TCONS_00058830 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058830
Unique NameTCONS_00058830
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058830 ID=TCONS_00058830|Name=TCONS_00058830|organism=Clytia hemisphaerica|type=transcript|length=1643bp
GTgagaacaaaaataattttcacccaaaaaaaatGAACGGTTTGAGAAAA
ACAAAGACAGGCAATCAAGTTCATTCCCGCTCCCTTGGATTGGCAGACAG
TGGATATGCAATCATCATAGATGTTCGATCATCAAACGGATTATCAATAG
AAACCATTGTAAAATCACTCGAAGAATTTTTAACAATGGTCAACCTATTG
GCAGGACCACCCAAAATATCAATGCTTGGCATCTATTGCATTGGTGATAT
CGACCTCAAATGTATAATTCCTTTAACCCACACCAACAATGGAATGCAAA
GTTTGATCTTGGCTTTACCTGGAATCCTACAATTTACAAAATACCAGAGC
AATATCAACtctaaaggtttttttattgAAAACTTGGAAATGGTTTTTGC
AGAGATCAACAAACAGTTCCAACAGAAGCATGAATACAACAATAACAAGA
ATGTCAAAGCAGCAAAACAGTTGAACATCTGCTTACTGACAGCACAAGGA
ATAACGACAAGCATTGAACGCCACATTGCAAGAATCATCAAAGAAACAAA
TCTTGAAATAATTAAGGTTCAAATAACAGTGAGTTGGATGGAATATTATG
TGGCTACGTTGAAACGCGTTATCTGGAAAATGATAAAGTGAATTTGGAGC
AGTATTTTCGTTCTTGGTTAAAAGATAGTTCTGGATCTGATGAAGTACAT
CTAACAATCACCTTTAACGAGACGAACATCAATTTCCATCTGACATGCAG
TAAAAGTCGTCAAAAACCAATCATTGCTGTGTTTAACTTACAACCCAAGA
ACTTTGTGGACATCGGTGGTGTTTGTGAATCAGTCTTGTATGGCATCCCA
CGCATCATGAAACCGACCAGTTGCTGGAAAATGGACTGGGACGAGCTAGA
AAACAACCAATCACAGTTCAATGCGTTAAATGCGTACATGAAAGACAAGT
CTTTGGCCTTGGTTCTCGAATCCAAGGAGATCGGACCAATTCATTCGAAT
TTCTTGGTGTTACCATCAACAAATGGAACGATGTTGATCAAATCTATAGC
TGTCAGGGATATCATGTTATCGCACGCATCTGCTAATGCTACTAATGATC
AAAGTCTTGATGGTgatgtcaaagaaaaagtctGGAGCGACATGAATAAG
ATTCCAGTGATGAGTGACTACAACCCTTTCAATTATGTCAGCAACCTGTT
CGAAACAGCATTGAACACAGCAACCAATTCAGCAGGTAGCAACAGGAAGA
AAATAACAAACCAAACAGCAAGGAATATGGAACCGCCACCTAAGAAACCC
AATGTTTCTTACTCAAATTTTGATAAACCTACAGCACGCACCATGCCTCA
ACCAGCATCTGTTCGTCAAATCAAGCCGTTCTCGCCATGGCATGCCGCTC
CCTGTGTCAACAATGACGATATCGGTCACGTGACAACCAATGACGTCATT
CCTCCATACACATCGGCATTTTCATCAGCATCTAACCAAGGGAAAAAGAG
AAAACCTCGTTTCGAACCACCTCGAGGTTACAAGCAAACAAAACATTAAG
AAAACCAGGGTCTCTCAGTGAATTGCAAAATGGTGACGGtgtattttttg
gaaattggaCCCTGTTAAAAAGCTGTATGATGTAGTGGTACAT
Run BLAST on NCBI

protein sequence of TCONS_00058830-protein

>TCONS_00058830-protein ID=TCONS_00058830-protein|Name=TCONS_00058830-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
MKPTSCWKMDWDELENNQSQFNALNAYMKDKSLALVLESKEIGPIHSNFL
VLPSTNGTMLIKSIAVRDIMLSHASANATNDQSLDGDVKEKVWSDMNKIP
VMSDYNPFNYVSNLFETALNTATNSAGSNRKKITNQTARNMEPPPKKPNV
SYSNFDKPTARTMPQPASVRQIKPFSPWHAAPCVNNDDIGHVTTNDVIPP
YTSAFSSASNQGKKRKPRFEPPRGYKQTKH
Run BLAST on NCBI

