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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059091 ID=TCONS_00059091|Name=TCONS_00059091|organism=Clytia hemisphaerica|type=transcript|length=1432bp
TATCATTGCTATTGGTGAACAAGAAAGGTTTGCGTGTGAACTAAATTCAT
AAATGGCTTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAA
AGCCTTCAACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTT
GAGCTCCTTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGATC
TAACAAATCAAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGT
TCAGGTCCACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAA
AAGACAAAACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTA
TCCAGTTATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCA
GATTTAAAGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGA
AAATAAAGCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGA
AATCGAAGAAAGCTACATTCGAGGGTCACGTGTCAAACCACGTGCTTGat
gaacaacaacaacaacaactactaTCGAATGTTTCTTCAAATGCCGCCAA
ATCACGATTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAA
AACGACGTGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGC
CGTGCAGGAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGA
TTATGTTTTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCAC
AACGTTATAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAA
AGAGATAAAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGA
TTATGaagatttcatcaaaatgagTCAACCGGAAGTTATACGTAAATCAT
CTGCGGAGCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGT
GAACCAGTTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGC
GAGCGCTTTGGGAGAGGTAGAGACTGTCATAATGGATTCTAATCTATCTT
CACCGGAACGAACAATAAGAACATCCTtacaaaattcaacaaagtaaatt
aattttttagagctatatttattttttaaagtgtGCCTCCAAATTgtgta
tattttgattttatttttaaattggtGTGCTTATATAAAGTTATGTCTAT
AGGTCTCCCTTaaagatttgaaagatttgGATGTTCAGATATATGCACGT
TTCTCTATAAGAATAaattgtataagaacataaggcttcgattgccaaaa
tgctaagaacaagctaagaacatctcaaggctttacggactcgaaaacac
tcaattttttaggaaaaacggttaaaaatagt Run BLAST on NCBI protein sequence of TCONS_00059091-protein >TCONS_00059091-protein ID=TCONS_00059091-protein|Name=TCONS_00059091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
MACEVYPDQTQQQKIQSLQHSIAFLQSQHATTLSSLHQEIERLQKKCKDL
TNQVTLSVPSSEVVPCSGPQIRRDLEDEIKTTKRQNRDLLQQSQNKDKRI
QLLEGQLRSKEQKYHADLKNIQRRIAELEHELENKANTIVYLTSTIQQKK
SKKATFEGHVSNHVLDEQQQQQLLSNVSSNAAKSRFSPTPPPPIVMGQTK
RRDYNLRRSGVSPSPSRAGIIQDGSSHPMLGSDYVLQNTLPKTNSTRISQ
RYSKQSNLEHSKSNTKRDKEFKLANHTRPKPPDYEDFIKMSQPEVIRKSS
AEPLPPITTRSGRQLREPVQTRSRVHRHVRPTASALGEVETVIMDSNLSS
