TCONS_00058546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058546
Unique NameTCONS_00058546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=transcript|length=1367bp
CTTTCTCAAACTTTTTCCAAATCGAACATAATTTCACACTAAGGTCAATA
TATTAGTTGACTCACTCGGTAGCGCAAAATGAAGCTGGCcagaatttttt
tacttttaatggTTCTAAAGATCCATCTTATAAATGCTCACAATATACTT
CGTCTTGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAA
AGTACCGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAG
TTTGTATGGATAGATGTGTGGCAGGTGCCCCAtgtaaatcaatcaattat
aaCTCAACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGG
GAAAGATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAA
CCCAACTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAAT
ACTTATTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAG
GTATAAACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATG
AATTTGATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTT
CTTATCAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTC
TGGCTCTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCATA
ATTTTTTGGATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCC
GATGGGACATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGG
CTCTACAATCGTCCTGGACAGAATTGTTCATCCCGTCAAATTCGAAATGA
TGCATACAACAATCTCAAATTTCGACAATTTCGAATCTGAATTTAGAAGT
AGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAATAT
CTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTATTTT
CACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAGGCGATGACTAT
GCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTTTGT
TGCTAAAAGACCAAACAACTACGCTTATTATGCTACGGATGCTAAAGgag
aaaagtttttggaaaaagaaaagttgtattACATTGAATTACTGTTTTAT
GAACATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACCTGGTGA
TGTTGATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTaccttgaa
aatattcttaaattgaCTCATACTagagtctgtctcaatataatttgcag
tggagacaaaaaaggct
Run BLAST on NCBI

protein sequence of TCONS_00058546-protein

>TCONS_00058546-protein ID=TCONS_00058546-protein|Name=TCONS_00058546-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MKLARIFLLLMVLKIHLINAHNILRLADQRSAKFLLRHDGKVPNREPYIE
FKTDSVEVCMDRCVAGAPCKSINYNSTLQTCQHVDYDINDGKDYRTKPGW
QHYDTGKTQLTRILDGTQNYCVTNTYSDPCNPGSGPYYHLRYKPITDASC
TGIEAYYEFDETLGTIKHHCSGLFLIKYIGYVTLQPESSLSGSLLTNEVY
RWRKNSHNFLDHNHQAFYPYNGLSDGTWTRYTSYNVLPGAGSTIVLDRIV
HPVKFEMMHTTISNFDNFESEFRSRFANGYQKTVYQSDFNIYPSMGDTYA
VRMQALFSPDVTGTYSFWLRGDDYALLFIGEDETPASRKFVAKRPNNYAY
YATDAKGEKFLEKEKLYYIELLFYEHFGGDWLICSMIRPGDVDRIIVSSD
HLYPLP
Run BLAST on NCBI

transcript from alignment at scaffold_311:763257..768019-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=transcript|length=4763bp|location=Sequence derived from alignment at scaffold_311:763257..768019- (Clytia hemisphaerica)
CTTTCTCAAACTTTTTCCAAATCGAACATAATTTCACACTAAGGTCAATA
TATTAGTTGACTCACTCGGTAGCGCAAAATGAAGCTGGCCAGAATTTTTT
TACTTTTAATGGTTCTAAAGATCCATCTTATAAATGCTCACAATATACTT
CGTCTTGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAA
AGTACCGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAG
TTTGTATGGATAGATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTAT
AACTCAACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGG
GAAAGATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAA
CCCAACTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAAT
ACTTATTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAG
GTATAAACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATG
AATTTGATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTT
CTTATCAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTC
TGGCTCTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCGTA
AGTTCTATACTAATTTAATTTCTATAATTCTATACTTAAATAATAGGAAG
TAAATGGGCTGTTCCATTCAAAATTCATACAGATGGTGCGGGGGGGGGGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTGAACGAACCTTTTCAATACCTTCGCAGAATTT
GCCAAAAAAAACATGGAAAATCTTTTTTGTAGGAGTATTTGCATTAATAA
AGAGAAATAAAATTTGTTCATGGTAAAGCTGCTAAAAATAGAGATAAAGA
AAATAAATTCCTAAACTAAAAACATTTGCAGGAGTTAGAAGAAGACATTA
CTGCCTTTTCAACTAACCCCTTGAAGCGAAGTTTGCTTATTTACAGTCTA
AATAGAGCGAGAAAATTAAAAGATGTTTTATGTATACTATATGTACGTGT
ATATAAAAAGTTCCTTGAACCCTCTGGAAATTCTTCTTGGGATTATCCCC
TGGAAATGTTTGTCCACCCCCATACAAAACCAGAATCCGAAAATAAGTCA
GAAAAATGTCCCGAAAATAATTCTAAAATTGCTAAAAAAACTTAAACTCT
TGAAAGAAAGTCAAAAATAATCAAAAAAATCTTACAAAATCCAAAAAAAT
GTGAAATCCTAAAATCTCAACCAAAAATCCAAAATATCTCAAAAAATTTC
ATCAAGTCTGGAGAAAAAATATTCAAGTGATCTGCCTCACAGCAATTTAA
ACAAGTTCAAAAATGCAAAAAAAATTGATTCAACGTTTATTGGCATGGGT
TGGTTAGATTCATATCGTATTATTTCTATCATTAGATAATTTTTTGGATC
ATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCCGATGGGACATGG
ACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAATCGT
CCTGGACAGAAGTATGTTGTTTTATTTATATCTTAACGATATTTCGACCA
CTTTACGTGTCTTTTTCAAGCTACTATGTACAGATTTTGATCCTATATTT
ATGGAAAAAATAGTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTT
GGCGGATGGCCAAAAAAACTAAATTTGGCGGGAATTTAATTTAGCGGTCG
TTTAAAAATTTAACCTTAAGATGGCGTCAAAACATCGAAAAAATGGCAAA
AACACCTTAAAAGAGATCATATTTTTAAATTGTTTAATTTGGCGGGAATT
TAATTTGGCGGATGGCGGAAAAAAGAAATTTTGGTGGGAACTTAATTTGG
CGGATTTCAGTCAAATCCGCCAAATCCGCCAAATTTTCTTTCCGCCAAAA
TTTCTTCCTTTAAGGTATTCATGATATGTACCACTGCATTGTCTCTAACA
TTCACAGACTCAACAGCTGGTTGAATGATTTTACGCCACTTACAATTAAC
CAATCAGATGTTGTAGTGATTCATATCATGAATATGGGTATTTACTGTAG
TTATCTAGCGAGCAAATGTCGTTATGATTTAAACCAGTATTGCAGGATAA
ATCTTTTGTCATTTGTTTGAATACCTCAAGGAAGAAATTTTGGAGGAAGT
TTTAATTTGGGAAATGGTTAGAAAATTTTAATGCGATGGTTGCATGGTAG
ATTCTTGGTAAAAATTGTTATTGCACAAGAATTTCTTAAAAGATGAGTAA
AATACAAATTAGAGTAAGTTTGAGTTTGTTGGAAAGGTTATATCCGTCAA
ATACTCTAAATGCTCTATACACCTTTTCGACCGTAGCCGCCAATTGCCGC
GCGGGCATTTTTTTGTCCGTTTTATCCCATTAAAACCGTCCCAGTCCTTT
TTTCGCATCTAAAGAGAATAGAAAAATGTGTCAAAAAAGGATTGGATCGA
GTTTAGGGGGATAATTAAATAATCAAATGGCACGCGTCTGACCGCGCGAC
TACGATCGAAAAGGTGCATTATTAAAAGCGTTTTGTTCTTATCTCTTTTC
AAAGTTGTTCATCCCGTCAAATTCGAAATGATGCATACAACAATCTCAAA
TTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTAACGGTTACC
AAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCAATGGGTGAC
ACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGTTACTGGGAC
ATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCTTTATCGGCG
AAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGACCAAACAAC
TACGCTTATTATGCTACGTAAGTATATAGATCTTTTGAATTACAAACAAT
TTAGGTTTATAGTAGGGGGCCAAGCCTGGGATTCCGTGACATCTTTTTTA
CGACCTAGCCATTTTAAGTATATTCGAAGGAACAGTATATTACAAGATAT
