TCONS_00058845 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058845
Unique Name	TCONS_00058845
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1476

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_314:489977..496887+
coding sequence from alignment at scaffold_314:489977..496887+

transcript sequence

>TCONS_00058845 ID=TCONS_00058845|Name=TCONS_00058845|organism=Clytia hemisphaerica|type=transcript|length=1476bp
ATTTTCATATCTATCGTTGTTATTTCTTCAATTCATAGTGAATTACAGGG
ATAACAACCTCATTGAACTAATCTGCAGGCTCAATgagtatttttagttt
ttatttctttttgcaGGTTCAAGGGAGCACTTTTATTTTCgaccattgtt
ttgattggaactGGTTACTTCTTCATTAAACATGTTTTATCCAGCAAAGA
GAAGAAAATCTTTCTTATTGTCATTCCATTGCAAATCATCTTGAACGTGA
CACAAACGATCATGGACTCCACCGAAGAAGGAAGTGCCATGTATAATTAC
TATTTCAAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACT
ATTGCCAGTCATTTGGTCAATAAAACATTTATCTGAAGCTGCAAAGACTG
ACGGAAAAGCGGCGATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTT
TACATCATGATCGTTTGTTACATCTATACCACGAGAATCATAGTGAGGCT
GATTAAGTTGACGATACCGTTTCAACTCGTCTGGGTGTCAGAGCTGTTCA
CAGAGTTGGCTACATACTTCTTCTACGTGTGGACAGGGTTGAAATTTCGT
CCAGTGAACGACAACCCATATCTTCATCTTCCACAAGCAGAAGACGACGG
AGAAGAAGATATTGAAATGAACCAAATatCAACTTATTCTGGATTCAATG
AAGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGACCGCTTGTA
TAATTAACATTGTGGTCAAGAAATACAATTTGAAATCCCTCTTCATTTGT
TATTAGATGCAAAGGAGAGCTCGGCGTTCCGAGTGGTTCAGTTCTTTGGA
ATAGTAGAAGGTACTCACAACCTAACATTGGAAGGTTTTAAATGGAAAGC
TCATATTTGTTGTGCCAAGACAAGCCATTATGGTACTGTAATAGTAtaca
aataataaataaatgatgttagaaatttttattaataCAGACTATtagtt
ttgttgatattttatttttgttgttcggattttgattttgaggtATTCTA
TTTATTAATGTTTCATAATCAACAATACTTACAAAATTACAAGACCTTTT
GAGATGTGTTCATGACGGGTCAGATGTACTATttgtgaaaataaaattga
acatCCAGTATTTTCATATTCTTTATCTTtcataacgtcaattttattag
aCCTGTACGAGATTAGGCCAAAACtaataacaggttaacaactcaAAAAA
TGTCCATTTTAGGCACTATAGGTAAAAAGTATACGTATTAACAATGGAAA
CtctaaaacctgaaaattttaaaagatcaAGGCTTGGGATCAGCACGTTT
ACTGACTCATTTAAAAGTCTATAAAAGCAGTTTCAGGTATTCTAaataat
attttatattttattatagTTTGTTATAAATATTTAGTTGTCATATAGAG
ACAAAAAGATTTTGCATTAATGTGAT

Run BLAST on NCBI

protein sequence of TCONS_00058845-protein

>TCONS_00058845-protein ID=TCONS_00058845-protein|Name=TCONS_00058845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MDSTEEGSAMYNYYFKIVLAVDLLCCGAILLPVIWSIKHLSEAAKTDGKA
AISLQKLKLFRQFYIMIVCYIYTTRIIVRLIKLTIPFQLVWVSELFTELA
TYFFYVWTGLKFRPVNDNPYLHLPQAEDDGEEDIEMNQISTYSGFNEGLT
RVNRADVKT

