TCONS_00059083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059083
Unique NameTCONS_00059083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1563

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059083 ID=TCONS_00059083|Name=TCONS_00059083|organism=Clytia hemisphaerica|type=transcript|length=1563bp
GAAACCGGTAACTTACAAATACAACATGTGGCCATACAATTGTCCACAAT
TCTCCAAAGGTTGCACAGAATTTAGTTACGAGACACCAAATAATTACGCG
TGGAATAGTGTTGACCGATATATTTGTGATACTGGAAAAGATTTCAACGA
AGTTCGAGACATCTTGGAGATCATGAAATATTGGAGAAGTCGTTTTCTTC
TTCTACCCGTCAAAAAAACCGATTTAAACCCGACCGTCAAAGAAGACAAG
CGTACACACCACGCCGATCATATGTTAAAAATCGAAGGCTTTTTGCGGTT
CCTGGAAAATGTGAACAAGATTAAGAGGAATTACACCAGCAGACCACTCT
TCCAAACAAGGTCCAACTTGAAGAGACGGAAAGTATCGAACGAACGACGT
AATGCGACGCCAGAGCGCCCTGAACGTAAAGAGAGCCGAAGCAGCATAAG
CAGCAGTGACAAACGTACGTCGCCGATACAAATCGAAACTcaagaaaata
aagataaagaCAGCTCTGCTTCTAGtgCTTCACGTTCATCGTATACAAAT
GCATCATCCAACAAATTGCCACCGTCTGAAATGCCACCGGAACATATCCT
TTCCTTGCATTCACCACATCATGAGATCATCAAAGCCATGAAAAGTCAAG
AGTACGGATTGACATTTGTTCCGAAACAAGACCTTCTATGTGAGTACACT
TTCATTTCGGCCGAAGCGGTCGCATGGATGATGAAATCAATCGATGGCTG
TCACACTAAAGAAGATGCTCTAGTGCTAGGACAGGCAATGTTGGAAGCGA
AGGTGATTTTACACGCATCAGAGAGTTCAAGACAAACTTTTGCTGATGGA
TTCTATTTATACTTCATCAAACAGGAGAAAAAAGAAGAGGAGAGTGAGAA
ACGACGATTCTGGTTCAACCAAAAGCAAACAGAAGATGAAATGTTAGACT
TGTATAACATCAAATGGATTGAAGTAGCCGTGTGGAGAGATAAATACGTT
TCCGATAAATTCCTTCATGACCCATTACCACCCGATTTAACGTACAAATT
GAGGAAACCGTCAGACGGTGCCGTTTTCCGTTCATCTTCCATCCCGTTGT
ACAAGAAAATGGAATACAACCCAGACATCAACCAAAAGAGCTCTCGTTCA
GAATGGTGTGTGATTGCTTATAATGGAAATTATTATCCGAACCAAGCAGC
ATACGCATTGGAAGTCAATTGGCTTGTAGCTTCTGGTCCTATTATCGCTG
ATATGGTACAAAAATGGTCACATCGTGCTAGTTCGTGTGGTTTCCACCTG
GTGCCTGCTCCCATGTGTGTTTTCCCACGTCATTCCATACGATGCAGTAG
AAACCCGTTCCGTAAAAATCCATTCATCCCACTGAATTTGAAATGCTTGT
TGAAACCAGGTCAAGAAAGACTCTTTGATAATTACGACTCAAAGACTTGG
TCAAGACGCATGATTTACTTCCAAGAATCCATCTTATACAAGTATAAACA
TTTTCAGTTTCGTTCGTTCAAATGCACTCTATCTATGTATACACACACAA
ATAGATCTCAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_316:238838..252167-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059083 ID=TCONS_00059083|Name=TCONS_00059083|organism=Clytia hemisphaerica|type=transcript|length=13330bp|location=Sequence derived from alignment at scaffold_316:238838..252167- (Clytia hemisphaerica)
GAAACCGGTAACTTACAAGTAAGTTGTACCTTTTTTATGAGCATTGAAAT
TTGATTGTGAATCTAGCTGTACTTAAATTCATGCTTGGCTTTTGGAATGA
CGAGAACAGGTGAAATGCGCATACTTTATATATTATCGCAGGTACCAACC
AAACTTTTGGGTTTTCGCGGGTACCAAACTTTTTCTATGAGACGTGTTTC
GTGTGTACTAAATTATGCAATTGCCACTTTCTAAAATTTTTCGCGCGTGT
TAAATTTCGCGATTTACCAAATCTGTAAAACAATGGGAACCATATTTTAA
AGTTTTCATCTATGAAATTGAGCCTGGTTAAAAATTGTTTAATAAACACC