TTTTGAAAGGGAGGATGCAGATTAGAACGGTATGTTTTTGAACTTTGAAA
GTTAAATTCTTCTCTGAAATTTATTGTTGAAAAAAAGACAAAATTTTTTA
TCTCGCTCGGAAGTTGACCACAAAATGTTTAATCTCCCTGGGAAGTTCTT
GCTCCAGTCCTTGATAACTTTAGTTTAATACTTTAAACAAATGAAATGGA
ATCCCGGAGGGTACTAGGGTTGCGAGCTGACAGGGGGGTACCACCCGATT
TTCGAACTTTGCCCTTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAAT
TTTGGAAATTTGACCAATTTTGACCAAATTTTGATCTTTCAGGGGGTAAA
AAGTTGAAATTTTCCTATTTTTCCGACCCTTAGCGGGACTTTGGAAGTCT
TAAAAAGGTACCCTTAACCCTATTAGCCCCAGGGGGGGGGTAGAATCTAC
CACGCTGGAGTTCTTTTGTTTATATCTCAAAGAAAAATTTTTTAAACGAC
TTGAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAAAATCTAAAGAAAATTTTTGAAAATGATGACGTCATCA
TTTATGACGTCATCAAATTTTGAAAATTTTACTCATCTTCAGCATAAATT
TTAAGAAAAACTCTTCATGGAAATTGCAAAACCATTAATTATGTTAAAGA
ACAGTCTTTTACCTTTCAGAATCTTCAAACAGAATTGAAATATCTTTATT
GGTTCAACTGTAATAGACATTTTTGTAAACCATATATTTGGACTTTTTTC
CGAAAGGTGGAAAATTTGTGATGACGTCATCAGTTTTTGCATGACGTCAT
CAAAATTTTTTTTCTTCCTGGAAAATTGTATCATGATGGAGAACATCTGT
ACCAAATTTCATGGCCATAGCTCTTCTAGATCGAAAATAATCGAGGGTGG
TAGATTCTACCCCCCCTGGGGATACAAAAGTCAAAAAAGCTTGGGGCTAA
TAGGGTTAAGGGCGGCACTAAATATAAATATAAAGGAATTATTGGAATAA
ATTTAAAGGATTTATCGTACAAGAAAGAAAATATAAGAACAGTTATACAA
CTTCGGAATTCTATTGATTTTCTTCCTTTTAGGGATGCTAAAGGAGAAAA
GTTTTTGGAAAAAGAAAAGTTGTATTACATTGAATTACTGTTTTATGAAC
ATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACCTGGTGATGTT
GATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTACCTTGAAAATA
TTCTTAAATTGACTCATACTAGAGTCTGTCTCAATATAATTTGCAGTGGA
GACAAAAAAGGCT

Coding sequence (CDS) from alignment at scaffold_311:763257..768019-

>TCONS_00058546 ID=TCONS_00058546|Name=TCONS_00058546|organism=Clytia hemisphaerica|type=CDS|length=4884bp|location=Sequence derived from alignment at scaffold_311:763257..768019- (Clytia hemisphaerica)
GGATGCTAAAGGAGAAAAGTTTTTGGAAAAAGAAAAGTTGTATTACATTG
AATTACTGTTTTATGAACATTTTGGCGGTGATTGGTTAATTTGTTCCATG
ATTCGACCTGGTGATGTTGATCGAATAATTGTATCGTCAGATCATTTGTA
CCCTCTACCTTGATTGTTCATCCCGTCAAATTCGAAATGATGCATACAAC
AATCTCAAATTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTA
ACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCA
ATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGT
TACTGGGACATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCT
TTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGA
CCAAACAACTACGCTTATTATGCTACATAATTTTTTGGATCATAACCATC
AAGCTTTTTATCCGTATAACGGCCTATCCGATGGGACATGGACTCGGTAC
ACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAATCGTCCTGGACAG
AAATGAAGCTGGCCAGAATTTTTTTACTTTTAATGGTTCTAAAGATCCAT
CTTATAAATGCTCACAATATACTTCGTCTTGCTGACCAACGTTCTGCAAA
ATTCCTTCTTCGACATGATGGTAAAGTACCGAACAGAGAACCATATATTG
AATTCAAAACTGATTCCGTTGAAGTTTGTATGGATAGATGTGTGGCAGGT
GCCCCATGTAAATCAATCAATTATAACTCAACTCTCCAAACCTGTCAACA
TGTTGACTACGATATTAATGACGGGAAAGATTACAGAACAAAGCCGGGAT
GGCAGCACTACGACACCGGAAAAACCCAACTGACACGGATCTTGGATGGA
ACACAAAATTATTGTGTCACCAATACTTATTCAGATCCTTGTAACCCTGG
GTCCGGCCCCTATTATCATTTAAGGTATAAACCAATAACAGATGCATCTT
GTACTGGAATCGAGGCTTATTATGAATTTGATGAAACACTGGGTACGATT
AAGCATCATTGTTCTGGTCTTTTTCTTATCAAATACATAGGATACGTGAC
GCTTCAACCGGAAAGCTCACTTTCTGGCTCTTTACTGACTAATGAAGTTT
ATCGTTGGCGGAAAAACTCTCGGATGCTAAAGGAGAAAAGTTTTTGGAAA
