TCONS_00058658 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058658
Unique NameTCONS_00058658
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2871

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058658 ID=TCONS_00058658|Name=TCONS_00058658|organism=Clytia hemisphaerica|type=transcript|length=2871bp
CAGTAAGTggcaatgatgaaatttttaacgGAAGGCGATATTTCTTTGGT
TCCACAAATAAAACATGGCAAGGCGCCGAAAATGATTGTATTGGACGTGG
AGGTCATCTAACTAGCGTACATTCCAAGGCTGAGAACGATTTCTTAACCC
AGCAAATCGTTTCCAGGGGAGGTGTAAGCAATTGGTATGGAGGAATCAGA
GTAAACAATATTTTTACTTGGTCCGATAAAACACCTTTTACGACAACATT
TTGGGGCCCTGGAGAGCCAAATGGTTTATTAGGAGAAGACTGTTTGCATA
TGAATACTGATCATCTTGGACAGTGGAATGATCTTCCCTGTAATGTTGAG
TTTCCGTATGTTTGCAAGTTAGCCAACAATTTACCACTCAAAAATTGTAA
GCTTGACCTTGGTGCACTACTAGATGATTCTGGGTCAATTGGTTCCGAAA
CTGAATTCCGTAAAGAAACAAACTTTATCAAAAGTTTGGCAAAAGACTTA
ACAATCGGGCCATCAAACACGCGTGTTTCAGTGATCAAGTTTTCAACAAA
TGCACGTTTGGAATTCAAATTTAATGATATTGAAGGACAGGATCGCACAG
CATTATATAATGCATTGGATGGTTTGAGTTGGGATGGCGATCTTACGTAT
ACTGTTGATGCTTTAGAGCTTGCtcaaaaagaaatgttttcgGAAGCTAA
TGGACAAcgtaaaaatgtttcaaagGTCTTGTTAGTTGTGACAGATGGGA
AAAGTACCAGTGGTGTTCAAGCTGTCCAAAGAGCATCTGATGTTCTCAGT
AAACAAGGAGTGAACATTATCCCAATTGGAATTGGAAACGTTGATCAATC
TGAGTTAGAAGCTATGGCAACCAACAAATCAAACGTGTTTTATGTGAACA
ACCTATCGGAATTGGAGTCTGCTGTATGGGGTGTCCTAGAAGCAAAATGC
ACACCCATTAAATGTCATTACAAGAAATGCATCTACAGTGGCTGGTCCTC
GTGGTCCGCAACATGTGGATTGATAGCAGATCGATCGCGTTCATTGACGA
GATCGGAAGATGCTGTTGAAGAAAGGTTTGGTGGTTGCGCTGGTCTACCG
ACAACTTGTGAAAACCGTGAAATTGAAACTATAACTTTGAACAGTTGTCC
GTATACAACGCTGGCTCCACCAACTCAGACACAACCTACACCATCTCTGG
TCAAGTGGGGCTCAaATGAATATTACTTCAGTGATGTCAAAGTGACTTGG
TTTGAGGCTGAAAGATTATGTATTGCTCGTGGAGGAACTCTGGCAACAAT
CCTATCTCTAGAAGAAGATGATTTTATGCTTAATCAACTGACCAAAAGGA
AGCCCTTTAACGAAAGAACTATTAGTTATTGGTTAGATGGCGTTAAAAGG
AATATGAAATATGTTTGGAATGATGGATCAGAGATGATTTATAAAAATCT
TGGTGGTGGCAGAGCAGATGAAGATAGTTACACTGAAGGATGTGTTTCCG
TCATGTATGGACCGGGTTTTCTTGTTCCCGAGCCTTACTCTTGGTTGAAA
GGTTCTTGTACAAATTATGGATACCCAATACAATACGTTTGNGACCGGGT
TTTCTTGTTCCCGAGCCTTACTCTTGGTTGAAAGGTTCTTGTACGAATGA
TGGATACCCAATACAATACGTTTGCAAAGGAAAAAATCTCAATGATTCGC
CTACAATTACGACAACAACCACGATCGCACCAACCACACCATCACAACCT
TTGCCATCCTTGGTGACTTGGGGAGCAATGCAATATTTCTTCAGCGATGA
AAAACTGAACTGGTCAGAATCGCAACAAAAATGTACTGATCTTGGAGGAA
CCCTTGCAACAATCTTCTCACAAGACGAAGACGATTTTATTCGTGGCCAG
TTGCGCGATAGAAAATCACCATCTGACCGTTCTATCAACTACTGGCTTGA
TGGTGTCAAAAAGGATACGAAATATGTATGGAACGATGGCCTTGAGATGA
TTTACACTAATTTAAGATCAGGAAGAACAAACGAAAGCAACTTTAAAGAA
GGATGTGTTTCCGTTGGTTATTCACCGACTGGTACCATCCCTGTATACTC
TTGGTGGACCAATGATTGTGCAGATGAAAAATTCCCATATCAATACATTT
GTAAAGGAGAAGATCTAGaaaaaccatcaaaaagcgctgttttgaaattt
ttggaaagtacGACTGGTATTGCTGTTATTGCTGCAGTCGTTTTAATTAT
ATTGTTGATTATAATTCTGGTGATTGCCAAAAAGAGAGGGTGCTGTCGAT
CGTTGTGTTCATGCTGCAACAAAAATACAAACGGTATTGAAAGTGGTATC
GATAATATGGCGATGAAATAGACATTCGTGAACACGGAAGGTTtagattt
taaaggttttgtttttaaataagagtaatatcgtttgcttactcatcaat
ttcaatttacaagTTCTTTTCACGTTGAATTGATACGGATATGGAGCAAG
ATTGTTCAGAacgaggaaaagaaaaacatttttttttattcagcacaata
taacaataacaATAGGGAGGCACCGTCCTGAAATAAGACATatatctgat
atgaaacggggaacacttaaaatgaaaacctttaaaatctGAATAACAGA
AAATCTCTGGGAAATTCACCAAGTCAAGGAGTGAGAGACATACTTTTCCA
GCATCTTTTATTAATCAAGATTTTATAGAAGTAatttttatattcaaaat