CTTTCTTAACACCATCCCCGAATAAATGTCCCTCCTAATGGCCTGTTCTA
TTAAAAAAACATACAGTGGGGTGGACGAACCTTTTCAAGTCAAAGAATAA
TTATTGAAAATGTATGGATCCCCCCCCCCCTGGGAAATAACAAAATTTGC
TAAAATACCCTTGGAAAGGTTCTAAGTGAGGGAGGACGAACTAAAATCAG
TCTTTTGGAAACCCCCTGGAAATTTTAAAATAACTTTACCCCCTTGGAAA
AATGGAAAAAGACCCTCTGGAAATTTTTCCCGGGTTACCCCCTGGAAATG
TTTGTCCACCTCCTGTATGGATATAAATGGAATGGCCAATTTAACCAAAA
AATAATAAACGCCAGGGACGTTATTCGAATTAATAATTCGAGGTATTCAG
TATACATAGTTGAAATTTTATGATTTGGCAATACTTAAGTTTTTCCGAAG
ATCTGATCCGAGTGTTATTGTATTACAACATGCGTAGAGTCAGACCAGCC
AGAGCAACCACAGATAGGGTACTGCCCCTTGCCAAGAACTTAAAACATTC
TATCTGGCATCCATGATTGCAAGACTTCCTTACTACGACAGTTTTTAGCA
AGTAGTTTTTAGTACAAGCGGCCTTAGCATGAACATTGAGCATCCAGCTA
CGACGCGCAAGGTCATTGGTTTAATCCCTTGTCGGGTCATACTAAAGACT
TCCTGCTTAGTACGAAGTACAAAGGAAGCGAAGGGCAAAGGGTAAAGTGG
AGCAATCCAGAGAGAAAGAGTGGCGTCCTACTCTTCGGTTTGATAGCTAT
CGAAAGAGGAGCCTTCGGATCGCCTCCGACTGCCATCGTAGACTTACTTA
CTTAATAATTTCTTACCTTTAGATACAACATGTGGCCATACAATTGTCCA
CAATTCTCCAAAGGTTGCACAGAATTTAGTTACGAGACACCAAATAATTA
CGCGTGGAATAGTGTTGACCGATATATTTGTGATACTGGAAAAGATTTCA
ACGAAGTTCGAGACATCTTGGAGGTATGAATGTAATACATGAAATCCATA
CAGGGGATGGAAAAATATTTGCAGGGGGTAATCTTAGGTCCCAAATAAAC
GGGGGCGGGGGTGGAAAATTTTCTAGATTTTAATAAACGGGGGTACCCTA
ATTGCCGGGGGGTTGGAAATTGTACTTCTGAAACCCAAAAATAAGGTAAA
ATTAGGCTAAAATCAGGCTATTTAGAGCAAAATAAGAGGCCTTCTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAAAGGGGGGGGGGGGGGGGGGGGTTGGAAAATTTTCGAAAAATTA
ACAACCCCCCGCTTGTCGCGTTTATTTGGAACCTAAGAGTAGGGGTTCTA
AAACAATATTTTTTCATTTTTCCAGTAGGTAAAATGGATGATTTTAGTTC
ATCCACCGTCATTTTAAATATTAAAAGAGTTTTTCCAAAGATATTTTTGC
TGATGGTGCCATTTTCCTGGGGGTACACATTTCTAAGAGATGTTTTTTTG
AGTTAAAAAGGTTCGTCTACCCCCTGTATGGAAATTTAATGGAATGGCTT
CAATGTCTTCCGACATTACACAATAGACCAAACGGCTGATTGCAAAAATT
GGTCAGCGAAAATTTGACCACAAGTCAATAATCACAGGTTTGATAAGCTT
ATTTTACGTATCTCATTTTAAGTGAATTCATAGTCCGTATAAAAACCACG
GTCAGGGTCTCCTTCCATTGTTTCTTACTTGAACTTGCGTTTTAGAAATT
AGTTTGTTTTGCTCGCTTTTTGATCATGTGATTAAATCTTAAACCAATCC
CAAGAGGTGTACTTGGTAACGTGATCAAAAACTGAGCAAATCGATTTTTG
GACCTACCTAAGGTAGTCCTTTAAATTAACCCTTGTCCGTTCGTTCGTTC
GTCTGTTGCCAGCTTTTCTCGGGATCGGCTCATTAGTTTTTTCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCCCATCAACAATCAATGAT
GAATTTATTGCGTTGTGTATTTTCGCTAAACGCTATATTTTCTGACTGAT
TTTTTTCATTTTTCTTTTCGCATTGCTTTCTAACTTTTATCATCAGGTAG
GTCCATTCAGCATGTTGCTTGTTATCTTTTGATATTAACAAAGGAAAAAG
CTAACAAAAAGGGGGGTACTAGGGTCGTGAGCTGACAGGGGGGGGGTGCC
GCCCGACTTTTGACCCTTGGACCCTTACCGGGACTAAAAAATGAGAAAAC
AATGGAAAATTTAATTTTGTGAATTTCACTACCCTTATTGGGACAAATTT
GACCAAATTTCGATCTTTCCGGGGGTAAAAAGTTTTCTCCGACCCTTAGT
GCGACTGAAATTTGATTTTCTGGTTTTTCCGACCCTTAGCGGGACTTTGG
AAATCCAAAAAAGGTACCCTTAAGGGCGGCACATATCGTACCCTCCATTG
CCTAAGTACCCCCCCCCCGGAGGTTTTTTTATACGGATTATGGTGAATTC
