TCONS_00058846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058846
Unique NameTCONS_00058846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058846 ID=TCONS_00058846|Name=TCONS_00058846|organism=Clytia hemisphaerica|type=transcript|length=3850bp
ATGATATATGATACAACAGAGCAAGACAGACAAACATGACGATTCTTTTC
CATGCTAGGGTTGTAATTTGAATTTAGAGGGATTTTAGATTTCTTGATTT
ACCATCCCtgtaccatcaactgctccaacttgggacagTTGGACGAAACA
TGGGACCGcatgatatctggcctgtattttcactaactgttgaatctctt
tgacaacaaatttgttttgataactccaccaagtttatcaaccacacttt
ctgtcataacatatCACGAtaaactttcactgatagcgcgccctttttaa
ctttttgttttcattcaaaatgaccggacgcccgattggagaattagaga
acgcccatGGCCTAACTGCCTATCGCCCGATCAGGCCCgttgggattaac
aaataacgagtgtgtaacttgccgcgcgagtaaCGTCAAAcactccatcg
ttttgccactaatttgttcttcttcgttgCAGACACTCGCATGTGTTTCA
CTACGGAtttctttcatattttgatttaaaagcctactcgatacgaaaga
gaaattgtgtattttttaatatgcggttcattaactcaaatcaaatgact
ttggaggttcggtgaaatggtgaaatggccatcccatgttttgtcagata
gtcccaagttggagcatttGATGGTATATGAAGGTCAATTATTCAATAAA
GCTGatctttctgatttttatgATCGCAATAGCTTAAAGCAGCGGTCGCC
AGTGCAGACTGCAGCGTAAGCACAGTTTTTTGTGCTCCTGTTTTggttga
ttggttaaaaaatcttgagaaagCAACTTCATTTCTTCAAGGTAAAGAGG
TTgtgagatttgggttagcgaggcaaaaattgctgaaaagctagtaaaat
tgtaatcctcaaatatcgaagttccagccGCACTGTCAATAGGCTGTcgt
gttctccaaaacaacttttCTGTCATAGCAACTTACCTGGTCTGCAAAGT
ATtggagtaatttttttaaacaactttctcagaaagttttatttattttc
acatgaaaacatttaaaaagacCAGATAGTTACTATGAAGGCATTACGCG
AAGATAATATAACCTTAGCTTATGAGAAGGGATGTGTAGGTGTTAatgta
acttggtctaatgtcgacatccctcatctaattccgacacccttttatca
gctgaaattgatagaaaggtcaaagctatttttctttgcttagtggccag
ggaggaataatcctttttcaatcagtaattcaaactttcatattattcct
gtctctaaagaagggtgtcggaattagacaagggatgtcaatattagacc
aacttacaatTAAGgtataatatattgagaattttggttattttaacgtt
tttcaagatttaaagttctggcgagaaagtcgattttgggctatcttttt
aattttatcgaatatttcaatttgggaggggttggcagacttccaggcta
tattctgagtcttattggactatttttgaacttttggtctaagtcttaag
tctagtgttaaaactcagagttaaaactctacccttcaaacctactttag
agcacttacaaatcgattgtggtttcaaaacttcccggtggatttccctt
ttttctcaaatattacgccCATGATTGTACGGTATTTGGCTTAGTATAGC
ACAAAAGAGTCAGTGCCAGATTTGACAGATTATATTATCAATTAGATACT
CCTGTCCTACACaaaatagaatttttaaaattagaACAGGATAACAATGA
TTTGAGGCTAAAAGTGtcaaagaaataagaaaaactGAGCCTCAACCAAA
ATGGTTAAGcaaattgaataaattttggTTGAGGCTAggttgtttttatt
tctttgatactttgagcctcaaatccTTGTTATCCTGTTCTAATTTTAGG
GCAAATTGTGGTATTTCTGGCTTGATACCCTATTCCTACTGTTTTGACCA
TCAATCTGCCCATCCATTTATTTAGGTTCATATAAAAAAGGAGCGTATCA
GCTCAATCATTGCCAATCCAATTTTTTcattcctaaaaataaaaaatata
tatcatatACTAAAATAGATCGAACAAGTCTTCAGGATACAGTTTTACAG
