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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059114 ID=TCONS_00059114|Name=TCONS_00059114|organism=Clytia hemisphaerica|type=transcript|length=3154bp GAAAGtgcattttcatattttcatcatTCATGctttttttggtcaatttt tatttcttttaccACCATTTACTTTAATTATATCTCAATCCTTCAATTTT ATATAGCAAAAATTAAATACAAGTGCCGATGATGATAAGGAAGGTAtcaa tattttgttgttttttatatttgattggtTTTGGCTATTCACTtcccatt ttgaaaaatgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCACC TGATCATATTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAGG ATTATCATCGGGAAGTATTCTTAGGTAAGCTTGTTAAAGAAGGAGTTTTG GTATGGGAGAATATGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATGA AGTTGATAAAAGTAATGATAGACAAATTGATAAAGAGGAGATGAAGAATT GGATTCATGACAGAATCATGGAGCATTATAATGCAGCAACAGAAGAAAGC AATAAGATTTTTGGAAAGGTAGATCATGATCAAAATGGATTAGTGGCATG GCCAGAATACAAAGCACAAATTCTTGGTCTGAACCCTAAAGATTATGAAA AAGACAATCTGACAGTGATTGAAGACAAGTCTGgtcaatttgaaaaagaa attcagcATTGGTTAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACAA GAATGAGTTTTTGGCCTTTTATCATCCGGAACATAACAAGAAAACAATTG AACTAATGGTTAAAGAAATGCTCTCATCCTTTGATAAAGATAACGACCAT ATCATAACATTAGAAGAATTCACAGCATTACCCCCTGGGGAAGTCGACCC TGAAGAAGCTGATGAAGATAAGTTGTACCAAGAAGagaAAGCTAAAGAAT TCAAAAGAGACATGGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGAG CTTATGCAATATTTAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGGC AGAATTCCTTATAAGATCTTCAGATAGAAATAGAGATGGTAAAATTAGTG AACATGAAATGCTAATGAGCTATAGTATCTTTACTGGTAGTAGTTTAACG AACTTCGCTCAAGTGCTACATGATGAGTTTTAAAGAAGTGCTGTCTTGCA TTTTTGCTCTCGTGGTGAATCAAACTGTCTCGATTCAGGATATCCGCTTC TCCAATGGATTCTGATATTACTTATCGTTGTCAACATTTGATTGGCTCCA AATGACGTATGGGATAGAAGTGGTGCATAAATCATGAATGAGACtaatta tctttattataataATGAATTTCTTTAAAGGTTAAAAACCTTTTGATAAC ATCACCGAGAATTCATTTAAATCTTATCTATGTTGattgttgttattttt agaaaatttaagaacgaaTATAATGATAACAGCTTTATTTTTGTACAATT TAACTTTTGCGAAAAATCTCATTATATTACTATTCTTTAAGATATATCCA TGGTATATCTAAGCTTTGAATTTCCATAAATAAGTGGCGATGCCCTAACT TTGCATCTTAATTATCCGaatacactcattttgttttataagcataacgt ttataagcataacgtttataagcatactgaagctcaaatttccagaaaaa ttaagcatatgctaagcataccttgaggctcagccaaagaaatttttaaa atcataatttccaaaacttcagaaaataacagaagaaagaatcatatatc atatatcatatggtaaacattcgaaaacaataaaatgtcttcatttctct CAAGATTAAAGAGAGGGGACAATGcgctcaaaattgagctttacttaagc atagtgagcttcagccgaaatttaccgtatgcttataaaacaaaatgagt gtaaCCATGGATTTATTTAACATGCACCTGAGTGTTAGTAGGGGAGGCTA ACTTTTATGAGCCGTAGCATTTTTCGTGGGACTCGACCGCATGCGATTGA TTAGTAGATAGGATTATGAGAGTTTTttgagaaatgaaaaatgacaaaag taAGTTGATGATTTTTCAATGCTTTCGAAGTTCAAAAATCTGTCAGTTAG AgtacgattgacgtcaaattttgtctaaaacgTAGTccgaatcgcagacc tctatagatatattctatataagaaaaacttttcgctagaggatgagcag atgCCTATCTAAAAACAGATTCCACAGTATTTCGAACTTTAAATCATCAT ATCTTTTTGTGTGTTAGAGTATAAGATTTGTTGTAGTATACTTTTGTTCA GAATTTCATGATAACTAtcatttttgctgaatttgacTTGTAAGaatcgt caattttttactcatttttgtgGGGTTAGGGGTTTTTCCTACGACGTCAG TTTTTTGGCATAAAAACTGTTGCTAAGCCTAATCCGCGGGCCCCTCTCAA AAAGTCTCCTATCTGCTTTCGAATCAATCACATGCGGTTGAGCCCCACGA GAAATGCTACCGATCATAAGATTGACCCCCTACTTTGCACCTGACGTTCT TTTACAGTATGTATGTATTTACATTATGTTTATTCTGCTCTGCTGATTAT TTTCCGTGGTTAAGTTTCTGTAGTGCTTGCTTGAAGAGTGAGTACTGTAT ATTTCCTACACGTTTGGCTAAAAAACAGACAATTACAATATTACCGATGT GATGCCCGATGGTTTCTATATAAAAAGTATGAAATGGAAATTTGCATATC