TCONS_00058509 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058509
Unique NameTCONS_00058509
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058509 ID=TCONS_00058509|Name=TCONS_00058509|organism=Clytia hemisphaerica|type=transcript|length=2211bp
CGGAGATTCTTTGACAGACTTAACTACCATAAGGCATTCAAATTGCACAG
TTTTAATAGCAAATGAACGGGAGAGATGTGACATATGTAATAGTTATAGA
GCAGCTTTACATGCAATGCAGTCGCGAAAACGAAACAGCACAGGAGAGGT
TAGTGAATACACCAATGACCGATACCTCAATGTGCAGCAGTTAAGAGAAA
AACTGCAAAAGTATGAAACTGAAAGAAAGGCATTAAAGTCAAAGATAAGG
AGGATGGATGATAGGATAAAAAGATGTGTTATGGAAGACGGTGTCACCTT
AGATGGAGAGCAATATGATATTTTAAAACAGACAGTTGAGGACAAAGAAA
ATCCATTTGGTGAGGACAGTCCACAACACTTATTATGGgagcaacaaaaa
aaatatgctgCATTAAAAGACAAACNCACAACACTTATTATGGGAGCAAC
AGAAAAAGTATGCTGCATTAAAAGACAGATGAGGTATGAGGTGGCACCCT
TTGATTATAAGATGGTGTATTGGGATCTACCTTAAAAGTCCAGGGACATA
CAAAGGACAATTACAGCAATTTTTGAATCTGCCATCAAAGAACACCTTAC
TAAAATACATTAACTATACTGATCCTGGGTGTGGTTTCAATCCTGACACT
ATTGCAAATATTGCCAGACAATTTGACGCCCTTGAAAAACCTCATCAAAG
TTTTGTTTCCTTGGTTGTTGATGAAATGAAGATCAAGAGTGGGCTTTGTT
TCAGCACCTCTACTGGGAAAATTGTTGGTTTGTGTGAAGAAGGGTCTATA
AATGATCTTCTGTCCGAATTTGAGCTTAAATACAGTGAAGAGGAGTCTGA
AAACCAACGCCCCCTTGACAGTACCGACAGGGAACTTGCTAGCTATGCCA
CAGCACTCATGGTCAGAGGAATTTCTTCAAACTTATTTTATGTCTTTGGA
CACTTTGCTTCCAGCTCTGGAATGACAAGCAGTCAGCTGTACCATGTTAT
TTGGGAGGGTATCAGTTTATTGGAGTCCATTGATTTGAAGGTGTTGGCCA
TAGTTGCCGATGGTGCCTCAACAAACCGAAAGTTTTTCAAACTCCATAAT
TGGGAAACGAAAGAAAACTTTAGTCCAGAAAATGTTATCTATTGGACATG
GAATGAATGTTGcccaaCTCGAAAATTGTATTTCATATGTGATCCTCCCC
ATCTGATGAAAACCACCAGAAACAACTTGGAGAAGTCAAGCTCAAAGTCT
ACTTCTAGAAATCTAATGtGTGATGGTCAAAGTTTATCCTGGGGTCAAAT
AATAAATCTTTATGAATGGGATTTAGGGATGGAGAGAGATGCCATTGGTC
TGACAATGGGTCACCATTTGACTGAGGAGCATATCAATTTGAATCCGAGA
TCACGCATGAGAGTTTACTTAGCAGTGCAAGTTCTCAGTGCTACTGTAGT
CAACATGTTGGATGAGCAGGATCTCCATACCACAAAATCTTTGAGGACAT
TTATTTCCCACATGAACAGATTCTTCGATTGTTTAAACGTCTCCAAGTCT
GATGAAAAATCTAACAACCTAGATAAGCACAAGTACAGGGGAGCAGACGA
CGAACGCTTTGGGTGGTTGGTCACAACATTTTTGAAGTACCTTAATGATT
GGGAGGCGCACTGCTACAGCATCCCAAATTTGACgaaaattgaacaatca
aaattatgtCTCAGTCACCAAACACTGGAAGGACTTCGAATAACAGTTCG
TTCATTCATCGAAGTATCAAAAGTGATGTTCAACGAAGGTGCCAAATATA
TTCTATCAGAGAAATTAAGTCAGGATCCACTTGAGGAATATTTTGGGAAG
CAGAGAATGCGACTCGGATGTAATGAGAATCCAACGCTTAGTCAGTTTAA
TTTTAATGCTCTCGCAATCGGAGTTGCTGGCGATTTATTGGTTCGACCTG
AAGGGAACAGTCGGGGTAAACATAACGAGCAGAAAATCATCGACGTTAAC
GATATGTCACTTCCCCCCAAAAAGAAGACAAAACCTTCTTAAAAACCACT
CAGTACAAACAATCGAAGTTTATaaacattttagaatttttaatcCTGAT
GATAAGCGAAACTGTCATAGCagctaaataattttttgtctgttctttac
