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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058755 ID=TCONS_00058755|Name=TCONS_00058755|organism=Clytia hemisphaerica|type=transcript|length=1186bp
CACATTACAGCTTGTGGGGATGACAACCTTTAAATAAACCTTCGAATCAT
AACGATAAGGCACTCGTCAACCGTAATAAAGGAAACTAAGGAGGATGGAA
AACGGATATTGTGAATCTGAGGGTAGTGATTCTGACGAGTTTAGTTACGA
TTGCGATGACGGAGAAAATTATTCTGATGAAATCAATCCACCGGCAGTCG
ATTTTGCTTCCAAATGCATTCTCAAATTTTTCGATGGAGTAGAGAACAAA
CCAGGAATTGACTCTTTTATAAATGCTTCACGCAAATGGACAGAGATTGA
CCCGAGTGACGGCTATGATAGAATTCGGAATTGGCGTGATGATACCCCTC
TAATAGCTGCTGTGCGAAATGGTCATTTTGAAGTCGTCCGTCGTTTATTA
GTACTTGGTGCTGATCCAACACTTTGGTGTCGACATTATGACCAAAATGA
ATGGGCGTCTAGTATTGCTTTAAGGCGTTTTGAATCTTTCAACGAAGAGA
GAGACCGTTACCTTCAAGGTGATTTTCCGCCGTTTAGTTCATTCAGGGGA
GAAAAACTTGACCCAGAGATACTTGCTTTGGATAACCTATACAGAACTAA
CGAATTCCAGAATATCATCGTTGTTTTGAGAATAGCTGAGCAGTACTGGG
AACGAGCTAGTTATTATCCATTTGGTGATATAACCTGGGGACGCGATAAA
GAATTGCTCAAATGTCCCAATAAACCTTCTAATGAGACAGAAATGAGAAG
AAAGTTGAATGGAGTTATTCGATCACTGCCCGATATGAGACGACTAGAGC
CCCTTGCACAAGCCATTGTTCaatttaggaaaaagaaagAGTCTGAACGT
TTGTTGGCCATCAATTCTTCTTTGCAACAGTTGTTATCAANTCATCTGGT
GATATAACCTGGGGACGCGATAAAGAATTGGTCAAATGTCCCAATAAACC
TTCTAATGAGACAGAAATGAGAAGAAAGTTGAATAGAGTTATTCGATCAC
TGCCTGATATGAGACGACTAAAGCCCCTTGCACAAGCCATTGTTCaattt
aggaaaaagaaagAGTCTGAACGTTTGTTGGCCATCAATTCTTCTTTGCA
ACAGTTGTTATCAACGGATGAAGATAATACTTTGAGCTCAGATTATCCAG
AAAATGGAGCAGCAGCGAACACCGGTAacttttttc Run BLAST on NCBI transcript from alignment at scaffold_313:466318..468534- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058755 ID=TCONS_00058755|Name=TCONS_00058755|organism=Clytia hemisphaerica|type=transcript|length=2217bp|location=Sequence derived from alignment at scaffold_313:466318..468534- (Clytia hemisphaerica)
CACATTACAGCTTGTGGGGATGACAACCTTTAAATAAACCTTCGAATCAT
AACGATAAGGGTAAGAATAACTTATTGATGTCAAGTACAATCCGTCACTT
CTCTGATCAAATTCAAAATGATATCCCGTCTACTAGCAAAAGGTCTATGT
AGATGACATTATCCTCTATTAGGCGAGACCAATTTAATTTCTTGTTCTAC
GGGCCCGTCCGACCCTATTTTTGCTAAAATCAAAAAAATAATAATATTGA
ATTTCCACTACATAATATTTTACACACTAGTTATTTGTAAAAATCAAATT
TGAATAAAGCTGAAAATTAATTCAAGAAATGAAATGAAAAATTTATTCTT
ATTTTACCGACCGACCGACCGACCGACCCATATTTTGCTAACGATCTGCC
CGTAGAACAACAAATTAAATTGGTCTCGCCTTAGTGATAGTAAAACGTGG
CAAAAAACCCTTAGAGTTTAGTAGAGCCCAAACCTTGCATGTCTGAATTC
CAGACCCAAAAATGTTTCTATGTGCAATCCTATTGCTGTTTTTAGCACTC
GTCAACCGTAATAAAGGAAACTAAGGAGGATGGGTAAGCTGAATTTTCAA
GTTAAAAGCGCATTTGTATATTTCAATACAAAGTAGATGATTCAGACGTG
CTAGTTGATTTTAAGTTCTGCATTCTCATGATAATTCACAATTATCAATT
TCGATTCCTTCGAATCCCATTTTTACTCGCAAAGTTCACGTTACAAATTT
TCTGGTTGGCCAAGTAGAAAACGTCTAATTACGTTTTTACAAGAAAGATT
AAATGTTCTTAATATCGTTGTTTTTTTCTATTTTCTTATTACATTATTGG
GCTCTTCCAGAAAAAAAATTGAATATGGGGGTGGATGATGTAACAATTTT
CAGTGACTTACCCCCCGGACAAAGTGACTTTTGGCCCCCCAGACAAGCAT
CAGTTGACCCCCGGACAACCCAAATTACCCCCGGACAGAGCAAATTTACC