TCATGTTTACGTAAGTTCTTCCATTTCGTGTATCGTGTAAGCTAACATTC ACCTGATTTTGACCGAAATTGATGGATAAACAGTTATTTCGTCCTTTAGC TGAAATTTTACTTTGATTTATGAATAGGTGTTAGGTCTGGTGTAGACGAT ATTTTATTTAATTAGTTTTTGACTGGAATTTCAGCGTTTGCTTTTTGGTT ACGGCTtatgttatttattttattttacggGTTTATAGGGTAAATTAGTT TTTATGTTTCAACGTTGTATAAATTGATTGTATTGAAACTAAATCGAGGT TaacttttttatactttttgagaatattttgtgaattttttatgTAACAT TTGTATCATTAATTGAAGATTTACTAAAGTTTGAATTATACGCATGCGTC CAGA Run BLAST on NCBI protein sequence of TCONS_00059114-protein >TCONS_00059114-protein ID=TCONS_00059114-protein|Name=TCONS_00059114-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MMIRKVSIFCCFLYLIGFGYSLPILKNATREEIKRKDLLPPDHIAGAHME QDGHINKDYHREVFLGKLVKEGVLVWENMAGYKKLIKVFDEVDKSNDRQI DKEEMKNWIHDRIMEHYNAATEESNKIFGKVDHDQNGLVAWPEYKAQILG LNPKDYEKDNLTVIEDKSGQFEKEIQHWLKADFNGDKVLDKNEFLAFYHP EHNKKTIELMVKEMLSSFDKDNDHIITLEEFTALPPGEVDPEEADEDKLY QEEKAKEFKRDMDLNSDGKVGKEELMQYLDPRNKEHAVKEAEFLIRSSDR NRDGKISEHEMLMSYSIFTGSSLTNFAQVLHDEF Run BLAST on NCBI transcript from alignment at scaffold_318:2816..12931+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059114 ID=TCONS_00059114|Name=TCONS_00059114|organism=Clytia hemisphaerica|type=transcript|length=10116bp|location=Sequence derived from alignment at scaffold_318:2816..12931+ (Clytia hemisphaerica) GAAAGtgcattttcatattttcatcatTCATGctttttttggtcaatttt
tatttcttttaccACCATTTACTTTAATTATATCTCAATCCTTCAATTTT
ATATAGCAAAAATTAAATACAAGTGCCGATGATGATAAGGAAGGTAtcaa
tattttgttgttttttatatttgattggtTTTGGCTATTCACTtcccatt
ttgaaaaatgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCACC
TGATCATATTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAGG
ATTATCATCGGGAAGTATTCTTAGGTAAAtgatttttagagtttttttta
tCCCACCCACCTAAATTATCATTTCAGTattttgaatgctaaaatcgatc
acaatattccaacaaaaagACGTTGACTCAGCAAAATCCAGCTGCAGTAG
GCATTATTTNGTCCCAGGCCTCGGAAAATCGGGCTCGATTGAGTGAATTC
TATTGGTCGTTGACTGAAAGTCGGGTAACATTTTGAAATCGGAGCCAAAT
ATCCCGTTTCGGTTtcaagtaaacaaaaataaCTGATACAAAAACGGGGT
TTGCAGTTTGAAACAGTTTGAAcagcattttcatattttcatcatTCATG
ctttttttggtcaatttttatttcttttaccACCATTTACTTTAATTATA
TCTCAATCCTTCAATTTTATATAGCAAAAATTAAATACAAGTGCCGATGA
TGATAAGGAAGGTAtcaatattttgttgttttttatatttgattggtTTT
GGCTATTCACTtcccattttgaaaaatgcaacaagagaagaaatcaaaag
gaaagaTCTTCTTCCACCTGATCATATTGCTGGTGCACATATGGAACAAG
ATGGACACATAAATAAGGATTATCATCGGGAAGTATTCTTAGGTAAAtga
tttttagagttttttttatCCCACCTAAATCATCATTTCAGTattttgaa
tgctaaaatcgatcacaatattccaacaaaaagACGTTGACTCAGCAAAA
TCCAGCTGCagttaacctgagatcagattgtggttgttttctgcacacca
cgctgaagctttaattttcaagcgcctttagaggtttaccgtgcgcgtaa
gaaaattacgaacatctgttatcaggttagctgCAGTAGGCATTATTTTC
AAACAAGTGGCTAGATGCACAGATTGCTCAGCATGCCTTGTGCGTGGTGT
GCCACAGGATACCTTGGGACTACAGTGTACagtatctgacaaaacatggg
acagcaattcatCGACAGCTTAAAAAATCTGTGTgtcaatttcaagaaat
tttgcgCAAGTCATCAATGACAATGATGCAAGAAATCTACAAAAGAAACC
AGtaaaagatcaaagagaaaagATGTAATTGGGAAAAAATGATTGTTCAC
CAATCTTGGAGATTTCCCAAACTCAAGATTAAGTTGGTGGGTTTCACGAG
TTTTCCTGTGGCATATATATGAAGACTCCCTGGATTGGTGAACatgaaga
aataaaataaaaaataaaaattcacctccctggaaaatatttagattgtt
ttattttgttcaatccCAAATGCTTATGAAAGCGCCAAATATTTTACCAT
CCAATCACGGCAATatagattgttttattttgttcaatccCAAATGCTTA
TGAAAGCGCCAAATATTTTACCATCCAATCACGGCAATatagattgtttt
attttgtacaATCAAAATATTGCTGTACGATTGTTTAACAAGAAGTATCC