tgattgatataattttgtttaTGAATTTTTGTCAACTGAACAAtaatatt
acatattacaa
Run BLAST on NCBI

protein sequence of TCONS_00058509-protein

>TCONS_00058509-protein ID=TCONS_00058509-protein|Name=TCONS_00058509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MRWHPLIIRWCIGIYLKSPGTYKGQLQQFLNLPSKNTLLKYINYTDPGCG
FNPDTIANIARQFDALEKPHQSFVSLVVDEMKIKSGLCFSTSTGKIVGLC
EEGSINDLLSEFELKYSEEESENQRPLDSTDRELASYATALMVRGISSNL
FYVFGHFASSSGMTSSQLYHVIWEGISLLESIDLKVLAIVADGASTNRKF
FKLHNWETKENFSPENVIYWTWNECCPTRKLYFICDPPHLMKTTRNNLEK
SSSKSTSRNLMCDGQSLSWGQIINLYEWDLGMERDAIGLTMGHHLTEEHI
NLNPRSRMRVYLAVQVLSATVVNMLDEQDLHTTKSLRTFISHMNRFFDCL
NVSKSDEKSNNLDKHKYRGADDERFGWLVTTFLKYLNDWEAHCYSIPNLT
KIEQSKLCLSHQTLEGLRITVRSFIEVSKVMFNEGAKYILSEKLSQDPLE
EYFGKQRMRLGCNENPTLSQFNFNALAIGVAGDLLVRPEGNSRGKHNEQK
IIDVNDMSLPPKKKTKPS
Run BLAST on NCBI

transcript from alignment at scaffold_311:30561..34049-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058509 ID=TCONS_00058509|Name=TCONS_00058509|organism=Clytia hemisphaerica|type=transcript|length=3489bp|location=Sequence derived from alignment at scaffold_311:30561..34049- (Clytia hemisphaerica)
CGGAGATTCTTTGACAGACTTAACTACCATAAGGCATTCAAATTGCACAG TTTTAATAGCAAATGAACGGGAGAGATGTGACATATGTAATAGTTATAGA GCAGCTTTACATGCAATGCAGTCGCGAAAACGAAACAGCACAGGAGAGGT TAGTGAATACACCAATGACCGATACCTCAATGTGCAGCAGTTAAGAGAAA AACTGCAAAAGTATGAAACTGAAAGAAAGGCATTAAAGTCAAAGATAAGG AGGATGGATGATAGGATAAAAAGATGTGTTATGGAAGACGGTGTCACCTT AGATGGAGAGCAATATGATATTTTAAAACAGACAGTTGAGGACAAAGAAA ATCCATTTGGTGAGGACAGTCCACAACACTTATTATGGGAGCAACAAAAA AAATATGCTGCATTAAAAGACAAACNCACAACACTTATTATGGGAGCAAC AGAAAAAGTATGCTGCATTAAAAGACAGATGAGGTATGAGGTGGCACCCT TTGATTATAAGATGGTGTATTGGGATCTACCTTAAAAGTCCAGGGACATA CAAAGGACAATTACAGCAATTTTTGAATCTGCCATCAAAGAACACCTTAC TAAAATACATTAACTATACTGATCCTGGGTGTGGTTTCAATCCTGACACT ATTGCAAATATTGCCAGACAATTTGACGCCCTTGAAAAACCTCATCAAAG TTTTGTTTCCTTGGTTGTTGATGAAATGAAGATCAAGAGTGGGCTTTGTT TCAGCACCTCTACTGGGAAAATTGTTGGTTTGTGTGAAGAAGGGTCTATA AATGATCTTCTGTCCGAATTTGAGCTTAAATACAGTGAAGAGGAGTCTGA AAACCAACGCCCCCTTGACAGTACCGACAGGGAACTTGCTAGCTATGCCA CAGCACTCATGGTCAGAGGAATTTCTTCAAACTTATTTTATGTCTTTGGA CACTTTGCTTCCAGCTCTGGAATGACAAGCAGTCAGCTGTACCATGTTAT TTGGGAGGGTATCAGTTTATTGGAGTCCATTGATTTGAAGGTGTTGGCCA TAGTTGCCGATGGTGCCTCAACAAACCGAAAGTTTTTCAAACTCCATAAT TGGGAAACGAAAGAAAACTTTAGTCCAGAAAATGTTATCTATTGGACATG GAATGAATGTTGCCCAAGTATTTTTTTAATTATATTATTTTTGCTCTGTA TCCCACAATATTATTGTGTCTATCTTGTCCACAAATATCAACTAAAGGCC AAAAATCTGTAAAATGTAAAATTATTAAGGTATATGCCGCCAGCCATAAC ACAGTCATTAAAAAGGTAATGAAGAATAGAGTGATACTTCATATTTTCTT