ttatataaaaGTCGTAATTATTTTGAACAGGTTatttaaaattgttattt
ttgttttatatctTTGCGCCTGTGTATCAAgaatctttaaaatatttttt
gaccatAATTTTAAATATCCA
Run BLAST on NCBI

transcript from alignment at scaffold_312:68446..85169+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058658 ID=TCONS_00058658|Name=TCONS_00058658|organism=Clytia hemisphaerica|type=transcript|length=16724bp|location=Sequence derived from alignment at scaffold_312:68446..85169+ (Clytia hemisphaerica)
CAGTAAGTggcaatgatgaaatttttaacgGAAGGCGATATTTCTTTGGT TCCACAAATAAAACATGGCAAGGCGCCGAAAATGATTGTATTGGACGTGG AGGTCATCTAACTAGCGTACATTCCAAGGCTGAGAACGATTTCTTAACCC AGCAAATCGTTTCCAGGTTTGTAAGATTTTAATTCTTTTACTAGAGGCAA TGAATGTGGTATAAGGAGTattaagaagaagaaaaataattgtTTGATGA GCCCTTGCCTTCAGCTGCACCCCTCAttacgccatcacgccaaattTTCT GTTATCATTACGATCATAATGCAGAACGAATCACGTTATaacccaacctc gttccctgtgtattatcagcttttttatgcttactgatagcactaaataa ttctctggcgtccataagtaacgtaaataaaacATAGGATACACAGGAAC GACGTTGGTTATAACCTTTACGCTTAAATCCTTATTACACCATCACGCcg gaagttttttttataatcacATCATCAAGTAAGAAAATTATTCCAATCAC GCTGGAGCTCTTTTAATACTTTGTATCATTATTATGTAGGGGAGGTGTAA GCAATTGGTATGGAGGAATCAGAGTAAACAATATTTTTACTTGGTCCGAT AAAACACCTTTTACGACAACATTTTGGGGCCCTGGAGAGCCAAATGGTTT ATTAGGAGAAGACTGTTTGCATATGAATACTGATCATCTTGGACAGTGGA ATGATCTTCCCTGTAATGTTGAGTTTCCGTATGTTTGCAAGTTAGGTAAA GGTGAGTGAGAATCTCCTTTCTAATATGTTTTTATGAGTCTTCAAGAACC ATTGGATGTTAGGAATCCTagtaaattcttttaaaaatcactttgtaata ttttttgataCTAAAAAGTTTGATGATATGATAGTTACCGGTTGGCgcaa gaaaatgttttgaatcTTTTGGCTAGGTCCAGGGCTCGTGTCTAAAGGTT TCAAATATTTAATTAGAACTTAGCTCCCCGTGAACCAAGCAAAGCTTTTA TGATTTAGTATTTATACCATCTTGAACAGAGGAATTTTTATATCTGAGGA TCGTATTAAGTGTGAAATTGGCAGTAGTGTAACTTTTAACTTTgtaacaa tttgaaatatattgaTTTATATTTTAGCCAACAATTTACCACTCAAAAAT TGTAAGCTTGACCTTGGTGCACTACTAGATGATTCTGGGTCAATTGGTTC CGAAACTGAATTCCGTAAAGAAACAAACTTTATCAAAAGTTTGGCAAAAG ACTTAACAATCGGGCCATCAAACACGCGTGTTTCAGTGATCAAGTTTTCA ACAAATGCACGTTTGGAATTCAAATTTAATGATATTGAAGGACAGGATCG CACAGCATTATATAATGCATTGGATGGTTTGAGTTGGGATGGTAAGTCAA TATActctaaaaatcaattttgaattgtTAAGGGAAATAGGTTTGGTata ttttgatgttgatttgtTGTCATAATTTAATATATTTTGGTGAGCTTTCG GAGATCTTTTTGAGACAaatgaaatctttcttttttgctGACCGAGGAAC CTTTTATGCCTAAATTTAgcctgtaaaacaacaaattgaatTGGTCTCGC CTAGGATCTAATTTTATTTCTGCAACAATGAAAACATTAATAACAAATTT TGACTATTGGCTGTTGTAGAACAATAGCTATCTGCGCTATGACTAGGTAT CTCAATGAGTATGTGGTCATTGGAATTCACCGCCTCTCCCAAACGGCTGG TGGACACAAGAGACCTGTAACTGTTAATCTATGCGCCCCTTTTCCTTTTA TACccttaaggtggtagtctaccgccagatttcaaaagtcaaaaaatcac attttttgcaataactcaagaacttctttacatttcgtaatgaaattttc aggaaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGGAAACTTTTCTAgtgcatatttttattcacat agacttgaattgacaatgagcTGGCTTGATCGAAGGCGGCGCCTGCGCTT CGGTTACCGCCTAGGCGGTTATGAAAGATGAGAATGTGTGTCTCCAGAAG TTAggtccagttcattataattctttgccacggaaagtcatgtgacatct ttttcaaccaataagattgaataatttcgagggtaaaacaaacactatgg tttaactcactaaaagattatgCTTGGCttactgaaaacacataattaat ctttagtaagtgttctgttgtaccccagttctgacgtcatgccgtggcga agaatgcacatttctatctctgttacatcatgttgtgcttggaaatatct cagttACATTTAAATCCACTACAAAACATTATGTGAGCCACCAAAAGCAC ACACTGTCTAtgctctcaaaacaaaatgccgataacttaaatgtttttcg cAGAAATCCAGCAACACAACCAATGTAGAGCAACTTTATAGATTctgtag ggtccatttttcatttaaataattcatttcaatcaaagagattaagtttt