TCATCATCATGGAAGGAGATATTTGAATTTGAAAGATGCAATTCCTTATT
ATGCAAATCGAATGTTGTTTTTTCAAGAGTGGTAAAAATCATATACCTTA
GCTAAACCTGAAATACCATAATAAAATGTCTCCATTTAGTAGTTTCAGAA
CAATGCGAAGAGTATCTAACCGGGTCTAAATTGTATATGCTGTTTTGCCA
CCCAATCTCCTGAAAGAAGATAGTTTGACAGAAGTTGGGTAGATATTCAG
TATTCATGATATGCACCACTGGAGAGTCTACTGAGAACTTTTGAATTTTC
CACCCAATACGTCACTTAAACAATAGAAAAGTGACGTATTGGGTGGAACA
AAAAAAGAAAAGTTGCATAATTTCGTGAAGTCATTGCAGTGGTGCATATC
ATGAATATTCTATGTCATCCACAGACGAATCCTTAGGGAATTTCCCTCCT
GTACACCTCTTCTTTCAGTCTACGCCACAATTAGTTTTATGGTATGAGAT
GCTAGGCAATTCGATTTGCTTAGCCAGGGTGCAGTAGCGGCGGTCACTCA
ATCTACTTCAAAGAAGATAGTTAGATCATGAACATAGTTAGACAGAAATT
CAATGACTTTTCATCTTGAAAAGTTTTTTTCTTGACTTCACTTTTCCCTT
TCTTACTCTCAGATCATGAAATATTGGAGAAGTCGTTTTCTTCTTCTACC
CGTCAAAAAAACCGATTTAAACCCGACCGTCAAAGAAGACAAGCGTACAC
ACCACGCCGATCATATGTTAAAAATCGAAGGCTTTTTGCGGTTCCTGGAA
AATGTGAACAAGATTAAGAGGAATTACACCAGCAGACCACTCTTCCAAAC
AAGGGTAAGAACACTCTCACTCTAATAATCTAAACTAGCCATAACTTTCA
TTAAAGTGCCACCGCAGCAAAACGAACACATAGAGTTGAATTTGCTTTCA
AAAGGAATGGTATTAGCCCTACAGTAATTTTTGACTTCTCATCTGATCTG
AGACAAAATTCAGTCTTCAAATGCTAACAAATGTGTCAAGAGAGTGATTT
ACAGTTGTAATTTTAAAAGTAAAGCCCCGGTTAACCATTTAACCGGTATA
AGAAGAGTGACAAACAAGTGCGCAAAATTGTGAGCTATTTGCCCAACTAT
CCTTAGGCGTGAAGCTATGAATGCCATTCTCGGTCGCTTTAGGCTCCCTG
CGGTGGCAATTACAGACCTATGTAAAACCGTAGTTGATATAAATCATCAT
CAACAAGAACCCTCTATTCCAATTTTACGAAAATCTTTTTAGCGAGCATA
AACTTTCATGAATCAAGACATAGAAATTGAAATTTTCACACGAAAAAATA
GCTAACAGGGAAAAATACTTTTTGCGTTGAATTGAAACTTTTGTCTTTTG
ACTTATGAAGCTTTAAGTCTCTGTTCGCGAAAGTTTGTACGCCTAAAGTA
CTTCCTTTATTGGAAACCTTTAGAACCATAGAAGATGTGAAAAAAGAAGC
CTGATGTGCGTATTTTACAGAGTCACTTAGTTTTATATAATATACGTTAC
TTTCATAGTCCAACTTGAAGAGACGGAAAGTATCGAACGAACGACGTAAT
GCGACGCCAGAGCGCCCTGAACGTAAAGAGAGCCGAAGCAGCATAAGCAG
CAGTGACAAACGTACGTCGCCGATACAAATCGAAACTCAAGAAAATAAAG
ATAAAGACAGCTCTGCTTCTAGGTATTGATTTTTTGCATTGATGAGTGCT
ATTGCGCAATATCAGTCAAATATCTTCTAACCCTTTTTCAAAGACATTTC
CATCCATAACAAACTTTCGTCACTAAGAAATGGCTTAGTCACAGTAGTAT
TTTGGTGAAACCATCGTATAACATCAAATCTTAGAAAGCCTTAAAAATGT
CCAAAAAAAGGTACTGAGAATGTCATAAGTCGGATATTCAGGAAATGTCA
TTCGCGACGAACACCATTCAACCAGCGTCGTTCATGCGTCAAAGTATACG
CCATGATTCCGCATCGGTTGAGTTCAGCAATGTAGCCATTCCTCCTCCCT
TGTGGGTTTGACCTATTCTGACATATCGAAGGATAGGCGATGCTCTCGTC
CGTCACAGGGATAGTGAAGTTGGAAAAATATATATGCGCGGTGTTTACAG
CCGTAATGTTGGTATACGGAAAAATCGGCGGTAGAGTTTCGAACAAACGT
CAAAGCGTCAAAATATACCGGCCATTCGGCAAAAAACCCGTTTGCGAATT
TCCTTCAAGTTCATCAATAGAGCTAGAATCTATAATTTTTCGATTATCCT
CTCGAACGGTGATCATTTTAAGGAGCTTGGCTTCTTTATCAAAAGTATCC
TTTTCAACAGATCTGTCATCTTTCAATTTTCGAATAACAGGACAATCGAA
GTTAACTGGATCAAACCATGTCAACTGGATAGCGTATTTGGTTTCGGTTT
GAGTCTCCTTTGAAGCATCTTTCACAATTGCGAATTTCCTTAGATAGTAA
TTTGTCTCAGACTATAGCATAATCTAACCGGCATATCTATCAATCTGTTT