TTAATGGATATTTGTGATGTCAAGAAACTGCCTGTTGAAGAgagagaata
ttttttgaacGCTGAAGGCAAAGAAGACTGGGTCAATTTGGTATTCACTA
ATTACAAAAAACCTCTGTCTGTCGGTATTGGTATACAGAACCAGTTTCTG
GACAACGATAATCAGACTGTCAAACAATGGAAAAGTAGCATCAGGCTCAA
GAAATTCACATCGTTAAGAACATTCAATAGACTAAATAAACATAAGGTTT
ATTTCCAGTTTGTTGGACCGTTTCCAGATTATTTTTATCACCAACATGAA
TTCAGTCATGAATTTACCAAATGCATCAAGATGTTTTTGGAGTTGTTCTT
CCCTGGAAAAAGTGTCATTTTTATGGGAGAAGTGAATCATAAAGAACTTG
ACATAGCCACTCGGATTCACGAAACTTCACAACAACTTCAACTGTTTCTT
CCAGACGTGAATACTTACCTGAAGAACAGCCTTCCCAAAGATGCATTTTG
TGTTTGTTGTTTGAGTTGGTTTGATTTTTATCCTTCGAAAGAATTGAACC
ACGTTTTGGGAGAAGGTTCCATGGAACAAGGTACTGCAGCATTCACTTTC
GGTCACTATGCAATGTTTAAAGAGAGAGAACTTTTCCATGCCAATAATTG
GAAAGCAGATTATGCAATTTCCTCACCATGCAATATAAGTGATGGAATCT
CTCAAGACCAGAAAGAAGGTGGCTTCTATGATTTCATAACTGAAAACGAA
AAAGAGGAAGCCAAAATCTTTACTTTGGAATGTGACCAGGAAGGTTGTGC
TGGCAATAAACTTTCCAAATCACCTTCACCTTCTCATGAGCGGAAACTGA
GTTCCACTTTCAGAATgttatttaaagataagatgTCACCACAGCCTGCA
TCAGCAACTGCGAGCACAAACACAAGTCTCACAGATCTAAGGGAAGTGGA
AGATGGACAACAGAGCTCGAATTCTTTGATGAGTCCAACTTATGATGAAT
CCAACGATCCGGCATTGGCACCAAACACAACATTTGATTTGAGCTGTAAA
ATCCTTCGACGCCTACTCAGGgCTATGTCACACGAAATTTGCCACGTATT
TGGACTATCACATTGTCAATATTTCTCTTGCACCATGAACACCAGTTCCT
CAGTTCTACATACCGACACACAACCCTTACTTTTGTGTCCTGTTTGCTTA
CGAAAGTTACAGTTATCATTGAATTTTCGTGTTAAAGAACGTTATCAGAA
ACTCCTTGAGTTTTTACTGCTTCACACACAAGTTTGCCAACGACCTGGAC
TACCTCGTGAAGAATTTCTGAGAATGCAAGAGACTCAGGTTCTAAGTGAG
AAGAATGTTTGTTTATTCAAAAACGATGTTCAAAACATTCTTTCCATTTT
AGATGTACTTCAGGAAAAAGGAGAAAATCTTGGTTTTTCCACTCTTGACC
ATAACGAAACGGAAGAATAGAGTTCGAAATAAACAAGACAAATGAATGGc
ttgtaatgaaaattttaatttgtaactaactaactaagccttcggatgtt
cttagttttttggatttgaagcctaaaaatgttcttaaaatgttcttatt
ttcagcattttttgagcattttgatgtaatttcttaagaaattgcatgtt
tttaagtctccaaagccttagaatgttcttagaatgttcttaaatttttt
Run BLAST on NCBI

protein sequence of TCONS_00058846-protein

>TCONS_00058846-protein ID=TCONS_00058846-protein|Name=TCONS_00058846-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MDICDVKKLPVEEREYFLNAEGKEDWVNLVFTNYKKPLSVGIGIQNQFLD
NDNQTVKQWKSSIRLKKFTSLRTFNRLNKHKVYFQFVGPFPDYFYHQHEF
SHEFTKCIKMFLELFFPGKSVIFMGEVNHKELDIATRIHETSQQLQLFLP
DVNTYLKNSLPKDAFCVCCLSWFDFYPSKELNHVLGEGSMEQGTAAFTFG
HYAMFKERELFHANNWKADYAISSPCNISDGISQDQKEGGFYDFITENEK
EEAKIFTLECDQEGCAGNKLSKSPSPSHERKLSSTFRMLFKDKMSPQPAS
ATASTNTSLTDLREVEDGQQSSNSLMSPTYDESNDPALAPNTTFDLSCKI
LRRLLRAMSHEICHVFGLSHCQYFSCTMNTSSSVLHTDTQPLLLCPVCLR
KLQLSLNFRVKERYQKLLEFLLLHTQVCQRPGLPREEFLRMQETQVLSEK
NVCLFKNDVQNILSILDVLQEKGENLGFSTLDHNETEE
Run BLAST on NCBI