transcript from alignment at scaffold_314:396655..403784+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058830 ID=TCONS_00058830|Name=TCONS_00058830|organism=Clytia hemisphaerica|type=transcript|length=7130bp|location=Sequence derived from alignment at scaffold_314:396655..403784+ (Clytia hemisphaerica)
GTgagaacaaaaataattttcacccaaaaaaaatGAACGGTTTGAGAAAA
ACAAAGACAGGTATTTAAGCtatgtaaatgttttttaatttcataatATG
CGATCGGAACCTCAAATAATCACTGATTGTTCtttatcaaaatctttttt
gatggacATGAAAAGAGAGCCATCAAGAACCATTTTTGTTATGATCTTTG
TTATGACTCAACTGTGGTTTTAACCCACAACCTCGCTCGTCTCACGAAGG
AGCACCAGTTGTATCTAATTGTTATTTATCCATCGAAACTACTCCAATCG
TTTGATTCTATTTTTTCAGGCAATCAAGTTCATTCCCGCTCCCTTGGATT
GGCAGACAGTGGTATGGAATGTTTTCTTAGTGAGAATTTCAAACTGCATC
CGTCATTCATTCATATTACCTTTAGTGACTGTTCCTTAAATTATTTCAAC
CCAGAGCAATTCATGGATGACAAAGCTAGTTGGACCAGGTTCTCTTGAAA
ACTACACATGATTCtcaataattcgaacttattcagatatttgaaaaaat
attgcaaaagtaATTATTAAAGTGCTCTAACTATCttatcttatttttaa
aatgataatATGATTGCAAACATTTTCCTAGGATATGCAATCATCATAGA
TGTTCGATCATCAAACGGATTATCAATAGAAACCATTGTAAAATCACTCG
AAGAATTTTTAACAATGGTCAACCTATTGGCAGGACCACCCAAAATATCA
ATGCTTGGCATCTATTGCATTGGTGATATCGACCTCAAAGTTTGATTTAT
TctcacttttattttttgtaaaactgatttttgaactttttgttaCTATA
AAGGAGAGTTTCGAGAAGTATGGCGAATAATGTGGATTTTATAGAAAGGA
TCATTTATTGGCAAAAGCAGTATCTCCTTTCTTCATTGTAGTTTCTAGAT
GAGAAATGAGCAGGAAATGAGCCAAAAAAGAAATGTGTTACCTTTTACCT
TTCAGTGTATAATTCCTTTAACCCACACCAACAATGGAATGCAAAGTTTG
ATCTTGGCTTTACCTGGAATCCTACAATTTACAAAATACCAGAGCAATAT
CAACtctaaaggtttttttattgGTAAGTCATGACATAAACAAGAGGTAT
TTTTCATGACCTTTACAAATCAGAATATAAATTTTAAGCTTTCGTATGTA
AACAAGTTGTGTTGTGTTGTTCCAATCGGAAGGTAATGAAAGTTACCCTT
AACTTATATAAGTAACCCAATTGAGAATATCatattgaacaaaaatactg
gcgaaatatttaaaattataGATTCcgtttttgtccccgctgaaaataat
taaattaacaaattctcactgcaaaatattttgtcattttttcatCCTCA
CTGAATTATATGActtcaaaacaatggaattcatgTCTCCATCCATAAAA
AAAACGGGATTATCAATCCCCGTCGAGtttttagtccgttatttttacca
aaACTAAAAAACTGGTCTGTGAGACTACACAGTTCACGATCAATACAAAG
TGAGATTTCTTTCTATCTGATTTCGTACTGACTGTACAGTATTGCGAAAT
AGTTTATGGGATCGATTAGTACACactttatataaaggtcagtgattgtA
CATTACCTTTATTCTAGAAAACTTGGAAATGGTTTTTGCAGAGATCAACA
AACAGTTCCAACAGAAGCATGAATACAACAATAACAAGGTATATATATGA
GAAAATTTTGCCGATTGGATTTggtttttagaaaaagtaatgattTGATG
AATAACTTGTTAAATGAGATGCGTTTCAGTTTTCTTAGAATTTTGTGAAA
TGCAAGGCATAGTTAAATCAACTGTGCTTCTAAAAAATTAAAGGATTATT
TCAAGTTCCCGTAAAGGAGGATCCCTCTTAATATACTCTCTatgattcga
atctctctgtaattcgaacaaataagattccccgttctGTATTAATTCTT
TTAGAATGTCAAAGCAGCAAAACAGTTGAACATCTGCTTACTGACAGCAC
AAGGAATAACGACAAGCATTGAACGCCACATTGCAAGAATCATCAAAGAA