PERTIRTSLQNSTK Run BLAST on NCBI transcript from alignment at scaffold_316:300601..309329- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059091 ID=TCONS_00059091|Name=TCONS_00059091|organism=Clytia hemisphaerica|type=transcript|length=8729bp|location=Sequence derived from alignment at scaffold_316:300601..309329- (Clytia hemisphaerica)
TATCATTGCTATTGGTGAACAAGAAAGGTTTGCGGTCAGTATTTACCAGA
GCAATTATCATGTCCATCAGCAAAAATCAAAAAGTGGTATAAGTGACTCT
GAGTATGAGATTGATTCATGATATGTACCACTGCAACACTGATGACATTC
AGTTAGTCACACTAGCGTCCCGCCAAAATGCGTATAAAAAATTAATGGTG
TGAAAGAGCTGTATCGTTTACTTGACTTGCAAGCAAAAAAATGTGCCGCA
AAACTTCCAAAGTGATTCATGAAAAAAAAACCCGGCGCTTTTTAATGAAA
TCGACATTTCCAACCCCCCCCGCTTATTAATTTTTGGGAAAATGTTTTTG
AAAGTTCCCTCTTTTGTCCCAATTCACAGTGGCGTTGTGGGAAAATTTTT
CTGGAGGGGCCAAAGTCAATTTTTTTAAAATGGCGCCCCCCCCCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAAGCTTTGAAATTTT
TTCCAACCCCCCGCTTATTCCAATCCCCCCGGCTATTAGGTACCCGAGAG
TATATCTTGGAAACTTGAACTTGATTCAGGTAACTCTCATCCTTGTTGTT
GCGAATACATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATT
TCCTAGTGTGACTAACTGACAATCAATCCAGCCCTGACTGGTTGCGGTAA
AATGACATAATGTCACAGGACATCACATGGGTGCATATCCTGAATCTCAT
AGTAGCCTTAATTCCAAATATATAACATATGCTGATTCTTCTTTAGTGTG
AACTAAATTCATAAATGGCTTGTGAGGTGTATCCTGACCAAACACAACAA
CAAAAGATCCAAAGCCTTCAACATTCCATTGCATTCTTACAATCACAACA
CGCAACAACTTTGAGCTCCTTGCATCAAGAGATCGAAAGGCTACAGAAGA
AATGCAAAGGTACATCCTTTTTTAAAAAAAGCAAAATATTTTGTGTTTCT
ATGATAATATTGTTATAGTTAACTTACTAACTACCACAATTCGGACATCC
CCCTTCTTAAGCTTGAAAATTTTCCTCATAAGCAGGGAATTGTGATTGTT
TACCTTTTAAATCCGAGTGACTTTGTGCGACTAGCAATAACTCATTTAAA
GCAATTTGAAAAACAATTAAAGTCTAATATGTGAGTAGATAAGATCAATT
AAAACTGAGTGGAGAGTATTTTTCAAACTGAAAATATACGAAAACTGTAA
TGTCTTAATGTTTCATTTAATTTCTGAATTTTGTGGCTCCAATTGGCTTG
ATTTGCTCTTCTGTAAATGTGTGTTTACATTAGGACTAAAACTGTAGGAC
TTACAAACTTTTTCAAATTTATCTGAACATATTGTATTCCCAGGTGCCTA
GTAAGGCCTATCCCCCCACTTGTTAATTTTTCAATTTTTTCCAACCCCTT
GACCTTATTATAGGACACCCCCCTCCCGTTTTTTAATTTTGAGACCAATT
TCAGTTGTCAAAGTCTCTTATTTATCTCTAAATAGGCAGGTTTTGGTCTA
TAATTATGTCTCCTTCTTGGGTATTTAGAGGTATGATTTCCAACCACCCC
TCCCTCACTTATTGAAATTTGCAAATTTTCCCAACCCCCGTTTATTCTGA
CCCCCCCCTCCCCCATTTATTTGGCACCTGAGAGTATGTTCCTTTTGACA
GCTAATTTGTTGTGTTTTTTTTTTCAAGTCAAAATTTTCTTGTTGATCTT
CAATGTCTTCAAACCTATTTACAGTATAAAAGTTTGTGTTCTTCTAAGCC
AACAAGGTTGTTGTATTGCATAACCTTAATCCTTTTAAATTTTCACTGAT
TTATTTTTAGATCTAACAAATCAAGTAACACTATCAGTACCCTCGTCTGA
AGTTGTACCTTGTTCAGGTTTGTTCATTTTTGTTAGATTCTATTTAAAAG
CCTCTCTTAGTAGAGAGCAAACCCTGATGATCCTTAGCATCTTTGTTGGA
CGCAACTGCATGTGATTGGGTCAATAAAGATATGATTTTTAAATTTCAAT
TAAGTTTTTGAGGGGGCCTGCGAATTAGGCCTGGCAAAATTTTTTATAGC
CAAAAAAACTGACGCTGTAGGCAAAACTCCTAAACCCATAAAAAAGGGAA