transcript from alignment at scaffold_314:518590..523305+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058846 ID=TCONS_00058846|Name=TCONS_00058846|organism=Clytia hemisphaerica|type=transcript|length=4716bp|location=Sequence derived from alignment at scaffold_314:518590..523305+ (Clytia hemisphaerica)
ATGATATATGATACAACAGAGCAAGACAGACAAACATGACGATTCTTTTC CATGCTAGGGTTGTAATTTGAATTTAGAGGGATTTTAGATTTCTTGATTT ACCATCCCtgtaccatcaactgctccaacttgggacagTTGGACGAAACA TGGGACCGcatgatatctggcctgtattttcactaactgttgaatctctt tgacaacaaatttgttttgataactccaccaagtttatcaaccacacttt ctgtcataacatatCACGAtaaactttcactgatagcgcgccctttttaa ctttttgttttcattcaaaatgaccggacgcccgattggagaattagaga acgcccatGGCCTAACTGCCTATCGCCCGATCAGGCCCgttgggattaac aaataacgagtgtgtaacttgccgcgcgagtaaCGTCAAAcactccatcg ttttgccactaatttgttcttcttcgttgCAGACACTCGCATGTGTTTCA CTACGGAtttctttcatattttgatttaaaagcctactcgatacgaaaga gaaattgtgtattttttaatatgcggttcattaactcaaatcaaatgact ttggaggttcggtgaaatggtgaaatggccatcccatgttttgtcagata gtcccaagttggagcatttGATGGTATATGAAGGTCAATTATTCAATAAA GCTGatctttctgatttttatgATCGCAATAGCTTAAAGCAGCGGTCGCC AGTGCAGACTGCAGCGTAAGCACAGTTTTTTGTGCTCCTGTTTTggttga ttggttaaaaaatcttgagaaagCAACTTCATTTCTTCAAGGTAAAGAGG TTgtgagatttgggttagcgaggcaaaaattgctgaaaagctagtaaaat tgtaatcctcaaatatcgaagttccagccGCACTGTCAATAGGCTGTcgt gttctccaaaacaacttttCTGTCATAGCAACTTACCTGGTCTGCAAAGT ATtggagtaatttttttaaacaactttctcagaaagttttatttattttc acatgaaaacatttaaaaagacCAGATAGTTACTATGAAGGCATTACGCG AAGATAATATAACCTTAGCTTATGAGAAGGGATGTGTAGGTGTTAatgta acttggtctaatgtcgacatccctcatctaattccgacacccttttatca gctgaaattgatagaaaggtcaaagctatttttctttgcttagtggccag ggaggaataatcctttttcaatcagtaattcaaactttcatattattcct gtctctaaagaagggtgtcggaattagacaagggatgtcaatattagacc aacttacaatTAAGgtataatatattgagaattttggttattttaacgtt tttcaagatttaaagttctggcgagaaagtcgattttgggctatcttttt aattttatcgaatatttcaatttgggaggggttggcagacttccaggcta tattctgagtcttattggactatttttgaacttttggtctaagtcttaag tctagtgttaaaactcagagttaaaactctacccttcaaacctactttag agcacttacaaatcgattgtggtttcaaaacttcccggtggatttccctt ttttctcaaatattacgccCATGATTGTACGGTATTTGGCTTAGTATAGC ACAAAAGAGTCAGTGCCAGATTTGACAGATTATATTATCAATTAGATACT CCTGTCCTACACaaaatagaatttttaaaattagaACAGGATAACAATGA TTTGAGGCTAAAAGTGtcaaagaaataagaaaaactGAGCCTCAACCAAA ATGGTTAAGcaaattgaataaattttggTTGAGGCTAggttgtttttatt tctttgatactttgagcctcaaatccTTGTTATCCTGTTCTAATTTTAGG GCAAATTGTGGTATTTCTGGCTTGATACCCTATTCCTACTGTTTTGACCA TCAATCTGCCCATCCATTTATTTAGGTTCATATAAAAAAGGAGCGTATCA GCTCAATCATTGCCAATCCAATTTTTTcattcctaaaaataaaaaatata