GGTTTTTAATGGTTTACTTTTCATTGCAGCTCGAAAATTGTATTTCATAT GTGATCCTCCCCATCTGATGAAAACCACCAGAAACAACTTGGAGAAGTCA AGCTCAAAGTCTACTTCTAGAAATCTAATGGTATGTAATTCAATATAAAC TAATTACCACAATCAAAGAGGAGACTTCTATGTTGTTGTGATATTTTAAA ACTCATTTCAATAACTTAACTTTTTTTTTTTCTGTTTTTAGTGTGATGGT CAAAGTTTATCCTGGGGTCAAATAATAAATCTTTATGAATGGGATTTAGG GATGGAGAGAGATGCCATTGGTCTGACAATGGGTCACCATTTGACTGAGG AGCATATCAATTTGAATCCGAGATCACGCATGAGAGTTTACTTAGCAGTG CAAGTAAGTGAATCAAGATTGATTTTTTAGCTTTTCATCTCTTAAAAATT ATTTGATAAAAATTGATTTGAATGATGTTATTTTAATGTTACTTTTACCA TTGAATTTTATGCATATTATTTTGTATAAAAAACATGAAATTTGATTTTC AGAGGCTCCAATTTCTTTAACTTTTTTTTGCACTGTAAGCCTCAAATTAT TTATTTCCTATTCTAGAAGTGTTTTAGTCAATTTTAGCTTTAGTCTGATT TTATTTTGACATTTCTGACAAGAATTAAAAACAGTTCAAGAACAAGCCTA AAGACTAGAATGTGTAATTATTTGGCCATTGGCTCATTGTTCTTATAAAA CTGTTCGTATAAAAAGAGTGTATGTAAATGCATTTGTATTAATTAGCCAT TAAAAATTACACAGATTATGTACATTTTTTTTAGGTTCTCAGTGCTACTG TAGTCAACATGTTGGATGAGCAGGATCTCCATACCACAAAATCTTTGAGG ACATTTATTTCCCACATGAACAGATTCTTCGATTGTTTAAACGTCTCCAA GTCTGATGAAAAATCTAACAACCTAGATAAGCACAAGTACAGGGGAGCAG ACGACGAACGCTTTGGGGTAAGTATTAACTTTGGCTCATGTTTTCTTATC ATTCTTTTTTAAATCCATCCCCCCCGAAGAAAAAAAATCCTGTAGTTCCC CCTCCTTGAGAAGCACTTTGCCCCCCCCCGTAGCAGTTTTCTGTAGAAAA AACAAGGGGTCACTATGTAAAGGAGATATTTTTTTAGGTTCATGGTAAAC TTCTGACAATAATCGAACATATTTTTTACTTATTCTTTCTACAGTGGTTG GTCACAACATTTTTGAAGTACCTTAATGATTGGGAGGCGCACTGCTACAG CATCCCAAATTTGACGAAAATTGAACAATCAAAATTATGTCTCAGTCACC AAACACTGGAAGGACTTCGAATAACAGGTAAATTCTATTGCAAACTCAAT TTAATTTAGAAAATTGTATAACGAAATCGCAATATCTTAACCAATAGATG AAAAATCTTCCAAGAGCTAATAATAAGCTCATGGACATGATAGCCTTAGT CTGATGTTTGAACCCAGGACCCAGACCTTGACGACCAACGCTTGAGTTTT GAAATAATTGTACCCTTTCAGATACAAAAACTTATACCTTTTTCCGAATT TTACCTAAAGAGTAACCCTCACGGGTGTTAAGAATTTGTTTTGAATACAT GTCATTTTTGTATTTTGATTATAGTTCGTTCATTCATCGAAGTATCAAAA GTGATGTTCAACGAAGGTGCCAAATATATTCTATCAGAGAAATTAAGTCA GGATCCACTTGAGGAATATTTTGGGAAGCAGAGAATGCGACTCGGATGTA ATGAGAATCCAACGCTTAGTCAGTTTAATTTTAATGCTCTCGCAATCGGA GTTGCTGGCGATTTATTGGTTCGACCTGAAGGGAACAGTCGGGGTAAACA TAACGAGCAGAAAATCATCGACGTTAACGATATGTCACTTCCCCCCAAAA AGAAGACAAAACCTTCTTAAAAACCACTCAGTACAAACAATCGAAGTTTA TAAACATTTTAGAATTTTTAATCCTGATGATAAGCGAAACTGTCATAGCA GCTAAATAATTTTTTGTCTGTTCTTTACTGATTGATATAATTTTGTTTAT GAATTTTTGTCAACTGAACAATAATATTACATATTACAA

Coding sequence (CDS) from alignment at scaffold_311:30561..34049-

>TCONS_00058509 ID=TCONS_00058509|Name=TCONS_00058509|organism=Clytia hemisphaerica|type=CDS|length=9342bp|location=Sequence derived from alignment at scaffold_311:30561..34049- (Clytia hemisphaerica)
TTCGTTCATTCATCGAAGTATCAAAAGTGATGTTCAACGAAGGTGCCAAA