gatctaaaacTTGCCAAGAAATCTGCAGAATCATGCTTACAGCTTGCTTT TCAGCTGGTTTTGATGTGTTACACTACTGCAGCTACCATCTTTAACTTCA AGAATTACGTAATGCcacggaaaataatattttgacgcccgaaaagggcg taaaaagagctttcttttggCGTATCACATTGCTATGTTTCGGCCGAGAT TGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNagatgttcagaaagacctaaggatctcaaaacacccaaaaac caaaattcgacaattttttcgatgattttttatttttgggtagactacca ccttaagggctcaaagggctctgaccatagtcagaaaattgctTAAGTGA TTTGAAGATAAACCTTTGTTTTAGGTTCCTTGACATTTTAACAAAAGACT GCCTTTTACAAGTTATTTGATAATTCATTCTGTTAATAgtaattgaaaat ttaattagaaaaatgacgttatgaactttaaaaagacgttaataaaattt tatattacCCTTATATTACCCTtataattaacctttttgtttcaaattgt CTTTAAAttagttctatttatactgagacgattaatttgACTGAAgcgag caatttagaaaatgagcattatggaggagtgtactttccatttatgtttc aataaataggatcaCCTCAacagatcacattttacaaactactcgtctca gactatttttccgtctcagtataaatggaactattGTCTGCAAAGAATTA ATCTATTTGAAATTGATAACATTTCATAGTTTTGTAGCCTGGGAATTCAA GCTCattgttataaacagtctgtgtgtgaacccttgttgcgACAAACTTT CTGAATTTTGGAAACCAAGACAAACGCACACAAGCAAGTTCacaagactt tcaaaactactaaaaaaaaaaaaagtttattcacgataagtgtgcactct tttttcttttacctataactttttaaggaattcttcaatctttataaatt tggtgtcattggaaagatattagtgagtggaacaatttgaaataaaaaaa tattcaaaacaattctggaaatgaagatgaaaatgaagaagaaaaaaatg aagatcttgtagaaaagtgctataacttttattttcactggagagattct ttgatcttaggaggtcatcactgtgaagaaatttcattaaaatatttatc atttattcgatataaagttatgatacaaagttaataagtgattgacccca aaaaacagcaaaaaactgcagaaaacagcgtttttagacgtcaatcagct TATAACTTTGTTTGATATCTTTTGACTGAATcattatttttgagaaattt tttcacagtgatgacgttcgatgatcaaggattcacttcagtgaaaatga tagttatagcacttttctacaagNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNtattttcatcttcgtttttagaatttttttaaagatt tttttatttcaaattgttccactcactaatatctttccaatgataccaaa tttataaagattgaagaattccttcaaaagttataggtaaaagaaaaaag agtgcacacttatcgtgaatagactttaaaaaccaaatcaaaatatcaGC CACATGCAATTAGACTTCCAACCAACAGCCATTTTGCTTCTAAATTAATC TAtgctttcaatttcttttgttttccgttTTTCTGCAGAGCCAGCTTTTC ccataaattatcaaaatgcgtgCGAAaatactgctaagtaatacgcacaA AATCTGGCCAATCAGActgaacctgcattgcagggaaaaatctccctgca ggcgcgTTACCTgtgccaagcgttaaacaagctgCAAAATATCTTGtttc ccgaatagacggggggggggggccgacaaagagggggggggggggggccg acaaagagggggggggggggggccgacaaagagggggggggggggggccg acaaagagggggggggggggggccgacaaagagggggggggggggggccg acaaagagggggggggggggggcttaagAGGTAGGGGGGGGtaggtttta aattttttaaattctaataatggatggaataagagggggggaggtaattt gaagacagaattttttttaactgatatcaatttcaacaacaaaaaagaaa ctttaacaaatgaacacgtaaaataagaacaaatactagcaaaaaggaaa attttaataagtttaaggtctatctacactgtaataaaatattgaattat tcgaatttaatttgCGGTGGGGGGTTTTAATAAGAGCGGGGTAACggatt ttttttctgttaacaattagcggggggggggggtctattcgggagacaag agtaagctAGACTTAGGAAAAAGTTTAACgtttggattcccaggctaata gTTTTTTGACTACTTTAAGCagaatatgaaaaattcactatgatCAGAAG TGCTTAAATcagttttcccaaatttttagCAACCCATCAGGCTACTATAA GTAATAATAGAACACTGTAACAAGCAATATTTCATTCATTTACAGGCGAT CTTACGTATACTGTTGATGCTTTAGAGCTTGCtcaaaaagaaatgttttc gGAAGCTAATGGACAAcgtaaaaatgtttcaaaggtaaaaaaattaattt aaatctGCAAACTTTGAATGGGCAGCTAGCTCATTTAGAAGATCAATAAT CACCCTGTCTCTCAGTTGATTTTCTTTAGATTCTGACAACActcacgtcc atcagtaaaataaaacaatggTGCAAAATATGTACAAGTTTTTCTGGTTA ACAAAATGTAGAGAATCCATTTTTCTATCAGGTCTTGTTAGTTGTGACAG ATGGGAAAAGTACCAGTGGTGTTCAAGCTGTCCAAAGAGCATCTGATGTT CTCAGTAAACAAGGAGTGAACATTATCCCAATTGGAATTGGAAACGTTGA