TCONS_00059105 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059105
Unique NameTCONS_00059105
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059105 ID=TCONS_00059105|Name=TCONS_00059105|organism=Clytia hemisphaerica|type=transcript|length=165bp
GGAGAAAAAAGAAGGCCCTTGTCAGAcaataacatttttaggcatAGAAA
TAGATACTCTGAACAGGTGTTGTCGATTACCagacaaaaagttaaaagat
tTGTTAGGTAAGCTACAAGGCTGGAATAACGCTTCTCAGACTTCAAAGCG
AGAGTTGCTCTCGTT
Run BLAST on NCBI

transcript from alignment at scaffold_316:320150..320314

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059105 ID=TCONS_00059105|Name=TCONS_00059105|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at scaffold_316:320150..320314 (Clytia hemisphaerica)
AACGAGAGCAACTCTCGCTTTGAAGTCTGAGAAGCGTTATTCCAGCCTTG
TAGCTTACCTAACAaatcttttaactttttgtctGGTAATCGACAACACC
TGTTCAGAGTATCTATTTCTatgcctaaaaatgttattgTCTGACAAGGG
CCTTCTTTTTTCTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037224XLOC_037224Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059105-exon-scaffold_316-1491911889:320150..320314TCONS_00059105-exon-scaffold_316-1491911889:320150..320314Clytia hemisphaericaexon
TCONS_00059105-exon-scaffold_316-1510915933:320150..320314TCONS_00059105-exon-scaffold_316-1510915933:320150..320314Clytia hemisphaericaexon
TCONS_00059105-exon-scaffold_316-1575043694:320150..320314TCONS_00059105-exon-scaffold_316-1575043694:320150..320314Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_316supercontigscaffold_316:320150..320314 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059105 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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