TCONS_00059009 (transcript) - C. hemisphaerica

BLAST of TCONS_00059009 vs. Swiss-Prot (Human)
Match: PCDH1 (Protocadherin-1 OS=Homo sapiens GN=PCDH1 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 2.321e-58
Identity = 175/575 (30.43%), Postives = 273/575 (47.48%), Query Frame = -3

Query:   18 FHVDEGLPKNTVVGQVRHPKKYTKPKYQFVNPVSQSNFALTSSG----VITTRRTFDHEKLTQTQKR-EGYKLFLS---------RIGTFDFITVTVYIEDVNDNRPRFPVKSWHVFVPEDANHSDDITFPNAHDPDTKQQVI--YRVESG-NTDNAFEVRKIDNKPNYGLALTEGHELDVDFRKDSFNLTISACEKISK-LCSYLKVDITVTDVNDNSPIFDKSLPT-SFEIYENVSLSVPIFQVKVSDADSGKNGEVEFEMFNQND------FRIDKTSGEIFVATNKLDAETKDVISFLIIVNDRGAKPRKSTYYLVAKVLDCNDEAPTLEFHPRSVGSDNLIEGMP-IGTTIGSLTAVD----KDLTQANNEIVSIGLAKGEDFFKLEQTKDEVLNGVATKKYFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFEKQIYETELNETAKLGSFVLQVKASDLDAGINSRISYSITSKHDHR-WFYIEESTGRIMLNDYVDREKTDSVEIQVSARDHGISPLTNKAIVKVKILDANDNDPYFVVSNMNFTLEEN 1649
            + V E  P NT++G +     Y  P    +  +      L   G    + TT  + D E L + Q +  G    L          + G+   +   + ++D+NDN P F      + +PE+ N       P A D D     +  Y +++G      F ++  +++      L     LD + R DS++LTI   +  S    S   + +TV D NDN+P F++  P+   E+ EN  +   + QVK +D+D G N E+E+  F+Q         R+D+ +G I V    +D E    + F ++  DRG  P+ +   +V  V D ND APT+E   R +G     +GM  I   +   TAV      D  +  N  V+  +A G+  F+L Q  +   +  + KKYF++T   +D E      I I A DSG+PPL+ST    V V+D NDN P+F + + E    E  K G  + ++ ASD D+G N+ + YS+  +   +  F I   TG I +   +DRE+ +S E++V A D G   L   A V V +LD NDNDP F++S  NF++ EN
Sbjct:   62 YKVPEEQPPNTLIGSLA--ADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRE-RWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFER--PSYEAELSENSPIGHSVIQVKANDSDQGANAEIEY-TFHQAPEVVRRLLRLDRNTGLITV-QGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEI--RGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVA-GDVPFQLRQASETGSD--SKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMEN 624          

HSP 2 Score: 145.591 bits (366), Expect = 2.665e-36
Identity = 143/505 (28.32%), Postives = 225/505 (44.55%), Query Frame = -3

Query:   84 SGVITTRRTFDHEKLTQTQKREGYKLFLSRIGT---FDFITVTVYIEDVNDNRPRFPVKSWHVFVPED--ANHSDDITFPNAHDPDTKQQVIYRVESGNT--------DNAFEVRKI-----DNKPNYGLALTEGHELDVDFRKDSFNLTISACEKISK-LCSYLKVDITVTDVNDNSPIFDKSLPTSFEIYENVSLSVPIFQVKVSDADSGKNGEV----EFEMFNQNDFRIDKTSGEIFVATNKLDAETKDVISFLIIVNDRGAKPRKSTYYLVAKVLDCNDEAPTLEFHPRSVGSDNLIEGMPIGTTIGSLTAVDKDLTQANNEIVSIGLAKGEDFFKLEQTKDEVLNGVATKKYFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFEKQIYETE--LNETAKLGSFVLQVKASDLDAGINSRISYSITSKHDHRWFYIEESTGRIMLNDYVDREKTDSVEIQVSARDHGISPLTNKAIVKVKI 1523
            +G+IT +   D E L+  +    + +     GT        V V ++D+NDN P   ++   +   +D  AN S+D+    A       QV  R E  N         D  F++R+      D+K  Y L  T    LD +  KD + + I A +  +  L S   + + V DVNDN+P+F +S+ T     EN      I ++  SDADSG N E+    E E   +  F I   +GEI V T+ LD E ++     ++  DRG+   + T  ++  VLDCND  P       +    +++E MP  + +G +T +D D  +  N  V + + +    F ++       NG  T    I +    DRE   +    + A D G PP ++ V  T+NV+D+NDN P        +   L    +LG  V QV A D D+G+N+ + YSI   + +  F I   +G I L   ++R       + V   D G  P    A+V + +
Sbjct:  336 TGLITVQGPVDREDLSTLR----FSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAV---ALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT--PLDYEKVKD-YTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSV-TEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTS-LDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNF---SVMENMPALSPVGMVTVIDGD--KGENAQVQLSVEQDNGDFVIQ-------NGTGT----ILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYV 812          

HSP 3 Score: 125.176 bits (313), Expect = 1.256e-29
Identity = 139/481 (28.90%), Postives = 209/481 (43.45%), Query Frame = -3