TCAATCTGAGTTAGAAGCTATGGCAACCAACAAATCAAACGTGTTTTATG TGAACAACCTATCGGAATTGGAGTCTGCTGTATGGGGTGTCCTAGAAGCA AAATGCACACGTAAGGATCTTCGGTCGATAAACTTTGCCTTATGGTCGGG AGGGAAGtccttttttcataaatttccagaaaaaagaatcttaaaaaaaa catcattagtCGTAGGAACAATGTGTAAATAGTGCCTTCAAAACATTACA ATTTGCTACGTTGTCAATTCGTGATAGTTGTTTCTCCTCTATTGTCATTG AGTTGACTTTAGGCGCATTCATACTGGACAGTTTCCCTAGTAAAACTCTA GTTTCGATGGATTTAATTAAGGAAACCTTCCAGTGTAAACGCGCCCTTTA TTATATCCTTTATTAATTGCAGCCATTAAATGTCATTACAAGAAATGCAT CTACAGTGGCTGGTCCTCGTGGTCCGCAACATGTGGATTGATAGCAGATC GATCGCGTTCATTGACGAGATCGGAAGATGCTGTTGAAGAAAGGTTTGGT GGTTGCGCTGGTCTACCGACAACTTGTGAAAACCGTGAAATTGAAACTAT AACTTTGAACAGTTGTCCGTGTAAGCATAAACTTATTCATCCTCTAAACG TCTTTAACCCTTCGTCGTTTTCTTGAGATATTGATCTAGTCcatttacac ccctgtctcataggccccggtggaactttttccagaAGCAGGGATCAAAA TTCCTATTAAAATCCAaatagggatagaaattctattgttccaaggttaa aaaatcctgTGGGATATATTGGTTTTAGAGGTCAATTTTTAAACATCGAA TTTTGAATTGGGAggaaatcaaagttaattttccAACGGGGCtaaaattc tagggtatttttcccaccgcaGTAGCATAGTCAAGAgaggcgcaaaattt gtgtaggagaacaGATtcttatgacactgtaattatctatttatGATATT AaaagatcataataaaaaagATTATCATATACAGTGATTGTACACAAATT TGttccaatagacgatatcggcttaacgtgaaaactcagatttgaccccc gaatattgcccacaattctttgcgcggaaaaaagttcacggtgaaatttt ttccacacaaagcattgtgggcaatattcgggggtcatatctgagttttc acgttaagccgatatcgtctattatggAAATTTTGAGTTGTGGAGATTGG TTTTATAAGACATTTGAACTTATTAAGTGATCATAAAACTTTTCCAGTAA AAGAGACATTTGAGCTATGAAGACTACCTCTTTTTATAACATTTGTTACA TTGCAAAATTTTCATATAAACTTACAGATACAACGCTGGCTCCACCAACT CAGACACAACCTACACCATCTCTGGTCAAGTGGGGCTCAagtaagtattt ttttcaattaaattatcggtaattttcaattttgaaagaaaaatgccGAT TTTTAAAGTAATCTACCTGGAAGTTGCCAATTATCCTTCAGCAATGCTAA AcgctttcacaaaaatgcaacATCTTTGCTCGTGGTATGTATTACATGCT AGATTTAGGCTTGGTCgaatcctaacctaagaataccgtaagaatatttt aggatgattttccatcataaaaagaaaaatcacctttcttataaaagaaa aaacacctttcttataaaagaaaaaacacctttcttataaaagaaaaaac acctttcttataaaagaaaaaacaccattcttataaaagaaaaaacacca ttcttataaaagaaaaaacaccattcttataaaagaaaaaacacctttct tataaaagaaaaaacacctttcttataaaagaaaaaacacctttcttata aaagaaaaaacaccattcttataaaagaaaaaacaccattcttataaaag aaaaaacaccattcttataaaagaaaaaacacctttcttataaaagaaaa aacacctttcttataaaagaaaaaacacctttcttataaaagaaaaaaca cctttcttataaaagaaaaaacaccattcttataaaagaaaaaacgtgta cttgaaactcaaaattacTACTTGACCATTGAGaccaattagcctccgtc tcggaaggggactgggcccgaatttgcggacgttttcacagtttcacttt cgttttcggctatacgacagcgttttcaagcagaaagNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcagattag tatgatttcatcagaaaaaacagttacatcaaagctccttattgatatgt gaaggctaccaaaaatagcaaactcctccatcagaacaactttaacataa gggacaaggacagtcaagaagtctactttgttgaaaaattgcacaaaata cttagagaaaatggtactatacataactatggaagcccattctatactcc taattatagttgaaagatcagcagttgagagggttgattaaaatagaact caaagcacacaataaagtatatttgtccagaaagaactggcatgttgttt gctttgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCTGACGCCAAGctaaatctgtcgattaaaaatttccatgaaaatta taattgaaacttatctcgtaaaatgcttttttcaacattttggaggtgtt caaagctagaggtatcatatgtagagccaagcaatacatgaaaagtcatt tgctatcccatttgccatcaaatcaaacaaaaaccaacaaatcatgtctc ttcactttcatgtcacatcgtgtttatatggggtatcagaaagccaatcc acaagaagagagccatcttcctttattatggagtgttccaaaactattgg taggttgtttggaagtaaagaaacccacacagtttgttttattttgaaga tttaacttgaaaacaaactgcatctttccagcagaaactcatgtttcaac ctgctacataacattggtcagtcggttCCGCTACTAACAtctaatagttt