AAAATTGACGATTTTTCAAAGTTGAATTAAACGAAAATGATTAATACCAT
CGGATAGAGCATGAAATTTTGAGCAAAAAATTGTACTACAACAAGTCTAA
AACGTAACAGATCTGTTTTCCATCAAAAGATGTTATGGTTCATAAACGTT
GGCCCTCTACTACCTTACCTTTTTATCAGACTTTTATCGTCAACATGAAA
ATATGAGCAATCTAATTGGCTTAAAAAACGCGTTCATAAATGCTGTATTT
CATATTTTACCGTACAAATACAAGACTGCGTTCAAAATAGGGGTCTGGTA
AGCGAGAGATCAATTTTGTACACTATCCTCAAATGTTTTCTTTTCATTCA
TAATAGAATAATACACAACATGTTTCAAAAGAGTTATGAAAAGAATGTTT
TCATCTTTTTTTATGACCGTTCAATATTGTACTCTGTACTGTGTGATAAC
TATATAACTATTACTTATCGTCCCAATTGAACAATTGCGCCTTTACAATT
ACAGTATGTGGCCCCCAAAACGTCTATGCAAATTGAAATCTTTCTAGTGA
ATTCAGAAAATATCCCTATGTTAAAAATCATTCTTGTGAATTAAGCTTCA
ACATGTCTAGTTTCTTTCCCCAATTGTTGGTTTGCCGTCACCCGACCGAC
CCTACCTCGAAACCTGCCGACCCAAAAAATTTTATTGCCATTTTAAAGAA
GATTTTTCCTTCAAAAACTTCAAACAATAAAAAATCAAAACTCGTATCTT
GTTTGTCTCAAGTGGAAGAATCATAAATTCCCTGCTAGCACTTCTGTTTT
TTATTCAAAATTACCTAAATGTAAACAAACTGTTAACCGTCGCCAAAATA
AAAAAAATTCCGACCGATCGACCCACCTCCAAAACTTAGGGTCGGGTGAA
GGCAAACCAACAATTTTTTAAGCCCAGCCCGACATCAAATCATAGCACCG
ACATCAAATTACTATCAATTGGTATGAAGGCAATGCTTTACGACTTAAAA
AAGTCAAAATTTACTTTTCTGTTTATCTTCATTACAAATGGTTGTTAAAA
ACGGAGGTTAGTGGCCTCCAAAACGTCGATTCAATTAAATTGAAATAGAC
CTTATCGGATTTTTTTATATTAAAAAAAAACGATGCATTGTGGGATTGTT
TCGAGTGTATTACAATAGAAATCACTTAGGAATTCCTGGAGGGAATTCTA
TTGTAATACACTCGAAACAATCCCACGATGCATCGCTTTTTTAGAAAAAT
CAAAAACTCTGATAAGGTCTATTGTTAGAAATCCATCACTTAAACATGTC
TCGAATTAATGACACGATAAAATAATTACAAAAAAAATAATTAGTTTTTT
ATCATTTTGAAAAAAAATCATACCAAAACAATAAGTTTTTCAGGCTTGAC
TGAGTGTAAAATCCCGCGCAAAATATAATCGTGAAATATTTCGAATTTTC
TGAAAAACTTTGAATTACTGAGTTGGTATGTCGGTATATGTTTATACTTT
CCAGAGTTTTTCAGGGGTTAATTTTCAATCTTGTTTGACTTTTGACGGTT
TGGTCCAAAAAAGGGATTTTCGAAAATAATTTTTGAAAAAAAAGAAGAAA
AAAATTAGCCATGTTAAAAATGACATTTTTGTATTTTATTTTTTTTTCGG
ACTTAAGAGAAATGTGTTAGGATCAAATCTGAAGCCAAGTTTAAAGTACA
AACATGGCTTATTAAGGCAAAACCTCCGTTTTGGGGGTTGTCTCCGTTTT
GGTGGCCATATACTGTATAACATTTCTTCAATTGGGAACGCTCAACCGTT
ATTGAAAAATAGTTAATTTAAAGCTTCAAAGGATCATCTTTGCCAAATTT
CTTGATGTTACCACGATCTTATGTTTTTATATGATAAAAGACCTCACTAA
ATGTGCTCTTATCTAGCTTAATTTTTTTGTGCATCATTTGAATTTAAAAT
CAGCCGAGTTGAGTACAGTTCAAATTCAAGATAATACATGTTTTTTTTTT
ATAAGCATAACGTTCATAAGCATACCAATACCTGAATTTGTCTAAAAAAT
AAGCATATTACAAGCATATTACTGAGCTTGCTTTTGAGGTGTGTAAGTGA
AAATGTTTAATACAGTACACAGCCTGCATTAAATTAACAAAAAGTTTCTT
CAAACGGCATTTTAATTTTAAAAAATTACAAGCGTAAACGCGGCAATCGC
TCACAACTTTCCTGAAACTGCTTATAAATCAAGCTATGTATAGCAACGAC
AGATTTTGAAAAAATTGGAGAATCGAATTTTCGGAAAAATAAGCATATTA
CAAGCATATTACTGAGCTTGCTTTTGAGGTGTGTAAGTGAAAATGTTTAA
TACAGTACACAGCCTGCATTAAATTAACAAAAAGTTTCTTCAAACGGCAT
TTTAATTTTAAAAAATTACAAGCGTAAACGCGGCAATCGCTCACAACTTT