GATCAAATGGAGGTAAAGCACTTTTATCCAATTAGAAAGGattcttagaa
aaaattaaaatctttgcatcaaattcccgctctCGTTTGAGAattaaagt
taagaaaaaatTCATCCCTTAGAATCAATAGTGACAGTGCTGAATTATTG
AAAGTGACAATATTCAAAGCTCCTAATGTTTCACACAGATTTCGCATTAA
GCAAGGTTAAAAGCCTTGAACATATATCATTCATAGTCGCATTTTAACCA
TCTAGAGCCTTACAACGTCCTAACAGACCACCAACACAAATAAAAGAAAG
CGTTAATAAAAACTGTAAATGATCTTGTGAAAACCCCAAATGATAAAGGG
TTTAGGCAGTTGCAGTCTTACTCCAATTCAGCAAAGCTTTTGACAAAGTG
TGTcgtcaggggggggggtgttagAGATAACAAACTTAATTGCATTGAGG
ACTTCTTAAGAGAAAGATCACAAAAAGCTCTTGTCAGAGGATCTGAATCA
ACTGAAGGGAGTGTTTAAGGTTCAGAAGTACCACAGGGTTCGGTTTTGGG
TCCATTATTGTTTTTTGGTTTATATCAATGATACTTCAGCAGCAACCACT
TCATCAGAAATAGACTTATACACAGACAATGCCTTGCTCTACAAAAATGT
CAAATCTATACAGGACAAGCACAATCTTCAAAAAGACCTAGATCATCTCA
TTGAGTGTAGCAAGCCTGGTTGATGCAGTTCAATGCAGAGAAAAGCAAAG
TTGTACAATATATTATGCAATACGCTCACTACAAGAGGCTGCAAGAGGTC
ATATTCAGAGTAAAGAATCTAAtaataaacaaaatcttttaaaaacaaat
tttcaagaaTGACCAATAAAGTAGtgctaaaaataaaattaaaaacaatg
tAATAAAATGATATAGTAAAGATTTATTGCAttattttaaaatgtatttt
tagCACTATTATactggtcatttttgaaaatttgtttttaaaagatttgt
ttGTTATTAGATTTTTTACTCTGAAGATGACCTCTTGTAGGAGCATCTAG
TATATAGTTTTtaacaacatcaaaaacatgaatcTTCTGATTATTCTTTT
TATCATTACATTAGTCGCCCaaggaaacatttttcaaagttgtaCGAATA
ACAAATAAACGAAAAATAACTGAAGGTACCTACTCAATCCATGGGAACAA
TATTATATTAAACTTATTAAAACTGCAAAATACATAATTCTCTtaatata
ctttttatttttttaatggaagataacttttaaaatattgatatatgGCA
CTGGTTCTTTACTAANAACTTGTTAAAACTGCAAAATACATAATTCTCTt
aatatactttttatttttttaatggaagataacttttaaaatattgatat
atgGCACTGGTTCTTTACTAATCAAGCACTCTTATGGCATTGATTTACCA
CACTTGTTTTTATGCATAATTCTCGAAAAGAAGTTGACATCTAAGTAGCA
CATAACAACCAAAGCTGCTAAAGCACAAAACTTCCCACACTTAATCTCAA
CGTAACCTCCAAAAATGCTCAAAAGAGGTAAAGCTCCAAAATTACATTAT
TGTTGAGTATGCTTCTACAGTAGGGATCTAGTTGGAGATCAGTCTTTAAT
ATACCAATTAGAAAGTATGCAGGGCAAAATTTTGCTGGCAATTTGTTTGG
TGTAACCGGCAGTGTAATAAGAGTAGCTGGCAAATTACCAGCTGTCATAG
GGTGGAAATAGTGCCGgcaaaaattgtaaacaagTTTTCTTTGCTAGCGG
AAAATTGCTGGATTCTTTTCTTTGTTGCCAGCTGATTGCCAGCTAAAATC
TCCCCTTAGGCCAAAACCTTTTCTGATAATAGAATTTACACAAATGTTGC
TTGCAAACTGTCTACCGTAATTGATAGATTGCCGGATTCAACAGGTATGT
AGTCAGGATGCCGATAGAGATTTTCTGATATCAAGCTGgaagaaattctt
ttttgtaCTTGTTTGTATTAAAATCGCTTTGAGATTCACAATTATGAGTC
ATGATGAATAATCAAAAACGTTAGCAAGAAAACGATAACAAACTGTACAT
AAATTGcgtattagatttttttcttatagttgttttgatgctggagtcAG
CTGTAGTTTTTAAGGTTACTTAGAACTTATGACATCATGATTAAGAAAAG
GGCTTTTTGTAGGTCTTTGTTGTGAAAACTATTATATTATTGTTAAATca
acttttcatttttgacaaaaatttattgttttcacTAGTAGCAGAGTAAT
TCTCCTTTAGCATATCTCTACAATTTTCACAGGTAAGCTTGTTAAAGAAG
GAGTTTTGGTATGGGAGAATATGGCTGGTTACAAGAAGTTGATCAAAGTC
TTTGATGAAGTTGATAAAAGTAATGATAGACAAATTGATAAAGAGGAGAT
GAAGAATTGGATTCATGACAGGTATATTTGTCTTCTTATCCTTTTTCCAT
TTTCTGTACTTTTGGAGTTACTTTCATAACCCTTTGAGACCCATAACCCT
TGTAGTTGAGCTACAGACTTGATTTTTTGAGTATGATCTACATTTTATAT
GCATATCATTATCTCGTTTACGGAATCTTCATAAGTCTTGTCGTTCTCGG
GATAATTTTTGGGCCTAATAATGGTCATAAGGGTAATTTCAGGTTTGTGA
AATTATTTACAAGAAACTTTTTTAAGGGGTTTTTCTGGGATTAATTGGTG
GATTTCATTCTTCTGACAGGAtaaacagacagacagacagacagacgtCA
CTAacgaaaaagtttttattgaaaaagaaaatatgttCAGTACATATCAA
CATAATGttatttcaaggtttttaaatCATCTGGTTGGAAAGTTATCAAG
CCTCTAATATCCGGGTAACCAGAGAAGACCCATTGGGTTTGAAAGGGATA
ATGGTGGGGCAACTTTCATAGCAAACAAACTTTAGCTTAGCTTTAAAATC
AGAAAGTCTTAACATATAACGTTACGTTATAAATAACGTACAGCTTTCAG
ACCAGAAGACTGCTGTTTTGAAGTTAAGAAAGTAGCGCCCTGCTTATGAA
