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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059048 ID=TCONS_00059048|Name=TCONS_00059048|organism=Clytia hemisphaerica|type=transcript|length=2590bp
ATCTTAATTAGCTTTTATTCACTATAAATTGCTATTAGCAACTAGTCATT
AGCAACTTAATTATACACCCCACTACTCTGGCATAATTAACTtctttttt
aatgactttttttcaTCCCTTCTATTTTATTAGTCATACCCTTGGATCTT
TTGAGTgtgattttttatgattttttttgaggacggaaaaaatattataa
GCGTTATGTTATTTTTCTAAGAAGACGCTTAATaatgttattttgaaaaa
aaatatgtaaatattGTAGAATTTTTGCGTGGTAAAATCATTTATTGGAA
GTTTagtatttctatttttgaaagaTGCTAATTTCGAGAACATTAGCGCA
ATGGGTGTGCGGTATCGGGTTGGTCCAACTTTTCTTTGCTACTGCACTGA
CCGTTTGTGGATTTATTGCGTTGGGGTTATTTCATAATGTCAATGGTTAT
GGTATATGGCTTGGATTACCGGCCTTGATACCTGGCTTAGTAAGCGTGAT
AACACTTGGAACAAGACAAAGCAGTGCCTCAGGCACAGTGTTCCTAACAA
GCCTCATCATTCTGGGTATCGGTATCTGGCACTCAGTTGAAATATATGAG
AAGAAAGACTTCTGGGAGAAATACCGTGGCTACGCAGAGGAAACACCAGC
GAAGCCATTGTGCACCGAACAAGGAAGAACGGTGGAAGATAATCTGGGCA
ATTATCATTGCTATTGTGCTAATGATCCGCAAGAATATAATGAATCGGGA
TATGTTGTTCAATTTTGTGACGAATTTCGTGTTGGGGAGGACCTCTTTTA
CGCCATGTTCATTTTCTCCATTGCTGTTTCCGTTTTCTCATTATTAAACT
CGTTGTTGTCAATCATCGCATGTTGTATATGCAAACCTAAAGAGCTACCA
CCATATCAGAAGAACCCACCCCCTGGTTATTATCACTCAGATGATCACAA
AAATATTTACGCTGTGTCGCGCTAACCCAGCATGAAAAGGGCTCAGTGAa
acaaatatttaattttatctCTACTGTGTTAATATTAAAATCTTTGTCTA
ccataaattttaaattttaagtgaacacgtttttttatatgagcatttaa
aattttgaagccttaggacattcttaactttttaagtttcagGCCTTAGA
ATGTacttattttcactttttttttcgacTATTTTTGTCTATCACTCAAA
TTGTGTGTTTTttagtccgcaaagccttaaatttttcttaagTTGTGCTG
AActttttggccattgaagccttgttttcttatatagtttgttcttataa
aaaaatgggTATCTAATTAATCTATGTTTGGGGAAAACTGCTGATTCCAT
AAAATACTTTATAATACGTAAATTTTTATAACAATGTATAATTTATATCA
CTCAAAGACTAATTTTTCCATGCTTACATGTCATATATTATTATCATGTT
ATCTGTATCCTACTTAAAAAATAATAGAACTTGTCTCAAAAACTTTGTAT
TCTTTTTAGTATTTACAATACATACAcccaaataatatttttctgaaaaa
taaataaaatatttaaaatcaaacatgcttaaaaaatatttttatatgaa
gTTTTATAAGTTTTATATATTTCCATcgaaactttttgaagaaaagaatg
TGGAATagaccatttcacagtcgaaatgaatcatgggtaatcaggaccat
cACGCTGTGATAACGACTTTCTGTTGGCCTAAATTTTTGGCTGTTTCTGC
GTCTCACCAACGGGAAGCCGTCATAGAGGCACAATCAATCTtaattaccc
atgattcatttcgactgtgaaatgatCTATGCAGCCATAGGTCATTTCAT
AGTCTAAATGGATTATGGGTAATCAGGAATGATTGCGCCTCGATAACAGT
TCTcccgttggttagacgcaaaaatgttcaaaaatgttcaaaactttgga
ccaatagtaagtcgtcattagcgcgcagtggtcctgattacccattacgc
tttgcgactgcgAAATGGCCAATAAACCATCTGCATACAAAACTCACTCC
AAAGGTGGTACATCTAAATCGTCAACGAAATGTTCGTCATACTGATTTTC
GCTAATtgcatttttattatttttcattggtGATCCCCCTTTCCTCTTCT
TTCCATTGAAAATAAACGAATTCAAATCTTTAGATTTTTCGTTTTCCTCT
TTTACAATGTTTGTATAATCAATTTTATTCTCGTTCTCTGTCACTTCAAG
TCGTTCAACCGACTTTTGCAAGTCGTCGGTATTCGTTTTACCAGATTCAC
AACCGATAGTTTTCGTTTCCCGAGTTTTAGTTGCATCCGGAAACTCGTTA
CTGCCCATTTTCGCGCCTTTAGAATCGGTTTTCGGCCGTCTAGAACCAGA
GCAACGACCTTCAAGTATATATTTTAGCTTAGGCATGTTGATAAGTAAGT
GTCCGCTGGTTTGCGATCGCTGTGCTGTACTTTTATCTGGACTGATTTCC
TCGTTGAGAGAGAGTTGAAGTATTTTCCCTTTCATTGTAACACGAACGTA