TTCATTTTCTTATTTTCTCAGTGCTTCACGCTCAACGTATACAAATTCAT
CATCCAACAAACTACCACTGTCCCTAATCTAAAAACTGGTTTAAATTACT
CTCTGTAGTTCCAATCTTTCTCGAATTTGAATAAATTTTTGCTCCCTGCT
GTTTTCATTTCTTTATTTTTTTCTCAGTGCTTCACGTTCATCGTATACAA
ATGCATCATCCAACAAATTGCCACCGTCTGAAATGCCACCGGAACATATC
CTTTCCTTGCATTCACCACATCATGAGATCATCAAAGCCATGAAAAGTCA
AGAGTAAGTTTCAATTTCATCAATTTCTTCTTCTATTTCATAAGATTTAT
GTTTTTCGTACATGATTTCTTTCTACGTTGCTACAGTAATCAACTTTTTA
TGATTGAGTACTCTTTTGCGAATTGAGATATAAGTTTTACAAAGACAATA
GAGATTAGGTCTTAAATTCCCAAGTCATTTGGATGGTGAACTAAAAATTT
TTCAACTTCTTTTTCGAAGGGAAATCTGCACAAATTTGTGGATTTTTTAC
TCTGTATCAAACAGAAAATAGCATGTAACAGATGTGCAAAAATGTACAAA
ATTATATTGCGGGCTTTAGTTTCAAAATGTTTTTTGTTGCCAAGTTGGTT
TCTCAAGGAATCCCGAGTATCTGCACCATCCTTACCGATTAGAGGTCTAA
AGAGTAATGAAAGAATTTTCCTATAATTTCTGACCGTTCTGCTTGCTCCA
GGGGGGGTACAGACACAGGGTACTGACCCATAGGCAGGTGGTGTCTATTT
TTGCATTTAAAAAAGTCAGTACCTGGTACTACTTTGGGGGTGGGGTGTGT
ATTTTTCACTCTTCAAGCAAGTACAGGATACTATTTGGGTACTTTTTCAC
AGAATTTTGCTGTTTTTCAATAAAAAAGTAGTTTGTTGTAATATTTTGAC
TTTTTAAAAATATTAATTTTTTTTATTTGAAATTTTTTTAATCGACAAAT
CTTTTTTACTCTTTTTGAGAAATTTTTTGATTCTTTTGAAGACAAAACTT
CCAAAATGGTTAAAAAGTGTGCGTGATGAAAATGAAAGAACAAAAGTTTC
TAACTCCATCATTGACAGTTTCTTTGAATTATCTGTCAATTTTCAGTCTG
AAAAACTAACAATAGTACCCCCTCTTGGTCTAATCTGTAAAATTTAAGAT
TTTAGGGGTGGGTGTCCCTATTTTTTACAGCAAAAATGAAGTAGTACTCG
GTACTAAATATGGGTGGGTGGTGCTAAACAAAATTTTAGTAAAAAATCAA
GTTAGTACCCTGCCTCTGTACCCCCCCTCCCTCCCTGCTTGCTCTTGTTT
TGTTTTCAGCCGTCAAAACTGGCTCATTATAAAAACTTTGTTCATCCTTT
TAGGTACGGATTGACATTTGTTCCGAAACAAGACCTTCTATGTGAGTACA
CTTTCATTTCGGCCGAAGCGGTCGCATGGATGATGAAATCAATCGATGGC
TGTCACACTAAAGAAGATGCTCTAGTGCTAGGACAGGTAATTGTAGATAT
TATCATTTTGTTCTTCTAACCAGAATGATTGCTCCGGATAATTTATGTCC
CTGATAATAAATCATCTTATTAGATATAGCATATGTCAAACTTTGTCGAA
CGTACTTTTTCTGTCGAATTTGTCGAGCATTCGTTGTTGTCGAACATTGT
CGAACTTAATGGAATACTCAAAGTTTTAGTGACTTTTGATAAGTTAGATT
AAAGATATAATCGAACTTTTGTCGTTCGATTAAGTTCAACAAAGTTCGAT
TAGTTCGGTAATCGAACTGTTCGATCAATTGCACCTGGAATTTTGTATTT
GGAACAAACATGTTGAGATTAAAAACGTGTTTATGTATTTGCACTGTTGA
TAACGGTGGAGTGGCTTAAACGATTTAATCCGCAGTTTTGACCCGCGAGG
ACGGTAAAAGTACTGATTTACCTTCGGCCTCAATCAATCAGGATCTAGAT
AAATCAGAAGCTTGCCGTCTCTGTCGCAGAGGAACCCTAATGAATAAACT
CGCTATTCTTTCGGAATAGATGGAGTATTCGGGGTCGACGAATGCTGTTT
TGGGAAGTAAAATCCGTTGTCCGAGGAGTTAATATCGAGTTTATGTATTT
GCGGAGGTCCTAATTTGTCTAGATCCTGACTGCCTGGGGACGACGGTAAA
TCATCATTTTTACCGTCCTTGATTTTGCAGTTCAGAAATGCGGGTTATTC
CAAATCGCTTCGGCCACTTTACCGTCTTTAAAAGTGAAAATACATAAACT
CGACGCTATTACTGTTTGCCGTATACTGTATGCAGGGGTTATAACAGTGC
TTTGAAACGTTATATCCTTCATTGCATATAATTGTATAAGCTGCAAAAAA
TTATTTTGTGGAAGGGCCTAACTTTTCAGTTAACGTTTTTTCTATGGTAG
GCAATGTTGGAAGCGAAGGTGATTTTACACGCATCAGAGAGTTCAAGACA
AACTTTTGCTGATGGATTCTATTTATACTTCATCAAACAGGAGAAAAAAG
