TCONS_00058655 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058655
Unique NameTCONS_00058655
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3853

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058655 ID=TCONS_00058655|Name=TCONS_00058655|organism=Clytia hemisphaerica|type=transcript|length=3853bp
gttgaaagtttgatgtttcCTCTTGCTCATGGCTATTTTTCTTCACGGAG
AATTATTTTGCATGATTCATGGGCCGAGATTGTTGAGAAATCTCCAGGAA
ATTGCAACACATATCTGCTAATTAAGGGAGTGCGTGAATCACCTGACGGA
GGAACGCATTATTCTGATACAAGCGACGAGATCTCTTCACTCAAACAACA
GTATCTCTCTGAAATCACTGTTAACAATACTTCATCTGTAAACGAGCATC
CGAAGCGTgaagaaaatcgggaaatcgggataCAAACGGATTTGGATATG
GTCGGTATGAATAAACTGTatgataattttgatgagatttTTACACCAGT
TACAGAAACTCTACCTGAAAGACTAAAATATAACTCTATCGATATGACAA
ACATTGTATCTCAATCTGAAAAGGGGACACTAGATGTCGTGGAAGACCAA
ATTATAAGTCCAGTGAATGAAGAAATGGTCTCTGAAACGAATCCAGTGGT
TTTAGATGAGGAAGTACCGTCACCGAGACCTAATGATGTCATTATAGAGG
ATAGTGAGCTGTCTACTGATGACGATGGTAGTAGTTCAAAATTGGACGAA
ACATTGAATGATGAACATTTAGAACAAAGTTTGAAAGTTACAGTGGAAGA
AATAACCGATGAGAACAATAACGAACCTCAAATATCATCTTCTGTTGAAA
ATCTTTCTCCTCCCGTGGCTGAAAACTCTCCAGTAGACGGTAAAAAATCA
CCGGTGAATCTCTTCATAGCAAACATTATAGAATACGGGCGTTCCGACGT
TTCCTCGGATAGTGATAACGACGGGAACCGGAAGGACAGTTTCTCTCGAA
CACGCCGTAAACGGATTATGCAACGGCGCTCAAGAACATCAGAAGATAAC
GAAAGTGAAACTAAAGACGATTGCAAAAAATCAGATAGTGGAGACAGTAA
AGTTAGTAACGAGACGACGCCACGTCGAAGAAGACACGGCGTTTCGGCGG
AACCCGTACGTGTATCGTGGAGTACGTTGCGTGAATCGTTCAAGAAATTG
CAACTGACGTCAACGTTGAAAGACATTGAACAAGAACAGCAATCTTCCGC
TGATGAGCTACAAAAAGACTCTGCAAATATTGATACATCCGACATCGCTG
CTACAGAAGTTTCCGAAGAACAATTAGACTCGCTTATCCAAAATATTCCA
TCAATAGAGGTCAGTCACAATGATGCCGAAAAAACAGATAACATCGAGAC
CAAAACAGACGAAAAAACACCACCAACACCTATGACGTTTAAAATGCCGC
CCAACTCACCCTCCCCAGTCCTAGATGCATCACAGTTGGGTTCACTTGAT
TTCAGCATTCAAAACTATATTGAGGATCAagatcttgaaaagaaattcaa
caaTTTGGTTTTCGCTTTCAAAACAGATATCTATACTCTTCAAAAACGAC
TTGAAACACAGGAACGAGCGCGTGATGTTGCGGAAGCCAGCATGGAGAAA
GAAATCATGAAGCTCTCCAAAGCTATCGGTGACGTCCAAAAAAATGGTCG
TGAAACTCATGAATATGCTCAAACTTACTCCTTACTGTCACATCAATCGG
ACATTTTACGGAAAGCAGCGATGAAAGTTTCCGCACAATCAGAACAACAT
GGAAGCTACCAACAGgaaaaccGTATGTGTCAAAACTTCGAGATGATCAT
TCAATACACAGACGCTTTACGTTTCAACATGaccaaaatgaaaaacgaaa
tcGAAGAATTTAAAACACGTTACGAATGCACTGGTGATGACGCCATTTCT
ACATCACGTGACCAGTACTCGTCAGAATATTGTTCAGTGCAGGAAGATAA
AGACACCGATAATGAGTTCCCTAAAACAGAAACCATCACCACACTTGCAT
CCGATGCTGATGCCAAAGAAAACAAACCATCATCTCCACGGCCAACCTTC
TGTTCCATTTCAAAATCTCTTGTAATGGCAAAAGGTATGGCGAAGCTCCG
AAAACAAATGTCGAAAGTTGACGAAAAGGTCGAAAAAGAGCCTGAGGAGA
CGACATTTACGTCACATTCAAGGCGTCTTTCGCCTGCGAAACGTGTTCAG
TTTGGCGAAACGTCGTTTAGTATCGATAAGGAAGATCATGTTAACGACTC
TGAtgaaTGTTCAACCACGTTTCAACGTCTCTGCGAATCCACGATAACAA
AAAACTTGGCAAAGACATTACGAAAATTCTTACCTCTTATATTGACACTG
TTTATCATATACGCATTGGCTAATTTATTCGTACGGAGCCTTGAAGTCGA
TACTCTGAAACTACATGATCAGTTATTACGGTTTATACCTCATACTATAG