Run BLAST on NCBI

transcript from alignment at scaffold_314:489977..496887+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058845 ID=TCONS_00058845|Name=TCONS_00058845|organism=Clytia hemisphaerica|type=transcript|length=6911bp|location=Sequence derived from alignment at scaffold_314:489977..496887+ (Clytia hemisphaerica)
ATTTTCATATCTATCGTTGTTATTTCTTCAATTCATAGTGAATTACAGGG
ATAACAACCTCATTGAACTAATCTGCAGGCTCAATgagtatttttagttt
ttatttctttttgcaGGTTCAAGGGAGCACTTTTATTTTCgaccattgtt
ttgattggaactGGTTACTTCTTCATTAAACATGTTTTATCCAGCAAAGA
GAAGAAAATCTTTCTTATTGTCATTCCATTGCAAGTACGttgttagattt
ttttcaaattgaaaatcgaAACAATTTCTTAAGTGAAGGTACATTTACAC
TCACCCACACACACACAAATGAATTCACGCGAGATTTTACAAAAAGCCGA
CGCCGAACTTTTTCTCACAATTCAGGAATGTTTTCAGATCAATTTTTGTG
ATCTTCATTATATGTGTGAAGTCAATAAATGAATTCATGTTCTTATCCTA
CTGAAATATGACAATAATAAATGATAATAAGAAATAACGAGATTCCTGTC
TTTGTCAGATCATCTTGAACGTGACACAAACGATCATGGACTCCACCGAA
GAAGGAAGTGCCATGTATAATTACTATATATCCTTTTCAACTGCCTAACT
GTTTTCTCTGGTGCCGTGAAATAAACGTTTTCTAAAACTTTGGATTGTGT
TTCGGTTATATCGCAATGCTTTGTATCAAAGGAACTTTTAATACGGTGAA
AAATCTATTAAGCTCTGTAAAATCTATCAAGCTTTGTAAAATCTATCAAG
CTTTGTAAAATATCCAAAAAGGGGAGGTGGGCATTTTTAAAAACTGACTA
GAGGGGAATGCCAGTGAGGGCGAATTTGTTCGAAATCTCAAGTAGGCAGC
AAACCTTTTTACgatcaatgtttttttccttGACGGACAAAATATACTTC
AAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTATTGCC
AGTCATTTGGTAAGAACTTTCtcattacttttttttcaaagcaatttCAG
TTTTAAAAGTACTTCTGTCTCATAGATTTCCGTCTTGAATTGAAGGCACT
TTTCCATNCTTTCtcattacttttttttcaaagcaatttCAGTTTTAAAA
GTACTTCTGTCTCATAGATTTCCGTCTTGAATTGAAGGCACTTTTCCATC
TCGAAATTatgcataattcaccaaaattccAAGAATGCGTGCTAATTTGA
TTTGCAAAATCCCTTTTTCGTCTCATACGAAAAAACTTGCTTTGACAACT
GAATAATAAATGATTATATCAGAGTGACAACAACCGAAGAACAGTTTTAC
CAGAGGATCTGCACTCTCAAGTGACTTATCCCCGTTAAATATTAGAACTG
TTGTGTCGATCGATGTGCTTTCTATTTTGCAGGTCAATAAAACATTTATC
TGAAGCTGCAAAGACTGACGGAAAAGGTAAAGACAAGAACAGGAGCTAAT
TATACTTTTCAGAAAATTGTAGACCAATAGCTTTATTAATACTTTAACTA
ACGCTCTAGCCAAagacaatgaaaaatattttcttttctcttaTAGCGGC
GATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGGTAT
GAATGCATTTAGAAATTGATTCCTTAGCCCTTATTTCTCTCCAAAAGTGG
TTGTTCTCCAATCAAACAATTCGCTGTTGACGTATGCCTTCTCAGGATTG
GTTGATTTCTATCTCGggtggggtacttaggcaaaatgggtgtcaggtat
gtgcgagccataagggtaccttttctcattcctcaaaagtctctcaaagg
ggtacaaattcaaaagttagtctctgaaagggtcccaaaatcacgaaaat
caaaaatttctctctcagaGGGTcatgatttccaaaaattttgaccaaat
attGGTAAAACTCAAaccaagatttgaaaaaaatggaccaaaatttagga
aaaagtctctcaaagggtcccaaaatcaccagaattttgtctctcaaagg
gtcgattttcgattttcggctcggacatacccgtcacctcgcaaacctag
tacccccccccggatttCTATACACTTCAAAACAGAAATTTCTCTTTCCT