tatcatatACTAAAATAGATCGAACAAGTCTTCAGGATACAGGTAATTAG ATTCATAATTTGTCATTTATAGATATAATATATTACGCAAACAAAACTGT ATAATCCAGGTAGCTTTAACGCACCTTTTCTGATGTGAGTGCATCATTGT AATTCTCTTGAGATCTTATCATATTGAACCAttttttggtttgaaaaatt tttaactgtaaggaaataattgaaaatacaaTAAATAAATCTGGATAAAT TTACTGCTTACTTTTTGTGTTTTCAGTTTTACAGTTAATGGATATTTGTG ATGTCAAGAAACTGCCTGTTGAAGAgagagaatattttttgaacGCTGAA GGCAAAGAAGACTGGGTCAATTTGGTATTCACTAATTACAAAAAACCTCT GTCTGTCGGTATTGGTATACAGAACCAGTTTCTGGACAACGATAATCAGA CTGTCAAACAATGGAAAAGTAGCATCAGGCTCAAGAAATTCACATCGTTA AGAACATTCAATAGACTAAATAAACATAAGGTTTATTTCCAGTTTGTTGG ACCGTTTCCAGATTATTTTTATCACCAACATGAATTCAGTCATGAATTTA CCAAATGCATCAAGATGTTTTTGGAGTTGTTCTTCCCTGGAAAAAGTGTC ATTTTTATGGGAGAAGTGAATCATAAAGAACTTGACATAGCCACTCGGAT TCACGAAACTTCACAACAACTTCAACTGTTTCTTCCAGGTATATAAACCG AGAGCATCTCTTATTATAAATTTCTAACATCTTGACTCCAATATTTAAAC TTTTCTTAATTCTTTGGAAGGCTCTTTTTCTTAAACTTACAGTAAGGAAG CtgttaaatattcaaaaaaaagttttgttagAACTAAAAACAGTCTGCTA TATGTTTTAGATTATTCAATTTTACTTGGAtaaaaaagtgccaaaaaagg aaaatctgTGTGTCTTTCAGTTTTCTGTCTGCCTGTCTATCTGTCTGAGC ATTATTTTCACTTTATTCTTAGACGTGAACACTTACCTGAAGAACAANgt ctgtctgtctgtctgtctgtctgccatttttttcattattttcattattt tcactTTATTCTTAGACGTGAATACTTACCTGAAGAACAGCCTTCCCAAA GATGCATTTTGTGTTTGTTGTTTGAGTTGGTTTGATTTTTATCCTTCGAA AGAATTGAACCACGTTTTGGGAGAAGGTTCCATGGAACAAGGTACTGCAG CATTCACTTTCGGTCACTATGCAATGTTTAAAGAGAGAGAACTTTTCCAT GCCAATAATTGGAAAGCAGATTATGCAATTTCCTCACCATGCAATATAAG TGATGGAATCTCTCAAGACCAGAAAGAAGGTGGCTTCTATGATTTCATAA CTGAAAACGAAAAAGAGGAAGCCAAAATCTTTACTTTGGAATGTGACCAG GAAGGTTGTGCTGGCAATAAACTTTCCAAATCACCTTCACCTTCTCATGA GCGGAAACTGAGTTCCACTTTCAGAATgttatttaaagataagatgTCAC CACAGCCTGCATCAGCAACTGCGAGCACAAACACAAGTCTCACAGATCTA AGGGAAGTGGAAGATGGACAACAGAGCTCGAATTCTTTGATGAGTCCAAC TTATGATGAATCCAACGATCCGGCATTGGCACCAAACACAACATTTGATT TGAGCTGTAAAATCCTTCGACGCCTACTCAGGGTAATAAtctttcaaacc tttttcaagCCTTGCAAACCTTCATAAATCTAATTCGCAATTATAAAGGA AGGTAATACTTAGAATGAGATCGATTTGTATGGAAAATTAAAAGGTTGGT AAAGAATAATGGTGTCACAGTGCAGGAGTAACTGACTCCATATCCTAGAT GCTAGAGAGTTAATCACCCTTTGGTTATATTCAAAGTTTCGATGTTCTTA AGAGTTGTTTATAacacattttttcatttattttcaggCTATGTCACACG AAATTTGCCACGTATTTGGACTATCACATTGTCAATATTTCTCTTGCACC ATGAACACCAGTTCCTCAGTTCTACATACCGACACACAACCCTTACTTTT GTGTCCTGTTTGCTTACGAAAGTTACAGTTATCATTGAATTTTCGTGTTA AAGAACGTTATCAGAAACTCCTTGAGTTTTTACTGCTTCACACACAAGTT TGCCAACGACCTGGACTACCTCGTGAAGAATTTCTGAGAATGCAAGAGAC TCAGGTTCTAAGTGAGAAGAATGTTTGTTTATTCAAAAACGATGTTCAAA ACATTCTTTCCATTTTAGATGTACTTCAGGAAAAAGGAGAAAATCTTGGT TTTTCCACTCTTGACCATAACGAAACGGAAGAATAGAGTTCGAAATAAAC AAGACAAATGAATGGcttgtaatgaaaattttaatttgtaactaactaac taagccttcggatgttcttagttttttggatttgaagcctaaaaatgttc ttaaaatgttcttattttcagcattttttgagcattttgatgtaatttct taagaaattgcatgtttttaagtctccaaagccttagaatgttcttagaa tgttcttaaatttttt