AACCTGCTCAaccgaaagtctctcaaagccAAAGGTGATATGTTTTCATA
TTTCtaactttattttttgattattttgtttaaagatattatatttttat
tttagattttaacATATTTGATTTCTCTTTGAAGACTTCTAGTGTCAGAT
AGAATTGAAATTTCACGTTTTACGAAAAGACATAGTGACAAAGAGGTTTT
GCCTTTACCAGCGAGTTCCCGCATTTAAATATCTTTTCATGAGTCGTTTA
GTCGGTAGCTTACACCGATCGAAAGAGTGTTAAATCCTTAGGTTAAGTGG
GAGGAGATGGAgattttacaagctcttatttgatttggttggttgttaac
cagtaataaaacaattttgttactttttctaaataacttcaaatgaccaa
ttattaaagtatcttataaaaactccatctcatctggttTAAGTGCGACA
AAGAAAATTCCGAAGGAAATATAGGCTTATCGCGGTAGGTTTAAATTATA
CACCATATCCCGCTTATCGTTTTGATATCCAACTCTGCTACTCCTACACA
TTGGTTTTCTCTCGCCGANGTTTCAATTATACACCATATCCCGCTTATCG
TTTTGATATCCAACTCTGCTACTCCTACACATTGGTTTTCTCTCGCCGAA
AGTGAGACGTTTTCTAAGAATTCAGAATTCTATGAATACATTGATGAGAA
AAGTATTCCTGATTGTCTgtgatttaaaggttttgttttaaataagagtg
atatcgtttgcttactcataaattttgccttacaagctttttcacattga
acgacacggatgtggagcaagattggtaaaaaagttgaaaagaaaaacat
tttttgcttgtaTCAGCATATTGTAAAAAtaaacactgtcctgatatgaa
atatgtgtctgatatgaaacgggaacacttatgtaaaataaaacctttaa
tttgaCTGTCTTGATGTTTATTACGAGTCGATAATAGAATTAAACAAGGA
AGTCTTTAgtcatcttttgaaaattcctCAAACCCGCGAATAGCTAGGAT
ATTTTATGGAGAAATGTTCCTCTGCAAGGGATTGCCCATATTTTCACATC
TCTGTCCCAGTGATCCTTCtttgtaccagagtgtatctcatgTTTATCGC
ttcggcaatgaattttgaaatcagccgtagatactgggtctgtgtataGA
CAACAGTGATCCAAGCTCAAGGGTATGaatcaagaaaaaagaaagtgGGG
CCCACTTAAATAGAGAGAAATATCTTATTATGGATCTGTCTCATTGCCGG
GCAATAACTGGCGGGCTTTCTCACTCGTTTTTTAGATTTGTTGAAACGGT
TAAAACATTTAATTGTTACGATAGcaggttttattttttctgtttatgCT
TTACAATATTTATGTACAAACAATTTGATGAACaaatatatttaatattt
tgtaGATATTTTAACAGTACTATATAAAAAAGATACTTGAAATTGTATTT
GAA
Run BLAST on NCBI

transcript from alignment at scaffold_312:48827..61672+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058655 ID=TCONS_00058655|Name=TCONS_00058655|organism=Clytia hemisphaerica|type=transcript|length=12846bp|location=Sequence derived from alignment at scaffold_312:48827..61672+ (Clytia hemisphaerica)
gttgaaagtttgatgtttcCTCTTGCTCATGGCTATTTTTCTTCACGGAG
AATTATTTTGCATGATTCATGGGCCGAGATTGTTGAGAAATCTCCAGGAA
ATTGCAACACATATCTGCTAATTAAGGTATAACTTCTTTGCGTAGTCTAT
TTTTACTCAGTTATATAAGAACCATAGCCTGGTGGCTGAAAGAATTTTTA
GCTCACATCCAAAGTAGATGCGAATAAACGTGTTAGTTTGTTGTTATTAT
CAGTTCACTACTATAACTTAAGAGGGCAAAGACTTTCCTAACTGAAAGTG
ACGCCCCCAAAATAACATAACATATGATGACTATAACTTAAGAGAAGAAA
ACTGCCGTTTAATCATCATAGAAGCTCAAATATTCATGATGACGTTGTCC
AAAATATCGAGAATATCATCATCCTAGAATTCGGCAACCGAGCCTAAGAA
TGCCCCGTCGATGCTCAACGATTTCAAGAAAGCACCCTACTTTTTCCATG
TTGAATTAATGTTTGTATTACACGTTAGATTTGGCTgtttggatcctaac
ctaagaatgttgtttgaatattttaggatgactTTTACCAAAAAGTTTTA
ATGTATAtacatgatgaaatggaaaacaccattcttataaaaacagaagc
ATGTATAAGTCAAATCATCATAGATAATACCTCTATGAGAAAAGTTGACC
CGAATTCAAATTATGATGGACTGACGCCAGTGCCTATGCAtgttattatt
tgttttttgtttcccTTTATGCAATGGCCTTTAACACTATAGGGTTCAAG