AAGGTACACGAGGATTCTTTCTCTGGGCATTATTCTCACTGACCTTTATA
TATCCCTGGACCAAGCTATATCCGCCATTCGAGCTATGGGGAATCAACTA
AATTTGATTTAATTGAGTCTTTTTGGTAGTTTTCTTTCGAATTTCTTTAG
TATAAGCACTGACCTTTATATACCCTGGGCCAAGTTCTCAATCCCGGCCA
AGAAAAATCTTTGATCGAAGTTTTTTTTAAGTGGTATCCGTAAAGAAGCC
ATTGTAGTGTTAGAAATTAACGTTTAACGGTGCTACATCATCAAAAGTAT
TCGAGAAAAAGTAGATCTGCCGCTATCGATGCATTTACATCGCTATTGAG
TAGTGCCGCCATTAAGGTACCACTTTTCAAAAAACTCCGATCAAAGATTT
TTCTTGGTCGGGATTGAGAACTTGGCCCAGGGTATATAAAGGTCAGTGCT
TATACTAAAGAAATTTGAAAGCAAACTACCAAAAAGACTCAATTAAATTA
AATTTAGTTGATTCCCCATAGCGCGAACACGAACGGGGAATTGAAATTTG
TTTGAATTATGGAAAATTACCAGAAAGGGCTATCCAGGTACTTTGATTGA
CATTAGAGTTAAAGTGGTTCGGGTTATGGACACTCTGTTGTTCATTTTAA
GTGCCTGATTTACAGTCATTTAAAATGTCTTAAAATACTTCCTTCTGCTA
TTTGTACTAGTAATCGTATGGTTTGGAGTGCAATAAACGATTAATCACGA
GTAACGTCACGTCATCACGTCAGTAAATAATCATTAGGACAAAAGTGTCC
CCCCGCCGAAGAGTGCAAAAAGTGGTAATAGTTAACGATTAATTGCACTC
CTCTAAACCAATCAGATTCGAATAATTTTTGCACGGCTGACGATTACCAT
TCTAAGAACTAGTAGTTAGTTCAAGGTAGTCTACGTTTAAATCGTGCGCC
ATGTTGCAAGTTTTTCCGCTGACATATAACAAGACCTTTGAAAACATGAA
TTTCATAGAATTGGAATAGTAACCGCAGTGATTCTAAAAATAGACATCAA
AATTACTTTTTGTCCGAGTTTTAATCCTGTCATCCTTTGCATTAACTGCT
TTTGTAAGTTAATTACACTTATTTACAATACGAAAGTAATAACTTGCACA
CATTGTGAATCAAGATAGAAAGGATTATGGGATTGAATTTCGGTCAAATG
TTAAAAGTAATAATTATGGCGTTTGCATAGCGGAATTAGATTTTATACAT
CCCATACAAATCTGTAAAATCATGCTGTAAAATGAATCAAAAGATTCTCC
TTGCCTATATTTCTTTCTTGAAATTTCTAGAGGAGAGTGAGAAACGACGA
TTCTGGTTCAACCAAAAGCAAACAGAAGATGAAATGTTAGACTTGTATAA
CATCAAATGGATTGAAGTAGCCGTGTGGAGAGATAAATACGTTTCCGATA
AATTCCTTCATGACCCATTACCACCCGATTTAACGTACAAATTGAGGAAA
CCGTCAGACGGTGCCGTTTTCCGTTGTAAGGCTACTACTAGAATATTTTT
GAATGTTTTTTTTTTCCACTGCTCAAAGAGAAAATTATCTTTTAAGGGAT
AATCGGATGATTTGAGATCCTTGGATGCTATTTTTATCCGTGGAACTGAG
CAAACCTTCAAATCTACTTGCTTAATTTTCTTCCAAAGTCAAAATATTCA
ACCTTCAGTTATTACATTATTTTTTTTTTGGGGGGGGGCTTAGAGGTCCC
ATTTCAGACCGCCAGCCGACAATAATCCCACGCCGTTTATTATATTTTGA
AGAGATTTTTGGAACCCCCCCCCCTTATTAGACCCCTCTTTATCATTCGA
GACCTTAGAGGTTTTTTTACGTTCGAGTAATAACTCTTTTTCCCGTATTT
TTTTCCAGCATCTTCCATCCCGTTGTACAAGAAAATGGAATACAACCCAG
ACATCAACCAAAAGAGCTCTCGTTCAGAATGGTGTGTGATTGCTTATAAT
GGAAATTATTATCCGAACCAAGCAGCATACGCATTGGAAGTCAATTGGCT
TGTAGCTTCTGGTCCTATTATCGCTGATATGGTAAGTGAAACCATTAAAG
CTTTTTTCAGTACGTAAAATTGTTCTTAAGACCTTCAAGAATGGTAATTT
CCCTAAGATGCTATGAGTCACTTAAGACCCTCTAAATCGATAACAAAATC
TACGTAATGTGGAGGAAAAAAGACAGCCCAAAATCAGCCTTAAATTAAAC
ACATGCTGGCACATAACGTTGTTTCAACGTTTATCTCATGTTCACAACGT
CCATATAGTGTTAGATTAATGTTGTGTGCAAGCTGGAAGAATTTTTTTCC
CGTGAGGAATGATAACACCCACCAATGCAATATTCGTATGAAGTGGAATG
AAATTGTTTCCATCTTTAGTTTAATCCTTAGATTACCTCAATTACCTAAG
ATATACTTTATAAAAGCTGATTGGTTATATTTGTTCTGTTCTCTTCCTTC
TTTTTTCTTTTTAATTCCATTTTCCTCGATGATTACCTGTGGAAATAACC