Coding sequence (CDS) from alignment at scaffold_314:518590..523305+

>TCONS_00058846 ID=TCONS_00058846|Name=TCONS_00058846|organism=Clytia hemisphaerica|type=CDS|length=4401bp|location=Sequence derived from alignment at scaffold_314:518590..523305+ (Clytia hemisphaerica)
ATGGATATTTGTGATGTCAAGAAACTGCCTGTTGAAGAgagagaatattt
tttgaacGCTGAAGGCAAAGAAGACTGGGTCAATTTGGTATTCACTAATT
ACAAAAAACCTCTGTCTGTCGGTATTGGTATACAGAACCAGTTTCTGGAC
AACGATAATCAGACTGTCAAACAATGGAAAAGTAGCATCAGGCTCAAGAA
ATTCACATCGTTAAGAACATTCAATAGACTAAATAAACATAAGGTTTATT
TCCAGTTTGTTGGACCGTTTCCAGATTATTTTTATCACCAACATGAATTC
AGTCATGAATTTACCAAATGCATCAAGATGTTTTTGGAGTTGTTCTTCCC
TGGAAAAAGTGTCATTTTTATGGGAGAAGTGAATCATAAAGAACTTGACA
TAGCCACTCGGATTCACGAAACTTCACAACAACTTCAACTGTTTCTTCCA
GACGTGAATACTTACCTGAAGAACAGCCTTCCCAAAGATGCATTTTGTGT
TTGTTGTTTGAGTTGGTTTGATTTTTATCCTTCGAAAGAATTGAACCACG
TTTTGGGAGAAGGTTCCATGGAACAAGGTACTGCAGCATTCACTTTCGGT
CACTATGCAATGTTTAAAGAGAGAGAACTTTTCCATGCCAATAATTGGAA
AGCAGATTATGCAATTTCCTCACCATGCAATATAAGTGATGGAATCTCTC
AAGACCAGAAAGAAGGTGGCTTCTATGATTTCATAACTGAAAACGAAAAA
GAGGAAGCCAAAATCTTTACTTTGGAATGTGACCAGGAAGGTTGTGCTGG
CAATAAACTTTCCAAATCACCTTCACCTTCTCATGAGCGGAAACTGAGTT
CCACTTTCAGAATgttatttaaagataagatgTCACCACAGCCTGCATCA
GCAACTGCGAGCACAAACACAAGTCTCACAGATCTAAGGGAAGTGGAAGA
TGGACAACAGAGCTCGAATTCTTTGATGAGTCCAACTTATGATGAATCCA
ACGATCCGGCATTGGCACCAAACACAACATTTGATTTGAGCTGTAAAATC
CTTCGACGCCTACTCAGGgCTATGTCACACGAAATTTGCCACGTATTTGG
ACTATCACATTGTCAATATTTCTCTTGCACCATGAACACCAGTTCCTCAG
TTCTACATACCGACACACAACCCTTACTTTTGTGTCCTGTTTGCTTACGA
AAGTTACAGTTATCATTGAATTTTCGTGTTAAAGAACGTTATCAGAAACT
CCTTGAGTTTTTACTGCTTCACACACAAGTTTGCCAACGACCTGGACTAC
CTCGTGAAGAATTTCTGAGAATGCAAGAGACTCAGGTTCTAAGTGAGAAG
AATGTTTGTTTATTCAAAAACGATGTTCAAAACATTCTTTCCATTTTAGA
TGTACTTCAGGAAAAAGGAGAAAATCTTGGTTTTTCCACTCTTGACCATA
ACGAAACGGAAGAATAGATGGATATTTGTGATGTCAAGAAACTGCCTGTT
GAAGAgagagaatattttttgaacGCTGAAGGCAAAGAAGACTGGGTCAA
TTTGGTATTCACTAATTACAAAAAACCTCTGTCTGTCGGTATTGGTATAC
AGAACCAGTTTCTGGACAACGATAATCAGACTGTCAAACAATGGAAAAGT
AGCATCAGGCTCAAGAAATTCACATCGTTAAGAACATTCAATAGACTAAA
TAAACATAAGGTTTATTTCCAGTTTGTTGGACCGTTTCCAGATTATTTTT
ATCACCAACATGAATTCAGTCATGAATTTACCAAATGCATCAAGATGTTT
TTGGAGTTGTTCTTCCCTGGAAAAAGTGTCATTTTTATGGGAGAAGTGAA
TCATAAAGAACTTGACATAGCCACTCGGATTCACGAAACTTCACAACAAC