AAGAAAAGTTGTATTACATTGAATTACTGTTTTATGAACATTTTGGCGGT
GATTGGTTAATTTGTTCCATGATTCGACCTGGTGATGTTGATCGAATAAT
TGTATCGTCAGATCATTTGTACCCTCTACCTTGATTGTTCATCCCGTCAA
ATTCGAAATGATGCATACAACAATCTCAAATTTCGACAATTTCGAATCTG
AATTTAGAAGTAGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCA
GATTTCAATATCTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCA
AGCTTTATTTTCACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAG
GCGATGACTATGCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGC
AGAAAGTTTGTTGCTAAAAGACCAAACAACTACGCTTATTATGCTACATA
ATTTTTTGGATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCC
GATGGGACATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGG
CTCTACAATCGTCCTGGACAGAAATGAAGCTGGCCAGAATTTTTTTACTT
TTAATGGTTCTAAAGATCCATCTTATAAATGCTCACAATATACTTCGTCT
TGCTGACCAACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAAAGTAC
CGAACAGAGAACCATATATTGAATTCAAAACTGATTCCGTTGAAGTTTGT
ATGGATAGATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTATAACTC
AACTCTCCAAACCTGTCAACATGTTGACTACGATATTAATGACGGGAAAG
ATTACAGAACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAACCCAA
CTGACACGGATCTTGGATGGAACACAAAATTATTGTGTCACCAATACTTA
TTCAGATCCTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAGGTATA
AACCAATAACAGATGCATCTTGTACTGGAATCGAGGCTTATTATGAATTT
GATGAAACACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTTCTTAT
CAAATACATAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTCTGGCT
CTTTACTGACTAATGAAGTTTATCGTTGGCGGAAAAACTCTCGGATGCTA
AAGGAGAAAAGTTTTTGGAAAAAGAAAAGTTGTATTACATTGAATTACTG
TTTTATGAACATTTTGGCGGTGATTGGTTAATTTGTTCCATGATTCGACC
TGGTGATGTTGATCGAATAATTGTATCGTCAGATCATTTGTACCCTCTAC
CTTGATTGTTCATCCCGTCAAATTCGAAATGATGCATACAACAATCTCAA
ATTTCGACAATTTCGAATCTGAATTTAGAAGTAGATTTGCTAACGGTTAC
CAAAAGACAGTCTATCAATCAGATTTCAATATCTACCCGTCAATGGGTGA
CACTTATGCTGTTCGGATGCAAGCTTTATTTTCACCGGACGTTACTGGGA
CATACTCTTTTTGGCTAAGAGGCGATGACTATGCTTTACTCTTTATCGGC
GAAGATGAAACTCCTGCCAGCAGAAAGTTTGTTGCTAAAAGACCAAACAA
CTACGCTTATTATGCTACATAATTTTTTGGATCATAACCATCAAGCTTTT
TATCCGTATAACGGCCTATCCGATGGGACATGGACTCGGTACACATCTTA
TAACGTCTTACCTGGAGCTGGCTCTACAATCGTCCTGGACAGAAATGAAG
CTGGCCAGAATTTTTTTACTTTTAATGGTTCTAAAGATCCATCTTATAAA
TGCTCACAATATACTTCGTCTTGCTGACCAACGTTCTGCAAAATTCCTTC
TTCGACATGATGGTAAAGTACCGAACAGAGAACCATATATTGAATTCAAA
ACTGATTCCGTTGAAGTTTGTATGGATAGATGTGTGGCAGGTGCCCCATG
TAAATCAATCAATTATAACTCAACTCTCCAAACCTGTCAACATGTTGACT
ACGATATTAATGACGGGAAAGATTACAGAACAAAGCCGGGATGGCAGCAC
TACGACACCGGAAAAACCCAACTGACACGGATCTTGGATGGAACACAAAA
TTATTGTGTCACCAATACTTATTCAGATCCTTGTAACCCTGGGTCCGGCC
CCTATTATCATTTAAGGTATAAACCAATAACAGATGCATCTTGTACTGGA
ATCGAGGCTTATTATGAATTTGATGAAACACTGGGTACGATTAAGCATCA
TTGTTCTGGTCTTTTTCTTATCAAATACATAGGATACGTGACGCTTCAAC
CGGAAAGCTCACTTTCTGGCTCTTTACTGACTAATGAAGTTTATCGTTGG
CGGAAAAACTCTCGGATGCTAAAGGAGAAAAGTTTTTGGAAAAAGAAAAG
TTGTATTACATTGAATTACTGTTTTATGAACATTTTGGCGGTGATTGGTT
AATTTGTTCCATGATTCGACCTGGTGATGTTGATCGAATAATTGTATCGT
CAGATCATTTGTACCCTCTACCTTGATTGTTCATCCCGTCAAATTCGAAA
TGATGCATACAACAATCTCAAATTTCGACAATTTCGAATCTGAATTTAGA
AGTAGATTTGCTAACGGTTACCAAAAGACAGTCTATCAATCAGATTTCAA
TATCTACCCGTCAATGGGTGACACTTATGCTGTTCGGATGCAAGCTTTAT