CCCAAGTTTCCTAAAAGAGACAAGATTTCCCGTTCACTCACAAATACAGT
CAACTCTCTATAATTCGAAACTTTCTGTAATTCGAACTAACACATTTCAT
TTGTCTCCTCCCTTTGTGTAAAAATGTTCTCTATAATTCGAATCTTTCTA
CAACTCGAAAAAAAGTCTTAGCTCCTTTAAGAGATCAAATTAGCGAAAGG
CTAATGTCTTCTGACATTACATCAAGGACCCAACAGCTGATTGGTTGCAG
GTGACGTATTTTAGGTCACTTACAACCAGTCAACTGTTGGGTCTATGGTG
TGATACCAGCAGACATTGCAGTGATGTATATCATGAATATTGCGTACCTC
CAAATTTTTCAGGTACAAAAATGGTCACATCGTGCTAGTTCGTGTGGTTT
CCACCTGGTGCCTGCTCCCATGTGTGTTTTCCCACGTCATTCCATACGAT
GCAGTAGAAACCCGTTCCGTAAAAATCCATTCATCCCACTGAATTTGAAA
TGCTTGTTGAAACCAGGTCAAGAAAGACTCTTTGATAGTAAGTTTATTTC
TACGTAAAGTTGTTTGGGTACACGTTTTTTTAAAAGAACATCACCAATTT
TTAAAGTTTTCGGATGTACTAAACCTAAAAATTTTCTCAACATGTTCTAA
TTTTCACCATTTTGTGACTTTGTCTATTTTTATTATCGCTTGCTTTAGAG
TCCTCGATGCTTTAAAATGTTCTTAGCTTGTTCTTGATATTTGACCATGG
AATCTTTATGTTCTTACATAGTTTGTTCTTATAAAAAAGACGTGTATAGG
TGTAATATTTTTGAATGAGTATACTTTTTAAGGCCCATCCCTACCAATTT
TGTTGTCTTTTTTTTAATGCAAGGGGTTATCATACCAAATTTTGAGAAAA
AAAGCTAGTAAATTTACTGCAAATCATAATATTTCTTGAAAAGAGGTTTG
TTTTCATAGCTGAAAAGTGGAAATGCAAGGGGCCCATACACTTTACCTTC
TAGAATAGCCAAATACGAGAACATTTTTGCCATCGGCATCGGACCCAAAT
TGGTCCTTTATCTATACTATAAAAACAAGATCTTCGTCTTCGAAAATTAT
TATTTATAAACTTCTCCCTTTATTGACGAGTCTAAACTTATCTCCCGAAG
CCCTAAATGAAGTCTTTTTTACTTTTTAAAACCAAGTAAATAGGTTTCTA
AGATTGGGCTTTTCCAGAAAAAAACTGTATACCCCCTGTTGAGGAGGTCC
ATCATTTTGTGGCTGGAAATGCTTCAACCCCCTGGAATTCCAGGCAATTT
CAGGCCTAAACCCCCATGGAATTCCAGTTATGACAGATTTTTGTATCTTC
CTATGGAATTCCGCCACATATCAAACCTTACCCCCTTGGAACGGAAATGA
ACCTCCTCAACGGGGTATACGTTTTTTTTTTGGAAAAACCCGATGCAAAT
TCACTGAAATCCTTGAACACCAATCATGAACATTGTTTCCCTTCCAGATT
ACGACTCAAAGACTTGGTCAAGACGCATGATTTACTTCCAAGAATCCATC
TTATACAAGTATAAACATTTTCAGTTTCGTTCGTTCAAATGCACTCTATC
TATGTATACACACACAAATAGATCTCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037208XLOC_037208Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059083-exon-scaffold_316-1575043694:252150..252167TCONS_00059083-exon-scaffold_316-1575043694:252150..252167Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:250795..250945TCONS_00059083-exon-scaffold_316-1575043694:250795..250945Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:247264..247455TCONS_00059083-exon-scaffold_316-1575043694:247264..247455Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:246396..246559TCONS_00059083-exon-scaffold_316-1575043694:246396..246559Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:245265..245390TCONS_00059083-exon-scaffold_316-1575043694:245265..245390Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:244032..244164TCONS_00059083-exon-scaffold_316-1575043694:244032..244164Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:243015..243117TCONS_00059083-exon-scaffold_316-1575043694