TATATTCTATCAGAGAAATTAAGTCAGGATCCACTTGAGGAATATTTTGG
GAAGCAGAGAATGCGACTCGGATGTAATGAGAATCCAACGCTTAGTCAGT
TTAATTTTAATGCTCTCGCAATCGGAGTTGCTGGCGATTTATTGGTTCGA
CCTGAAGGGAACAGTCGGGGTAAACATAACGAGCAGAAAATCATCGACGT
TAACGATATGTCACTTCCCCCCAAAAAGAAGACAAAACCTTCTTAATGGT
TGGTCACAACATTTTTGAAGTACCTTAATGATTGGGAGGCGCACTGCTAC
AGCATCCCAAATTTGACGAAAATTGAACAATCAAAATTATGTCTCAGTCA
CCAAACACTGGAAGGACTTCGAATAACAGGTTCTCAGTGCTACTGTAGTC
AACATGTTGGATGAGCAGGATCTCCATACCACAAAATCTTTGAGGACATT
TATTTCCCACATGAACAGATTCTTCGATTGTTTAAACGTCTCCAAGTCTG
ATGAAAAATCTAACAACCTAGATAAGCACAAGTACAGGGGAGCAGACGAC
GAACGCTTTGGGTGTGATGGTCAAAGTTTATCCTGGGGTCAAATAATAAA
TCTTTATGAATGGGATTTAGGGATGGAGAGAGATGCCATTGGTCTGACAA
TGGGTCACCATTTGACTGAGGAGCATATCAATTTGAATCCGAGATCACGC
ATGAGAGTTTACTTAGCAGTGCAACTCGAAAATTGTATTTCATATGTGAT
CCTCCCCATCTGATGAAAACCACCAGAAACAACTTGGAGAAGTCAAGCTC
AAAGTCTACTTCTAGAAATCTAATGATGAGGTGGCACCCTTTGATTATAA
GATGGTGTATTGGGATCTACCTTAAAAGTCCAGGGACATACAAAGGACAA
TTACAGCAATTTTTGAATCTGCCATCAAAGAACACCTTACTAAAATACAT
TAACTATACTGATCCTGGGTGTGGTTTCAATCCTGACACTATTGCAAATA
TTGCCAGACAATTTGACGCCCTTGAAAAACCTCATCAAAGTTTTGTTTCC
TTGGTTGTTGATGAAATGAAGATCAAGAGTGGGCTTTGTTTCAGCACCTC
TACTGGGAAAATTGTTGGTTTGTGTGAAGAAGGGTCTATAAATGATCTTC
TGTCCGAATTTGAGCTTAAATACAGTGAAGAGGAGTCTGAAAACCAACGC
CCCCTTGACAGTACCGACAGGGAACTTGCTAGCTATGCCACAGCACTCAT
GGTCAGAGGAATTTCTTCAAACTTATTTTATGTCTTTGGACACTTTGCTT
CCAGCTCTGGAATGACAAGCAGTCAGCTGTACCATGTTATTTGGGAGGGT
ATCAGTTTATTGGAGTCCATTGATTTGAAGGTGTTGGCCATAGTTGCCGA
TGGTGCCTCAACAAACCGAAAGTTTTTCAAACTCCATAATTGGGAAACGA
AAGAAAACTTTAGTCCAGAAAATGTTATCTATTGGACATGGAATGAATGT
TGCCCAATTCGTTCATTCATCGAAGTATCAAAAGTGATGTTCAACGAAGG
TGCCAAATATATTCTATCAGAGAAATTAAGTCAGGATCCACTTGAGGAAT
ATTTTGGGAAGCAGAGAATGCGACTCGGATGTAATGAGAATCCAACGCTT
AGTCAGTTTAATTTTAATGCTCTCGCAATCGGAGTTGCTGGCGATTTATT
GGTTCGACCTGAAGGGAACAGTCGGGGTAAACATAACGAGCAGAAAATCA
TCGACGTTAACGATATGTCACTTCCCCCCAAAAAGAAGACAAAACCTTCT
TAATGGTTGGTCACAACATTTTTGAAGTACCTTAATGATTGGGAGGCGCA
CTGCTACAGCATCCCAAATTTGACGAAAATTGAACAATCAAAATTATGTC
TCAGTCACCAAACACTGGAAGGACTTCGAATAACAGGTTCTCAGTGCTAC
TGTAGTCAACATGTTGGATGAGCAGGATCTCCATACCACAAAATCTTTGA
GGACATTTATTTCCCACATGAACAGATTCTTCGATTGTTTAAACGTCTCC
AAGTCTGATGAAAAATCTAACAACCTAGATAAGCACAAGTACAGGGGAGC
AGACGACGAACGCTTTGGGTGTGATGGTCAAAGTTTATCCTGGGGTCAAA
TAATAAATCTTTATGAATGGGATTTAGGGATGGAGAGAGATGCCATTGGT
CTGACAATGGGTCACCATTTGACTGAGGAGCATATCAATTTGAATCCGAG
ATCACGCATGAGAGTTTACTTAGCAGTGCAACTCGAAAATTGTATTTCAT
ATGTGATCCTCCCCATCTGATGAAAACCACCAGAAACAACTTGGAGAAGT
CAAGCTCAAAGTCTACTTCTAGAAATCTAATGATGAGGTGGCACCCTTTG