AGTAACTCCGATGACAGCAGAGCATTTAAAAAGGGGAAACTTCCCCTAAT
TTCCTTTCAACTTTATGACTGTGTGTAAACAAAGTCCTGGTAAGTAGGGA
AGCTTGAATCGGTTGAGGGTTCTTAACTTCATCAAAAGAtatgaaatgaa
ataaataaaggtTGTTAAGTTTTTTGTATTTCTTCTatctttttcaatca
tttttacacaaacaagagaaaaataaataaaaaattcaaaaaatataatt
catGTTCAAAGCTCTGTTTTTCTCCAGTCTCTTTCTCTTCAATTTATAGT
TCTTGGGACTTTTAAACCCAATGTGGTTGGGGTTCGAAGATTTTACAAAT
TAAGGTGTCGGTTGCTGAGTAAGGTGGGGAATGTGCTGATAAgagatttc
aggtgggggtaacccttTTTAGGTGGGTTGGAGTGTTGCTCGCTATGAAA
TTTATTATTATGATATTCAGAATTATCggtgatccaaaaaatatctgcaa
tctgattggttaaaaagagtacaatatatcttgtattttacatgtaaaaa
tataaattgacgaaaagatgttgttgcattgtagcggtagtagcaatcta
acgtcactttgctacaaaagtgccctgcgctttttcccaacacaaaaatt
gcattttttgggtcaccgataaaccagttatcagacatttgctcgtacaa
tatggaaatattttactcgttccgtaTTTTCCGTATATTTNATTAATTCC
CTAAACTACTAATtacttttttcatgattgtgTGAATTATATTGTAGAAT
CATGGAGCATTATAATGCAGCAACAGAAGAAAGCAATAAGATTTTTGGAA
AGGTAGATCATGATCAAAATGGATTAGTGGCATGGCCAGAATACAAAGCA
CAAATTCTTGGTCTGAACCCTAAAGATTATGAAAAAGACAATCTGACAGg
taaaaaagtctaatttttcttgattttgttttaaaaaatctttgcaACTC
TTTTGTAAATAACGTATATTATAAGTCCACTTGTTTTTTGTTTAGTTTAG
AAAATGTCATAAATTCTACATTATGTTGTATTATCTTACAAAGTTATTCT
CCTTTTAGAAATAGTTACATGCATTTACTCAGAGTAAATTTCATACTGAT
TATTTGTTTTTTAGTGATTGAAGACAAGTCTGgtcaatttgaaaaagaaa
ttcagcATTGGTTAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACAAG
AATGAGTTTTTGGCCTTTTATCATCCGGAACATAACAAGAAAACAATTGA
ACTAATGGTTAAAGAAATGCTCTCATCCTTTGATAAAGATAACGACCATG
TAAGGACACTGTTAGTCTGGAACCATACAAATTTTTACTCCATTTCACAA
AGCTTACATGAGATAAAAATTAGTATGGTAGAattggagattttgaattt
gccaccagaaaaaaaccgtttgaaaactggccaatcagaattttgttgca
taaattttttttgttttaacagCCAACACAAATCAAAGACATATACTTTT
TCGATCTATCTAGCGATAAAAAAAAGAGCaattaaaatcaacaaaataaa
cTAAGTTtgcctttcttctctttttttgcTAGAATGTTCGTTCTGCTAGC
AATCTTTTGAAATGGAGCTTCGTTCCGTTCCATCGTTCCGAATTCCAACT
TGAAATAACGTAAAATGGAACAAAACCTTTTAATATTCtttaattttcat
atttctagATCATAACATTAGAAGAATTCACAGCATTACCCCCTGGGGAA
GTCGACCCTGAAGAAGCTGATGAAGATAAGTTGTACCAAGAAGagtaagt
ttttttaaaatagAATTCATGAATTATCTCCTAACGTTTTCTAACTTTAG
TCTTAGGTTTCCTCTATCGAATAATTGGAAGTGGTTTTGCTCGAGTATAC
TGATAGTTCTACTTCATCATTTTATTGGATTACCTGCAGTAGGTAAAATA
AGTTCCTCGCCAAActtaattttggatttttgctgCTCGCTGCTAAAATT
GTTCTTCCTAACTTATTAAATCTCAATTAAAACATGTCTATCAGACTTAT
TTTTTGAAGGAATAAATTTCAAAGATGAAGTTAATCATTCTAGCATTTTA
GCTCGCTTATGCTTCTTACTCGATGTCTTTAGAGGGTGTCCTGAGTAAAA
TACCCAGATCATTGCCATAGGTAGAAAAGATTATGCGTGTATCACGGAAT
CTAACAAGATGGCTgagagtcgaaaatttcgccttttGTGCACAATTATT
CATTTATGAACAACatttataaatgaaataaactGGGGAGCACTTGGATT
GAAGAGTGTCGGGTACATGCAACCAAGCCTGTGAAAACtggcccttagag
agaccaaattcaCGCGCAAAATTTAACTTTGAGTATCAATAGAGACCCat
agagagactttgggagaTGTCTTTTAATTTATGTCGTAGTCTGTTTTTTA
TTTCGTACCCTTAAAGAGACCTGAAGAGGGGAAATTCTGACCCCCGAAGG
GAGACTTTTGCCTTTTTTGTGCAACAGAGACTTGGGAAGgtaagaaaaca
gaaaatagaACAGAAGCATAGAAAAGCTTTATTTACAAATAGTCAAAAAT
AGTAAAAGATTCTGATAAGAGCagaaaaattagcaaaattatcttgtaat
atactgttctttggaatagactaaaaataggtcgtaaaaaagatgtcacg
ggaccggaggcttggccccctactatacaCAAAGTATTTTCCAACGGTTT
CTGCGGTCTGACATAGTCTGCCACAGTACAATTTTTCAGGACACCCTGTG
TAATAATGATCTGGCGTGAAGCTTCGCATTTGTTGGCAGGAAGCCTGTTT
GATTTACTGCATTGTATCCTCATTAtagacattttattttttcttcagga
AAGCTAAAGAATTCAAAAGAGACATGGACTTGAATAGCGATGGAAAGGTT
GGCAAAGAAGAGCTTATGCAATATTTAGATCCTCGAAACAAAGAACACGC