tattatagccgagcttgagaatccgtaggcagaacttgtaacatgtatta tgtgtacaattatgtcagtcgacttgaatcatgatacattacccccaatt tcactggatgcattttcgctgtgaaattatccgcaaaattttctgaccgc gttctgagacggaggctaatgaagtataagcccgaggtgctagaatcgaa tctctttAGTAGGATTTTAAAGAGgctaaatcctaccaaagttgcgcggc cttgaacAGCCCGTGTGATGGTTTTTATACAATTTCCGAATTGAAAGTTT ctctaaatcaaaaaaaacaccactcgaaaaaaaagaaatcgctaaattca atccgtcatAAGAAATACGGCGACATTTTAAAAGCTTCACTtcttcttgc ctgagaaaggttaagattcacttctagccctttgggcttatacttcattg attgAGACTCAGATTTAAGGATTGTGTCATTGTTTTTATCAATCCATTTC CTAAATACTTTACTATAAAAGCAACGTTTTTTCATATCTTTTAGATGAAT ATTACTTCAGTGATGTCAAAGTGACTTGGTTTGAGGCTGAAAGATTATGT ATTGCTCGTGGAGGAACTCTGGCAACAATCCTATCTCTAGAAGAAGATGA TTTTATGCTTAATCAACTGACCAAAAGGTTTGTGAAATTAAACTTTAGTA CTGTGGTATTTAAGCAAAATAGGTGTCCGGTATGTGCGAACCATAAGGGT TATATACGGTATACCCTCGAAAGTTTTTCTAAGGACTCtctataagggtc gattttcgatttttggctcagACATACCCATCACCTCGCAAaccaccccc cccccgggactgtTAAATTCATATCAGAGAACGGGAATTTGAGAGCGTGT AGAACGCAGGGCCAACGCCACAGGGGGTCAAGGGGTCACGATCCttctac ttttttcaaataaaatgttatttttaaaatatcatGGTTTATACTTTTGA AAGGTTCGTTTCTGGGCAGGGTTATTTTAAAAAGCTGCTGTACCTCCTTA ATAGTCACAGTATTTTTGGCTCCTCCACTTTCTAGATCAATGCGTTGGCC CTgcagattttttgctaaaataagcCCTGCATTGGAGAGCGAAAATAAGT TGGTGAGAGGGTGCTGGTCAACCTTTCCTGCCAACAGATTTCCTTACACC TTCTTCTTACGCTCACTTTTTATGAGTGGTATCGCTCCAAACCGTCCACT GACGTATCAGTCTATAATCAAAGGTGAAAAACTTAAACTTCTAAGGGTAT GCCAAGTTTTCTTTCCTTTCTTATTCTAGAAAGCCCTTTAACGAAAGAAC TATTAGTTATTGGTTAGATGGCGTTAAAAGGAATATGAAATATGTTTGGA ATGATGGATCAGAGATGATTTATAAAAATCTTGGTGGTGGCAGAGCAGAT GAAGATAGTTACACTGAAGGATGTGTTTCCGTCATGTATGGACCGGGTTT TCTTGTTCCCGAGCCTTACTCTTGGTTGAAAGGTTCTTGTACAAATTATG GATACCCAATACAATACGTTTGTAAAGGAAAAAAGCTCAATGGTTAGTAA CACAATGACctaaactttatattttgtatttttttcatacAGGAATGGAG GGGAGGCtgcaacaatttcaatgaaaatcatTCCAAAGACATTTTGATAT TTAACCCAACTGCCACTCATATTTGCCATAAGGATATGGAACGTTTTAAA AATTACCTAttgacaatatatttttcaccccctgtgatgttttttctaaa aaagccaatttttcaatttttctcacGATGATTAAGTGAATAAATAGATC TTACAAGGCTGTcgtgtttgatttttttctgtgttgATCTATTTcataat ctttttttaaacatttagaTTCGCCTTCCATTACGACCGCAGCCACCATG GCGCCTACCCCCGAACCTTTACCATCATTGGTGACTTGGGGCTCGAGTAA GTTTTTAATACATAAAACCTGATCATTCAAATTCATTGTAAAGCCAATAT GGTACCAGGGAAAATTCAATTAATTTGTTAAATGGTCAGAATGCTTTGGA CACATATATCTAAAGAATTTAGCATTTGtacagttttgataaattttaag tCTCACGCTTTCTTAGCAGCTAAGTACATTCAAATTTCATTGGAGGTTGT TATGTCTTAAGACTTATTTTACAGCGATTTGCTAGTCTAGACTCACTTAT CTTCAAGCGCcgttttgaatatattttagaTGAATATTACTTCAGTGATG TCAAAGTGAATTGGTTTGAGGCTGAAAGATTATGTATTGCTCGTGGAGGA ACTCTGGCAACAATCCTATCTCTAGAAGAAGATGATTTTATGCTTGACCA ACTGACCAAAAGGTTTGTCTTTGCTAAATAccgtttttctcaaaaaagca CCACGgtgtttttttccatttccagATATTAGATGCGGCGGGTTTAGAGG CTGGCgctgcaatttttttttcgtcagcggacgcagacctgatttagcgg ccgaagacctgaattaacggttgaagacctgaattaccggcaaaagacct gaattaacggtCGAAGACCTAGCACCTATTATCGGATGGCTCTCTTTTCA AATAATACTTTCATATACTATTCTTTCTACCATAGCTTAGTTTCATGGCT GTATTGTATATTACCTTTTCTAGGAAGCCCTTTAACGAAAGAACTATTAG TTATTGGTTAGATGGCGTTAAAAGGAATATGAAATATGTTTGGAATGATG GATCAGAGATGATTTATAAAAATCTTGGTGGTGGCAGAGCAGATGAAGAT AGTTACACTGAAGGATGTGTTTCCGTCATGTATGGACCGGGTTTTCTTGT TCCCGAGCCTTACTCTTGGTTGAAAGGTTCTTGTACAAATTATGGATACC CAATACAATACGTTTGNGACCGGGTTTTCTTGTTCCCGAGCCTTACTCTT GGTTGAAAGGTTCTTGTACGAATGATGGATACCCAATACAATACGTTTGC