CTGTGCGATGGCATGTTAGCAGCAAAATTGTTGTGGCCTTCTAATTTGAA
TGTACATTATTCATAGTCATGAATTACACCAATCGATTACTTATAACGTT
TTTAAAAATGACGTAAAAGTATCAGCTTTAATGTGCACGTTATGAAAATG
CTACATAACCACGACACATTAAAGGTAAATTAAACTTTAATCCGTCTGTC
AAGAAGACTTTTCCTAAAGCAGTACATTATTACATTTTGCACGTACGTAA
AATGTAAATCCGGCAGTCTGCTTTAGTTCTTAACATTTCCGAgcataatt
tttgatttcaacTTCTTTGTTCTCGTAGTTGCTAAGGTGCCATTATGTTA
CTATGGATACTACCGATCTCCAGGATCTCTCTGATTACCCATTCTTCATT
ATTGTGATTTAGATAGTAGCCGAGTAATGatagatttttcttttgttgtg
tGCACAATAGGAAGCAAAACAAAGCGAAAGAGCAATCGACTAAGATTTCC
TCAGCAGAAGAGAAGGGAGGTCTTGTATTGCCTGTGGTCTAGAAAAACag
attcaaaacaaaccttaaggccggtgtccactttcgcgcgaagcACGCGA
AACTTTTCACGTTATTTGTAACgtcattggttgattgaaaaaagaagcaa
ttccattggtcaaaattgacgtaacggttgttttctgttcgcgcgaaact
ttttcatgacgtaatcttttcttcaggcaaaaacagtgaagaaaaaatct
ttcgcGCGCTTCGCACGCAAGTGGACACCGGCCTTTATTGTCTCAACTTT
GCAAATGTTCCATCTCGAAAAATTTAtacagttgaactcatgtaattcgg
acaaaattctcggtcccttgagaattcgaattacatgagttcaactgtaT
ATAGAATACGTATTGTATATTCCATTCCAAAGACTTTGTCTTCAGTTTTT
CGTTTTGCGGTCACAAGTATGAAAATGGGTATCTTATTGGCATCCAATTA
ACAGTTTTCCTACCAACCAAGCAATCGTGAACTAATTTAAGGAAGCTATG
TTCCTATTTAGAATCTACCTGCTTGATTGGATGAAACAATTACCTTTAAT
TATGATGATTTAAGTCAAttaatatttctttgaattccTTGAGTACTATT
ATGTTTTTGGGTAGTGATTAgttttttagaaacttttaaaTAAACAGACT
AAAATGTTTTTAGCGGGTCTATGAAAGGCGAAAGTGTCCATAGTATGGAT
TTGATGTTAAATTGTTCAGCGTATTGACGAGATTGATTGATTAGGTGACA
GGTTGATGTGAATCTTCCTAGTGTGATGACTACAGTCAATAAACATCACG
AATATGCGATCCATTTAGTACAAGATCGTTTTATGACTGcatgttatttt
tttataagagcatccaaaatttttgaagccttcgaatgttcttaattttt
ttagttttaagcccaaaaatgttcataatattttcttattttccccatct
TGCGAGTAcccattttccttagaaaatcgAGTATTTTAGAGtcttcaaag
ccttaaaatgttcttaccttGTTCTCAATATGTTGGCCCTCGGAGCCTTA
TCTTTATAGTTTATTCTTTCTAccgttattttttttatttgtccgTTATT
TGGCCAGTCAAACATCATATCATCTTTTTATCTCAATAACTTTGCTGGTA
ACCAAAGGACACGAAATGAATTATACTTGAATGAATTTGAGTCTTTCTTA
ATTTGGCTAACATGGAATGGTCATCAGTCATAGcaaatttttaatgaatt
tgaaatttctgtgCTTAGTCAACTCTTTACAAATTTCTTTGTTTGTGTGT
ATTTATTTACTTTGATAACTTATTGATTAATCCGATTCGACCATATCGAA
CAGAATCTGGTATTTGTTACGCAAGCTAAATATGAACTAAAGTTCTAACC
AAAAAGGTTTTAGAATGAGTCAGTAACAGTAGCATACTCGCTTTTCAGTG
AGTTATAGAGCTCACGTCTTAACTCTTTATAGCAACTTTTTTTGGACGAA
CGAAAAAGTCAAACCAGAGTTTGACGTCAGCACGATAAAAGATTTAAGAC
TTCGAGTTCAAAGAAACGTCCTCCTTCaagcttcttcgtttttcaaagaa
aattcataATTCAGTTCTAGCACGTATTTAATTCATGGGAGGGAGGCTAT
AAGCTACCTTGTGGTTTGAGAGATTTCTAACCATTTGTATCTATGTCGAG
TTTGACCTCTACCTAGTTCAAAATTAAACTTATTATATAAAATTAACCCA
CTGATAACAGTGTTTTATAAGAAGGGGTTTTCTTTGATAAATTTGAGTTA
TAATTAAAGGAAAAAGTCATAtctatttcataaaattggTCTGTGGTGTA
TGCGATGTTTAAGAACCATGTCTATTatggaatttgaatttttgtctcGC
ATTAGATTCTATAAAGATTTCTTTTCGTTCAAGAAGGTATgatatctatt
ttttatttcgttGATGTTAATGTTGTGACGATCTTTgattgatgaaaata
aaatctcttACTCACATTGGCTCAACGTTACTTGTACGTACAAAGTTGTA
CAATGTTTTGTTTGGCGTTCGATGCCGGGATAGCTNACTTGTACTATACA