GTGTGGTTGCAAATCAACATCGATCAGTGAGGTATCTgca Run BLAST on NCBI protein sequence of TCONS_00059048-protein >TCONS_00059048-protein ID=TCONS_00059048-protein|Name=TCONS_00059048-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MLISRTLAQWVCGIGLVQLFFATALTVCGFIALGLFHNVNGYGIWLGLPA
LIPGLVSVITLGTRQSSASGTVFLTSLIILGIGIWHSVEIYEKKDFWEKY
RGYAEETPAKPLCTEQGRTVEDNLGNYHCYCANDPQEYNESGYVVQFCDE
FRVGEDLFYAMFIFSIAVSVFSLLNSLLSIIACCICKPKELPPYQKNPPP
GYYHSDDHKNIYAVSR Run BLAST on NCBI transcript from alignment at scaffold_316:161944..174537+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059048 ID=TCONS_00059048|Name=TCONS_00059048|organism=Clytia hemisphaerica|type=transcript|length=12594bp|location=Sequence derived from alignment at scaffold_316:161944..174537+ (Clytia hemisphaerica)
ATCTTAATTAGCTTTTATTCACTATAAATTGCTATTAGCAACTAGTCATT
AGCAACTTAATTATACACCCCACTACTCTGGCATAATTAACTtctttttt
aatgactttttttcaTCCCTTCTATTTTATTAGTCATACCCTTGGATCTT
TTGAGTgtgattttttatgattttttttgaggacggaaaaaatattataa
GCGTTATGTTATTTTTCTAAGAAGACGCTTAATaatgttattttgaaaaa
aaatatgtaaatattGTAGAATTTTTGCGTGGTAAAATCATTTATTGGAA
GTTTagtatttctatttttgaaagaTGCTAATTTCGAGAACATTAGCGCA
ATGGGTGTGCGGTATCGGGTTGGTCCAACTTTTCTTTGCTACTGCACTGA
CCGTTTGTGGATTTATTGCGTTGGGGTTATTTCATAATGTCAATGGTTAT
GGTATATGGCTTGGATTACCGGTAGGTAAAAACTAAACTCTTAAATGTTG
CTAAAACCTGTTCGTTTTTGACAACTTTGGGATATCTCCAGTTGAATCAC
CATAGCTCGAACGTCTATAAATCAGTGTATATTTAAATCGAACAATTCGA
TAAAATCCAGAATCTCCATATTGCAAATGAGGCTATGGTGGTCTTTCTAG
GCCAGAACTGATATTCTAGTTAGGGAATTCCTGGCGAAATTAGGATattg
agaaaatttaaactaaaatggtgcaaatccatttcatcatggatattctt
aactttttttgggaaaatcaacctaaaatattcttacagcattcttaggt
tattatcctaattcagactagatttaacatttagtatatacgtctcaagc
ataaaatagcATTTTTGTAAAATGAGTAAGCCTTACTTGGCgtcttgggg
gtaattgaccatttataattgaaaatgctctaaaaatggcattcttagct
ttagtagcaaaattccatgatggtgatattcttagcattattcttaattt
ttggccattttcatcatggacatacagttgacgctctctaattcgaagtt
ctactattcgattggctcctttattcgatgaaatttaaagtccccgtcaa
caagaaactctcataaacgacgctcccatATTcaataagctcccttattc
gatgaaaatccaattccccttgaagatcgaattatagagcgtcaactgta
cttataaagtttattcttataaaaaagcgtgtatctagACAACAAGTAAA
CATTGGAATCATTATTAACATATACATATTTGTCCGTTTTTAGAACGGAG
TGAAATCTTAGGCATAATGTATATCTAAAGATATTTTAGGAATAAAGCCT
ATTTCGCCACCCACAGATCCATGTATTTGCTAAGCCatattttgaaatct
aaaatttacCAAATATTGAGCACGCGGGactctttaaaataaaaaagaaa
catgaTTTTTCTTTGTCGAATCTAAATTTCTCTATAAAAGGTAGCTTGTG
TTTGTTGAAAAACTATTATCCAAACGGTCTATAACTTGGACATCGTATCC
AAGTTAGGCAATAATTGGACAAAATGGCCTAATTTGAAAGAGTTCCTGTC
TGATGAATTCAAACAGCGACTCTAGTCCCCAGGTCTTTCTATGATTCAAA
TTCTTAAACGTAAAAATGGTTAGCCCGCTCTGGGCATTCGAATTTATGTA
TGGAAACTCGACTGTATTACAGATCGGTTTACCAGAACAGACAGCTCTGA
GATGACCATGAAATTGCTTCTCTTTTATCTAGCTCAAAATAACTATGGTA
AACTTGATAACATTTCAAGCTTCAAAGTTATCTAAATGCTTGTTCAAGGT
GTAGTAATTTGGAAAATACTCATGGAGATCAAAACAAAGGAGATCTTGAA
ACTAAGACGTAAGCGTATGAATTAGCCTGGTAACTTTTAGCTTATGGTAA
CATGTCTAGTTGACCCTTGCCTAGCTAAATAAGCCCATGTTCACAAGGCT
AATTGCAATATAGCgtttaagtttgccttgaaatacTACGCTAGTTATCC
AGTCACAGATTACCATCAGATCTATCCTGGCGACTGAATCAAACATTTCT
AGGCTAGTTTTACCCATTGAGGGGTTtactctaaagaatcctgcattact
aaaaatagacaaaaagaacgacaaatttcataaaaaacgacatattttcg
ccgtccacaaccccgaccgaaagtgactgcaCCACCTTACTTGTACCACT