ACAAATCTTGAAATAATTAAGGTACAATATTGCGCGTTATACGTGATTCA
AACAGATTCAAAGGAGAAAAGTCATTGTTACCCGTTTTTAGATCATTTTT
AGCTAAAAGTCTTGGATTTAGTTTAAAGAGCCTGTAAATTTTATAACTAC
GATATCTTAAAAAAGTTAAGACTGTCTTCTTAAGAATTTAAACCAGAGTA
TACATAGCCGAATAGATAGTACGTTGTCGTTTTTTCATGAATAGAAAGTT
CAAGTGGCTAGAATGAATACAACACTACACCCAGGTTCAGATGAGTTACA
AAGCAGTGATGAAATGACATGTAAGAGTAAAAGTTgaataattttcattc
agtaatTTATCATTGGTTACAAGGAGTGTTTAGGGTTGTGATTTGACAGG
CATTTCgaaaataaacacttaaaaAGTCTTACGGAGggactaaaatgtcg
aaaattttTAGAACTTATTACCCTGAAGGGATTCAGTtccttatttttgt
tttttttgtaaccTTTTGTCACAATTCTGACGGTGTCCATTCTGTATAAT
TGCTCCCCctgagaaaatattcaaaaggttATACTCGAATCGTTTCAGGT
TCAAATAACAGTGAGTTGGATGGAATATTATGTGGCTACGTTGAAACGCG
TTATCTGGAAAATGGTACAACCCTCTTTTTTTCTATATCTACCTTCAGTT
ATTACGGTAAATTCCCGAACAGATATCAGAAATGTTCCTACCAAGCTATG
GACGGAGGAGTTAGTTCTCTATATTTAAATTCTTTCTAagtaaaaatact
ttaaaatttGATACACTACTTAAAAGTCAATcatttaaaatgttttcaaa
attttgtaaatgGTTACAATatgtaccgggtgcaccaaaaaagtatacag
gtatgtcgagatattgtgagcttcaggattttattttttttcattctttt
tttatcgtatagaggatgctctaacttgaattttgagctatcatacttta
ggtttgaaaaaatagttcgaaaattatttttttttaactgactttttttt
aatgtcgaaatttcaaaagataccaaaaaatgcaactttgttcatcaaaa
ctcgttacagaatttaaaaatatagTAAAACAAGCTATATCCatgtggga
taatatttttggaaaaccggaaaaaaagttttggaaatctccagGACAGg
caggttttgatgttatgtgtgtgctatgtgagaaaactttTAGATCAGca
ttcctcgactagttgctcaaagaacttgggtctgcattgagtttgctcgt
gttggaaatgttcatgacgtgcaaataagatgAAGAAACTGTTAGCAAAA
TATAGATaagaaaagaagaattaaaaaaacaataaaattgtgttttttgt
tattttgtcttatttatagcaatgtcaaatttaatgtatgatcaggtatg
atagctcaaaattcaagttagagcatcctctatacaataaaaaaagaatg
aacaaaaaaaataaatcctgaagctcacagtatctcgacaaacctgtata
ctttttttggtgcacccggtacaaCAGATGATTCATAACACTCATAGTTA
TTTTCTAGAAAAACAATTTAACTTTAGATAAAGTGAATTTGGAGCAGTAT
TTTCGTTCTTGGTTAAAAGATAGTTCTGGATCTGATGAAGTACATCTAAC
AATCACCTTTAACGGTTTGTTCTTCTAGTTTTATCTCCGAAAAGTATACA
ATTAATAAATCAAGTATGATTAACCCTTTGTAACAATAACCGGTCCATTT
TAAGATATATGTAAAACTATGATGCTTTTAGTAGTATCATGATCGGATTT
TATCTGGAAATAAATTTGCTCTTTTAGGAATTAGGTGTAAACACATGATA
ACCAGTCAGTAGAACCAAATACTAATTTTTAACGTTCTTTCTTTGTTATT
AGATTTTTCTCTGAGGTGTGATTTGGTTGACACTATTATCGACCCAACAC
AAATCCCTAATGCAAGGAACTTTGTAAGTTTTGTTATTCCCTGGAAAGTT
CATATCAGTATAAGCTTATTGGAAGTTATCAAATTGGTTGATCATCCTGG
ATGATTACAACAAAAATTGTAAACACAGAAGCGTCTTGaatgaattttga
ttttataaaaatataagaaatataatgAAATCGCTTCTGTGTTTACAATT
TCTATTGGAAGTAGTAAGCTCCATAATCCGATGAAGCAACATTTAACAAA
CTATTTTAACTAGGTTTACATTTTCACTTGGTTTTACGTTTTAGTCTTTA
GAGACGAACATCAATTTCCATCTGACATGCAGTAAAAGTCGTCAAAAACC
AATCATTGCTGTGTTTAACTTACAACCCAAGAACTTTGTGGACATCGGTG