TGTAAAGGAGGCAGAATTCCTTATAAGATCTTCAGATAGAAATAGAGATG
GTAAAATTAGTGAACATGAAATGCTAATGAGCTATAGTATCTTTACTGGT
AGTAGTTTAACGAACTTCGCTCAAGTGCTACATGATGAGTTTTAAAGAAG
TGCTGTCTTGCATTTTTGCTCTCGTGGTGAATCAAACTGTCTCGATTCAG
GATATCCGCTTCTCCAATGGATTCTGATATTACTTATCGTTGTCAACATT
TGATTGGCTCCAAATGACGTATGGGATAGAAGTGGTGCATAAATCATGAA
TGAGACtaattatctttattataataATGAATTTCTTTAAAGGTTAAAAA
CCTTTTGATAACATCACCGAGAATTCATTTAAATCTTATCTATGTTGatt
gttgttatttttagaaaatttaagaacgaaTATAATGATAACAGCTTTAT
TTTTGTACAATTTAACTTTTGCGAAAAATCTCATTATATTACTATTCTTT
AAGATATATCCATGGTATATCTAAGCTTTGAATTTCCATAAATAAGTGGC
GATGCCCTAACTTTGCATCTTAATTATCCGaatacactcattttgtttta
taagcataacgtttataagcataacgtttataagcatactgaagctcaaa
tttccagaaaaattaagcatatgctaagcataccttgaggctcagccaaa
gaaatttttaaaatcataatttccaaaacttcagaaaataacagaagaaa
gaatcatatatcatatatcatatggtaaacattcgaaaacaataaaatgt
cttcatttctctCAAGATTAAAGAGAGGGGACAATGcgctcaaaattgag
ctttacttaagcatagtgagcttcagccgaaatttaccgtatgcttataa
aacaaaatgagtgtaaCCATGGATTTATTTAACATGCACCTGAGTGTTAG
TAGGGGAGGCTAACTTTTATGAGCCGTAGCATTTTTCGTGGGACTCGACC
GCATGCGATTGATTAGTAGATAGGATTATGAGAGTTTTttgagaaatgaa
aaatgacaaaagtaAGTTGATGATTTTTCAATGCTTTCGAAGTTCAAAAA
TCTGTCAGTTAGAgtacgattgacgtcaaattttgtctaaaacgTAGTcc
gaatcgcagacctctatagatatattctatataagaaaaacttttcgcta
gaggatgagcagatgCCTATCTAAAAACAGATTCCACAGTATTTCGAACT
TTAAATCATCATATCTTTTTGTGTGTTAGAGTATAAGATTTGTTGTAGTA
TACTTTTGTTCAGAATTTCATGATAACTAtcatttttgctgaatttgacT
TGTAAGaatcgtcaattttttactcatttttgtgGGGTTAGGGGTTTTTC
CTACGACGTCAGTTTTTTGGCATAAAAACTGTTGCTAAGCCTAATCCGCG
GGCCCCTCTCAAAAAGTCTCCTATCTGCTTTCGAATCAATCACATGCGGT
TGAGCCCCACGAGAAATGCTACCGATCATAAGATTGACCCCCTACTTTGC
ACCTGACGTTCTTTTACAGTATGTATGTATTTACATTATGTTTATTCTGC
TCTGCTGATTATTTTCCGTGGTTAAGTTTCTGTAGTGCTTGCTTGAAGAG
TGAGTACTGTATATTTCCTACACGTTTGGCTAAAAAACAGACAATTACAA
TATTACCGATGTGATGCCCGATGGTTTCTATATAAAAAGTATGAAATGGA
AATTTGCATATCTCATGTTTACGTAAGTTCTTCCATTTCGTGTATCGTGT
AAGCTAACATTCACCTGATTTTGACCGAAATTGATGGATAAACAGTTATT
TCGTCCTTTAGCTGAAATTTTACTTTGATTTATGAATAGGTGTTAGGTCT
GGTGTAGACGATATTTTATTTAATTAGTTTTTGACTGGAATTTCAGCGTT
TGCTTTTTGGTTACGGCTtatgttatttattttattttacggGTTTATAG
GGTAAATTAGTTTTTATGTTTCAACGTTGTATAAATTGATTGTATTGAAA
CTAAATCGAGGTTaacttttttatactttttgagaatattttgtgaattt
tttatgTAACATTTGTATCATTAATTGAAGATTTACTAAAGTTTGAATTA
TACGCATGCGTCCAGA Coding sequence (CDS) from alignment at scaffold_318:2816..12931+ >TCONS_00059114 ID=TCONS_00059114|Name=TCONS_00059114|organism=Clytia hemisphaerica|type=CDS|length=6030bp|location=Sequence derived from alignment at scaffold_318:2816..12931+ (Clytia hemisphaerica) ATGATGATAAGGAAGGTAtcaatattttgttgttttttatatttgattgg tTTTGGCTATTCACTtcccattttgaaaaatgcaacaagagaagaaatca aaaggaaagaTCTTCTTCCACCTGATCATATTGCTGGTGCACATATGGAA CAAGATGGACACATAAATAAGGATTATCATCGGGAAGTATTCTTAGGTAA GCTTGTTAAAGAAGGAGTTTTGGTATGGGAGAATATGGCTGGTTACAAGA AGTTGATCAAAGTCTTTGATGAAGTTGATAAAAGTAATGATAGACAAATT GATAAAGAGGAGATGAAGAATTGGATTCATGACAGAATCATGGAGCATTA TAATGCAGCAACAGAAGAAAGCAATAAGATTTTTGGAAAGGTAGATCATG ATCAAAATGGATTAGTGGCATGGCCAGAATACAAAGCACAAATTCTTGGT CTGAACCCTAAAGATTATGAAAAAGACAATCTGACAGTGATTGAAGACAA GTCTGgtcaatttgaaaaagaaattcagcATTGGTTAAAGGCTGATTTTA ATGGAGATAAAGTGCTGGACAAGAATGAGTTTTTGGCCTTTTATCATCCG GAACATAACAAGAAAACAATTGAACTAATGGTTAAAGAAATGCTCTCATC