GTACTTCCTAGGAACAGACTGATTAACCAGATATTGCTAGTTTCACCCAT
TAACCTTCTTCAGTAGCACACTCGTTTTTTGACAAATATCGAAATTCAAA
TGGCGTTGGTGGCTATAGCAATACAATGGAGTTTCTATAACTCAAACACG
CAcgggaaacacaaatttgttcaagttaaaaaaacatttcaagttTCGGA
GTAAAGTTCAgaaggtattgttaactgaagggacgggaaaactttttcga
gtcaAGGAAACATTCGAGTTACAGAGTTTTCAGTTAAAGATACTCTAATG
TTTTTTGTTAAGTCacaagggacgagaaaacttgttcgagttatagaggt
tcgagttgaaGAGACTATACTGTATTGTTAACTGACGGGACGAGaaaatt
tattcgagttaattaaatttcgagttatgaagtaagGTTTAGGAGAaatt
gttaactgaaaggacCAGAATCCTCGTCCGAGTTAAGGATgcattcgagt
tgtagaggttcgaatcATTGTACATGAAGTTTAGTatacccagccggcac
acaacgttgttttaacgttcatctaacgttatacggACGTCGtggacgtt
agataaacgttgaaacaacgttgtgtaccagcttgGCAGAGGTTTGTGTT
GATANGGATgcattcgagttgtagaggcccgaattatagagactccactg
tagaTTTTAGTCAGAATAAAATAATTAACATCGTTGGTACGATCTTGTCT
TTTCTCgctttttaaaacaatagagTTTTCGGCCGCAAATAATATTGAAC
TCATACCACCAGAACCGTTGCAAAACTGCAACATTGAAAGGTTACTGATG
TAGAGCACATATATCTATTAAAAACACTAGAGATCTACTCCCCATGGAtt
tgtcgtgctttggctggaAAGTGTGCCGTAGTTAGGTAGAacatcctacc
taggtcacgtgacattacaatagaatttcagcgcttgaccaatcataagc
ttcgcaggttttcgaaaacaataacaGCAATATTTTTggctatattcact
tttttttgcctacGATGGCTTAAAACAAGACATCTAGCCCTTTAGGCTTT
ATGAATCTTAGGCTatttctggctggagaaaaaCAATGCACCATTTTTTT
AAAGTAGACCACATGTCGGTGTGGGTGATTTGatcatttaagaacattct
ctTGCTAACTCGCTTCGGACAATACTAGTTGTTTGCTTTTAATTGAACTA
ATTGCCGGCGCCGAATTGTGGTCTACATTTCGAAAAGATGGCACATTCAA
CCCCAAAAGCGGAAATTTCGAGTATATCCGACATTGATGTGGATAGGAGG
aacaattttttccaaactgaaaaaaaaacgtttttcaatttcaaaagagA
TTGACTGATATTCTGATCGTTTTTGAACCATAATATTTTGTGAGTCAAAa
gtcgaaaaaagatcttaatGAATTATCGCTGCTAGATGTTTTGAGAATAG
GTACCACTGATTTTCACATTCAAATAATGTTTCAATATAATACAAGATCA
TGAGAATCAATAATGCTTTATAGCTAACTTATGGTTGACGGGTGCCCTCG
CAGCCATTATGGATTATCATGGTTATGCTTGCTGAGTttatacacgttgt
tttttataagaacaaactatataagaaaataaggcttcgatggcaaaaac
gctaagaacaagttaggaacattttaaggcttagaaggctcgaaaacacc
cgattttttagGGAAACGGGTAAatatggtcacaaaatggagaaaataag
aacacttttatGCTTAACCCAAAAAGTTACGAAcatctgaaggcctaaaa
aatatgtatgttcttataaaaaaatgtgtgggGTTGAGAAAATGTATACT
CATAATGCAAGAGCTTCATGGGGAGATATAATCTATTAGTAGATTAGAAA
ATGGTAATTCAAAATAGCGCTATGATTAATAAACTGATTCATAACTTATA
TGAATAGGTATTAAGTTTTGACAAAGATTTTGCGGAGTGGTTTTGATAGA
ATTCCTCAAATATTTGGGTTGATAACATTATGTTTTCAAGCTTTCAGAGC
CAGCTTTCAGTATTTCAAGCAACCCTATCTTATCTAAGCCCACAACTAGT
GATATGCTGAAACTATTtaatcaatcaaaagatatcatttGGACATCAAA
ACCTTattcaaagtatttcaaaacTGTAAGCTAAAGGGAAAAGTATGATT
AACGTCAAGGCTATGGGTTTCTCTGTAAGCATGGTTGATATCCATGGGAA
TCTAAGAATCTATAGGCCGTACTACGCTAAAAGCTATACGTAAAATACAC
TCTGGTACATACTAGGTATTATACTCAAAGGGAAGACTAAATCATGCCAG
TCATGAGATACCCCGGGGGGCGAGTGGGGGTGGgtgcactcgatttctaa
acgacggcatgtgccaccaaaaaattgcatttcaaaataggtcccttaca
gtgcagctcttGAGCAGTTAAAAGATACCCTTTATATAGTGcattttgct
gaagccacctgGATATGAGCCTTAGATGTCgtcgacacaatgtgcaaaac
aaatcaaaattggtgtgaatcaaaactataaagatacacTACAAAACTAC
AAagtgcacccttacagtgctttTCGGTGGTCTCGAAAAatctaccctta
agggcggcacatgccgtagGTCGGACCAAATGATTACCCCCTCCATGGGT
GAGATACCTCTCACTTTTTTAGCTGTTTTGGATGTATCCGCAAGAAAAAT
GACGTTTCACGTATGAAATTTCGCGTATCAATGAATATCTCACGGTGTTC
GCGAATTTCTACGGAACAAAGATTGTCGACGGATATCCTGGGACATTTAg