GTGTTTGTGAATCAGTCTTGTATGGCATCCCACGCATCATGAAACCGACC
AGTTGCTGGAAAATGGACTGGGACGAGCTAGAAAACAACCAATCACAGTT
CAATGCGTTAAATGCGTACATGAAAGACAAGGTATATTCAAATAAAACTT
TGGAGGAGTTCTATATATTGATCTTTTACCTTTATGTATAACAAGTCAAG
CGGTCACattcagtagcgtggtgggtcgagTAAAATTCGCGCAAATtggg
gaggcaattttagaagattttggtttttggcgccccctatgaaaagtaaa
tatctttttaaaactgccaaatctaaggtgtaaaagagcaaaggggCGCT
AAAATTAGTAAACAGAGGGGTCTATTTGCCCCCTTTTTAATTCGCCTCCC
CCCCCTCCCCAAGATAATCGGCCGGTGGGGGCACTGCCCCCCTGCCACTA
CGCTACTGGCCACATTCATAGAAATCTAATCCATTGTTGTGGCAGTCCAC
GAACctatgcaaaatattttttgattagtCTATGTCATACCCTTTTTCTC
ATCCTCCAACGAAAAGGTTTCTATTAGGAATATACGaaggaaaatttgag
taaatcaCTTGGGTGGAATAAGTATATACATTTCACACCTTTGGACATGA
ATGATATTTCCCACTCAGGGAATTTCTTGCATGTTCCAAGGTGCAAAATG
TTCTTCTCCCACCCattgattttctcattttttctgtgatagagAATGTA
AAGCCTGCAAATCAGACTACTGTAACTATGGCAGTGCTTTTTAGTTGCCC
AGTTTTACGAatattttctgatattttgcaccCATGCTAGGAATGGTAGT
TAGTTTCTTAAATCTTTAAGAATGTAGATCTCCACAGAACATTTCACAAa
gaaaatttatgcaaattttatGCATTTTCAAATTAGGCTGATACTTTCca
aatgtttattttatttaaatacTCTAGTCTTTGGCCTTGGTTCTCGAATC
CAAGGAGATCGGACCAATTCATTCGAATTTCTTGGTGTTACCATCAACAA
ATGGAACGATGTTGATCAAATCTATAGCTGTCAGGGATATCATGTTATCG
CACGCATCTGCTAATGCTACTAATGATCAAAGTCTTGATGGTgatgtcaa
agaaaaagtctGGAGCGACATGAATAAGGTGAGCCATCGTGGTTCGTCAT
CAATCACAATCAGGATAAAACTTTGTCAGAAGATGTCAATccaaattttc
atgaaaaatattttaaaaagttattaaTCTTAAGCATCCCGAGGTATGCG
AAAGTAtgatttaaaattaatttgttTCTAGTTTATATGTTTCTATTACC
GATGTATCAAGATcatttttctcaatattttatCTTTCAGATTCCAGTGA
TGAGTGACTACAACCCTTTCAATTATGTCAGCAACCTGTTCGAAACAGCA
TTGAACACAGCAACCAATTCAGCAGGTAGCAACAGGAAGAAAATAACAAA
CCAAACAGCAAGGAATATGGAACCGCCACCTAAGAAACCCAATGTTTCTT
ACTCAAATTTTGATAAACCTACAGCACGCGTAAGTCATTTTTGTGTGAAT
TACTTGTTTTTTTCTCGCAGCTTTCGTACAAGCTCTCCATTTTCGACTCG
AAGTCAGTAGATTTTTCCCAAGAAATCTAGCCTGAGAAAAGTCGAAGAGT
CGAGGTTTCTGTTCGAgatagtaagtaagtctgcgaccgcagtcggaggc
gacccgaaggctcctctttcgatagctatctacccgaaggtaggggaggg
cgccactctttctcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccactgtactacggtcgct
cGAGATAGAATAAGTTCGAGATAGAATAAGTTGAAGTACAGGATGACGGA
GGGCCAAAGTTGaaaactgttttgatttgaCCCATCATCATTTGTGTCGC
TTTTAAATATGGAAAATAAGACTTTCATTTTGTTATAAAAGTATTTGAAG
AGATGATTTGGTTTTAGACTGTGGAATTCTTTAATAAAGTTGCAAATTTA
TCATCATCTTATCTCATTCTCTACAGACCATGCCTCAACCAGCATCTGTT
CGTCAAATCAAGCCGTTCTCGCCATGGCATGCCGCTCCCTGTGTCAACAA
TGACGATATCGGTCACGTGACAACCAATGACGTCATTCCTCCATACACAT
CGGCATTTTCATCAGCATCTAACCAAGGGAAAAAGAGAAAACCTCGTTTC
GAACCACCTCGAGGTTACAAGCAAACAAAACATTAAGAAAACCAGGGTCT