TGTATTTTCTTCCGAATTTTCTTTAGATCGTTTGTTACATCTATACCACG
AGAATCATAGTGAGGCTGATTAAGGTATATATAAACCAGTTGGATTTTCC
ATTAGGCCTTGATTATTTACGAATAAAAGCAAGTCCGGAAAAAGCCAAGA
TTTTGATTTATTCATCTTTTGCTTTGAATATCTTGGCTTGATGAATTTGC
TCGGACTTGCTTTTATTCTTTATTAGTCTAAATTATCAGTTGGTTAtgta
ttttgatcattttccaAATACACTCCTTTTTGGACATAcccggaggtcct
ataaattaactgatgttcgtccgttcgtccgttcgttagttaccaacttt
tctcgagattggatcattagtttttcctgatttttggcacaaagatgcaa
aatggtaatgcccaaaatgtgacggagcccgattttcgaaaaaaattcat
ttccggccgaaaatgccggaaatatgccggaaaaccgtttttttggcatt
ttgtcaagatttcatcattagttttttctgattttttgcgcaaagatgcg
tattagcaatgcccaaaacttggccgagtccgattttagagaaaaaatct
tttccggtcgaatatgccggaaatcgccgtttttgcagattttcatcgga
ctttttttttatatttcgttgttttttcacacaaaaacattattaatagt
aatgtccacgatcaagcatggttcaattgttaataaaactgatttttgaa
gccggagttttctaaaaatcgccggaatagccgattttcgccgaaaaaac
ggtatttcttgaatttcttgagctgtactttatatttttttatgaaattt
tgcacactgatgcaaaatttcaatacctaaattgtgacggagcccgattt
tcgaaaaagtttcatttccggccgaaaatgccggaattatgccggaaaaa
ctggttttttggcattttctcgagactttatcattagttttttctgattt
tttgctcaaagatgcgtattaacaatgcccaaaacatggccgagtccgat
ttttgagaaaaattttttccggtggaaaatgcctgaaatatgccggaaat
cgccgtttttctagattttctttGGACTTTTCCCttttaattggttgttt
tttcatttcaaaaacattattaatagcaatgcccaccatcaagcatgttt
caattttcaataaaattttaaaacctattttcgccggaaagacagtattt
cttgaatttcccgagctgtactttatatttttttatgaaattttgcacac
tgatgcaatatgacaataccgaaaatatgacggagcctgattttcgaaaa
acatttttttccggccgaaaaaaccggttttttgacattttctcgaattt
tcatttttagttttctctgattttttgcagaaagatgcgtattcaaaatg
ctcaaaacatggccgagttcgatttttgagaaaaaatttatcctgTTGAA
AATGCCGAAAGTcgtcgtttttgcagattttcattggactttttccttat
atttctatgtttttcacacaaaaacattattgacaacaatgctcaccatc
aagcatgatccaattgtcaataaaactgcataactataaaccctcgaatg
tgacggagcccgattttcgaaaaaacaaatttaggggtaaatttcagcta
aaaaacggctaaaaaaagggttttttggactttgtgaaatattggatcat
tgttttttctgactttttgcatgaaagtaggtaaaagatggctcaaacag
atttttgtaaaaaaataatttttcagctcaaaaaacgcatctttatctat
atctttatctttatctataagcatacatcaatgttcttgaaattactgaa
ttttttgatgagatatgtttttttgctctcgaagtcttgaatatgaaaga
atatttcaagagcatgaaattttggtttctaaacgttttttataagaaac
aaacgactaattttaatagatcgtcactatttgtgttctgaatgattgtt
tcatggtcacgcttatgtagatatcaattatatatgtgttaaatgcataa
ccaggtaggtccataaaagtatcacttgttttaaaTCATTTTGGGCCTCG
GTCTTAGTAATTAGCACTCCAAGCGACATTTGTATTCCCAAAAAACATTG
ATCGATTTTGATGTAAAAGGCCAAACGGTCATCATATGTCTTACGTTCAA
GTGTCTTGGAACACTACTTTGAAAGCGAGGCTCTCAATGATTCTatgtat
ttcaaaaataatgtaTCAAAGAATTGGCGTACTTCTACGAAGTGTTTCTC
CTCTAATTCCTCACTTAGAATTATCTGTTCCTTTCCTTTCAGTTGACGAT