taaagaaaaactaaattcaTTCAGAAGTTAAAGTTGAAAATTATGAAAGT
GGAAACTGTGATAGAAATAGTACCGGAATTTTGACAATAAGTTGACCTAC
TAAAAATAATTCCGGTGGgtcttttaaaaaatgaattattatttttgtat
caaaagtaaaaaaaaaaaaacacaccaAGCATATGATTTCAAACAGTCAG
ACTCTTTCTTAATTTTCACTATAGGCTGTGTAtgaaaaaacctggaaaac
AGCGCACTAAAACTGCGAATCTATTCCGGTCGATAAAGTTGTCCTACATA
GCAAAAAAACAACATGATATTTTTAACAAGTCTAACACATTgaatttaaa
gcccgaagggctagagtagaacctctaacctttcccaggcaagaaaaaag
tgaagccactttttTCCCATCCAAGAACAATCATGACGATGAATTGTATC
TAATGGTTCCTTTtcttttgaggactgcattttttgaaatctagtgatag
attttacggcatttgtataaaaaccatGCGTGGGCGTTCTGAATGGGAAA
TAAatagcttcatttcccatccaggagtctcgagtctagccattcgggct
tggaagtcaatggtctAACCAAATCTAGTCTGTCTTCCTCCCTGtaatac
attttcaaaaaaaagcaaATATCTTAtgctgctgacgtcagcatgtTCGA
GATCATATTTTACGCAAGAAATCATTATTTGGTAACTGCGTTTCGATAAG
AACTATCGATTAGAGAATATACAGCTACCACTATCCAATTCGATCTGCTC
TCTAGAGAACTtagatttttcttcaaattagatTAAGGAGAGTATTTTAC
TCAACTTTTCAGCAGAGCGGGCCGATGTTTTGTTCAGtttttagaaagat
tcgaattaccttaagggaactaatttttgcgggcaGCAAATAtccaaaac
atttttaattttggcgggaattatttttggcgaatgacagcgtaaatctg
ttctattttgccttattttgagcaattttgatgaatttcagcggttattt
aggcaaggaaacaaaaaaattaattttggcgggaacttattttggcgagt
gagcaaaatatttaattttggcgggaactaattttggcgaatttcgtcta
atttcgccaaatccgccaaaattcaGAATACAATTGTGcaagtttcatgc
ttttttcaCAAACTGAAGTATTGTTATGATATTTTGGTCTAACAGACTAa
actaaaattagttcccgccaaaataagttcccttaaggtatacaGATTTG
AATCAGGGAGAGTTGACTGTGTTTTATAGGGGTTTCCTCGGCTAGATCTC
GAGctaataagtttgaaattttgctagCACGTTGGTTTTCAGCGTTTTTA
GCCCTTTCTAAAATAAGTGAGAAGAacaaataaaaacccatataaAAAGG
CCACTTCGCTGGCGGACTATGATGTGAAGAGACTCCACCGTATTGCAAAA
CCAATGCAAATTATTTACTCCATTGCTTTACTTGGACCATCAAAATTGTA
GATcgttttaattctttttcaacattttttgacgtcaaagcgTTCTAAAT
TGAGGGTTTGCATTATATAATTTGAGGACATTCATTACATTTCGTTTTGA
TGATTCCTTTTAATAACTGCAATAACAACTTCACAAACTCAGCATTTTTC
TCATAGCGATTCAGACTCTAATCTAATTATCGTTAAATTGGCTTATTAAT
ACCTGAAAATCTCTAGTCCTAAAAACGGACTCATTAATCTTAAATCTTAA
ACAGGATATCTAGGCGGAGCAATTATTTCATCGAATCCAGGTATTTTAAA
CCTTGCGCAAACGTCTTCACTGAATTACcatgcgcgtaagaaaattatga
tcacctgttatcaggttaccttACTATTATCGTAATCGGCTACGgctcgc
aaggttgtgggttcaaaccccagtcgggtcataccaaagattctcaaaat
ggtacttgatgcctctctgcttgatgctcagcaatgaagagaaagatcaa
gggtaagtggagcaatctagGGAGAAggagtggcaccctcccctaaCTTC
GGGTAAACAGCTATCGAacgaggagccttcgggtcgcctccgaccgCGGT
CTCAGCCTCACTTGCTATTATCGTATAATTTCGTTATTTTCCAGGCCTTG
ATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAAGCAGTGC
CGTAAgtattaaattttcataataacgtgagcctgatataggggccGATA
CTTGCTTATATGAAAAAAACATGAATTAGTATCTGGCAccccgcgaagcc
ttaaaactttcttaacttgttcttaatattttggccatcgaagcctcatt
CATGTTCTTAAATAGTGTCTAGTTAGAttgtttttctcatttcttCCATA
GTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATCGGTATCT
GGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAAATACCGT
GGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAACAAGGAAG
AACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCTAATGATC
CGCAAGAATATAATGAATCGGGATATGTTGGTAAGTTTatgaaatcaatc
aatcatttaccatttaaattttggcggaaagagaatttggtggatttggc
gaattaaatttttcccaccatccgccaaattaaattcccgccaaatttaa