TTGGCTCAACGTTACTTGTACGTACAAAGTTGTACAATGTTTTGTTTGGC
GTTCGATGCCGGGATAGCTTACTTTTATTTAGTGACGTTCATAAGGAGCT
CTTCTAGCGCGTCAGACAGGGATTATTTAGAACTTCAACGTTATTGCTGg
ttaatagaccttatcggagttttttatttttctaaaaaagcgatgcattg
tgggattgtttcgagtgtattacaatagaattccctcgaggaattcctaa
atagatttctattgaaatacactcgaaacaatcccacaatgcatcacctt
tttagaaaaatgaaaaactccgataaggtctatatTCTTCAATTTATTTT
AGAAATAATGTTTTACTATTTAAGACGCTCCCATCCGTTAGAAAGTCATT
TTCATGTGAAGTATATCACAGATTAAGGACGCTATTTACCTATCGATAAA
TTTAATGTAAAGAAGCTTGGCAACGCATCATTTGTTATTTTGGTGATAAG
CGGAGATTTTGTTTATCGTTCGATATTGTTTCAGTCTTTTGAATCAAAAG
AACGAACGGGCTTCCAACGGTAATCATCGGACTACCCTTTCATTCAACTT
CGAAAATGCTTTTCCGAACTGAATTAATTTTTCATCCCATTCTTTATCAT
ATCATTATTTCCAGACTCCTACTCATCTCGTGAAGaaatattttcgtttt
ttgattttatatacCTTTGGATTTGGATGAAACGAAAACATTTCGAATCT
TTATATATAAACGTCAAATGAAAACCGTGCTTTGATTAAAAATGTCTAAA
TTAGGAAAAACAAGTATATAAGATTTATGTTTGGGAATATGTTCTTTAGG
TCCTTGCTTAAGATTAAAGCATGATATGCTTATCAATTCTTTGTTCTTAT
ACGGCTCCTCGAAAATATAAACAGCTTAATGTGACGGCGGCCAGCAATTT
CCGATAACGTCATACCTCTAGGTAATTACCGTATAAGAAGAACGACAAGT
CGTGTGTTTGGTTGCATTTCTGCTTTCGACTTTGTAGAGTTTGTTAGATA
CGTGCTGTGCTGTTTTGACGTTAGacgtgtttttcattttcgctggagtg
ttttttttttttcgctgtcaaggaagaaaatttggaatAATGTTTTACAT
CGGGAGTATTATATTTCAAACGAGTACATCGCGAAAGTTTGGATTTGTGC
CGCAGGTAATGGGAATTTTATTAATGAACagtcaaaattttcataaagat
TCGACAATGGGTAATGAATTTGTCAAAAGTCTTTTCCGAACTATTCCTGC
AATTATGGTCAGGATGTGTTGGTATTTCTGGATATTTTAGGATGAGAATG
ACATTTTCAGGCCATCGATTTAAtcagatatttcaatttgagagAGGTGT
ATAATTGCTTCCAGACTGGATCCTCAGATCTTAAGCTCCTAAACTCCGAG
TTAAATAGACATTTTTCCAACCCTAAGTGaaattgtgccaaaaattatgG
CCAACATAGCAGTGTAGTCCATTGTTTGGATAGACGATGaacttcttatt
ttttttccttgtcaaattcaaaatactTTTAGATGATCAAATCTGGAATT
CTGATGTCTTTCATGCTTATTATAGTTTTCCACACAGCAATCTTTTATGG
CGAACAACGCACTCTTACTGGGCTATTTACTATTTTGAGTACCGATAGTT
TCCTGGCATAGTTCTTACTTATCACAGGGTCGGACACGAGATGTACTGAC
ACAAAGAATGTCACATTGTCGAGGGAAAACTCAtgcattgattttttttc
ttattttaagaGGTTATTGATATCTGTGCTAAAAGTCGAAGTCCCACCCT
AGATAGTCTTTGAAGATAGAAATTTTTTGGCCTTCGAGAGAACCTTCGCC
ACATTATTGATCAAGTTGTCCAAAATTAGTCTTAATGACACACATACATT
AGGTTAGACTTTATTCCTTTATGCTCTCAATTTTGCATGTTTAGCGTTGT
TTAACTACATATTGGATATTAACCATTCTCAGTTTACCTAGTGTGTGTCA
GCGGACTGAATTAGTCAAGATCTTTCCTTAGGCTATAATGACTCAAATTT
GTAAATGATGTTTTTATCAAGAAAAGTCCCAACATCATCAAATTGGAAAT
GATTAATTATGTTTCTTTTCAAGCAAGCTATAATTACAGTACGTTTGTAA
ACAATATTTAGCCTTGTATCGGTTATCCTTCCGATGGTATGGAAGCAATT
AATTATTAGTTTGTTCTATGTTATTGTGTTATTGATATTACCTTATTTGG
GCAGACATTTTGGTTACCAATACTTTAGTTATCAATACCTTTCTGCATCT
TGATAACATCTTGATTGATTTTCCATATAATCTTCCATTAAATTATCGTC
TTGaggctttatttttgaaaaattataataCCATCATACCAGACGGATTT
AAAGACTATTTTGGATTAACCCGTCTCATCCGAATCCCTATTATCCGAAT
CGAATACAAATGATGAAAGTCAACGCGTTTCCGCTCCCTGCGAGACTCTT
AGCGGTTTTATAGTCTGCTTGAACTATTAGCATGTTCTTTCTTTCTATTC
TGATAAAGATCCGATCGGAAAGTTTAATCATATTTTCACGTTGAGTTGAT
TGACATGTTGTAATCGTAAAAAGACTCAAAAAAATCTTTACTACAGTAGA