ACCGTTTCAACTCGTCTGGGTGTCAGAGGTAAATAAATGATTCTAATGTA
CAGTAATTAAGTATTTAGCAGTAAGTAAGTTTGCTACCGCAGTCGAGGGT
GACCcaaaggctcccttttctctagctgtctatccgaaggtaggggaggg
cgccactcctttggatttctccacttacccctgatccgtctctttaatta
ctgagcatcaagcagagaatcatcaagtaccatttttagaaactttggta
tgacccggctggggatcgaacccacaaccttgcgcaccgtagctggatgc
tctatcTTCATGTTACGGCCGCTTAGTATTTAGTGTGGTTCAAATGGTTC
GATAATTTGATTGACAATCTAATATTTTAATTCTATAAACCCTTCAAGAT
TTTGAACGtgactgttttttttctttcttcttcttaaTAAAGTTCCTCTT
ACTTCATTAGCTGTTCACAGAGTTGGCTACATACTTCTTCTACGTGTGGA
CAGGGTGAGTATGTATGTAATAGTGACATCAGAGACCATATAAAAGCTAT
TTTAActatttcattacttttttgtaCCAACTTTATTTGCCAACTTGAAA
TATTgaagctattcatgatatgcaccattgcaatgtcttccgttccaccc
aatagctgattggttgaaagtgacgtattgactgcttttacgtcacttcc
aaccaatgagctattggttccatgacgtaatgtcagaagacattgcagtg
gtgcatatcatgaatattctatAAACGTGAATACGATTTAAGAAATATGA
AAGCCGTCGAAAATGtgtagaatttcaaaaagagcTACATTTCTTACGTC
GTACGTACTGAGAACAATGATTTCAGAACATGATGCTTTGTTCGTTAAAT
GGTTGAAATTTCGTGCATTTTCCACACGAACATTTAATGGCATATTAACT
ATGTACCACCGGATACTAATTTGATATagataatttttgttgtttgctCT
TAACAGGTTGAAATTTCGTCCAGTGAACGACAACCCATATCTTCATCTTC
CACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAACCAAATGTAA
GAATGTTAAAAACTTAATTTAGCAAGAATTTCGCTTGGTGCTTTTACGTT
GAACTCTTTCCAAAAGTTCAGATTGTCTCTCCCAACAGTCTTTCCACGAA
TTATATTGGTAAGGTGtacaacataaaaggggttgttCAGATCGTCATCT
CCTACTGTAGTCTATCTATGAATCCTCTTAGTCCGGAGGTGGCTTTTGTT
GACCCTAAAAAGTAAAAtgtatgggtttttattttattttcttattataT
GGTCCCTCTggactttaaaagtttttgccAAGCTTGCAAAGCTGAGAAAA
TTTTCTATAAAGCATTGAAGGGGGTAAGGTAAATTTGGCCTAGTGACCCT
CggaaagtcaatttttgaagttaaaaaattCAACTTATTTCTTTTAATCA
AAAGACACATGTGactcttgtttttatttttccagatCAACTTATTCTGG
ATTCAATGAAGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGAC
CGCTTGTATAATTAACATTGTGGTCAAGAAATACAATTTGAAATCCCTCT
TCATTTGTTATTAGATGCAAAGGAGAGCTCGGCGTTCCGAGTGGTTCAGT
TCTTTGGAATAGTAGAAGGTACTTACAATAACCTAACATTGGAAGGTTTT
AAATGGAGAGATCATTGTTTGTTGTGCCAAGNGGAATAGTAGAAGGTACT
CACAACCTAACATTGGAAGGTTTTAAATGGAAAGCTCATATTTGTTGTGC
CAAGACAAGCCATTATGGTACTGTAATAGTAtacaaataataaataaatg
atgttagaaatttttattaataCAGACTATtagttttgttgatattttat
ttttgttgttcggattttgattttgaggtATTCTATTTATTAATGTTTCA
TAATCAACAATACTTACAAAATTACAAGACCTTTTGAGATGTGTTCATGA
CGGGTCAGATGTACTATttgtgaaaataaaattgaacatCCAGTATTTTC
ATATTCTTTATCTTtcataacgtcaattttattagaCCTGTACGAGATTA
GGCCAAAACtaataacaggttaacaactcaAAAAATGTCCATTTTAGGCA
CTATAGGTAAAAAGTATACGTATTAACAATGGAAACtctaaaacctgaaa
attttaaaagatcaAGGCTTGGGATCAGCACGTTTACTGACTCATTTAAA
AGTCTATAAAAGCAGTTTCAGGTATTCTAaataatattttatattttatt
atagTTTGTTATAAATATTTAGTTGTCATATAGAGACAAAAAGATTTTGC
ATTAATGTGAT