cttcaggccttaaaaaaagttttttcctcACGTAATACCGTTGTTTNCAA
ATTTAACTTCAAgccttaaaaaagtttttttcttactTAATACcgttttt
tggcctaaattatccttcatccgccaaattaagttcccgcaaaatttgat
ttttttagccATCCAGCAAATTagattccctctgaaaaaatattttttct
ggcGACCCACCAagttaaattcccaccaaaatttctccccttaaggtatt
tatcatggtttaaattttctgtaatCGTGAACCTATGGAAACCATTGTAG
CTTAAATTGGGTAATGTGATCTAGGCgataagttactgggagctaaaagt
aggtgtggcgctctaCCTTAGCATTCGATCTTCCAGGtatagcgcaaata
gaaaagggggatagactccctcactcccggctccgccgacagccaacGGA
TGAATATATTTACTTACTTGCTGATCTTCATTTCAGTTCAATTTTGTGAC
GAATTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCAT
TGCTGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCAT
GTTGTATATGCAAACCTAAAGAGGTAAGGAATTTaactttcccagctggc
acacaaggttttttcgacgtttatctaacattcacaacgtccatataatg
ttagatgaacgttgaaacaacgttgtgttccACTTCCAGCTGGGTTTAAC
TCTAGACCACAAAtttataaagcctgaagggctagatagagtactttggc
tgaaaagtgtgctgggaaaagctttaaaacactCCATCTAGCTCTTTGGG
CTTCACAGAAATCTGTGCTCTAGACAGGAGGTCAAAATTAGAGCTAGGGT
TTCATTTTCGGACAGAATTTCAATTTTCGGATAAATTAGAAATTAGAAAA
TAACCTTTTAAAGTTGTCATCATACAATGGGCTGACCGAAAGAGGTAAGA
AATGAGTGCTATTAGAATGAACTAAACATACGAGGTGTTTAATCATCGGA
CAAAgccaatattttgaaataattcgggaaaaaatttcatgaatttaTCT
ACaagtttccaaaaatgaaataaaagatTTCTGAGATTCGAGAGTAGCTT
CAATATCAATCAGTCTCTAATATAGAAAAGTTTTATTAATCTTCGTTAAG
GCCGGTTTACACttgcgcgctgcgatcgcaattttccgagcaaagcttcc
acgctattggtcaaaagaaaaatgaaaacattccaTTGGTGCGATCTGAC
GTAATGCTTTTTTCGAGCACgcactacatttttatgacgtaatctttttt
ccaagcaaaaaggattgaagccaaaaggtgcaaTCTGAGCGCTAAAGTGA
AGACCGGCCTTTAGAACAGATTCAAATGTGTTGAATGCGACTTACCAAAG
CAAATGACTGTTTCTCTCCAATTTGATTCACATGACGTTACTTTCTTAAG
TGAGGGTAACTTTCATCATCCCCCACTAAACAAACTATCTGTAATTTTCA
tattaaacaagtgatacttttatggacctacctggttatgcattaaACAc
atatatataattgatatctacgtgagcatgaccgttaaacaatcattcag
aacacaaatagtgacgatctattaaaattagttgtttatttcttataaaa
aaaaccgttttaaagaaaacaaaatgtcatactcttgaaatattctttca
tattcaagactttgtgagcaaaatgtatctcatcaaaaaactgagtaatt
tggctaagaatattgatgtatgcttataaatagtgattctaagatgcgtt
ttttgagctgaaaattcttttttttacagatatctgcttgagccatcttt
tacctactttcattaaaaaaatcagaaaaaattaatgatccaattttcac
AAAATCGAAAAAGCCCGTTTTTTGGACCGAAATTGCCCAaacaaaatcgg
gctccgtcacacattttgcccaccaccattttgcacctttgtacaaaaaa
tcgaaagattcctatgattcaatcctgagaaaagttggtaaaagacgaac
ggacgaacgaacacaggttaatttatagtgacctccaccccaccggggta
ggtccaactaGAAGGAAAGCAAGTCATGCTTGTTTGCTTGACTTTTTAGT
ACCAGAAAATGTTGTGGTCTTGAGGTGATGAAAGTTATCCCAACCTTAAT
GAACGTAATCCTAATGGACGATCTATTATTTATTATTCTTTTGAACTTTg
atctaaaaacaaaaagaaaacattgttaGACAGTTTAGAAACTATACATG
AGATACCCGAGGGGGCGAGGTACTAGGGTTGACGGGTGAGGGGTATGTAT
GGACGgaacctccgaaaaccgacccttagaaagactgacttttgctgaaa
aggttgTCCTTAGAGAGACAAAGTTTCTTAAAGTTGAGTGACTCTTAGAG
AGACATCttcacaaaaatttcttcgataTTCAAAAGAATTCTCCAATACT
TTcgaaaaaatgttcttactttcTTGACTTTTCACTCTTCTTTGATCCGA
GTTTGTAAAAAACTACCCTTAGCGAGACTTTGGAACGTGAAAAAACCGct
ccttaccgtccgcacatacccagcactaAGTATCCCCCCCCCCCGACAAG
ATTCCAATTTCGAGTTTTTGAGCAAAGACTCTCACAATGAGAGTGACGCC
CCTCATACAACTTAACATCATCAGATTCCAATTTCGAGTTTTTGAGCAAA
GACTCTCACAATGAGAGTGACGCCCCTCATACAACTTAACATCATCAGAT
TCCAATTTCGAGTTTTTGAGCAAAGACTCTCACAATGAGAGTGACGCCCC