ATTATAAGATGGTGTATTGGGATCTACCTTAAAAGTCCAGGGACATACAA
AGGACAATTACAGCAATTTTTGAATCTGCCATCAAAGAACACCTTACTAA
AATACATTAACTATACTGATCCTGGGTGTGGTTTCAATCCTGACACTATT
GCAAATATTGCCAGACAATTTGACGCCCTTGAAAAACCTCATCAAAGTTT
TGTTTCCTTGGTTGTTGATGAAATGAAGATCAAGAGTGGGCTTTGTTTCA
GCACCTCTACTGGGAAAATTGTTGGTTTGTGTGAAGAAGGGTCTATAAAT
GATCTTCTGTCCGAATTTGAGCTTAAATACAGTGAAGAGGAGTCTGAAAA
CCAACGCCCCCTTGACAGTACCGACAGGGAACTTGCTAGCTATGCCACAG
CACTCATGGTCAGAGGAATTTCTTCAAACTTATTTTATGTCTTTGGACAC
TTTGCTTCCAGCTCTGGAATGACAAGCAGTCAGCTGTACCATGTTATTTG
GGAGGGTATCAGTTTATTGGAGTCCATTGATTTGAAGGTGTTGGCCATAG
TTGCCGATGGTGCCTCAACAAACCGAAAGTTTTTCAAACTCCATAATTGG
GAAACGAAAGAAAACTTTAGTCCAGAAAATGTTATCTATTGGACATGGAA
TGAATGTTGCCCAATTCGTTCATTCATCGAAGTATCAAAAGTGATGTTCA
ACGAAGGTGCCAAATATATTCTATCAGAGAAATTAAGTCAGGATCCACTT
GAGGAATATTTTGGGAAGCAGAGAATGCGACTCGGATGTAATGAGAATCC
AACGCTTAGTCAGTTTAATTTTAATGCTCTCGCAATCGGAGTTGCTGGCG
ATTTATTGGTTCGACCTGAAGGGAACAGTCGGGGTAAACATAACGAGCAG
AAAATCATCGACGTTAACGATATGTCACTTCCCCCCAAAAAGAAGACAAA
ACCTTCTTAATGGTTGGTCACAACATTTTTGAAGTACCTTAATGATTGGG
AGGCGCACTGCTACAGCATCCCAAATTTGACGAAAATTGAACAATCAAAA
TTATGTCTCAGTCACCAAACACTGGAAGGACTTCGAATAACAGGTTCTCA
GTGCTACTGTAGTCAACATGTTGGATGAGCAGGATCTCCATACCACAAAA
TCTTTGAGGACATTTATTTCCCACATGAACAGATTCTTCGATTGTTTAAA
CGTCTCCAAGTCTGATGAAAAATCTAACAACCTAGATAAGCACAAGTACA
GGGGAGCAGACGACGAACGCTTTGGGTGTGATGGTCAAAGTTTATCCTGG
GGTCAAATAATAAATCTTTATGAATGGGATTTAGGGATGGAGAGAGATGC
CATTGGTCTGACAATGGGTCACCATTTGACTGAGGAGCATATCAATTTGA
ATCCGAGATCACGCATGAGAGTTTACTTAGCAGTGCAACTCGAAAATTGT
ATTTCATATGTGATCCTCCCCATCTGATGAAAACCACCAGAAACAACTTG
GAGAAGTCAAGCTCAAAGTCTACTTCTAGAAATCTAATGATGAGGTGGCA
CCCTTTGATTATAAGATGGTGTATTGGGATCTACCTTAAAAGTCCAGGGA
CATACAAAGGACAATTACAGCAATTTTTGAATCTGCCATCAAAGAACACC
TTACTAAAATACATTAACTATACTGATCCTGGGTGTGGTTTCAATCCTGA
CACTATTGCAAATATTGCCAGACAATTTGACGCCCTTGAAAAACCTCATC
AAAGTTTTGTTTCCTTGGTTGTTGATGAAATGAAGATCAAGAGTGGGCTT
TGTTTCAGCACCTCTACTGGGAAAATTGTTGGTTTGTGTGAAGAAGGGTC
TATAAATGATCTTCTGTCCGAATTTGAGCTTAAATACAGTGAAGAGGAGT
CTGAAAACCAACGCCCCCTTGACAGTACCGACAGGGAACTTGCTAGCTAT
GCCACAGCACTCATGGTCAGAGGAATTTCTTCAAACTTATTTTATGTCTT
TGGACACTTTGCTTCCAGCTCTGGAATGACAAGCAGTCAGCTGTACCATG
TTATTTGGGAGGGTATCAGTTTATTGGAGTCCATTGATTTGAAGGTGTTG
GCCATAGTTGCCGATGGTGCCTCAACAAACCGAAAGTTTTTCAAACTCCA
TAATTGGGAAACGAAAGAAAACTTTAGTCCAGAAAATGTTATCTATTGGA
CATGGAATGAATGTTGCCCAATTCGTTCATTCATCGAAGTATCAAAAGTG
ATGTTCAACGAAGGTGCCAAATATATTCTATCAGAGAAATTAAGTCAGGA
TCCACTTGAGGAATATTTTGGGAAGCAGAGAATGCGACTCGGATGTAATG
AGAATCCAACGCTTAGTCAGTTTAATTTTAATGCTCTCGCAATCGGAGTT
GCTGGCGATTTATTGGTTCGACCTGAAGGGAACAGTCGGGGTAAACATAA