AAAGGAAAAAATCTCAATGGTTTGTAATACAGCAACCCCAATTTAAAATC cccaatttttattttttattttctatccaTTAATATACCCAGTTTTTGGC TTAATTACAGCAGGCTATTTAGCTCATTATTCTCACAACTGTGCTAACAC AATAAGGCGTTCTGTCGGCCATCCTAGACTAACTACCCAACTCCCATGGG TTATCTCGGGCGAAGTTCTATTTACTTGTCAAATAAACCTCGAAACATAT GATCTCCCAAATTAATACTCGGTTCTAGCCATACAAACTTTTCTGATCAa caactttttttgatctcgtaGCAGCTGCAGCAGGAAAGTAGAACACCCAG CTTAGTACAAACTGTACTTGATGCCTCTGTGCTTTATGCTCATCCAATTA AAGAGCAGAGTCAAGGTTCAGTGGGGGGGATCCAGGGAAAGAAGTGGCTT TTTCCCCTACATTTGGGTCGACAGCTAGAGGAAAGGGAGTCTCCGAGTCG CGTTCGACTGCAATTGCAAACTAATTCTGTTTGAGTTCTCATTAGATTCG CCTACAATTACGACAACAACCACGATCGCACCAACCACACCATCACAACC TTTGCCATCCTTGGTGACTTGGGGAGCAAGTAAGTAAAAGACACTTTTAT CAGGAAGAGATAGAACCTACCTACATTCCTTTATACATATGCTTGATTTG AATTGAACTgttaatttcaatttaatttcttttgtgtCATTTTAGTGCAA TATTTCTTCAGCGATGAAAAACTGAACTGGTCAGAATCGCAACAAAAATG TACTGATCTTGGAGGAACCCTTGCAACAATCTTCTCACAAGACGAAGACG ATTTTATTCGTGGCCAGTTGCGCGATAGGTCTGTATAACCTTAATATGTT GCAAGGGAGAGGGTACTCTTGCAAAATTAGGCTCTTGGTATTTGTGGATC TTCACTATTGCTAGAggatagagaaaaaaaatagaaaatagtcTTACAAA GAATTGATGTTTCACTGTTTTTGTCTCTCtaaagggtcactttttcgtaA ATTATTTTACATGTGACTTATGACCAGTATAAAATTTCATACTATACACA AATTTACAATAGAAAATCACCATCTGACCGTTCTATCAACTACTGNGTAA AGTTTTTTAATATACACAAATTTACAATAGAAAATCACCATCTGACCGTT CTATCAACTACTGGCTTGATGGTGTCAAAAAGGATACGAAATATGTATGG AACGATGGCCTTGAGATGATTTACACTAATTTAAGATCAGGAAGAACAAA CGAAAGCAACTTTAAAGAAGGATGTGTTTCCGTTGGTTATTCACCGACTG GTACCATCCCTGTATACTCTTGGTGGACCAATGATTGTGCAGATGAAAAA TTCCCATATCAATACATTTGTAAAGGAGAAGATCTAGGTAGGCAAATATA TTTCAATAGTGAAAAAATATCTGCATAATAGACCTTGAATGTATTATTTT TGGTGTGTGCTTAATTTAGTGGTTGGTCAAATTGCGATTTTTGGCGGATT GGGTGATTTTAGACATCAAGAGCTACTTGATATTTTAACAGCTTTTACTC TAAAATGCTAATTTCATATAGATCcttaaaagtttttgttaaTTTGGGCG GGTActgtatttaatttggcggattttacCCAAAACAACCAtatccgcca aaattaatacacttaGGCAGGTCTTTTCTAAATTATTTTAGTGCAACTGC CTCGATCTGAAACAACTAAAGTGATTGAATCCTTTGTAAAAGCAAGTGTA TCTCTGTAAATACACCTACTCGACTGTAGCCACCAATTACCGTCCAAGTC TATTTTTCCCACCTATAGAcgatagaaaaaggtgtaaaaaaaggattgNT TGaggtgattaaatcccttgTAAAAGCAAGTGTATCACTGTCATAAATAC ACCTACTCGACTGTAGCCACCAATTACCGTCCAAGTCTATTTTTCCCACC TATAGAcgatagaaaaaggtgtaaaaaaaggattggatcgagtttagggg gataattaaataataaagtggcacgcgcctgactgcGCGACTACGGTTAA AAAGGTGTATAGAGTAAACTTCTTATGAACTCTTGTGGGAAGCAATTACC TTATTTCATATCTTTTTCTACTCCATAAGGGTCGAGTTTTGGTTTCTGGC TCACTCGTACCTGAGAGCCTAACCTGATGACAGATGGTCATAATTCTCTT ACGCGTACGGTAAACCTTTgggagcttcagcgtggtgtgcagaaacaATG ActatctgatctcaggttagccTCATCTAAACGATAAAgctatttatgtt tttttatttctatctttctagaaaaaccatcaaaaagcgctgttttgaaa tttttggaaagtacGACTGGTATTGCTGTTATTGCTGCAGTCGTTTTAAT TATATTGTTGATTATAATTCTGGTGATTGCCAAAAAGAGAGGGTGCTGTC GATCGTTGTGTTCATGCTGCAACAAAAATACAAACGGTATTGAAAGTGGT ATCGATAATATGGCGATGAAATAGACATTCGTGAACACGGAAGGTTtaga ttttaaaggttttgtttttaaataagagtaatatcgtttgcttactcatc aatttcaatttacaagTTCTTTTCACGTTGAATTGATACGGATATGGAGC AAGATTGTTCAGAacgaggaaaagaaaaacatttttttttattcagcaca atataacaataacaATAGGGAGGCACCGTCCTGAAATAAGACATatatct gatatgaaacggggaacacttaaaatgaaaacctttaaaatctGAATAAC AGAAAATCTCTGGGAAATTCACCAAGTCAAGGAGTGAGAGACATACTTTT CCAGCATCTTTTATTAATCAAGATTTTATAGAAGTAatttttatattcaa aatttatataaaaGTCGTAATTATTTTGAACAGGTTatttaaaattgtta tttttgttttatatctTTGCGCCTGTGTATCAAgaatctttaaaatattt tttgaccatAATTTTAAATATCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036953XLOC_036953Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058658-exon-scaffold_312-1491911889:68446..68611TCONS_00058658-exon-scaffold_312-1491911889:68446..68611Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:68446..68611TCONS_00058658-exon-scaffold_312-1510915933:68446..68611Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:68446..68611TCONS_00058658-exon-scaffold_312-1575043694:68446..68611Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:69035..69240TCONS_00058658-exon-scaffold_312-1491911889:69035..69240Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:69035..69240TCONS_00058658-exon-scaffold_312-1510915933:69035..69240Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:69035..69240TCONS_00058658-exon-scaffold_312-1575043694:69035..69240Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:69623..69886TCONS_00058658-exon-scaffold_312-1491911889:69623..69886Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:69623..69886TCONS_00058658-exon-scaffold_312-1510915933:69623..69886Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:69623..69886TCONS_00058658-exon-scaffold_312-1575043694:69623..69886Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:74591..74679TCONS_00058658-exon-scaffold_312-1491911889:74591..74679Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:74591..74679TCONS_00058658-exon-scaffold_312-1510915933:74591..74679Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:74591..74679TCONS_00058658-exon-scaffold_312-1575043694:74591..74679Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:74877..75105TCONS_00058658-exon-scaffold_312-1491911889:74877..75105Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:74877..75105TCONS_00058658-exon-scaffold_312-1510915933:74877..75105Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:74877..75105TCONS_00058658-exon-scaffold_312-1575043694:74877..75105Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:75418..75615TCONS_00058658-exon-scaffold_312-1491911889:75418..75615Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:75418..75615TCONS_00058658-exon-scaffold_312-1510915933:75418..75615Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:75418..75615TCONS_00058658-exon-scaffold_312-1575043694:75418..75615Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:76373..76435TCONS_00058658-exon-scaffold_312-1491911889:76373..76435Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:76373..76435TCONS_00058658-exon-scaffold_312-1510915933:76373..76435Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:76373..76435TCONS_00058658-exon-scaffold_312-1575043694:76373..76435Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:79590..79722TCONS_00058658-exon-scaffold_312-1491911889:79590..79722Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:79590..79722TCONS_00058658-exon-scaffold_312-1510915933:79590..79722Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:79590..79722TCONS_00058658-exon-scaffold_312-1575043694:79590..79722Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:81769..82114