TTCAACTGTTTCTTCCAGACGTGAATACTTACCTGAAGAACAGCCTTCCC
AAAGATGCATTTTGTGTTTGTTGTTTGAGTTGGTTTGATTTTTATCCTTC
GAAAGAATTGAACCACGTTTTGGGAGAAGGTTCCATGGAACAAGGTACTG
CAGCATTCACTTTCGGTCACTATGCAATGTTTAAAGAGAGAGAACTTTTC
CATGCCAATAATTGGAAAGCAGATTATGCAATTTCCTCACCATGCAATAT
AAGTGATGGAATCTCTCAAGACCAGAAAGAAGGTGGCTTCTATGATTTCA
TAACTGAAAACGAAAAAGAGGAAGCCAAAATCTTTACTTTGGAATGTGAC
CAGGAAGGTTGTGCTGGCAATAAACTTTCCAAATCACCTTCACCTTCTCA
TGAGCGGAAACTGAGTTCCACTTTCAGAATgttatttaaagataagatgT
CACCACAGCCTGCATCAGCAACTGCGAGCACAAACACAAGTCTCACAGAT
CTAAGGGAAGTGGAAGATGGACAACAGAGCTCGAATTCTTTGATGAGTCC
AACTTATGATGAATCCAACGATCCGGCATTGGCACCAAACACAACATTTG
ATTTGAGCTGTAAAATCCTTCGACGCCTACTCAGGgCTATGTCACACGAA
ATTTGCCACGTATTTGGACTATCACATTGTCAATATTTCTCTTGCACCAT
GAACACCAGTTCCTCAGTTCTACATACCGACACACAACCCTTACTTTTGT
GTCCTGTTTGCTTACGAAAGTTACAGTTATCATTGAATTTTCGTGTTAAA
GAACGTTATCAGAAACTCCTTGAGTTTTTACTGCTTCACACACAAGTTTG
CCAACGACCTGGACTACCTCGTGAAGAATTTCTGAGAATGCAAGAGACTC
AGGTTCTAAGTGAGAAGAATGTTTGTTTATTCAAAAACGATGTTCAAAAC
ATTCTTTCCATTTTAGATGTACTTCAGGAAAAAGGAGAAAATCTTGGTTT
TTCCACTCTTGACCATAACGAAACGGAAGAATAGATGGATATTTGTGATG
TCAAGAAACTGCCTGTTGAAGAgagagaatattttttgaacGCTGAAGGC
AAAGAAGACTGGGTCAATTTGGTATTCACTAATTACAAAAAACCTCTGTC
TGTCGGTATTGGTATACAGAACCAGTTTCTGGACAACGATAATCAGACTG
TCAAACAATGGAAAAGTAGCATCAGGCTCAAGAAATTCACATCGTTAAGA
ACATTCAATAGACTAAATAAACATAAGGTTTATTTCCAGTTTGTTGGACC
GTTTCCAGATTATTTTTATCACCAACATGAATTCAGTCATGAATTTACCA
AATGCATCAAGATGTTTTTGGAGTTGTTCTTCCCTGGAAAAAGTGTCATT
TTTATGGGAGAAGTGAATCATAAAGAACTTGACATAGCCACTCGGATTCA
CGAAACTTCACAACAACTTCAACTGTTTCTTCCAGACGTGAATACTTACC
TGAAGAACAGCCTTCCCAAAGATGCATTTTGTGTTTGTTGTTTGAGTTGG
TTTGATTTTTATCCTTCGAAAGAATTGAACCACGTTTTGGGAGAAGGTTC
CATGGAACAAGGTACTGCAGCATTCACTTTCGGTCACTATGCAATGTTTA
AAGAGAGAGAACTTTTCCATGCCAATAATTGGAAAGCAGATTATGCAATT
TCCTCACCATGCAATATAAGTGATGGAATCTCTCAAGACCAGAAAGAAGG
TGGCTTCTATGATTTCATAACTGAAAACGAAAAAGAGGAAGCCAAAATCT
TTACTTTGGAATGTGACCAGGAAGGTTGTGCTGGCAATAAACTTTCCAAA
TCACCTTCACCTTCTCATGAGCGGAAACTGAGTTCCACTTTCAGAATgtt
atttaaagataagatgTCACCACAGCCTGCATCAGCAACTGCGAGCACAA
ACACAAGTCTCACAGATCTAAGGGAAGTGGAAGATGGACAACAGAGCTCG
AATTCTTTGATGAGTCCAACTTATGATGAATCCAACGATCCGGCATTGGC
ACCAAACACAACATTTGATTTGAGCTGTAAAATCCTTCGACGCCTACTCA
GGgCTATGTCACACGAAATTTGCCACGTATTTGGACTATCACATTGTCAA
TATTTCTCTTGCACCATGAACACCAGTTCCTCAGTTCTACATACCGACAC
ACAACCCTTACTTTTGTGTCCTGTTTGCTTACGAAAGTTACAGTTATCAT
TGAATTTTCGTGTTAAAGAACGTTATCAGAAACTCCTTGAGTTTTTACTG
CTTCACACACAAGTTTGCCAACGACCTGGACTACCTCGTGAAGAATTTCT
GAGAATGCAAGAGACTCAGGTTCTAAGTGAGAAGAATGTTTGTTTATTCA