CGAGCAGAAAATCATCGACGTTAACGATATGTCACTTCCCCCCAAAAAGA
AGACAAAACCTTCTTAATGGTTGGTCACAACATTTTTGAAGTACCTTAAT
GATTGGGAGGCGCACTGCTACAGCATCCCAAATTTGACGAAAATTGAACA
ATCAAAATTATGTCTCAGTCACCAAACACTGGAAGGACTTCGAATAACAG
GTTCTCAGTGCTACTGTAGTCAACATGTTGGATGAGCAGGATCTCCATAC
CACAAAATCTTTGAGGACATTTATTTCCCACATGAACAGATTCTTCGATT
GTTTAAACGTCTCCAAGTCTGATGAAAAATCTAACAACCTAGATAAGCAC
AAGTACAGGGGAGCAGACGACGAACGCTTTGGGTGTGATGGTCAAAGTTT
ATCCTGGGGTCAAATAATAAATCTTTATGAATGGGATTTAGGGATGGAGA
GAGATGCCATTGGTCTGACAATGGGTCACCATTTGACTGAGGAGCATATC
AATTTGAATCCGAGATCACGCATGAGAGTTTACTTAGCAGTGCAACTCGA
AAATTGTATTTCATATGTGATCCTCCCCATCTGATGAAAACCACCAGAAA
CAACTTGGAGAAGTCAAGCTCAAAGTCTACTTCTAGAAATCTAATGATGA
GGTGGCACCCTTTGATTATAAGATGGTGTATTGGGATCTACCTTAAAAGT
CCAGGGACATACAAAGGACAATTACAGCAATTTTTGAATCTGCCATCAAA
GAACACCTTACTAAAATACATTAACTATACTGATCCTGGGTGTGGTTTCA
ATCCTGACACTATTGCAAATATTGCCAGACAATTTGACGCCCTTGAAAAA
CCTCATCAAAGTTTTGTTTCCTTGGTTGTTGATGAAATGAAGATCAAGAG
TGGGCTTTGTTTCAGCACCTCTACTGGGAAAATTGTTGGTTTGTGTGAAG
AAGGGTCTATAAATGATCTTCTGTCCGAATTTGAGCTTAAATACAGTGAA
GAGGAGTCTGAAAACCAACGCCCCCTTGACAGTACCGACAGGGAACTTGC
TAGCTATGCCACAGCACTCATGGTCAGAGGAATTTCTTCAAACTTATTTT
ATGTCTTTGGACACTTTGCTTCCAGCTCTGGAATGACAAGCAGTCAGCTG
TACCATGTTATTTGGGAGGGTATCAGTTTATTGGAGTCCATTGATTTGAA
GGTGTTGGCCATAGTTGCCGATGGTGCCTCAACAAACCGAAAGTTTTTCA
AACTCCATAATTGGGAAACGAAAGAAAACTTTAGTCCAGAAAATGTTATC
TATTGGACATGGAATGAATGTTGCCCAATTCGTTCATTCATCGAAGTATC
AAAAGTGATGTTCAACGAAGGTGCCAAATATATTCTATCAGAGAAATTAA
GTCAGGATCCACTTGAGGAATATTTTGGGAAGCAGAGAATGCGACTCGGA
TGTAATGAGAATCCAACGCTTAGTCAGTTTAATTTTAATGCTCTCGCAAT
CGGAGTTGCTGGCGATTTATTGGTTCGACCTGAAGGGAACAGTCGGGGTA
AACATAACGAGCAGAAAATCATCGACGTTAACGATATGTCACTTCCCCCC
AAAAAGAAGACAAAACCTTCTTAATGGTTGGTCACAACATTTTTGAAGTA
CCTTAATGATTGGGAGGCGCACTGCTACAGCATCCCAAATTTGACGAAAA
TTGAACAATCAAAATTATGTCTCAGTCACCAAACACTGGAAGGACTTCGA
ATAACAGGTTCTCAGTGCTACTGTAGTCAACATGTTGGATGAGCAGGATC
TCCATACCACAAAATCTTTGAGGACATTTATTTCCCACATGAACAGATTC
TTCGATTGTTTAAACGTCTCCAAGTCTGATGAAAAATCTAACAACCTAGA
TAAGCACAAGTACAGGGGAGCAGACGACGAACGCTTTGGGTGTGATGGTC
AAAGTTTATCCTGGGGTCAAATAATAAATCTTTATGAATGGGATTTAGGG
ATGGAGAGAGATGCCATTGGTCTGACAATGGGTCACCATTTGACTGAGGA
GCATATCAATTTGAATCCGAGATCACGCATGAGAGTTTACTTAGCAGTGC
AACTCGAAAATTGTATTTCATATGTGATCCTCCCCATCTGATGAAAACCA
CCAGAAACAACTTGGAGAAGTCAAGCTCAAAGTCTACTTCTAGAAATCTA
ATGATGAGGTGGCACCCTTTGATTATAAGATGGTGTATTGGGATCTACCT
TAAAAGTCCAGGGACATACAAAGGACAATTACAGCAATTTTTGAATCTGC
CATCAAAGAACACCTTACTAAAATACATTAACTATACTGATCCTGGGTGT
GGTTTCAATCCTGACACTATTGCAAATATTGCCAGACAATTTGACGCCCT