CTCAGTGAATTGCAAAATGGTGACGGtgtattttttggaaattggaCCCT
GTTAAAAAGCTGTATGATGTAGTGGTACAT

Coding sequence (CDS) from alignment at scaffold_314:396655..403784+

>TCONS_00058830 ID=TCONS_00058830|Name=TCONS_00058830|organism=Clytia hemisphaerica|type=CDS|length=2772bp|location=Sequence derived from alignment at scaffold_314:396655..403784+ (Clytia hemisphaerica)
ATGAAACCGACCAGTTGCTGGAAAATGGACTGGGACGAGCTAGAAAACAA
CCAATCACAGTTCAATGCGTTAAATGCGTACATGAAAGACAAGTCTTTGG
CCTTGGTTCTCGAATCCAAGGAGATCGGACCAATTCATTCGAATTTCTTG
GTGTTACCATCAACAAATGGAACGATGTTGATCAAATCTATAGCTGTCAG
GGATATCATGTTATCGCACGCATCTGCTAATGCTACTAATGATCAAAGTC
TTGATGGTgatgtcaaagaaaaagtctGGAGCGACATGAATAAGATTCCA
GTGATGAGTGACTACAACCCTTTCAATTATGTCAGCAACCTGTTCGAAAC
AGCATTGAACACAGCAACCAATTCAGCAGGTAGCAACAGGAAGAAAATAA
CAAACCAAACAGCAAGGAATATGGAACCGCCACCTAAGAAACCCAATGTT
TCTTACTCAAATTTTGATAAACCTACAGCACGCACCATGCCTCAACCAGC
ATCTGTTCGTCAAATCAAGCCGTTCTCGCCATGGCATGCCGCTCCCTGTG
TCAACAATGACGATATCGGTCACGTGACAACCAATGACGTCATTCCTCCA
TACACATCGGCATTTTCATCAGCATCTAACCAAGGGAAAAAGAGAAAACC
TCGTTTCGAACCACCTCGAGGTTACAAGCAAACAAAACATTAAATGAAAC
CGACCAGTTGCTGGAAAATGGACTGGGACGAGCTAGAAAACAACCAATCA
CAGTTCAATGCGTTAAATGCGTACATGAAAGACAAGTCTTTGGCCTTGGT
TCTCGAATCCAAGGAGATCGGACCAATTCATTCGAATTTCTTGGTGTTAC
CATCAACAAATGGAACGATGTTGATCAAATCTATAGCTGTCAGGGATATC
ATGTTATCGCACGCATCTGCTAATGCTACTAATGATCAAAGTCTTGATGG
TgatgtcaaagaaaaagtctGGAGCGACATGAATAAGATTCCAGTGATGA
GTGACTACAACCCTTTCAATTATGTCAGCAACCTGTTCGAAACAGCATTG
AACACAGCAACCAATTCAGCAGGTAGCAACAGGAAGAAAATAACAAACCA
AACAGCAAGGAATATGGAACCGCCACCTAAGAAACCCAATGTTTCTTACT
CAAATTTTGATAAACCTACAGCACGCACCATGCCTCAACCAGCATCTGTT
CGTCAAATCAAGCCGTTCTCGCCATGGCATGCCGCTCCCTGTGTCAACAA
TGACGATATCGGTCACGTGACAACCAATGACGTCATTCCTCCATACACAT
CGGCATTTTCATCAGCATCTAACCAAGGGAAAAAGAGAAAACCTCGTTTC
GAACCACCTCGAGGTTACAAGCAAACAAAACATTAAATGAAACCGACCAG
TTGCTGGAAAATGGACTGGGACGAGCTAGAAAACAACCAATCACAGTTCA
ATGCGTTAAATGCGTACATGAAAGACAAGTCTTTGGCCTTGGTTCTCGAA
TCCAAGGAGATCGGACCAATTCATTCGAATTTCTTGGTGTTACCATCAAC
AAATGGAACGATGTTGATCAAATCTATAGCTGTCAGGGATATCATGTTAT
CGCACGCATCTGCTAATGCTACTAATGATCAAAGTCTTGATGGTgatgtc
aaagaaaaagtctGGAGCGACATGAATAAGATTCCAGTGATGAGTGACTA
CAACCCTTTCAATTATGTCAGCAACCTGTTCGAAACAGCATTGAACACAG
CAACCAATTCAGCAGGTAGCAACAGGAAGAAAATAACAAACCAAACAGCA
AGGAATATGGAACCGCCACCTAAGAAACCCAATGTTTCTTACTCAAATTT
TGATAAACCTACAGCACGCACCATGCCTCAACCAGCATCTGTTCGTCAAA
TCAAGCCGTTCTCGCCATGGCATGCCGCTCCCTGTGTCAACAATGACGAT
ATCGGTCACGTGACAACCAATGACGTCATTCCTCCATACACATCGGCATT
TTCATCAGCATCTAACCAAGGGAAAAAGAGAAAACCTCGTTTCGAACCAC
