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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058711 ID=TCONS_00058711|Name=TCONS_00058711|organism=Clytia hemisphaerica|type=transcript|length=1051bp
agagaagagaaaaaagtTACCGGTGTTCGCTGCTGCTCCATTTTCTGGAT
AATCTGAGCTCAAAGTATTATCTTCATCCGTTGATAACAACTGTTGCAAA
GAAGAATTGATGGCCAACAAACGTTCAGACTctttctttttcctaaattG
AACAATGGCTTGTGCAAGGGGCTTTAGTCGTCTCATATCAGGCAGTGATC
GAATAACTCTATTCAACTTTCTTCTCATTTCTGTCTCATTAGAAGGTTTA
TTGGGACATTTGACCAATTCTTTATCGCGTCCCCAGGTTATATCACCAAA
TGGATAATAACTAGCTCGTTCCCAGTACTGCTCAGCTATTCTCAAAACAA
CGATGATATTCTGGAATTCGTTAGTTCTGTATAGGTTATCCAAAGCAAGT
ATCTCTGGGTCAAGTTTTTCTCCCCTGAATGAACTAAACGGCGGAAAATC
ACCTTGAAGGTAACGGTCTCTCTCTTCGTTGAAAGATTCAAAACGCCTTA
AAGCAATACTAGACGCCCATTCATTTTGGTCATAATGTCGACACCAAAGT
GTTGGATCAGCACCAAGTACTAATAAACGACGGACGACTTCAAAATGACC
ATTTCGCACAGCAGCTATTAGAGGGGTATCATCACGCCAATTCCGAATTC
TATCATAGCCGTCACTCGGGTCAATCTCTGTCCATTTGCGTGAAGCATTT
ATAAAAGAGTCAATTCCTGGTTTGTTCTCTACTCCATCGAAAAATTTGAG
AATGCATTTGGAAGCAAAATCGACTGCCGGTGGATTGATTTCATCAGAAT
AATTTTCTCCGTCATCGCAATCGTAACTAAACTCGTCAGAATCACTACCC
TCAGATTCACAATATCCGTTTTCTTGGAagagaataaaaaaaagaaaata
ttcagCTGGACCTATCTAAAGgctaatgggctcttccagaaaatgtccgt
actaTTGTCCGTGtggtagcgaaaaatcaacaaaattttccttgtccggg
gggtaaatttgctctgtccgggggtaatttgggttgtccgggggtcaact
g Run BLAST on NCBI transcript from alignment at scaffold_313:466310..467584+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058711 ID=TCONS_00058711|Name=TCONS_00058711|organism=Clytia hemisphaerica|type=transcript|length=1275bp|location=Sequence derived from alignment at scaffold_313:466310..467584+ (Clytia hemisphaerica)
agagaagagaaaaaagtTACCGGTGTTCGCTGCTGCTCCATTTTCTGGAT
AATCTGAGCTCAAAGTATTATCTTCATCCGTTGATAACAACTGTTGCAAA
GAAGAATTGATGGCCAACAAACGTTCAGACTctttctttttcctaaattG
AACAATGGCTTGTGCAAGGGGCTTTAGTCGTCTCATATCAGGCAGTGATC
GAATAACTCTATTCAACTTTCTTCTCATTTCTGTCTCATTAGAAGGTTTA
TTGGGACATTTGACCAATTCTTTATCGCGTCCCCAGGTTATATCACCAGA
TGANTTGATAACAACTGTTGCAAAGAAGAATTGATGGCCAACAAACGTTC
AGACTctttctttttcctaaattGAACAATGGCTTGTGCAAGGGGCTCTA
GTCGTCTCATATCGGGCAGTGATCGAATAACTCCATTCAACTTTCTTCTC
ATTTCTGTCTCATTAGAAGGTTTATTGGGACATTTGAGCAATTCTTTATC
GCGTCCCCAGGTTATATCACCAAATGGATAATAACTAGCTCGTTCCCAGT
ACTGCTCAGCTATTCTCAAAACAACGATGATATTCTGGAATTCGTTAGTT
CTGTATAGGTTATCCAAAGCAAGTATCTCTGGGTCAAGTTTTTCTCCCCT
GAATGAACTAAACGGCGGAAAATCACCTTGAAGGTAACGGTCTCTCTCTT
CGTTGAAAGATTCAAAACGCCTTAAAGCAATACTAGACGCCCATTCATTT
TGGTCATAATGTCGACACCAAAGTGTTGGATCAGCACCAAGTACTAATAA
ACGACGGACGACTTCAAAATGACCATTTCGCACAGCAGCTATTAGAGGGG
TATCATCACGCCAATTCCGAATTCTATCATAGCCGTCACTCGGGTCAATC
TCTGTCCATTTGCGTGAAGCATTTATAAAAGAGTCAATTCCTGGTTTGTT
CTCTACTCCATCGAAAAATTTGAGAATGCATTTGGAAGCAAAATCGACTG
CCGGTGGATTGATTTCATCAGAATAATTTTCTCCGTCATCGCAATCGTAA
CTAAACTCGTCAGAATCACTACCCTCAGATTCACAATATCCGTTTTCTTG
GAagagaataaaaaaaagaaaatattcagCTGGACCTATCTAAAGgctaa
tgggctcttccagaaaatgtccgtactaTTGTCCGTGtggtagcgaaaaa
tcaacaaaattttccttgtccggggggtaaatttgctctgtccgggggta
atttgggttgtccgggggtcaactg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058711-exon-scaffold_313-1491911889:466310..466595 | TCONS_00058711-exon-scaffold_313-1491911889:466310..466595 | Clytia hemisphaerica | exon |
| TCONS_00058711-exon-scaffold_313-1510915933:466310..466595 | TCONS_00058711-exon-scaffold_313-1510915933:466310..466595 | Clytia hemisphaerica | exon |
| TCONS_00058711-exon-scaffold_313-1575043694:466310..466595 | TCONS_00058711-exon-scaffold_313-1575043694:466310..466595 | Clytia hemisphaerica | exon |
| TCONS_00058711-exon-scaffold_313-1491911889:466820..467584 | TCONS_00058711-exon-scaffold_313-1491911889:466820..467584 | Clytia hemisphaerica | exon |
| TCONS_00058711-exon-scaffold_313-1510915933:466820..467584 | TCONS_00058711-exon-scaffold_313-1510915933:466820..467584 | Clytia hemisphaerica | exon |
| TCONS_00058711-exon-scaffold_313-1575043694:466820..467584 | TCONS_00058711-exon-scaffold_313-1575043694:466820..467584 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_313 | supercontig | scaffold_313:466310..467584 + |
Blast
The following BLAST results are available for this feature:
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