TGAAAAACCTCATCAAAGTTTTGTTTCCTTGGTTGTTGATGAAATGAAGA
TCAAGAGTGGGCTTTGTTTCAGCACCTCTACTGGGAAAATTGTTGGTTTG
TGTGAAGAAGGGTCTATAAATGATCTTCTGTCCGAATTTGAGCTTAAATA
CAGTGAAGAGGAGTCTGAAAACCAACGCCCCCTTGACAGTACCGACAGGG
AACTTGCTAGCTATGCCACAGCACTCATGGTCAGAGGAATTTCTTCAAAC
TTATTTTATGTCTTTGGACACTTTGCTTCCAGCTCTGGAATGACAAGCAG
TCAGCTGTACCATGTTATTTGGGAGGGTATCAGTTTATTGGAGTCCATTG
ATTTGAAGGTGTTGGCCATAGTTGCCGATGGTGCCTCAACAAACCGAAAG
TTTTTCAAACTCCATAATTGGGAAACGAAAGAAAACTTTAGTCCAGAAAA
TGTTATCTATTGGACATGGAATGAATGTTGCCCAATTCGTTCATTCATCG
AAGTATCAAAAGTGATGTTCAACGAAGGTGCCAAATATATTCTATCAGAG
AAATTAAGTCAGGATCCACTTGAGGAATATTTTGGGAAGCAGAGAATGCG
ACTCGGATGTAATGAGAATCCAACGCTTAGTCAGTTTAATTTTAATGCTC
TCGCAATCGGAGTTGCTGGCGATTTATTGGTTCGACCTGAAGGGAACAGT
CGGGGTAAACATAACGAGCAGAAAATCATCGACGTTAACGATATGTCACT
TCCCCCCAAAAAGAAGACAAAACCTTCTTAATGGTTGGTCACAACATTTT
TGAAGTACCTTAATGATTGGGAGGCGCACTGCTACAGCATCCCAAATTTG
ACGAAAATTGAACAATCAAAATTATGTCTCAGTCACCAAACACTGGAAGG
ACTTCGAATAACAGGTTCTCAGTGCTACTGTAGTCAACATGTTGGATGAG
CAGGATCTCCATACCACAAAATCTTTGAGGACATTTATTTCCCACATGAA
CAGATTCTTCGATTGTTTAAACGTCTCCAAGTCTGATGAAAAATCTAACA
ACCTAGATAAGCACAAGTACAGGGGAGCAGACGACGAACGCTTTGGGTGT
GATGGTCAAAGTTTATCCTGGGGTCAAATAATAAATCTTTATGAATGGGA
TTTAGGGATGGAGAGAGATGCCATTGGTCTGACAATGGGTCACCATTTGA
CTGAGGAGCATATCAATTTGAATCCGAGATCACGCATGAGAGTTTACTTA
GCAGTGCAACTCGAAAATTGTATTTCATATGTGATCCTCCCCATCTGATG
AAAACCACCAGAAACAACTTGGAGAAGTCAAGCTCAAAGTCTACTTCTAG
AAATCTAATGATGAGGTGGCACCCTTTGATTATAAGATGGTGTATTGGGA
TCTACCTTAAAAGTCCAGGGACATACAAAGGACAATTACAGCAATTTTTG
AATCTGCCATCAAAGAACACCTTACTAAAATACATTAACTATACTGATCC
TGGGTGTGGTTTCAATCCTGACACTATTGCAAATATTGCCAGACAATTTG
ACGCCCTTGAAAAACCTCATCAAAGTTTTGTTTCCTTGGTTGTTGATGAA
ATGAAGATCAAGAGTGGGCTTTGTTTCAGCACCTCTACTGGGAAAATTGT
TGGTTTGTGTGAAGAAGGGTCTATAAATGATCTTCTGTCCGAATTTGAGC
TTAAATACAGTGAAGAGGAGTCTGAAAACCAACGCCCCCTTGACAGTACC
GACAGGGAACTTGCTAGCTATGCCACAGCACTCATGGTCAGAGGAATTTC
TTCAAACTTATTTTATGTCTTTGGACACTTTGCTTCCAGCTCTGGAATGA
CAAGCAGTCAGCTGTACCATGTTATTTGGGAGGGTATCAGTTTATTGGAG
TCCATTGATTTGAAGGTGTTGGCCATAGTTGCCGATGGTGCCTCAACAAA
CCGAAAGTTTTTCAAACTCCATAATTGGGAAACGAAAGAAAACTTTAGTC
CAGAAAATGTTATCTATTGGACATGGAATGAATGTTGCCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036861XLOC_036861Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058509-proteinTCONS_00058509-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058509-exon-scaffold_311-1575043694:32883..34049TCONS_00058509-exon-scaffold_311-1575043694:32883..34049Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1575043694:32570..32670TCONS_00058509-exon-scaffold_311-1