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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058731 ID=TCONS_00058731|Name=TCONS_00058731|organism=Clytia hemisphaerica|type=transcript|length=1151bp
GGAACTGTCTGGACGTTGTTactttcttgttattttttttaatcaactgA
TATGTCTCCAATGCTTCTTATTTTGTCGAACATTTGAAGGTTTTGCTGTG
CTATGTTTTTCATGGCTCGTTTTTAACAATCTAGAAAACTCCGTCTTATT
tcttaaagctttaaaatctcAACCATTTCCATTGGTGGATTGATTGAATG
AAAACGAATTTTAACATATCTTAAAAGTTTTCTCTCGTTTAAGATCACAA
TCTACGATGCCCCGCTGCTTCTCTTGAATACAAATGGTGAAATAATATGC
CCCGCATTCAAAATGCTAACGAAAGAACTGCATTACTAGCTACCCAAGAA
ATAGCTTATGACGTGAAGCAATATGGAAACCAAGTCAAGTTAAGGAGTAG
CGTCTATGCACACACCAATCATTATATCAAGCAAAGCAGACCGTTTTTCA
ATGGTAAACGTTTGTGTGGATATGTGTATTTTCAAGGAATGAGATGGATT
TTAGCAGTCCTTTTCCTCGTCAACTTGTTTTGTTTCGATAGCTTGTACGT
AGGTTTAGTTATGGACTTTTGTAACTTAGTATTTTTGTTGATCTTCTTGC
AACACATGTGTGTTAACTGTTGCACGATGAGGCTAGTTCGTCAACAGCCT
GTTATCCCAGAACAAAAATTAAGTAATAATTTCTACAAAGTTTCAATCGT
TGAGATGACTGGAGTCTTTGCGGTCAATTATCAACAAAATATCGGCGCGT
TGAAATTGAACGAACAAGAGGTCAAAATGCAAGCTTTTAATAGCGTTGCT
GAAATGTTTATGAATCATGCTCAGAGATACTCCAACATCTGTTTCCTTGT
GGTGATATGTATGTCAGGAAACAGTGCATATTTCACTTATCGCAAATGGG
GTGAGTTGGGATTGAATCAGCAGTTTATGTTCATGAGAAGTTTATTTCGA
TGATTGTAtttacttttgttttattttatcatAGCCTCTTGAAACCAATG
TATTTGACACACACACAGGTTTTAATCATTGCCTCCATCCATCACACACG
GGCTTTGATTACTGCCTCCATCGAGTTCAGTGTCTGTGTCCAgctccaaa
actctaccgccacttttttcccgtaaaccgccctgacgccctaactcttt
c Run BLAST on NCBI transcript from alignment at scaffold_313:582637..583787+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058731 ID=TCONS_00058731|Name=TCONS_00058731|organism=Clytia hemisphaerica|type=transcript|length=1151bp|location=Sequence derived from alignment at scaffold_313:582637..583787+ (Clytia hemisphaerica)
GGAACTGTCTGGACGTTGTTactttcttgttattttttttaatcaactgA
TATGTCTCCAATGCTTCTTATTTTGTCGAACATTTGAAGGTTTTGCTGTG
CTATGTTTTTCATGGCTCGTTTTTAACAATCTAGAAAACTCCGTCTTATT
tcttaaagctttaaaatctcAACCATTTCCATTGGTGGATTGATTGAATG
AAAACGAATTTTAACATATCTTAAAAGTTTTCTCTCGTTTAAGATCACAA
TCTACGATGCCCCGCTGCTTCTCTTGAATACAAATGGTGAAATAATATGC
CCCGCATTCAAAATGCTAACGAAAGAACTGCATTACTAGCTACCCAAGAA
ATAGCTTATGACGTGAAGCAATATGGAAACCAAGTCAAGTTAAGGAGTAG
CGTCTATGCACACACCAATCATTATATCAAGCAAAGCAGACCGTTTTTCA
ATGGTAAACGTTTGTGTGGATATGTGTATTTTCAAGGAATGAGATGGATT
TTAGCAGTCCTTTTCCTCGTCAACTTGTTTTGTTTCGATAGCTTGTACGT
AGGTTTAGTTATGGACTTTTGTAACTTAGTATTTTTGTTGATCTTCTTGC
AACACATGTGTGTTAACTGTTGCACGATGAGGCTAGTTCGTCAACAGCCT
GTTATCCCAGAACAAAAATTAAGTAATAATTTCTACAAAGTTTCAATCGT
TGAGATGACTGGAGTCTTTGCGGTCAATTATCAACAAAATATCGGCGCGT
TGAAATTGAACGAACAAGAGGTCAAAATGCAAGCTTTTAATAGCGTTGCT
GAAATGTTTATGAATCATGCTCAGAGATACTCCAACATCTGTTTCCTTGT
GGTGATATGTATGTCAGGAAACAGTGCATATTTCACTTATCGCAAATGGG
GTGAGTTGGGATTGAATCAGCAGTTTATGTTCATGAGAAGTTTATTTCGA
TGATTGTAtttacttttgttttattttatcatAGCCTCTTGAAACCAATG
TATTTGACACACACACAGGTTTTAATCATTGCCTCCATCCATCACACACG
GGCTTTGATTACTGCCTCCATCGAGTTCAGTGTCTGTGTCCAgctccaaa
actctaccgccacttttttcccgtaaaccgccctgacgccctaactcttt
c
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058731-exon-scaffold_313-1491911889:582637..583787 | TCONS_00058731-exon-scaffold_313-1491911889:582637..583787 | Clytia hemisphaerica | exon |
| TCONS_00058731-exon-scaffold_313-1510915933:582637..583787 | TCONS_00058731-exon-scaffold_313-1510915933:582637..583787 | Clytia hemisphaerica | exon |
| TCONS_00058731-exon-scaffold_313-1575043694:582637..583787 | TCONS_00058731-exon-scaffold_313-1575043694:582637..583787 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_313 | supercontig | scaffold_313:582637..583787 + |
Blast
The following BLAST results are available for this feature:
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