CCTGAAAAATCTTATAAATATCCTCATGTATAGCAACGACAGATTTTGAA
AAAATTGGAGAATCGAATTTTCGGTAAAATAAGCATATGATAAACATACT
TCGAGCCTGAGCCTAAAATATCTGTAAGCATAACTAAGCTTGTTTCCCAA
AAAACATATGCTTATAAAAAAAAACATGTAGACCTTCTATGGACCTTTAA
TTTTTTAAACAACAACTCGAAATTTTGTCACCTGGCTTTGTCACATGACG
TCATCAGGTGGCTGAGTAAAAATTATAAATGGTTCGAAAGTATTCAAAAC
ACAATAGCCCAAGCGGAGAGATCATGATCTGATGAAAATTGAGGTATAAA
ACGTATGATAAGAAATTTGTAGTACTAGGCGAAACCAAATTAATTTATTG
TTCTACGACACCCCCTTCTCACAGACCCACTGGAAATATTGGCCAAAATA
TCGTCCCCAGTGGAAAGATACCCTCAAATTTTTGTCCCCGCTGGAAATGA
TCAGATAAGCAAATCTGCACTGCAAAATATTGTGCTATTTTCCCATCCCC
ACTGAATTTTCTGGCTAGAAAACAATGAAATTAAAATCCCCGGCCATAAA
AAACATAGGAATATAAATCACCTTCGAGTTTTGGTCCGTTATTTTTAATA
CCCCCGCTGGCTGATGAAATCCCACCGGGTCTGTGAGAAGGGGGTGTTCT
ACAGGACCGATCTATCCAGACCTACCCTGTTTTTTCCAAAATTCGAAAAA
TAATAATATTGAATTAGCAAAGCTGGAGGATGAACTTTATAATTTTTTTG
TGGATCTTTTTAATTGAACAAGTTGAAAAAGTGTAAATTGATCCCAGAAC
TTAGATGAATTTAAATGATCACAATGGAAATGGCACAAAAGTCGCTCATC
GATAAATAGGAAAAAATCTACTGCTTCAAAACCTAACAAATTTCACAGAT
CTTGACCTTCCGACCCTAGATTTTAAGAAAACACTTTAAAGAAATCACTT
TTAGGATCAATTTATTTTTACTGCTGGGTGCACCAAAAAAAAGTATACAA
CTTTGTCGAGATGTTGTGAGATTCAGAATTCATATTTTTTTTTTTCATTC
TTTTTTTATGGCATAGAGGATGCTCTAACTTGAATTTTGAGCTATCATAC
ATACAGGTTCGAAAAAGTAAAAAAACTGACTTTTTTTTACTGTCGAAATT
TCAAAAAATCATTAAAAACAGCGAGCAAACTTTTCTATTGACACTTACGT
TCGTTACACATAAAAATACCAAAAAAACACAACTGTGTTCATCAAAACTC
GTTACGGAATTTAAGAATATGGTAAAACAAGCCCCATGTGGAATAATACT
TTTTGAAAAGCTGAAAAAATTTTTTTGCAAATCTCCAAGAGAGGTTTTGA
TGTTATGTGTGTGCTATGTGAGAAAATTTTTGAAAAAATAGATCACCGTT
CCTCGACTAGTTACTCAAAAAACTTGGGTCTGCATTGAGTTTGCTGGTGT
GGGAAATGTTCATGACGTGCAAATAAGATGGACAAACTGTTGGCAAAATA
TAAGATAAGAGAAAAAAGAATTTAAAAAAAAATGAAATTGTGTTTTTGTC
ATTTTGTCTTATTTATAGCATCATAGCTTTTTTTTGATGCACCCGGTATA
CCAACTGACCGACCAACCGACCGACCAACCAACCGACCAACTTATATTTT
TTTTTATCATTGCTGATCGATAAATTTCCTATAAGCAGATTCATGTAAAA
AAGTTACAAAAAGGGTCGAGAAAAGCTCTGATCGAAGGAAAGTGGAGATT
ACCTCATGCGCACAAATAGGAAAAACATGTTTAGGTGTGAAATTTTCAGC
CAATCAGAGCTTTACTCGACGTTTGTTCGTGACTTTTTTACATGAATCTG
CTAATAGGAAATTCGTGTATTCTCGGTAACATATACTTTTCCTTTTCACA
GGTCCACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAG
ACAAAACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCC
AGTTATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGAT
TTAAAGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAA
TAAAGCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGAAAT
CGAAGAAAGCTACATTCGAGGGTCACGTGTCAAACCACGTGCTTGATGAA
CAACAACAACAACAACTACTATCGAATGTTTCTTCAAATGCCGCCAAATC
ACGATTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAAC
GACGTGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGT
GCAGGAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTA
TGTTTTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCACAAC
GTTATAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGA
GATAAAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTA
TGAAGATTTCATCAAAATGAGTCAACCGGAAGTTATACGTAAATCATCTG
CGGAGCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAA
CCAGTTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAG
CGCTTTGGGAGAGGTAGAGACTGTCATAATGGATTCTAATCTATCTTCAC
CGGAACGAACAATAAGAACATCCTTACAAAATTCAACAAAGTAAATTAAT
TTTTTAGAGCTATATTTATTTTTTAAAGTGTGCCTCCAAATTGTGTATAT
TTTGATTTTATTTTTAAATTGGTGTGCTTATATAAAGTTATGTCTATAGG
TCTCCCTTAAAGATTTGAAAGATTTGGATGTTCAGATATATGCACGTTTC
TCTATAAGAATAAATTGTATAAGAACATAAGGCTTCGATTGCCAAAATGC
TAAGAACAAGCTAAGAACATCTCAAGGCTTTACGGACTCGAAAACACTCA
ATTTTTTAGGAAAAACGGTTAAAAATAGT Coding sequence (CDS) from alignment at scaffold_316:300601..309329- >TCONS_00059091 ID=TCONS_00059091|Name=TCONS_00059091|organism=Clytia hemisphaerica|type=CDS|length=3285bp|location=Sequence derived from alignment at scaffold_316:300601..309329- (Clytia hemisphaerica)
GTCCACAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAGA
CAAAACAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCCA
GTTATTAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGATT
TAAAGAATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAAT
AAAGCGAACACGATTGTATATTTGACTTCTACTATACAACAAAAGAAATC
GAAGAAAGCTACATTCGAGGGTCACGTGTCAAACCACGTGCTTGATGAAC
AACAACAACAACAACTACTATCGAATGTTTCTTCAAATGCCGCCAAATCA
CGATTCAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAACG
ACGTGATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGTG
CAGGAATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTAT
GTTTTACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCACAACG
TTATAGTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGAG
ATAAAGAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTAT
GAAGATTTCATCAAAATGAGTCAACCGGAAGTTATACGTAAATCATCTGC
GGAGCCTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAAC
CAGTTCAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAGC
GCTTTGGGAGAGGTAGAGACTGTCATAATGGATTCTAATCTATCTTCACC
GGAACGAACAATAAGAACATCCTTACAAAATTCAACAAAGTAAATCTAAC
AAATCAAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGTTCAG
ATGGCTTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAG
CCTTCAACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTTGA
GCTCCTTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGGTCCA
CAAATCAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAGACAAAA
CAGAGATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCCAGTTAT
TAGAGGGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGATTTAAAG
AATATTCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAATAAAGC
GAACACGATTGTATATTTGACTTCTACTATACAACAAAAGAAATCGAAGA
AAGCTACATTCGAGGGTCACGTGTCAAACCACGTGCTTGATGAACAACAA
CAACAACAACTACTATCGAATGTTTCTTCAAATGCCGCCAAATCACGATT
CAGCCCCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAACGACGTG
ATTATAACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGTGCAGGA
ATAATTCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTATGTTTT
ACAGAATACGTTACCCAAAACGAATTCTACGCGTATTTCACAACGTTATA
GTAAACAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGAGATAAA
GAATTTAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTATGAAGA
TTTCATCAAAATGAGTCAACCGGAAGTTATACGTAAATCATCTGCGGAGC
CTTTACCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAACCAGTT
CAAACGCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAGCGCTTT
GGGAGAGGTAGAGACTGTCATAATGGATTCTAATCTATCTTCACCGGAAC
GAACAATAAGAACATCCTTACAAAATTCAACAAAGTAAATCTAACAAATC
AAGTAACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGTTCAGATGGC
TTGTGAGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAGCCTTC
AACATTCCATTGCATTCTTACAATCACAACACGCAACAACTTTGAGCTCC
TTGCATCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAGGTCCACAAAT
CAGAAGGGACTTGGAGGATGAGATCAAAACAACCAAAAGACAAAACAGAG
ATTTGTTGCAACAATCACAAAACAAAGATAAACGTATCCAGTTATTAGAG
GGTCAACTTCGAAGTAAAGAACAAAAATATCATGCAGATTTAAAGAATAT
TCAAAGGCGTATCGCGGAGCTTGAACATGAGCTCGAAAATAAAGCGAACA
CGATTGTATATTTGACTTCTACTATACAACAAAAGAAATCGAAGAAAGCT
ACATTCGAGGGTCACGTGTCAAACCACGTGCTTGATGAACAACAACAACA
ACAACTACTATCGAATGTTTCTTCAAATGCCGCCAAATCACGATTCAGCC
CCACTCCCCCACCACCCATAGTGATGGGCCAAACAAAACGACGTGATTAT
AACCTACGACGGAGTGGTGTCTCTCCTTCACCAAGCCGTGCAGGAATAAT
TCAAGATGGTAGCTCACATCCAATGTTAGGTTCAGATTATGTTTTACAGA
ATACGTTACCCAAAACGAATTCTACGCGTATTTCACAACGTTATAGTAAA
CAATCGAATTTAGAACATTCAAAATCTAACACTAAAAGAGATAAAGAATT
TAAATTGGCAAATCATACGAGACCCAAACCTCCGGATTATGAAGATTTCA
TCAAAATGAGTCAACCGGAAGTTATACGTAAATCATCTGCGGAGCCTTTA
CCTCCAATTACCACTCGAAGTGGTCGTCAATTGCGTGAACCAGTTCAAAC
GCGTAGCCGCGTGCATCGCCACGTGCGCCCAACTGCGAGCGCTTTGGGAG
AGGTAGAGACTGTCATAATGGATTCTAATCTATCTTCACCGGAACGAACA
ATAAGAACATCCTTACAAAATTCAACAAAGTAAATCTAACAAATCAAGTA
ACACTATCAGTACCCTCGTCTGAAGTTGTACCTTGTTCAGATGGCTTGTG
AGGTGTATCCTGACCAAACACAACAACAAAAGATCCAAAGCCTTCAACAT
TCCATTGCATTCTTACAATCACAACACGCAACAACTTTGAGCTCCTTGCA