AGTTAGTTTTATgatacagttgacgctttctaattcgattttcaaggaga
atctgattttcatcgaataaggcattgtatcgaatagtagagcgtcgttt
ataagagtttcttgttttcaaggACTTTCAATATTGtcgaataatagagc
gtatcgaatagtagaacgtcgaattagagagtgtcaactgtactTGTTCG
AATAATTGCACTTTCAGAGAAATATTGACAGATTGCTATGTAGACTTTAT
CTACATTATTGCCATTATCATTGACAATTAACTGTTATACAGTGTCGAGG
CTGCAcgcggggaacacaaatttattcgagttaaggaagtTTCGAATTAT
GTAGATTGGTTAAGGCATTGTTAATTGAAGGGACCAGCAAACTTGTCCct
gttaaggagacattcgagtcgtagaggttcgagttaaagtaACTATACTG
TATGTTCATGTATGTATGTCTGGAGAGTATTACTATAACTTAAGACTTTT
AGCaccttatcggtagaaaattcATCGGTAACAATTTCGCCACCAAGCGA
TTTTTTTCGTCATTTTGTAGACTTTTTACCATATAAGgtattgtatttta
tttttatttcattacaGGGAGTGCGTGAATCACCTGACGGAGGAACGCAT
TATTCTGATACAAGCGACGAGATCTCTTCACTCAAACAACAGTATCTCTC
TGAAATCACTGTTAACAATACTTCATCTGTAAACGAGCATCCGAAGCGTg
aagaaaatcgggaaatcgggataCAAACGGATTTGGATATGGTCGGTATG
AATAAACTGTatgataattttgatgagatttTTACACCAGTTACAGAAAC
TCTACCTGAAAGACTAAAATATAACTCTATCGATATGACAAACATTGTAT
CTCAATCTGAAAAGGGGACACTAGATGTCGTGGAAGACCAAATTATAAGT
CCAGTGAATGAAGAAATGGTCTCTGAAACGAATCCAGTGGTTTTAGATGA
GGAAGTACCGTCACCGAGACCTAATGATGTCATTATAGAGGATAGTGAGC
TGTCTACTGATGACGATGGTAGTAGTTCAAAATTGGACGAAACATTGAAT
GATGAACATTTAGAACAAAGTTTGAAAGTTACAGTGGAAGAAATAACCGA
TGAGAACAATAACGAACCTCAAATATCATCTTCTGTTGAAAATCTTTCTC
CTCCCGTGGCTGAAAACTCTCCAGTAGACGGTAAAAAATCACCGGTGAAT
CTCTTCATAGCAAACATTATAGAATACGGGCGTTCCGACGTTTCCTCGGA
TAGTGATAACGACGGGAACCGGAAGGACAGTTTCTCTCGAACACGCCGTA
AACGGATTATGCAACGGCGCTCAAGAACATCAGAAGATAACGAAAGTGAA
ACTAAAGACGATTGCAAAAAATCAGATAGTGGAGACAGTAAAGTTAGTAA
CGAGACGACGCCACGTCGAAGAAGACACGGCGTTTCGGCGGAACCCGTAC
GTGTATCGTGGAGTACGTTGCGTGAATCGTTCAAGAAATTGCAACTGACG
TCAACGTTGAAAGACATTGAACAAGAACAGCAATCTTCCGCTGATGAGCT
ACAAAAAGGTTTATAAATTACTCTTCTTTTTGAAGTCTTTTTTACATCAG
ACTTCTACTACGTTTATAAATCTTATAGGTCTGTTTGTGGTTTGAGTCGT
TTATAATACGAGCTAGGCAACAATATAGGTGTTACATGATTCTTTGATGA
TGTTCTTTTGACTTTACCCTCTACTGctttaataaaaaaacatgggaTGA
TATCGTCACAGAATAGCGTCCACAAGGCCTGTATCATGGTATTCTTAAAC
CCAAACTTAAATTGTATCCATCTCCTTATTTACAACAAGTTTAAATGCAA
ATGAATAAATTTAAACTTTCTTTTCTGTAGACTCTGCAAATATTGATACA
TCCGACATCGCTGCTACAGAAGTTTCCGAAGAACAATTAGACTCGCTTAT
CCAAAATATTCCATCAATAGAGGTCAGTCACAATGATGCCGAAAAAACAG
ATAACATCGAGACCAAAACAGACGAAAAAACACCACCAACACCTATGACG
TTTAAAATGCCGCCCAACTCACCCTCCCCAGTCCTAGATGCATCACAGTT
GGGTTCACTTGATTTCAGCATTCAAAACTATATTGAGGATCAagatcttg
aaaagaaattcaacaaTTTGGTTTTCGCTTTCAAAACAGATATCTATACT
CTTCAAAAACGACTTGAAACACAGGTTTGTTTGAACTTCCCTTATTCATC
TGACATGACATTTTTTACATATTCCGTTCTAGAATGTAACTGACCGACAC
GTGGTCAGTTTTACGACACGTCAGTTTTACGACACTTTAAGATATTGTGT
GTTCTAGATAACGCAACGTAACGTAACGTAGACTTTAATGTACTCAGTAA
ATAAACGAGAAACTTGACACAATACAcaagttgcaaaattaaagtctgaa
gacaaatcccGCTTtcactcgaaatttttatgtgcttgttacatgacatt
tatttctgattggttcgaatttattgacactaataaagttatcagctgta
agttgaaAAGCAAgtataaaatcacgtgaactgaTTATAATTTTGCAACG