:243015..243117Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:241493..241687TCONS_00059083-exon-scaffold_316-1575043694:241493..241687Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:240937..241109TCONS_00059083-exon-scaffold_316-1575043694:240937..241109Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:239931..240105TCONS_00059083-exon-scaffold_316-1575043694:239931..240105Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1575043694:238838..238970TCONS_00059083-exon-scaffold_316-1575043694:238838..238970Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:252150..252167TCONS_00059083-exon-scaffold_316-1510915933:252150..252167Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:250795..250945TCONS_00059083-exon-scaffold_316-1510915933:250795..250945Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:247264..247455TCONS_00059083-exon-scaffold_316-1510915933:247264..247455Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:246396..246559TCONS_00059083-exon-scaffold_316-1510915933:246396..246559Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:245265..245390TCONS_00059083-exon-scaffold_316-1510915933:245265..245390Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:244032..244164TCONS_00059083-exon-scaffold_316-1510915933:244032..244164Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:243015..243117TCONS_00059083-exon-scaffold_316-1510915933:243015..243117Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:241493..241687TCONS_00059083-exon-scaffold_316-1510915933:241493..241687Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:240937..241109TCONS_00059083-exon-scaffold_316-1510915933:240937..241109Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:239931..240105TCONS_00059083-exon-scaffold_316-1510915933:239931..240105Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1510915933:238838..238970TCONS_00059083-exon-scaffold_316-1510915933:238838..238970Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:252150..252167TCONS_00059083-exon-scaffold_316-1491911889:252150..252167Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:250795..250945TCONS_00059083-exon-scaffold_316-1491911889:250795..250945Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:247264..247455TCONS_00059083-exon-scaffold_316-1491911889:247264..247455Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:246396..246559TCONS_00059083-exon-scaffold_316-1491911889:246396..246559Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:245265..245390TCONS_00059083-exon-scaffold_316-1491911889:245265..245390Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