttatcaacttaAATTAACTTCTAACCATCACG
GAgttatttatatttgtttatatatgataagaaatacacgttataatgtt
taaaaatcaattgtgtccatattttttggtaatacctggtcaaaaacaac
aaaataaaagaagaagaaaaaaaatcgaatttcgcggaatttaatttcgc
gatttaacaagtttggtgtgtttcgcggaacttaatttcgcgaattacac
ccaaatttaaattgtaaaatgaaagttattttcatttataaaaaaaaata
ttattctgaggttttcaataaaaaattacttggcACTTATGGGCCACCAT
ACTTATGTGCTTAGCTTCAGTAAACCTCGAGTGcttcaatgaagatgaag
aaggtaagaagataaaaaatgcgctggataattttcattataaTAGTTTG
GTCAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaagtgagaaaagacac
gaacgccttattttaatgagtgttgttatgatttttttgattgcggccgc
gtacaggaactcgccaaatgttcctaactgtacTTTTTCTagcgagtttg
attactctgttctcacacttatgtctttttttttcgcgtccttttccgtg
attacttttatttatgtttttaaagacaggtaagaaggcatattgatgta
actgttggGATCACTGATACATTTACatacatttatttatttacattaca
tacatttatttatttatattagattttaaataaacaaacttttatacata
actaacttatattttaatctatttATTGCTGACAGCacgtttaaaaattt
ttcatttttgtaatttttacatAGAATTTGCGAGATCAGGCTTAATTGTC
TTATGCAAATAcataactagaactagaactcgAACTAGATAGACAAAAGA
TTCTTTCCTCCCTGATTGCTAAGCAAAAAAGatagtttccatcagcgatt
ccgaccttcatattattcctatctctaaaaagAGATTTACaggaaacaca
tatttggactaTGTACCCAATGCTGCATGCAAGCAATTAAGCTTAAGTCC
TGCTTAAAGGGGGACAAAACTTACCATGTGGTCAAAGTCTGGTGTTGATA
ATGTTTAGGGCTTTCTGGTGCTCATAAGTCACTGGCCATTATCATCAAGG
GGGCAGACCTGTATCTAAGGACAGTTATtaacactaggaaatcaaggttt
caaaataataacatcAGCCATATACATAATGTATGtacaacaacaaggat
gagagctCTGAATCAAGTTAGGTCAGTGTATGAGGTCTGCCAATTTTCTG
GGAAATAGCTTCTTtggtggtgcgcggatctaggtagTTGTCTTTTCCCc
catctttttcttgggaagtttttcttcaaataagtttttgaGGTTGGTCC
GGGTCAAATCTTTTTTATCTATGGCTCAAAATGGGgataatttttcaaag
tttatttcaaatgttaatttcattaaaaagcaccagtttattttttcaca
aaaCCCTTCAGAAGTTTTGGGGCGCATTCTTTTGCTGGTGGGTCAAGTAA
ATGATAAAGCGCTTTCTGACAATTAATTTTTGTTATGCATTTCGGTGAGA
CactagtgtggctaactgaaGGACTATGCCCGTTCCTGTTGTTTCACTAG
AGAAACATATCAGCCCCCTAAAACGCAATTAAAACTGCTGACATTCGCAA
AAAAAGCTTACAATTAAAACTAGTGAAGAGGGACTTAATTTCTGAAATGT
TTTTCCAGTGAGAGACTTGTACTTTTAGGTGTGTGAAATctggaaagttt
tttttataatatgaaATGAacctttttgacaaaattttctttaaaaaatt
tcaggtTATCGAAAAAGAATTACGTCTGGAGAGATTTCACTTGAAGATTT
AGCCCAAACAGAAAGTGATTGCAGTAGTGCTAAAAAAGGAGGGGATCTTG
GATTCTTTTACCCTGGTCAGATGCAAAGTAAGTTTATCATTCATGATTCA
ATGCTGCAATGCTGTttataatgtttttttcaactatttgtgcaaaaaaa
ttacatttctggCTTTACaaactttctttataagatCAAGTAAATTTTAA
CTGAGGCTCTGCTTTTCTGATTTTATCGCGATCTGAAGGCTTAGATGCTC
GTGGCTTAAAACTAATATTTATATTAGTagtttctgaaatctgaggctct
gGTTGTCCTTCATTTGTTTTTAGGTTTGTGCCAATATTAAACCTCATAAG
CATGaattttttcttatgaaaaacgtaCACTATACTAAGAAGATTTCTGA
GAAAGAACTTCTCCCATCTTGTCTTGTCCAACGAAACGAAAACTCGTGGG
CCTGTTGTAAAAACATAAATTTCTAACATCATTTTTGTCATCCTTCTTAG
AATTCTAAACTTATTATTATTGGTGATCAAAGACATTTTTGATaaacaat
gataaaaatcaAGTTACAATTGACTTTCTCCATTCGAACGAAATGTATAA
ATACAGAACTAACAGAAGGACTGATTACTTTTTTCATCTTATAGAACCAT
TTGAAGATGCAACATTCGCTTTGGAGGTCGGAGAATTAAGTGAAGCCATC
TCAACCGATTCTGGTATTCATCTTATACTACGTACAGGCTGATTGAGTCA
caacttgtttttaatttgacattttgtttttatttcttgttgcttttttt
tgcatagatatctctttatattttttttttgtagtcATTTACgtaggatt
tttttatttatcaatcatttttatgATGGAAACAATACAAAAAGGGTCTA
AATAAAACAAGATGTATCTTTTCCTGGAAATCCTTTTTATATTTGCTAAT
TTCATTATAATACCGATAGAGAGTGGTGATATTGATTTTTGGTTTATTTG
AGTTTACATAGTTAAGGTACATAGTTAAGGGGGTGACACCTTCCGAAAAA
ACGAAGAAGGAGga