TCONS_00058658-exon-scaffold_312-1491911889:81769..82114Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:81769..82114TCONS_00058658-exon-scaffold_312-1510915933:81769..82114Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:81769..82114TCONS_00058658-exon-scaffold_312-1575043694:81769..82114Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:82641..82724TCONS_00058658-exon-scaffold_312-1491911889:82641..82724Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:82641..82724TCONS_00058658-exon-scaffold_312-1510915933:82641..82724Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:82641..82724TCONS_00058658-exon-scaffold_312-1575043694:82641..82724Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:82841..82973TCONS_00058658-exon-scaffold_312-1491911889:82841..82973Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:82841..82973TCONS_00058658-exon-scaffold_312-1510915933:82841..82973Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:82841..82973TCONS_00058658-exon-scaffold_312-1575043694:82841..82973Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:83276..83532TCONS_00058658-exon-scaffold_312-1491911889:83276..83532Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:83276..83532TCONS_00058658-exon-scaffold_312-1510915933:83276..83532Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:83276..83532TCONS_00058658-exon-scaffold_312-1575043694:83276..83532Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1491911889:84467..85169TCONS_00058658-exon-scaffold_312-1491911889:84467..85169Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1510915933:84467..85169TCONS_00058658-exon-scaffold_312-1510915933:84467..85169Clytia hemisphaericaexon
TCONS_00058658-exon-scaffold_312-1575043694:84467..85169TCONS_00058658-exon-scaffold_312-1575043694:84467..85169Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_312supercontigscaffold_312:68446..85169 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12711 1.33305 0.590358 0 0.285472 0.0224586 0.713126 0.170449 0.675092 0.56485 2.11128 0.887858 0.67734 0 0.31758 0.378028 0 0.267695 1.77775 1.46755 0.152203 0.156379 1.20559 1.13966 0.15282 0 0 0.180245 0.152146 0.54315
Blast
BLAST of TCONS_00058658 vs. Swiss-Prot (Human)
Match: CLC4K (C-type lectin domain family 4 member K OS=Homo sapiens GN=CD207 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.307e-19
Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = 3
Query:    3 VSGNDEIFNGRRYFFGSTNKTWQGAENDCIGRGGHLTSVHSKAENDFLTQQIVSRGGVSNWYGGIR--VNNIFTWSDKTPF----TTTFWGPGEPNGLL-GEDCLHMNTDHLGQWNDLPCNVEFPYVCK 368
            VS   + F G  Y+F    KTW  AE  C+ R  HLTSV S++E +FL +   + GG+  W G  +  +   ++W D TPF    +  FW PGEPN     E C ++    L  WND PC+  F ++CK
Sbjct:  195 VSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYK---TAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICK 320          
The following BLAST results are available for this feature:
BLAST of TCONS_00058658 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLC4K6.307e-1937.98C-type lectin domain family 4 member K OS=Homo sap... [more]
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