CGTGTATTCGTAATCGTGTGAGTACGGATACCTCTTCTCAAAGTTTCCAC
AATTTCACATTTAGGAACGAGCGCGTGATGTTGCGGAAGCCAGCATGGAG
AAAGAAATCATGAAGCTCTCCAAAGCTATCGGTGACGTCCAAAAAAATGG
TCGTGAAACTCATGAATATGCTGTAAGACTTTtcttttgcttgtaaaaaa
ctggtaaagaaTTTCtgcaagaatgttgattaaCTCGCCATCATTTCTGC
AAATCTGCccgaaaaaatttttgcaaaaattttgcaTCTTTATTAAAAAT
CTAATTGATGGCTCGGTTTTGTCTACAAATTTGTCAACCATGATGCTAGA
CTATTACATTCCTTATTTAAAACTCCATATCTTTCTTAGCAAACTTACTC
CTTACTGTCACATCAATCGGACATTTTACGGAAAGCAGCGATGAAAGTTT
CCGCACAATCAGAACAACATGGAAGCTACCAACAGGTACGCTCGTTTTGA
AgacttttttacgtgttttatttattttgtaatGAAAAATTTCCTCAACT
TGAAGAGCCTTCTCTTTGGATTATAAATCTTATCAATGAAGCTTTTTGAA
TATATACGATCAATGAATAGTTCAAGTAAGGTTgaaataaagttgtaaaa
tatgcactccatcgcagcgctgggtttgaaaaatctcaaatcagaacaga
aaagacaatgacaacagaccctctactagtctgaatcgcagacctctata
gatatacttcctatatagagaaactttttcgctagaggatgagcagaagc
ctaacgCTCTCCAacaatgttttttgaaattagccgtagatatcgggtct
gtgtacagacatgTCTTAAATATGCTGTCAATTATTCTGGTGTCACTGTA
CCGGTGCCACGGCAGCCCATTCTAAAACGTCTTCTTTGGTCTTTTTTGTT
TGGTCTTCTCTTCTCTTCTCTTCTCAATATACCGTATATAACAAAAGATT
AATTGATTAATGCATTGATTAGTAGTAACATTGACTTAAttcaattttcc
aggaaaaccGTATGTGTCAAAACTTCGAGATGATCATTCAATACACAGAC
GCTTTACGTTTCAACATGaccaaaatgaaaaacgaaatcGAAGAATTTAA
AACACGTTACGAATGCACTGGTGATGACGCCATTTCTACATCACGTGACC
AGTACTCGTCAGAATATTGTTCAGTGCAGGAAGATAAAGACACCGATAAT
GAGTTCCCTAAAACAGGTACGTTATGGAGCAGACTAGAATATTTACCTTG
AGAAAATATTAAATCTATTCGAAAAGACCGATTATTTGGTCTCGAGAATT
TTCtcaacattttaaaactttcgGTAGGCAAACTTCTTTCCCGTTCTGTG
TTTCAACTTTTCAGGAACCCATTCAGTTAAAGATATGGTTTTGGTTTTGT
CAGTAACAGtgggaaatatttgaaatagaCCTGATAGTAGGATACATGCA
TCCACTAACGGCTGACTTTAAGCTAATACTGTTTTTACCGTTACTTTTTT
TTAGAAACCATCACCACACTTGCATCCGATGCTGATGCCAAAGAAAACAA
ACCATCATCTCCACGGCCAACCTTCTGTTCCATTTCAAAATCTCTTGTAA
TGGCAAAAGGTTACTACCGATTTTATTTGACATAAACTGTTATATAACGA
TTGAAGAACTACACTGCCTTATTTTGTTCGAAGCCCAGAAAAAGCGACAA
AAACGTCTGGTCTAAAAGAACCGAAAAGATTTTATCCATCGTCCTAACag
ttttataattttcttttattctttttaaaatgttgTCTTTTTATTTACAA
TGTTTTTCTTTATCAGGTATGGCGAAGCTCCGAAAACAAATGTCGAAAGT
TGACGAAAAGGTCGAAAAAGAGCCTGAGGAGACGACATTTACGTCACATT
CAAGGCGTCTTTCGCCTGCGAAACGTGTTCAGTTTGGCGAAACGTCGTTT
AGTATCGATAAGGAAGATCATGTTAACGACTCTGAGTAAGTTGGAGGGGT
TTTCTCCCCGGGGGAGAATATCTTTAAATTTAGGGGAGGGACCTGTGTTA
AGTGATTTTTGAACAACTCTAGACATACTGGCACTAATGTTTAACGAGCT
TAAAATTTATATGTTTTGTGAGCTTTATCCTATGTATTGAATATTCAGAC
TCGCTGTAAAATGTGATCGGAAGCTCTGGTTAAATCTATAAAATTCGCAG
AGGGGCTTGTATTCTCTGCTATTGACTATgctggaaaatgttcgaaagaC
CTGACCAAATGCTTTATAatataaacgttttttttttcatttttagtgaa
TGTTCAACCACGTTTCAACGTCTCTGCGAATCCACGATAACAAAAAACTT
GGCAAAGACATTACGAAAATTCTTACCTCTTATATTGACACTGTTTATCA
TATACGCATTGGCTAATTTATTCGTACGGAGCCTTGAAGTCGATACTCTG
AAACTACATGATCAGTTATTACGGTTTATACCTCATACTATAGAACCTGC
TCAaccgaaagtctctcaaagccAAAGGTGATATGTTTTCATATTTCtaa
ctttattttttgattattttgtttaaagatattatatttttattttagat