Coding sequence (CDS) from alignment at scaffold_314:489977..496887+

>TCONS_00058845 ID=TCONS_00058845|Name=TCONS_00058845|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_314:489977..496887+ (Clytia hemisphaerica)
ATGGACTCCACCGAAGAAGGAAGTGCCATGTATAATTACTATTTCAAAAT
TGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTATTGCCAGTCA
TTTGGTCAATAAAACATTTATCTGAAGCTGCAAAGACTGACGGAAAAGCG
GCGATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGAT
CGTTTGTTACATCTATACCACGAGAATCATAGTGAGGCTGATTAAGTTGA
CGATACCGTTTCAACTCGTCTGGGTGTCAGAGCTGTTCACAGAGTTGGCT
ACATACTTCTTCTACGTGTGGACAGGGTTGAAATTTCGTCCAGTGAACGA
CAACCCATATCTTCATCTTCCACAAGCAGAAGACGACGGAGAAGAAGATA
TTGAAATGAACCAAATatCAACTTATTCTGGATTCAATGAAGGTCTAACG
CGAGTCAACAGGGCTGATGTCAAAACGTGAATGGACTCCACCGAAGAAGG
AAGTGCCATGTATAATTACTATTTCAAAATTGTGTTAGCTGTCGATTTAC
TTTGTTGTGGAGCAATACTATTGCCAGTCATTTGGTCAATAAAACATTTA
TCTGAAGCTGCAAAGACTGACGGAAAAGCGGCGATCAGTTTACAGAAGTT
GAAACTTTTCAGACAGTTTTACATCATGATCGTTTGTTACATCTATACCA
CGAGAATCATAGTGAGGCTGATTAAGTTGACGATACCGTTTCAACTCGTC
TGGGTGTCAGAGCTGTTCACAGAGTTGGCTACATACTTCTTCTACGTGTG
GACAGGGTTGAAATTTCGTCCAGTGAACGACAACCCATATCTTCATCTTC
CACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAACCAAATatCA
ACTTATTCTGGATTCAATGAAGGTCTAACGCGAGTCAACAGGGCTGATGT
CAAAACGTGAATGGACTCCACCGAAGAAGGAAGTGCCATGTATAATTACT
ATTTCAAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTA
TTGCCAGTCATTTGGTCAATAAAACATTTATCTGAAGCTGCAAAGACTGA
CGGAAAAGCGGCGATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTT
ACATCATGATCGTTTGTTACATCTATACCACGAGAATCATAGTGAGGCTG
ATTAAGTTGACGATACCGTTTCAACTCGTCTGGGTGTCAGAGCTGTTCAC
AGAGTTGGCTACATACTTCTTCTACGTGTGGACAGGGTTGAAATTTCGTC
CAGTGAACGACAACCCATATCTTCATCTTCCACAAGCAGAAGACGACGGA
GAAGAAGATATTGAAATGAACCAAATatCAACTTATTCTGGATTCAATGA
AGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGAATGGACTCCA
CCGAAGAAGGAAGTGCCATGTATAATTACTATTTCAAAATTGTGTTAGCT
GTCGATTTACTTTGTTGTGGAGCAATACTATTGCCAGTCATTTGGTCAAT
AAAACATTTATCTGAAGCTGCAAAGACTGACGGAAAAGCGGCGATCAGTT
TACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGATCGTTTGTTAC
ATCTATACCACGAGAATCATAGTGAGGCTGATTAAGTTGACGATACCGTT
TCAACTCGTCTGGGTGTCAGAGCTGTTCACAGAGTTGGCTACATACTTCT
TCTACGTGTGGACAGGGTTGAAATTTCGTCCAGTGAACGACAACCCATAT
CTTCATCTTCCACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAA
CCAAATatCAACTTATTCTGGATTCAATGAAGGTCTAACGCGAGTCAACA
GGGCTGATGTCAAAACGTGAATGGACTCCACCGAAGAAGGAAGTGCCATG
TATAATTACTATTTCAAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGG
AGCAATACTATTGCCAGTCATTTGGTCAATAAAACATTTATCTGAAGCTG
CAAAGACTGACGGAAAAGCGGCGATCAGTTTACAGAAGTTGAAACTTTTC
AGACAGTTTTACATCATGATCGTTTGTTACATCTATACCACGAGAATCAT
AGTGAGGCTGATTAAGTTGACGATACCGTTTCAACTCGTCTGGGTGTCAG
AGCTGTTCACAGAGTTGGCTACATACTTCTTCTACGTGTGGACAGGGTTG
AAATTTCGTCCAGTGAACGACAACCCATATCTTCATCTTCCACAAGCAGA