Coding sequence (CDS) from alignment at scaffold_319:83078..98541+

>TCONS_00059164 ID=TCONS_00059164|Name=TCONS_00059164|organism=Clytia hemisphaerica|type=CDS|length=1359bp|location=Sequence derived from alignment at scaffold_319:83078..98541+ (Clytia hemisphaerica)
ATGTCAGGATTACCACCAGGATGGATAGAAAAGACATCAAATTCAACAGG
AAAGAAATATTATTACAACACACAAACTCAACAGAGTCAATGGGAAAAAC
CAACAGATGATGATGTCAAATCTGTGAGAGCATCACATCTTCTTGTGAAA
CACAACGAATCAAGAAGACCAGCTTCCTGGCGACAAGATAAAATCACCAG
GTCTAAAGATGAAGCTTATGAAATAATTGCAGgtTATCGAAAAAGAATTA
CGTCTGGAGAGATTTCACTTGAAGATTTAGCCCAAACAGAAAGTGATTGC
AGTAGTGCTAAAAAAGGAGGGGATCTTGGATTCTTTTACCCTGGTCAGAT
GCAAAAACCATTTGAAGATGCAACATTCGCTTTGGAGGTCGGAGAATTAA
GTGAAGCCATCTCAACCGATTCTGGTATTCATCTTATACTACGTACAGGC
TGAATGTCAGGATTACCACCAGGATGGATAGAAAAGACATCAAATTCAAC
AGGAAAGAAATATTATTACAACACACAAACTCAACAGAGTCAATGGGAAA
AACCAACAGATGATGATGTCAAATCTGTGAGAGCATCACATCTTCTTGTG
AAACACAACGAATCAAGAAGACCAGCTTCCTGGCGACAAGATAAAATCAC
CAGGTCTAAAGATGAAGCTTATGAAATAATTGCAGgtTATCGAAAAAGAA
TTACGTCTGGAGAGATTTCACTTGAAGATTTAGCCCAAACAGAAAGTGAT
TGCAGTAGTGCTAAAAAAGGAGGGGATCTTGGATTCTTTTACCCTGGTCA
GATGCAAAAACCATTTGAAGATGCAACATTCGCTTTGGAGGTCGGAGAAT
TAAGTGAAGCCATCTCAACCGATTCTGGTATTCATCTTATACTACGTACA
GGCTGAATGTCAGGATTACCACCAGGATGGATAGAAAAGACATCAAATTC
AACAGGAAAGAAATATTATTACAACACACAAACTCAACAGAGTCAATGGG
AAAAACCAACAGATGATGATGTCAAATCTGTGAGAGCATCACATCTTCTT
GTGAAACACAACGAATCAAGAAGACCAGCTTCCTGGCGACAAGATAAAAT
CACCAGGTCTAAAGATGAAGCTTATGAAATAATTGCAGgtTATCGAAAAA
GAATTACGTCTGGAGAGATTTCACTTGAAGATTTAGCCCAAACAGAAAGT
GATTGCAGTAGTGCTAAAAAAGGAGGGGATCTTGGATTCTTTTACCCTGG
TCAGATGCAAAAACCATTTGAAGATGCAACATTCGCTTTGGAGGTCGGAG
AATTAAGTGAAGCCATCTCAACCGATTCTGGTATTCATCTTATACTACGT
ACAGGCTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037261	XLOC_037261	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059164-protein	TCONS_00059164-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059164-exon-scaffold_319-1491911889:83078..83493	TCONS_00059164-exon-scaffold_319-1491911889:83078..83493	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1510915933:83078..83493	TCONS_00059164-exon-scaffold_319-1510915933:83078..83493	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1575043694:83078..83493	TCONS_00059164-exon-scaffold_319-1575043694:83078..83493	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1491911889:97432..97554	TCONS_00059164-exon-scaffold_319-1491911889:97432..97554	