tttaacATATTTGATTTCTCTTTGAAGACTTCTAGTGTCAGATAGAATTG
AAATTTCACGTTTTACGAAAAGACATAGTGACAAAGAGGTTTTGCCTTTA
CCAGCGAGTTCCCGCATTTAAATATCTTTTCATGAGTCGTTTAGTCGGTA
GCTTACACCGATCGAAAGAGTGTTAAATCCTTAGGTTAAGTGGGAGGAGA
TGGAgattttacaagctcttatttgatttggttggttgttaaccagtaat
aaaacaattttgttactttttctaaataacttcaaatgaccaattattaa
agtatcttataaaaactccatctcatctggttTAAGTGCGACAAAGAAAA
TTCCGAAGGAAATATAGGCTTATCGCGGTAGGTTTAAATTATACACCATA
TCCCGCTTATCGTTTTGATATCCAACTCTGCTACTCCTACACATTGGTTT
TCTCTCGCCGANGTTTCAATTATACACCATATCCCGCTTATCGTTTTGAT
ATCCAACTCTGCTACTCCTACACATTGGTTTTCTCTCGCCGAAAGTGAGA
CGTTTTCTAAGAATTCAGAATTCTATGAATACATTGATGAGAAAAGTATT
CCTGATTGTCTgtgatttaaaggttttgttttaaataagagtgatatcgt
ttgcttactcataaattttgccttacaagctttttcacattgaacgacac
ggatgtggagcaagattggtaaaaaagttgaaaagaaaaacattttttgc
ttgtaTCAGCATATTGTAAAAAtaaacactgtcctgatatgaaatatgtg
tctgatatgaaacgggaacacttatgtaaaataaaacctttaatttgaCT
GTCTTGATGTTTATTACGAGTCGATAATAGAATTAAACAAGGAAGTCTTT
AgtcatcttttgaaaattcctCAAACCCGCGAATAGCTAGGATATTTTAT
GGAGAAATGTTCCTCTGCAAGGGATTGCCCATATTTTCACATCTCTGTCC
CAGTGATCCTTCtttgtaccagagtgtatctcatgTTTATCGCttcggca
atgaattttgaaatcagccgtagatactgggtctgtgtataGACAACAGT
GATCCAAGCTCAAGGGTATGaatcaagaaaaaagaaagtgGGGCCCACTT
AAATAGAGAGAAATATCTTATTATGGATCTGTCTCATTGCCGGGCAATAA
CTGGCGGGCTTTCTCACTCGTTTTTTAGATTTGTTGAAACGGTTAAAACA
TTTAATTGTTACGATAGcaggttttattttttctgtttatgCTTTACAAT
ATTTATGTACAAACAATTTGATGAACaaatatatttaatattttgtaGAT
ATTTTAACAGTACTATATAAAAAAGATACTTGAAATTGTATTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036952XLOC_036952Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058655-exon-scaffold_312-1491911889:48827..48952TCONS_00058655-exon-scaffold_312-1491911889:48827..48952Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:48827..48952TCONS_00058655-exon-scaffold_312-1510915933:48827..48952Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:48827..48952TCONS_00058655-exon-scaffold_312-1575043694:48827..48952Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:55594..56584TCONS_00058655-exon-scaffold_312-1491911889:55594..56584Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:55594..56584TCONS_00058655-exon-scaffold_312-1510915933:55594..56584Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:55594..56584TCONS_00058655-exon-scaffold_312-1575043694:55594..56584Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:56907..57250TCONS_00058655-exon-scaffold_312-1491911889:56907..57250Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:56907..57250TCONS_00058655-exon-scaffold_312-1510915933:56907..57250Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:56907..57250TCONS_00058655-exon-scaffold_312-1575043694:56907..57250Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:57691..57798TCONS_00058655-exon-scaffold_312-1491911889:57691..57798Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:57691..57798TCONS_00058655-exon-scaffold_312-1510915933:57691..57798Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:57691..57798TCONS_00058655-exon-scaffold_312-1575043694:57691..57798Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:58016..58111TCONS_00058655-exon-scaffold_312-1491911889:58016..58111Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:58016..58111TCONS_00058655-exon-scaffold_312-1510915933:58016..58111Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:58016..58111TCONS_00058655-exon-scaffold_312-1575043694:58016..58111Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:58679..58892TCONS_00058655-exon-scaffold_312-1491911889:58679..58892Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:58679..58892TCONS_00058655-exon-scaffold_312-1510915933:58679..58892Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:58679..58892TCONS_00058655-exon-scaffold_312-1575043694:58679..58892Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:59181..59285TCONS_00058655-exon-scaffold_312-1491911889:59181..59285Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:59181..59285TCONS_00058655-exon-scaffold_312-1510915933:59181..59285Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:59181..59285TCONS_00058655-exon-scaffold_312-1575043694:59181..59285Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:59493..59661TCONS_00058655-exon-scaffold_312-1491911889:59493..59661Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:59493..59661TCONS_00058655-exon-scaffold_312-1510915933:59493..59661Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:59493..59661TCONS_00058655-exon-scaffold_312-1575043694:59493..59661Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1491911889:59973..61672TCONS_00058655-exon-scaffold_312-1491911889:59973..61672Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1510915933:59973..61672TCONS_00058655-exon-scaffold_312-1510915933:59973..61672Clytia hemisphaericaexon
TCONS_00058655-exon-scaffold_312-1575043694:59973..61672TCONS_00058655-exon-scaffold_312-1575043694:59973..61672Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_312supercontigscaffold_312:48827..61672 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000491192	0.000342632	0	0	0	0	0.00220335	0.00231568	1.43071	0.624851	1.15584	0.385584	1.68428	2.63051	0	0	4.33065	1.13411	5.69127	4.59274	2.92704	2.2732	2.48233e-06	2.01114	0.00148708	8.89178e-09	20.8373	19.5979	8.74512e-10	0.297542
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058655 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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