CTCGAGGTTACAAGCAAACAAAACATTAAATGAAACCGACCAGTTGCTGG
AAAATGGACTGGGACGAGCTAGAAAACAACCAATCACAGTTCAATGCGTT
AAATGCGTACATGAAAGACAAGTCTTTGGCCTTGGTTCTCGAATCCAAGG
AGATCGGACCAATTCATTCGAATTTCTTGGTGTTACCATCAACAAATGGA
ACGATGTTGATCAAATCTATAGCTGTCAGGGATATCATGTTATCGCACGC
ATCTGCTAATGCTACTAATGATCAAAGTCTTGATGGTgatgtcaaagaaa
aagtctGGAGCGACATGAATAAGATTCCAGTGATGAGTGACTACAACCCT
TTCAATTATGTCAGCAACCTGTTCGAAACAGCATTGAACACAGCAACCAA
TTCAGCAGGTAGCAACAGGAAGAAAATAACAAACCAAACAGCAAGGAATA
TGGAACCGCCACCTAAGAAACCCAATGTTTCTTACTCAAATTTTGATAAA
CCTACAGCACGCACCATGCCTCAACCAGCATCTGTTCGTCAAATCAAGCC
GTTCTCGCCATGGCATGCCGCTCCCTGTGTCAACAATGACGATATCGGTC
ACGTGACAACCAATGACGTCATTCCTCCATACACATCGGCATTTTCATCA
GCATCTAACCAAGGGAAAAAGAGAAAACCTCGTTTCGAACCACCTCGAGG
TTACAAGCAAACAAAACATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037067XLOC_037067Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058830-exon-scaffold_314-1491911889:396655..396714TCONS_00058830-exon-scaffold_314-1491911889:396655..396714Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:396655..396714TCONS_00058830-exon-scaffold_314-1510915933:396655..396714Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:396655..396714TCONS_00058830-exon-scaffold_314-1575043694:396655..396714Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:396974..397015TCONS_00058830-exon-scaffold_314-1491911889:396974..397015Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:396974..397015TCONS_00058830-exon-scaffold_314-1510915933:396974..397015Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:396974..397015TCONS_00058830-exon-scaffold_314-1575043694:396974..397015Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:397286..397443TCONS_00058830-exon-scaffold_314-1491911889:397286..397443Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:397286..397443TCONS_00058830-exon-scaffold_314-1510915933:397286..397443Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:397286..397443TCONS_00058830-exon-scaffold_314-1575043694:397286..397443Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:397660..397777TCONS_00058830-exon-scaffold_314-1491911889:397660..397777Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:397660..397777TCONS_00058830-exon-scaffold_314-1510915933:397660..397777Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:397660..397777TCONS_00058830-exon-scaffold_314-1575043694:397660..397777Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:398322..398392TCONS_00058830-exon-scaffold_314-1491911889:398322..398392Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:398322..398392TCONS_00058830-exon-scaffold_314-1510915933:398322..398392Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:398322..398392TCONS_00058830-exon-scaffold_314-1575043694:398322..398392Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:398659..398775TCONS_00058830-exon-scaffold_314-1491911889:398659..398775Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:398659..398775TCONS_00058830-exon-scaffold_314-1510915933:398659..398775Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:398659..398775TCONS_00058830-exon-scaffold_314-1575043694:398659..398775Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:399353..399418TCONS_00058830-exon-scaffold_314-1491911889:399353..399418Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:399353..399418TCONS_00058830-exon-scaffold_314-1510915933:399353..399418Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:399353..399418TCONS_00058830-exon-scaffold_314-1575043694:399353..399418Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:400382..400468TCONS_00058830-exon-scaffold_314-1491911889:400382..400468Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:400382..400468TCONS_00058830-exon-scaffold_314-1510915933:400382..400468Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:400382..400468TCONS_00058830-exon-scaffold_314-1575043694:400382..400468Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:401056..401285TCONS_00058830-exon-scaffold_314-1491911889:401056..401285Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:401056..401285TCONS_00058830-exon-scaffold_314-1510915933:401056..401285Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:401056..401285TCONS_00058830-exon-scaffold_314-1575043694:401056..401285Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:402132..402332TCONS_00058830-exon-scaffold_314-1491911889:402132..402332Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:402132..402332TCONS_00058830-exon-scaffold_314-1510915933:402132..402332Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:402132..402332TCONS_00058830-exon-scaffold_314-1575043694:402132..402332Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:402545..402733TCONS_00058830-exon-scaffold_314-1491911889:402545..402733Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:402545..402733TCONS_00058