CCCCGGACAAGGAAAATTTTGTTGATTTTTCGCTACCACACGGACAATAG
TACGGACATTTTCTGGAAGAGCCCATTAGCCTTTAGATAGGTCCAGCTGA
ATATTTTCTTTTTTTTATTCTCTTCCAAGAAAACGGATATTGTGAATCTG
AGGGTAGTGATTCTGACGAGTTTAGTTACGATTGCGATGACGGAGAAAAT
TATTCTGATGAAATCAATCCACCGGCAGTCGATTTTGCTTCCAAATGCAT
TCTCAAATTTTTCGATGGAGTAGAGAACAAACCAGGAATTGACTCTTTTA
TAAATGCTTCACGCAAATGGACAGAGATTGACCCGAGTGACGGCTATGAT
AGAATTCGGAATTGGCGTGATGATACCCCTCTAATAGCTGCTGTGCGAAA
TGGTCATTTTGAAGTCGTCCGTCGTTTATTAGTACTTGGTGCTGATCCAA
CACTTTGGTGTCGACATTATGACCAAAATGAATGGGCGTCTAGTATTGCT
TTAAGGCGTTTTGAATCTTTCAACGAAGAGAGAGACCGTTACCTTCAAGG
TGATTTTCCGCCGTTTAGTTCATTCAGGGGAGAAAAACTTGACCCAGAGA
TACTTGCTTTGGATAACCTATACAGAACTAACGAATTCCAGAATATCATC
GTTGTTTTGAGAATAGCTGAGCAGTACTGGGAACGAGCTAGTTATTATCC
ATTTGGTGATATAACCTGGGGACGCGATAAAGAATTGCTCAAATGTCCCA
ATAAACCTTCTAATGAGACAGAAATGAGAAGAAAGTTGAATGGAGTTATT
CGATCACTGCCCGATATGAGACGACTAGAGCCCCTTGCACAAGCCATTGT
TCAATTTAGGAAAAAGAAAGAGTCTGAACGTTTGTTGGCCATCAATTCTT
CTTTGCAACAGTTGTTATCAANTCATCTGGTGATATAACCTGGGGACGCG
ATAAAGAATTGGTCAAATGTCCCAATAAACCTTCTAATGAGACAGAAATG
AGAAGAAAGTTGAATAGAGTTATTCGATCACTGCCTGATATGAGACGACT
AAAGCCCCTTGCACAAGCCATTGTTCAATTTAGGAAAAAGAAAGAGTCTG
AACGTTTGTTGGCCATCAATTCTTCTTTGCAACAGTTGTTATCAACGGAT
GAAGATAATACTTTGAGCTCAGATTATCCAGAAAATGGAGCAGCAGCGAA
CACCGGTAACTTTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058755-exon-scaffold_313-1575043694:468475..468534 | TCONS_00058755-exon-scaffold_313-1575043694:468475..468534 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1575043694:467952..467989 | TCONS_00058755-exon-scaffold_313-1575043694:467952..467989 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1575043694:466318..467405 | TCONS_00058755-exon-scaffold_313-1575043694:466318..467405 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1510915933:468475..468534 | TCONS_00058755-exon-scaffold_313-1510915933:468475..468534 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1510915933:467952..467989 | TCONS_00058755-exon-scaffold_313-1510915933:467952..467989 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1510915933:466318..467405 | TCONS_00058755-exon-scaffold_313-1510915933:466318..467405 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1491911889:468475..468534 | TCONS_00058755-exon-scaffold_313-1491911889:468475..468534 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1491911889:467952..467989 | TCONS_00058755-exon-scaffold_313-1491911889:467952..467989 | Clytia hemisphaerica | exon |
| TCONS_00058755-exon-scaffold_313-1491911889:466318..467405 | TCONS_00058755-exon-scaffold_313-1491911889:466318..467405 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_313 | supercontig | scaffold_313:466318..468534 - |
Blast
The following BLAST results are available for this feature:
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