TCAAGAGATCGAAAGGCTACAGAAGAAATGCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059091-exon-scaffold_316-1575043694:309296..309329 | TCONS_00059091-exon-scaffold_316-1575043694:309296..309329 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1575043694:307371..307533 | TCONS_00059091-exon-scaffold_316-1575043694:307371..307533 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1575043694:306413..306469 | TCONS_00059091-exon-scaffold_316-1575043694:306413..306469 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1575043694:300601..301778 | TCONS_00059091-exon-scaffold_316-1575043694:300601..301778 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1510915933:309296..309329 | TCONS_00059091-exon-scaffold_316-1510915933:309296..309329 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1510915933:307371..307533 | TCONS_00059091-exon-scaffold_316-1510915933:307371..307533 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1510915933:306413..306469 | TCONS_00059091-exon-scaffold_316-1510915933:306413..306469 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1510915933:300601..301778 | TCONS_00059091-exon-scaffold_316-1510915933:300601..301778 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1491911889:309296..309329 | TCONS_00059091-exon-scaffold_316-1491911889:309296..309329 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1491911889:307371..307533 | TCONS_00059091-exon-scaffold_316-1491911889:307371..307533 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1491911889:306413..306469 | TCONS_00059091-exon-scaffold_316-1491911889:306413..306469 | Clytia hemisphaerica | exon |
| TCONS_00059091-exon-scaffold_316-1491911889:300601..301778 | TCONS_00059091-exon-scaffold_316-1491911889:300601..301778 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_316 | supercontig | scaffold_316:300601..309329 - |
Blast
BLAST of TCONS_00059091 vs. Swiss-Prot (Human)
Match: CCD92 (Coiled-coil domain-containing protein 92 OS=Homo sapiens GN=CCDC92 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.231e-19 Identity = 54/153 (35.29%), Postives = 90/153 (58.82%), Query Frame = 2
Query: 86 QQKIQSLQHSIAFLQSQHATTLSSLHQEIERLQKKCKDLTNQVTLSVPSSEVV---PCSGPQIRR---DLEDEIKTTKRQNRDLLQQSQNKDKRIQLLEGQLRSKEQKYHADLKNIQRRIAELEHELENKANTIVYLTSTIQQKKSKKATFEG 526
+ ++ S Q ++ FLQ +HA+TL LH EI RLQ+ C DLT ++T V SSE ++++ +LE ++K + +N +LL++ + K+ I +LE ++ +E+KY +LK ++ L ELE +A+TI YLTS + K K + G
Sbjct: 24 ENQLHSAQKNLLFLQREHASTLKGLHSEIRRLQQHCTDLTYELT--VKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKEREKKYLEELKAKSHKLTLLSSELEQRASTIAYLTSQLHAAKKKLMSSSG 174
The following BLAST results are available for this feature:
|