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1510915933:97432..97554	TCONS_00059164-exon-scaffold_319-1510915933:97432..97554	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1575043694:97432..97554	TCONS_00059164-exon-scaffold_319-1575043694:97432..97554	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1491911889:98122..98541	TCONS_00059164-exon-scaffold_319-1491911889:98122..98541	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1510915933:98122..98541	TCONS_00059164-exon-scaffold_319-1510915933:98122..98541	Clytia hemisphaerica	exon
TCONS_00059164-exon-scaffold_319-1575043694:98122..98541	TCONS_00059164-exon-scaffold_319-1575043694:98122..98541	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_319	supercontig	scaffold_319:83078..98541 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
251.561	258.643	200.367	207.555	105.958	82.2675	124.248	123.778	131.265	123.685	98.3899	100.435	72.8932	69.5907	89.6875	99.5922	103.549	94.7786	32.3331	41.9903	57.307	49.4576	123.661	109.024	60.082	65.3614	98.267	73.792	58.4363	57.4511

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom
IPR000297	PPIase_PpiC

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0016853	isomerase activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0005515	protein binding

Blast

[Close]

BLAST of TCONS_00059164 vs. Swiss-Prot (Human)
Match: PIN1 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens GN=PIN1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.952e-56
Identity = 90/156 (57.69%), Postives = 112/156 (71.79%), Query Frame = 2

Query:  194 LPPGWIEKTSNSTGKKYYYNTQTQQSQWEKPTDD----------DVKSVRASHLLVKHNESRRPASWRQDKITRSKDEAYEIIAGYRKRITSGEISLEDLAQTESDCSSAKKGGDLGFFYPGQMQKPFEDATFALEVGELSEAISTDSGIHLILRT 631
            LPPGW ++ S S+G+ YY+N  T  SQWE+P+ +          +   VR SHLLVKH++SRRP+SWRQ+KITR+K+EA E+I GY ++I SGE   E LA   SDCSSAK  GDLG F  GQMQKPFEDA+FAL  GE+S  + TDSGIH+ILRT
Sbjct:    7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162

The following BLAST results are available for this feature:

BLAST of TCONS_00059164 vs. Swiss-Prot (Human)

BLAST of TCONS_00059164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIN1	3.952e-56	57.69	Peptidyl-prolyl cis-trans isomerase NIMA-interacti...	[more]

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TCONS_00059164 (transcript) - C. hemisphaerica