TCATACAACTTAACATCATCAGATTCCAATTTCGAGTTTTTATTTCAGCT
ACCACCATATCAGAAGAACCCACCCCCTGGTTATTATCACTCAGATGATC
ACAAAAATATTTACGCTGTGTCGCGCTAACCCAGCATGAAAAGGGCTCAG
TGAaacaaatatttaattttatctCTACTGTGTTAATATTAAAATCTTTG
TCTAccataaattttaaattttaagtgaacacgtttttttatatgagcat
ttaaaattttgaagccttaggacattcttaactttttaagtttcagGCCT
TAGAATGTacttattttcactttttttttcgacTATTTTTGTCTATCACT
CAAATTGTGTGTTTTttagtccgcaaagccttaaatttttcttaagTTGT
GCTGAActttttggccattgaagccttgttttcttatatagtttgttctt
ataaaaaaatgggTATCTAATTAATCTATGTTTGGGGAAAACTGCTGATT
CCATAAAATACTTTATAATACGTAAATTTTTATAACAATGTATAATTTAT
ATCACTCAAAGACTAATTTTTCCATGCTTACATGTCATATATTATTATCA
TGTTATCTGTATCCTACTTAAAAAATAATAGAACTTGTCTCAAAAACTTT
GTATTCTTTTTAGTATTTACAATACATACAcccaaataatatttttctga
aaaataaataaaatatttaaaatcaaacatgcttaaaaaatatttttata
tgaagTTTTATAAGTTTTATATATTTCCATcgaaactttttgaagaaaag
aatgTGGAATagaccatttcacagtcgaaatgaatcatgggtaatcagga
ccatcACGCTGTGATAACGACTTTCTGTTGGCCTAAATTTTTGGCTGTTT
CTGCGTCTCACCAACGGGAAGCCGTCATAGAGGCACAATCAATCTtaatt
acccatgattcatttcgactgtgaaatgatCTATGCAGCCATAGGTCATT
TCATAGTCTAAATGGATTATGGGTAATCAGGAATGATTGCGCCTCGATAA
CAGTTCTcccgttggttagacgcaaaaatgttcaaaaatgttcaaaactt
tggaccaatagtaagtcgtcattagcgcgcagtggtcctgattacccatt
acgctttgcgactgcgAAATGGCCAATAAACCATCTGCATACAAAACTCA
CTCCAAAGGTGGTACATCTAAATCGTCAACGAAATGTTCGTCATACTGAT
TTTCGCTAATtgcatttttattatttttcattggtGATCCCCCTTTCCTC
TTCTTTCCATTGAAAATAAACGAATTCAAATCTTTAGATTTTTCGTTTTC
CTCTTTTACAATGTTTGTATAATCAATTTTATTCTCGTTCTCTGTCACTT
CAAGTCGTTCAACCGACTTTTGCAAGTCGTCGGTATTCGTTTTACCAGAT
TCACAACCGATAGTTTTCGTTTCCCGAGTTTTAGTTGCATCCGGAAACTC
GTTACTGCCCATTTTCGCGCCTTTAGAATCGGTTTTCGGCCGTCTAGAAC
CAGAGCAACGACCTTCAAGTATATATTTTAGCTTAGGCATGTTGATAAGT
AAGTGTCCGCTGGTTTGCGATCGCTGTGCTGTACTTTTATCTGGACTGAT
TTCCTCGTTGAGAGAGAGTTGAAGTATTTTCCCTTTCATTGTAACACGAA
CGTAGTGTGGTTGCAAATCAACATCGATCAGTGAGGTATCTgca Coding sequence (CDS) from alignment at scaffold_316:161944..174537+ >TCONS_00059048 ID=TCONS_00059048|Name=TCONS_00059048|organism=Clytia hemisphaerica|type=CDS|length=3255bp|location=Sequence derived from alignment at scaffold_316:161944..174537+ (Clytia hemisphaerica)
aTGCTAATTTCGAGAACATTAGCGCAATGGGTGTGCGGTATCGGGTTGGT
CCAACTTTTCTTTGCTACTGCACTGACCGTTTGTGGATTTATTGCGTTGG
GGTTATTTCATAATGTCAATGGTTATGGTATATGGCTTGGATTACCGGCC
TTGATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAAGCAG
TGCCTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATCGGTA
TCTGGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAAATAC
CGTGGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAACAAGG
AAGAACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCTAATG
ATCCGCAAGAATATAATGAATCGGGATATGTTGTTCAATTTTGTGACGAA
TTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCATTGC
TGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCATGTT
GTATATGCAAACCTAAAGAGCTACCACCATATCAGAAGAACCCACCCCCT
GGTTATTATCACTCAGATGATCACAAAAATATTTACGCTGTGTCGCGCTA
AaTGCTAATTTCGAGAACATTAGCGCAATGGGTGTGCGGTATCGGGTTGG
TCCAACTTTTCTTTGCTACTGCACTGACCGTTTGTGGATTTATTGCGTTG
GGGTTATTTCATAATGTCAATGGTTATGGTATATGGCTTGGATTACCGGC
CTTGATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAAGCA
GTGCCTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATCGGT
ATCTGGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAAATA
CCGTGGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAACAAG
GAAGAACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCTAAT
GATCCGCAAGAATATAATGAATCGGGATATGTTGTTCAATTTTGTGACGA
ATTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCATTG
CTGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCATGT
TGTATATGCAAACCTAAAGAGCTACCACCATATCAGAAGAACCCACCCCC
TGGTTATTATCACTCAGATGATCACAAAAATATTTACGCTGTGTCGCGCT
AAaTGCTAATTTCGAGAACATTAGCGCAATGGGTGTGCGGTATCGGGTTG
GTCCAACTTTTCTTTGCTACTGCACTGACCGTTTGTGGATTTATTGCGTT
GGGGTTATTTCATAATGTCAATGGTTATGGTATATGGCTTGGATTACCGG
CCTTGATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAAGC
AGTGCCTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATCGG
TATCTGGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAAAT
ACCGTGGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAACAA
GGAAGAACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCTAA
TGATCCGCAAGAATATAATGAATCGGGATATGTTGTTCAATTTTGTGACG
AATTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCATT
GCTGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCATG
TTGTATATGCAAACCTAAAGAGCTACCACCATATCAGAAGAACCCACCCC
CTGGTTATTATCACTCAGATGATCACAAAAATATTTACGCTGTGTCGCGC
TAAaTGCTAATTTCGAGAACATTAGCGCAATGGGTGTGCGGTATCGGGTT
GGTCCAACTTTTCTTTGCTACTGCACTGACCGTTTGTGGATTTATTGCGT
TGGGGTTATTTCATAATGTCAATGGTTATGGTATATGGCTTGGATTACCG
GCCTTGATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAAG
CAGTGCCTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATCG
GTATCTGGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAAA
TACCGTGGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAACA
AGGAAGAACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCTA
ATGATCCGCAAGAATATAATGAATCGGGATATGTTGTTCAATTTTGTGAC
GAATTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCAT
TGCTGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCAT
GTTGTATATGCAAACCTAAAGAGCTACCACCATATCAGAAGAACCCACCC
CCTGGTTATTATCACTCAGATGATCACAAAAATATTTACGCTGTGTCGCG
CTAAaTGCTAATTTCGAGAACATTAGCGCAATGGGTGTGCGGTATCGGGT
TGGTCCAACTTTTCTTTGCTACTGCACTGACCGTTTGTGGATTTATTGCG
TTGGGGTTATTTCATAATGTCAATGGTTATGGTATATGGCTTGGATTACC
GGCCTTGATACCTGGCTTAGTAAGCGTGATAACACTTGGAACAAGACAAA
GCAGTGCCTCAGGCACAGTGTTCCTAACAAGCCTCATCATTCTGGGTATC
GGTATCTGGCACTCAGTTGAAATATATGAGAAGAAAGACTTCTGGGAGAA
ATACCGTGGCTACGCAGAGGAAACACCAGCGAAGCCATTGTGCACCGAAC
AAGGAAGAACGGTGGAAGATAATCTGGGCAATTATCATTGCTATTGTGCT
AATGATCCGCAAGAATATAATGAATCGGGATATGTTGTTCAATTTTGTGA
CGAATTTCGTGTTGGGGAGGACCTCTTTTACGCCATGTTCATTTTCTCCA
TTGCTGTTTCCGTTTTCTCATTATTAAACTCGTTGTTGTCAATCATCGCA
TGTTGTATATGCAAACCTAAAGAGCTACCACCATATCAGAAGAACCCACC
CCCTGGTTATTATCACTCAGATGATCACAAAAATATTTACGCTGTGTCGC
GCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059048-exon-scaffold_316-1491911889:161944..162414 | TCONS_00059048-exon-scaffold_316-1491911889:161944..162414 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1510915933:161944..162414 | TCONS_00059048-exon-scaffold_316-1510915933:161944..162414 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1575043694:161944..162414 | TCONS_00059048-exon-scaffold_316-1575043694:161944..162414 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1491911889:169288..169344 | TCONS_00059048-exon-scaffold_316-1491911889:169288..169344 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1510915933:169288..169344 | TCONS_00059048-exon-scaffold_316-1510915933:169288..169344 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1575043694:169288..169344 | TCONS_00059048-exon-scaffold_316-1575043694:169288..169344 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1491911889:169545..169773 | TCONS_00059048-exon-scaffold_316-1491911889:169545..169773 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1510915933:169545..169773 | TCONS_00059048-exon-scaffold_316-1510915933:169545..169773 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1575043694:169545..169773 | TCONS_00059048-exon-scaffold_316-1575043694:169545..169773 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1491911889:170380..170516 | TCONS_00059048-exon-scaffold_316-1491911889:170380..170516 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1510915933:170380..170516 | TCONS_00059048-exon-scaffold_316-1510915933:170380..170516 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1575043694:170380..170516 | TCONS_00059048-exon-scaffold_316-1575043694:170380..170516 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1491911889:172842..174537 | TCONS_00059048-exon-scaffold_316-1491911889:172842..174537 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1510915933:172842..174537 | TCONS_00059048-exon-scaffold_316-1510915933:172842..174537 | Clytia hemisphaerica | exon |
| TCONS_00059048-exon-scaffold_316-1575043694:172842..174537 | TCONS_00059048-exon-scaffold_316-1575043694:172842..174537 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_316 | supercontig | scaffold_316:161944..174537 + |
Blast
BLAST of TCONS_00059048 vs. Swiss-Prot (Human)
Match: TILB (Protein tilB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 5.439e-18 Identity = 66/180 (36.67%), Postives = 91/180 (50.56%), Query Frame = -2
Query: 2050 DTSLIDVDLQPHYVRVTMKGKILQLSLNEEISPDKSTAQRSQTSGHLLINMPKLKYILEGRCSGSRRPKTDSKGAKMGSNEFPDATKTRETKTIGCESGKTNTDDLQKSVERLEVTENENKI-DYTNIVKEENEKSKDLNSFIFNGKKRKGGSPMKNNKNAISENQYDEHFVDDLDVPPL 2586
DTSLIDVD+QP YVRV +KGK QL L E+ PD S+A+RSQT+GHL+I MPK+ ++ G G R K K S+ + T TR K +E+LEV +++ D TNIV+E K +P + + I ++ D F D+ +VPPL
Sbjct: 328 DTSLIDVDVQPTYVRVMIKGKPFQLVLPAEVKPDSSSAKRSQTTGHLVICMPKVGEVITG---GQRA----FKSMKTTSDRSREQTNTR-----------------SKHMEKLEVDPSKHSFPDVTNIVQE------------------KKHTPRRRPEPKIIPSEEDPTFEDNPEVPPL 465
The following BLAST results are available for this feature:
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