CTTTGATAAAGATAACGACCATATCATAACATTAGAAGAATTCACAGCAT TACCCCCTGGGGAAGTCGACCCTGAAGAAGCTGATGAAGATAAGTTGTAC CAAGAAGagaAAGCTAAAGAATTCAAAAGAGACATGGACTTGAATAGCGA TGGAAAGGTTGGCAAAGAAGAGCTTATGCAATATTTAGATCCTCGAAACA AAGAACACGCTGTAAAGGAGGCAGAATTCCTTATAAGATCTTCAGATAGA AATAGAGATGGTAAAATTAGTGAACATGAAATGCTAATGAGCTATAGTAT CTTTACTGGTAGTAGTTTAACGAACTTCGCTCAAGTGCTACATGATGAGT TTTAAATGATGATAAGGAAGGTAtcaatattttgttgttttttatatttg attggtTTTGGCTATTCACTtcccattttgaaaaatgcaacaagagaaga aatcaaaaggaaagaTCTTCTTCCACCTGATCATATTGCTGGTGCACATA TGGAACAAGATGGACACATAAATAAGGATTATCATCGGGAAGTATTCTTA GGTAAGCTTGTTAAAGAAGGAGTTTTGGTATGGGAGAATATGGCTGGTTA CAAGAAGTTGATCAAAGTCTTTGATGAAGTTGATAAAAGTAATGATAGAC AAATTGATAAAGAGGAGATGAAGAATTGGATTCATGACAGAATCATGGAG CATTATAATGCAGCAACAGAAGAAAGCAATAAGATTTTTGGAAAGGTAGA TCATGATCAAAATGGATTAGTGGCATGGCCAGAATACAAAGCACAAATTC TTGGTCTGAACCCTAAAGATTATGAAAAAGACAATCTGACAGTGATTGAA GACAAGTCTGgtcaatttgaaaaagaaattcagcATTGGTTAAAGGCTGA TTTTAATGGAGATAAAGTGCTGGACAAGAATGAGTTTTTGGCCTTTTATC ATCCGGAACATAACAAGAAAACAATTGAACTAATGGTTAAAGAAATGCTC TCATCCTTTGATAAAGATAACGACCATATCATAACATTAGAAGAATTCAC AGCATTACCCCCTGGGGAAGTCGACCCTGAAGAAGCTGATGAAGATAAGT TGTACCAAGAAGagaAAGCTAAAGAATTCAAAAGAGACATGGACTTGAAT AGCGATGGAAAGGTTGGCAAAGAAGAGCTTATGCAATATTTAGATCCTCG AAACAAAGAACACGCTGTAAAGGAGGCAGAATTCCTTATAAGATCTTCAG ATAGAAATAGAGATGGTAAAATTAGTGAACATGAAATGCTAATGAGCTAT AGTATCTTTACTGGTAGTAGTTTAACGAACTTCGCTCAAGTGCTACATGA TGAGTTTTAAATGATGATAAGGAAGGTAtcaatattttgttgttttttat atttgattggtTTTGGCTATTCACTtcccattttgaaaaatgcaacaaga gaagaaatcaaaaggaaagaTCTTCTTCCACCTGATCATATTGCTGGTGC ACATATGGAACAAGATGGACACATAAATAAGGATTATCATCGGGAAGTAT TCTTAGGTAAGCTTGTTAAAGAAGGAGTTTTGGTATGGGAGAATATGGCT GGTTACAAGAAGTTGATCAAAGTCTTTGATGAAGTTGATAAAAGTAATGA TAGACAAATTGATAAAGAGGAGATGAAGAATTGGATTCATGACAGAATCA TGGAGCATTATAATGCAGCAACAGAAGAAAGCAATAAGATTTTTGGAAAG GTAGATCATGATCAAAATGGATTAGTGGCATGGCCAGAATACAAAGCACA AATTCTTGGTCTGAACCCTAAAGATTATGAAAAAGACAATCTGACAGTGA TTGAAGACAAGTCTGgtcaatttgaaaaagaaattcagcATTGGTTAAAG GCTGATTTTAATGGAGATAAAGTGCTGGACAAGAATGAGTTTTTGGCCTT TTATCATCCGGAACATAACAAGAAAACAATTGAACTAATGGTTAAAGAAA TGCTCTCATCCTTTGATAAAGATAACGACCATATCATAACATTAGAAGAA TTCACAGCATTACCCCCTGGGGAAGTCGACCCTGAAGAAGCTGATGAAGA TAAGTTGTACCAAGAAGagaAAGCTAAAGAATTCAAAAGAGACATGGACT TGAATAGCGATGGAAAGGTTGGCAAAGAAGAGCTTATGCAATATTTAGAT CCTCGAAACAAAGAACACGCTGTAAAGGAGGCAGAATTCCTTATAAGATC TTCAGATAGAAATAGAGATGGTAAAATTAGTGAACATGAAATGCTAATGA GCTATAGTATCTTTACTGGTAGTAGTTTAACGAACTTCGCTCAAGTGCTA CATGATGAGTTTTAAATGATGATAAGGAAGGTAtcaatattttgttgttt tttatatttgattggtTTTGGCTATTCACTtcccattttgaaaaatgcaa caagagaagaaatcaaaaggaaagaTCTTCTTCCACCTGATCATATTGCT GGTGCACATATGGAACAAGATGGACACATAAATAAGGATTATCATCGGGA AGTATTCTTAGGTAAGCTTGTTAAAGAAGGAGTTTTGGTATGGGAGAATA TGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATGAAGTTGATAAAAGT AATGATAGACAAATTGATAAAGAGGAGATGAAGAATTGGATTCATGACAG AATCATGGAGCATTATAATGCAGCAACAGAAGAAAGCAATAAGATTTTTG GAAAGGTAGATCATGATCAAAATGGATTAGTGGCATGGCCAGAATACAAA GCACAAATTCTTGGTCTGAACCCTAAAGATTATGAAAAAGACAATCTGAC AGTGATTGAAGACAAGTCTGgtcaatttgaaaaagaaattcagcATTGGT TAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACAAGAATGAGTTTTTG GCCTTTTATCATCCGGAACATAACAAGAAAACAATTGAACTAATGGTTAA AGAAATGCTCTCATCCTTTGATAAAGATAACGACCATATCATAACATTAG