:244032..244164TCONS_00059083-exon-scaffold_316-1491911889:244032..244164Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:243015..243117TCONS_00059083-exon-scaffold_316-1491911889:243015..243117Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:241493..241687TCONS_00059083-exon-scaffold_316-1491911889:241493..241687Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:240937..241109TCONS_00059083-exon-scaffold_316-1491911889:240937..241109Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:239931..240105TCONS_00059083-exon-scaffold_316-1491911889:239931..240105Clytia hemisphaericaexon
TCONS_00059083-exon-scaffold_316-1491911889:238838..238970TCONS_00059083-exon-scaffold_316-1491911889:238838..238970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_316supercontigscaffold_316:238838..252167 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.235889	0.312298	1.32776	2.15148	0	0	0.000170274	1.21053	0.870516	0.517979	0	0.135184	0.3251	0	0.260156	0.000237071	1.76638	1.2056	0.15242	0	0.31722	0.590678	0.686028	0.465894	1.89618e-07	0.829558	0.756367	0	0.670486	0.386816
Blast
[Close]
BLAST of TCONS_00059083 vs. Swiss-Prot (Human)
Match: DEPD5 (GATOR complex protein DEPDC5 OS=Homo sapiens GN=DEPDC5 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.157e-43
Identity = 100/313 (31.95%), Postives = 165/313 (52.72%), Query Frame = 2 
Query:  623 EIIKAMKSQEYGLTFVPKQDLLCEYTFISAEAVAWMMKSIDGCHTKEDALVLGQAMLEAKVILHASESSRQTFADGFYLYFIXXXXXXXXXXXRRFWFNQKQTEDEMLDLYNIKWIEVAVWRDKYVSDKFLHDPLPPDLTYKL-RKP-----------------SDGAVFRSSSIPLYKKMEYNPDINQKSSRSEWCVIAYNGNYYPNQAAYALEVNWLVASGPIIADMVQKWSHRASSCGFHLVPAPMCVFPRHSIRCSRNPFRKNPFIPLNLKCLLKPGQERLFDNYDSKTWSRRMIYFQESILYKYKHFQ 1507
            EI++AMK    G+  + +Q  L  Y FISAE V W++  ++G  T+  A+ + Q MLE ++I HAS  + +TF  GFY Y I  +K+ +    ++          +    +  KW EVA     +V+++ +H  +P  L   L  +P                 S  A   ++++P  + +  + D+N ++ R EWC   Y+GN+  N AA+ ++++W+  +  ++ +MVQ W  +A+SCGF LVP     F   S     +P R   FIPLN+ CLLK G E LFD+++ +T+  RM  FQE+I +++   Q
Sbjct: 1179 EILEAMKHPSTGVQLLSEQKGLSPYCFISAEVVHWLVNHVEGIQTQAMAIDIMQKMLEEQLITHASGEAWRTFIYGFYFYKIVTDKEPDRVAMQQPATTWHTAGVDDFASFQRKWFEVA-----FVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLN-AAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYG-DPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQ 1484
The following BLAST results are available for this feature:
BLAST of TCONS_00059083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DEPD52.157e-4331.95GATOR complex protein DEPDC5 OS=Homo sapiens GN=DE... [more]
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