Query:   27 VYIEDVNDNRPRFPVKSWHVFVPEDA--NHSDDITFPNAHDPDTKQQVIYRVESGNTDNAFEVRKIDNKPNYGLALTEGHELDVDFRKDSFNLTISACEK---ISKLCSYLKVDITVTDVNDNSP---IFDKSLPTSFE----IYENVSLSVPIFQVKVSDADSGKN--------GEVEFEMFNQNDFRIDKTSGEIFVATNKLDAETKDVISFLIIVNDRGAKPRKSTYYLVAKVLDCNDEAPTLEFHPRSVGSDNLIEGMPIGTTIGSLTAVDKDLTQANNEIVSIGLAKGEDFFKLE-QTKDEVLNGVATKKYFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFEKQIYETELNETAKLGSFVLQVKASDLDAGINSRISYSITSKHDHRWFYIEESTGRIMLNDYVDREKTDSVEIQVSARDHGISPLTNKAIVKVKILDANDNDPYFVV-SNMNFTL 1403
            V + D NDN P+F   S+   + E++   HS      N  D     ++ Y       +    + ++D   N GL   +G    VD R+D   L  S   K    +   +  +V +TV D+NDN+P   I    L T  +    I E+V+    +  V+VSD D G+N        G+V F++   ++   D         T  LD E     +  I+  D G  P  ST  L  +V+D ND AP      +SV      E    G  I  +TA D D + +N E+V          + LE +   + L  ++ +   I+    +DRE   S  + + A D GSP L  T    VNV+D NDN+P F    Y   + E     S V  V   D D G N+++  S+  + D+  F I+  TG I+ +   DRE+  +   Q+ A D G+ P +    V + +LD NDN PY    SN +  L
Sbjct:  268 VTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQA-PEVVRRLLRLDR--NTGLITVQG---PVD-REDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFT---QSVTEVAFPENNKPGEVIAEITASDAD-SGSNAELV----------YSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSV--EQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTSHKL 725          

HSP 4 Score: 122.865 bits (307), Expect = 7.217e-29
Identity = 94/321 (29.28%), Postives = 146/321 (45.48%), Query Frame = -3

Query:    6 FRIDKTSGEIFVATNKLDAET-----------KDVISFLIIVND--RGAKPRKSTYYLVAKVLDCNDEAPTLEFHPRSVGSDNLIEGMPIGTTIGSL----TAVDKDLTQANNEIVSIGLAKG---EDFFKLEQTKDEVLNGVATKKYFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFEKQIYETELNETAKLGSFVLQVKASDLDAGINSRISYSITSKHD--HRWFYIEESTGRIMLNDYVDREKTDSVEIQVSARDHGISPLTNKAIVKVKILDANDNDPYFVVSNMNFTLEENNKVN 902
             R+D  +G+IF     +D E              ++ F + + D  +   PR     +  +V D ND  P          S  +   +P  T IGSL     A D+D     N + S  L  G   ++ F L+  +D+       K+  +  M  +DRE   S +++I   D GSPP  S+    V V+D NDN P FE+  YE EL+E + +G  V+QVKA+D D G N+ I Y+     +   R   ++ +TG I +   VDRE   ++   V A+D G +P + +A V V + D NDN P   +  +     ++   N
Sbjct:   99 LRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQI--EVQDINDNTPNF-------ASPVITLAIPENTNIGSLFPIPLASDRD--AGPNGVASYELQAGPEAQELFGLQVAEDQ-----EEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN 403          

HSP 5 Score: 103.219 bits (256), Expect = 1.069e-22
Identity = 111/385 (28.83%), Postives = 163/385 (42.34%), Query Frame = -3

Query:   12 LKVDITVTDVNDNSPIFDKSLPTSFEIYENVSLSVPIFQVKV-SDADSGKNGEVEFEMFN----QNDFRI------DKTSGEIFVATNKLDAETKDVISFLIIVNDRGAKPRKSTYYLVAKVLDCNDEAPTLEFHPRSVGSDNLIEGMPIGTTIGSLTAVDKDLTQANNEIVSIGLAKGEDFFKLEQTKDEVLNGVATKKYFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFE--------KQIYETELNETAKLGSFVLQVKASDLDAGINSRISYSITSKHDHRWFYIEESTGRIMLNDY-------VDREKTDSVEIQVSARDHGISPLTNKAIVKVKILDANDNDPYFVVSNMNFTLEENNK 1088
            L+  I V D+NDN+P F   +  +  I EN ++   +F + + SD D+G NG   +E+      Q  F +      ++   ++ V  N LD E  D     I V D G+ PR S+  L   VLD ND AP  E   R      L E  PIG ++  + A D D   AN EI          F +  +    +L  +      I     +DRE   ++  S+ A D G+ P ++     V V D NDN P  E         Q     ++E     + V  V+ SD D G N+ ++  +      +     E TG      Y       +D EK     I++ A D G  PL++   +KV+++D NDN P F  S       ENNK
Sbjct:  152 LEGQIEVQDINDNTPNFASPV-ITLAIPENTNIGS-LFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGN-LDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFE---RPSYEAELSENSPIGHSVIQVKANDSD-QGANAEIEYT-------FHQAPEVVRRLLR-LDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASE-TGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNK 520