AAGAATTCACAGCATTACCCCCTGGGGAAGTCGACCCTGAAGAAGCTGAT GAAGATAAGTTGTACCAAGAAGagaAAGCTAAAGAATTCAAAAGAGACAT GGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGAGCTTATGCAATATT TAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGGCAGAATTCCTTATA AGATCTTCAGATAGAAATAGAGATGGTAAAATTAGTGAACATGAAATGCT AATGAGCTATAGTATCTTTACTGGTAGTAGTTTAACGAACTTCGCTCAAG TGCTACATGATGAGTTTTAAATGATGATAAGGAAGGTAtcaatattttgt tgttttttatatttgattggtTTTGGCTATTCACTtcccattttgaaaaa tgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCACCTGATCATA TTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAGGATTATCAT CGGGAAGTATTCTTAGGTAAGCTTGTTAAAGAAGGAGTTTTGGTATGGGA GAATATGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATGAAGTTGATA AAAGTAATGATAGACAAATTGATAAAGAGGAGATGAAGAATTGGATTCAT GACAGAATCATGGAGCATTATAATGCAGCAACAGAAGAAAGCAATAAGAT TTTTGGAAAGGTAGATCATGATCAAAATGGATTAGTGGCATGGCCAGAAT ACAAAGCACAAATTCTTGGTCTGAACCCTAAAGATTATGAAAAAGACAAT CTGACAGTGATTGAAGACAAGTCTGgtcaatttgaaaaagaaattcagcA TTGGTTAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACAAGAATGAGT TTTTGGCCTTTTATCATCCGGAACATAACAAGAAAACAATTGAACTAATG GTTAAAGAAATGCTCTCATCCTTTGATAAAGATAACGACCATATCATAAC ATTAGAAGAATTCACAGCATTACCCCCTGGGGAAGTCGACCCTGAAGAAG CTGATGAAGATAAGTTGTACCAAGAAGagaAAGCTAAAGAATTCAAAAGA GACATGGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGAGCTTATGCA ATATTTAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGGCAGAATTCC TTATAAGATCTTCAGATAGAAATAGAGATGGTAAAATTAGTGAACATGAA ATGCTAATGAGCTATAGTATCTTTACTGGTAGTAGTTTAACGAACTTCGC TCAAGTGCTACATGATGAGTTTTAAATGATGATAAGGAAGGTAtcaatat tttgttgttttttatatttgattggtTTTGGCTATTCACTtcccattttg aaaaatgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCACCTGA TCATATTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAGGATT ATCATCGGGAAGTATTCTTAGGTAAGCTTGTTAAAGAAGGAGTTTTGGTA TGGGAGAATATGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATGAAGT TGATAAAAGTAATGATAGACAAATTGATAAAGAGGAGATGAAGAATTGGA TTCATGACAGAATCATGGAGCATTATAATGCAGCAACAGAAGAAAGCAAT AAGATTTTTGGAAAGGTAGATCATGATCAAAATGGATTAGTGGCATGGCC AGAATACAAAGCACAAATTCTTGGTCTGAACCCTAAAGATTATGAAAAAG ACAATCTGACAGTGATTGAAGACAAGTCTGgtcaatttgaaaaagaaatt cagcATTGGTTAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACAAGAA TGAGTTTTTGGCCTTTTATCATCCGGAACATAACAAGAAAACAATTGAAC TAATGGTTAAAGAAATGCTCTCATCCTTTGATAAAGATAACGACCATATC ATAACATTAGAAGAATTCACAGCATTACCCCCTGGGGAAGTCGACCCTGA AGAAGCTGATGAAGATAAGTTGTACCAAGAAGagaAAGCTAAAGAATTCA AAAGAGACATGGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGAGCTT ATGCAATATTTAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGGCAGA ATTCCTTATAAGATCTTCAGATAGAAATAGAGATGGTAAAATTAGTGAAC ATGAAATGCTAATGAGCTATAGTATCTTTACTGGTAGTAGTTTAACGAAC TTCGCTCAAGTGCTACATGATGAGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00059114-exon-scaffold_318-1491911889:2816..3139 | TCONS_00059114-exon-scaffold_318-1491911889:2816..3139 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:2816..3139 | TCONS_00059114-exon-scaffold_318-1510915933:2816..3139 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:2816..3139 | TCONS_00059114-exon-scaffold_318-1575043694:2816..3139 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1491911889:6948..7086 | TCONS_00059114-exon-scaffold_318-1491911889:6948..7086 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:6948..7086 | TCONS_00059114-exon-scaffold_318-1510915933:6948..7086 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:6948..7086 | TCONS_00059114-exon-scaffold_318-1575043694:6948..7086 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1491911889:8513..8664 | TCONS_00059114-exon-scaffold_318-1491911889:8513..8664 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:8513..8664 | TCONS_00059114-exon-scaffold_318-1510915933:8513..8664 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:8513..8664 | TCONS_00059114-exon-scaffold_318-1575043694:8513..8664 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1491911889:8880..9064 | TCONS_00059114-exon-scaffold_318-1491911889:8880..9064 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:8880..9064 | TCONS_00059114-exon-scaffold_318-1510915933:8880..9064 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:8880..9064 | TCONS_00059114-exon-scaffold_318-1575043694:8880..9064 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1491911889:9474..9559 | TCONS_00059114-exon-scaffold_318-1491911889:9474..9559 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:9474..9559 | TCONS_00059114-exon-scaffold_318-1510915933:9474..9559 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:9474..9559 | TCONS_00059114-exon-scaffold_318-1575043694:9474..9559 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1491911889:10664..12931 | TCONS_00059114-exon-scaffold_318-1491911889:10664..12931 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1510915933:10664..12931 | TCONS_00059114-exon-scaffold_318-1510915933:10664..12931 | Clytia hemisphaerica | exon |
TCONS_00059114-exon-scaffold_318-1575043694:10664..12931 | TCONS_00059114-exon-scaffold_318-1575043694:10664..12931 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_318 | supercontig | scaffold_318:2816..12931 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005509 |
calcium ion binding |
Blast
BLAST of TCONS_00059114 vs. Swiss-Prot (Human)
Match: CAB45 (45 kDa calcium-binding protein OS=Homo sapiens GN=SDF4 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 4.630e-57 Identity = 122/347 (35.16%), Postives = 197/347 (56.77%), Query Frame = 3
Query: 144 VSIFCCFLYLIGF-----GYSLPILKNATREEIKRKD---LLPPDHIAGAHMEQDGHINKDYHREVFLGKLVKEGVLVWENMAGYKKLIKVFDEVDKSNDRQIDKEEMKNWIHDRIMEHYNAATEESNKIFGKVDHDQNGLVAWPEYKAQIL---GLNPKDYE-----KDNLTVIEDKSGQFEKEIQHWLKADFN-GDKVLDKNEFLAFYHPEHNKKTIELMVKEMLSSFDKDNDHIITLEEFTALPPGEVDPEEA-DEDKLYQEEKAKEFKRDMDLNSDGKVGKEELMQYLDPRNKEHAVKEAEFLIRSSDRNRDGKISEHEMLMSYSIFTGSSLTNFAQVLHDEF 1130
+ + C L+L+G + P ++TRE + ++ +LPPDH+ G +E DGH+N+ +H+EVFLGK + E +KL+ +F +VD + DR+I +EM+ WI ++ EH+ A EES F VD D +G V+W EYK + L G + K+ + L V E+ E W +AD D +L + EFL+F HPEH++ + MVKE++ D+D D +++ EF +LP G V+ ++ D D + +++ KEF+ +D N DG V EEL Y+DP N+ +A+ EA+ +I +D N++ + E+L FTGS L ++A+ +H+EF
Sbjct: 16 IGLAPCCLWLLGAVLLMDASARPANHSSTRERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVLKYSEFFTGSKLVDYARSVHEEF 362
The following BLAST results are available for this feature:
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