830-exon-scaffold_314-1510915933:402545..402733Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:402545..402733TCONS_00058830-exon-scaffold_314-1575043694:402545..402733Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1491911889:403481..403784TCONS_00058830-exon-scaffold_314-1491911889:403481..403784Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1510915933:403481..403784TCONS_00058830-exon-scaffold_314-1510915933:403481..403784Clytia hemisphaericaexon
TCONS_00058830-exon-scaffold_314-1575043694:403481..403784TCONS_00058830-exon-scaffold_314-1575043694:403481..403784Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058830-proteinTCONS_00058830-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:396655..403784 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.40515	2.00249	1.49216	1.30167	2.88175	3.49544	1.075	2.16262	1.2122	0.451577	1.11289	0.530945	1.31061	2.36641	0.646447	0.590237	1.07471	1.7371	0.188911	0.443464	1.15724	0.938819	0.872447	1.0107	4.65859	5.52531	1.01581	1.07541	0.980265	0.721816
Blast
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BLAST of TCONS_00058830 vs. Swiss-Prot (Human)
Match: M1AP (Meiosis 1 arrest protein OS=Homo sapiens GN=M1AP PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.434e-22
Identity = 65/254 (25.59%), Postives = 121/254 (47.64%), Query Frame = 2 
Query:  593 ILCGYVETRYLENDKVNLEQYFRSWLKDSSGSDEVHLTITFNETNINFHLTCSKSRQKPIIAVFNLQPK----------------------NFVDI----------------------GGVCESVLYGIPRIMKPTSCWKMDWDELENNQSQFNALNAYMKDKSLALVLESKEIGPIHSN-------FLVLPSTNGTMLIKSIAVRDIMLSHASANATNDQSLDGDVKEKVWSDMNKIPVMSDYNPFNYVSNLF 1201
            IL   ++ + ++ND V++E +F++WL +S G+D+  + +  +    +     S+ R  P+    +LQ +                      +F+ +                       G+CES+ YG+P I++PTSCW++DWDELE NQ  F+AL   +  +   L+ + +  GP HS        ++++PS + T+L+K++A R++ML         D     D  + V S ++ + +   YNP +  S+L+
Sbjct:  202 ILGTDIDLQTIDNDIVSMEIFFKAWLHNS-GTDQEQIHLLLSSQCFS---NISRPRDNPMCLKCDLQERLLCPSLLAGTADGSLRMDDPKGDFITLYQMASQSSASHYKLQVIKALKSSGLCESLTYGLPFILRPTSCWQLDWDELETNQQHFHALCHSLLKREWLLLAKGEPPGPGHSQRIPASTFYVIMPSHSLTLLVKAVATRELMLPSTFPLLPEDP--HDDSLKNVESMLDSLELEPTYNPLHVQSHLY 449
The following BLAST results are available for this feature:
BLAST of TCONS_00058830 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M1AP3.434e-2225.59Meiosis 1 arrest protein OS=Homo sapiens GN=M1AP P... [more]
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