AAAACGATGTTCAAAACATTCTTTCCATTTTAGATGTACTTCAGGAAAAA
GGAGAAAATCTTGGTTTTTCCACTCTTGACCATAACGAAACGGAAGAATA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037073XLOC_037073Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058846-proteinTCONS_00058846-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058846-exon-scaffold_314-1491911889:518590..520731TCONS_00058846-exon-scaffold_314-1491911889:518590..520731Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1510915933:518590..520731TCONS_00058846-exon-scaffold_314-1510915933:518590..520731Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1575043694:518590..520731TCONS_00058846-exon-scaffold_314-1575043694:518590..520731Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1491911889:520966..521427TCONS_00058846-exon-scaffold_314-1491911889:520966..521427Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1510915933:520966..521427TCONS_00058846-exon-scaffold_314-1510915933:520966..521427Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1575043694:520966..521427TCONS_00058846-exon-scaffold_314-1575043694:520966..521427Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1491911889:521805..522421TCONS_00058846-exon-scaffold_314-1491911889:521805..522421Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1510915933:521805..522421TCONS_00058846-exon-scaffold_314-1510915933:521805..522421Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1575043694:521805..522421TCONS_00058846-exon-scaffold_314-1575043694:521805..522421Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1491911889:522677..523305TCONS_00058846-exon-scaffold_314-1491911889:522677..523305Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1510915933:522677..523305TCONS_00058846-exon-scaffold_314-1510915933:522677..523305Clytia hemisphaericaexon
TCONS_00058846-exon-scaffold_314-1575043694:522677..523305TCONS_00058846-exon-scaffold_314-1575043694:522677..523305Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:518590..523305 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.67031 1.43179 1.45862 1.23221 10.6615 7.88017 7.83637 8.16223 8.37647 14.282 13.5012 13.7845 20.3928 9.65326 7.39549 10.7103 5.31697 6.90098 12.9107 14.8784 10.5379 15.0584 4.59072 5.40555 7.16448 7.64114 14.5801 11.8296 6.71978 5.88405
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012962Pept_M54_archaemetzincn
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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