AGACGACGGAGAAGAAGATATTGAAATGAACCAAATatCAACTTATTCTG
GATTCAATGAAGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGA
ATGGACTCCACCGAAGAAGGAAGTGCCATGTATAATTACTATTTCAAAAT
TGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTATTGCCAGTCA
TTTGGTCAATAAAACATTTATCTGAAGCTGCAAAGACTGACGGAAAAGCG
GCGATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGAT
CGTTTGTTACATCTATACCACGAGAATCATAGTGAGGCTGATTAAGTTGA
CGATACCGTTTCAACTCGTCTGGGTGTCAGAGCTGTTCACAGAGTTGGCT
ACATACTTCTTCTACGTGTGGACAGGGTTGAAATTTCGTCCAGTGAACGA
CAACCCATATCTTCATCTTCCACAAGCAGAAGACGACGGAGAAGAAGATA
TTGAAATGAACCAAATatCAACTTATTCTGGATTCAATGAAGGTCTAACG
CGAGTCAACAGGGCTGATGTCAAAACGTGAATGGACTCCACCGAAGAAGG
AAGTGCCATGTATAATTACTATTTCAAAATTGTGTTAGCTGTCGATTTAC
TTTGTTGTGGAGCAATACTATTGCCAGTCATTTGGTCAATAAAACATTTA
TCTGAAGCTGCAAAGACTGACGGAAAAGCGGCGATCAGTTTACAGAAGTT
GAAACTTTTCAGACAGTTTTACATCATGATCGTTTGTTACATCTATACCA
CGAGAATCATAGTGAGGCTGATTAAGTTGACGATACCGTTTCAACTCGTC
TGGGTGTCAGAGCTGTTCACAGAGTTGGCTACATACTTCTTCTACGTGTG
GACAGGGTTGAAATTTCGTCCAGTGAACGACAACCCATATCTTCATCTTC
CACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAACCAAATatCA
ACTTATTCTGGATTCAATGAAGGTCTAACGCGAGTCAACAGGGCTGATGT
CAAAACGTGAATGGACTCCACCGAAGAAGGAAGTGCCATGTATAATTACT
ATTTCAAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTA
TTGCCAGTCATTTGGTCAATAAAACATTTATCTGAAGCTGCAAAGACTGA
CGGAAAAGCGGCGATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTT
ACATCATGATCGTTTGTTACATCTATACCACGAGAATCATAGTGAGGCTG
ATTAAGTTGACGATACCGTTTCAACTCGTCTGGGTGTCAGAGCTGTTCAC
AGAGTTGGCTACATACTTCTTCTACGTGTGGACAGGGTTGAAATTTCGTC
CAGTGAACGACAACCCATATCTTCATCTTCCACAAGCAGAAGACGACGGA
GAAGAAGATATTGAAATGAACCAAATatCAACTTATTCTGGATTCAATGA
AGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGAATGGACTCCA
CCGAAGAAGGAAGTGCCATGTATAATTACTATTTCAAAATTGTGTTAGCT
GTCGATTTACTTTGTTGTGGAGCAATACTATTGCCAGTCATTTGGTCAAT
AAAACATTTATCTGAAGCTGCAAAGACTGACGGAAAAGCGGCGATCAGTT
TACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGATCGTTTGTTAC
ATCTATACCACGAGAATCATAGTGAGGCTGATTAAGTTGACGATACCGTT
TCAACTCGTCTGGGTGTCAGAGCTGTTCACAGAGTTGGCTACATACTTCT
TCTACGTGTGGACAGGGTTGAAATTTCGTCCAGTGAACGACAACCCATAT
CTTCATCTTCCACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAA
CCAAATatCAACTTATTCTGGATTCAATGAAGGTCTAACGCGAGTCAACA
GGGCTGATGTCAAAACGTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037072	XLOC_037072	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00058845-protein	TCONS_00058845-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_314	supercontig	scaffold_314:489977..496887 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.7756	28.1238	30.1435	23.1998	20.8237	16.1853	23.8526	22.9824	21.1338	17.7209	24.3363	18.8789	16.636	14.1551	14.2186	14.8154	20.9477	20.7099	11.7805	16.313	21.8385	21.9682	31.7725	31.203	19.0469	23.7699	18.0957	13.1067	27.3786	25.544