TTTCACCGGACGTTACTGGGACATACTCTTTTTGGCTAAGAGGCGATGAC
TATGCTTTACTCTTTATCGGCGAAGATGAAACTCCTGCCAGCAGAAAGTT
TGTTGCTAAAAGACCAAACAACTACGCTTATTATGCTACATAATTTTTTG
GATCATAACCATCAAGCTTTTTATCCGTATAACGGCCTATCCGATGGGAC
ATGGACTCGGTACACATCTTATAACGTCTTACCTGGAGCTGGCTCTACAA
TCGTCCTGGACAGAAATGAAGCTGGCCAGAATTTTTTTACTTTTAATGGT
TCTAAAGATCCATCTTATAAATGCTCACAATATACTTCGTCTTGCTGACC
AACGTTCTGCAAAATTCCTTCTTCGACATGATGGTAAAGTACCGAACAGA
GAACCATATATTGAATTCAAAACTGATTCCGTTGAAGTTTGTATGGATAG
ATGTGTGGCAGGTGCCCCATGTAAATCAATCAATTATAACTCAACTCTCC
AAACCTGTCAACATGTTGACTACGATATTAATGACGGGAAAGATTACAGA
ACAAAGCCGGGATGGCAGCACTACGACACCGGAAAAACCCAACTGACACG
GATCTTGGATGGAACACAAAATTATTGTGTCACCAATACTTATTCAGATC
CTTGTAACCCTGGGTCCGGCCCCTATTATCATTTAAGGTATAAACCAATA
ACAGATGCATCTTGTACTGGAATCGAGGCTTATTATGAATTTGATGAAAC
ACTGGGTACGATTAAGCATCATTGTTCTGGTCTTTTTCTTATCAAATACA
TAGGATACGTGACGCTTCAACCGGAAAGCTCACTTTCTGGCTCTTTACTG
ACTAATGAAGTTTATCGTTGGCGGAAAAACTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036879XLOC_036879Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058546-exon-scaffold_311-1575043694:767323..768019TCONS_00058546-exon-scaffold_311-1575043694:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:766309..766434TCONS_00058546-exon-scaffold_311-1575043694:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:764953..765265TCONS_00058546-exon-scaffold_311-1575043694:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1575043694:763257..763487TCONS_00058546-exon-scaffold_311-1575043694:763257..763487Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:767323..768019TCONS_00058546-exon-scaffold_311-1510915933:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:766309..766434TCONS_00058546-exon-scaffold_311-1510915933:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:764953..765265TCONS_00058546-exon-scaffold_311-1510915933:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1510915933:763257..763487TCONS_00058546-exon-scaffold_311-1510915933:763257..763487Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:767323..768019TCONS_00058546-exon-scaffold_311-1491911889:767323..768019Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:766309..766434TCONS_00058546-exon-scaffold_311-1491911889:766309..766434Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:764953..765265TCONS_00058546-exon-scaffold_311-1491911889:764953..765265Clytia hemisphaericaexon
TCONS_00058546-exon-scaffold_311-1491911889:763257..763487TCONS_00058546-exon-scaffold_311-1491911889:763257..763487Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058546-proteinTCONS_00058546-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:763257..768019 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.254175	0.0979449	0	0.0368753	0	0.159894	0.279355	0.0408083	4.04195	3.47031	0.208761	0.317379	0.148301	0.282881	6.83926	8.90459	0.17773	0.260071	0.0702558	0.095809	0.888129	1.50463	0.546124	0.269002	0	0.069291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011658PA14_dom
IPR008979Galactose-bd-like
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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