575043694:32570..32670Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1575043694:32297..32458TCONS_00058509-exon-scaffold_311-1575043694:32297..32458Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1575043694:31683..31865TCONS_00058509-exon-scaffold_311-1575043694:31683..31865Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1575043694:31323..31455TCONS_00058509-exon-scaffold_311-1575043694:31323..31455Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1575043694:30561..31025TCONS_00058509-exon-scaffold_311-1575043694:30561..31025Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:32883..34049TCONS_00058509-exon-scaffold_311-1510915933:32883..34049Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:32570..32670TCONS_00058509-exon-scaffold_311-1510915933:32570..32670Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:32297..32458TCONS_00058509-exon-scaffold_311-1510915933:32297..32458Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:31683..31865TCONS_00058509-exon-scaffold_311-1510915933:31683..31865Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:31323..31455TCONS_00058509-exon-scaffold_311-1510915933:31323..31455Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1510915933:30561..31025TCONS_00058509-exon-scaffold_311-1510915933:30561..31025Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:32883..34049TCONS_00058509-exon-scaffold_311-1491911889:32883..34049Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:32570..32670TCONS_00058509-exon-scaffold_311-1491911889:32570..32670Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:32297..32458TCONS_00058509-exon-scaffold_311-1491911889:32297..32458Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:31683..31865TCONS_00058509-exon-scaffold_311-1491911889:31683..31865Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:31323..31455TCONS_00058509-exon-scaffold_311-1491911889:31323..31455Clytia hemisphaericaexon
TCONS_00058509-exon-scaffold_311-1491911889:30561..31025TCONS_00058509-exon-scaffold_311-1491911889:30561..31025Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:30561..34049 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 4.35609 3.23546 1.76727 2.23948 1.77652 2.81553 1.68719 1.71444 2.21803 1.83363 0.0328102 0 0 0 0 0.0197126 0.0558663 0 0 0 1.36652 1.34447 0.0242992 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058509 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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