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR009637	GPR107-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

Blast

[Close]

BLAST of TCONS_00058845 vs. Swiss-Prot (Human)
Match: GP108 (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 5.992e-72
Identity = 113/201 (56.22%), Postives = 155/201 (77.11%), Query Frame = 1

Query:  121 KGALLFSTIVLIGTGYFFIKHVLSSKEKKIFLIVIPLQIILNVTQTIMDSTEEGSAMYNYYFKIVLAVDLLCCGAILLPVIWSIKHLSEAAKTDGKAAISLQKLKLFRQFYIMIVCYIYTTRIIVRLIKLTIPFQLVWVSELFTELATYFFYVWTGLKFRPVNDNPYLHLPQAEDDGEEDIEMNQISTYSGFNEGLTRVNR 723
            KGALLF TI LIG+G+ FIK+VLS KEKK+F IVIP+Q++ NV   I++S EEG++ Y  + +I+  VDL+CCGAIL PV+WSI+HL +A+ TDGK A++L KLKLFR +Y+M++CY+Y TRII  L+++ +PFQ  W+ +L  E +T  F+V TG KF+P  +NPYL LPQ ED  EED++M Q+ T SGF EGL++VN+
Sbjct:  338 KGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPYLQLPQ-ED--EEDVQMEQVMTDSGFREGLSKVNK 535

The following BLAST results are available for this feature:

BLAST of TCONS_00058845 vs. Swiss-Prot (Human)

BLAST of TCONS_00058845 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GP108	5.992e-72	56.22	Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3	[more]

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TCONS_00058845 (transcript) - C. hemisphaerica