TCONS_00058506 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058506
Unique NameTCONS_00058506
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2389

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058506 ID=TCONS_00058506|Name=TCONS_00058506|organism=Clytia hemisphaerica|type=transcript|length=2389bp
TTTTAACTCGTGTATAAAAGGATAAGAATTTgcaaattttatgaattttc
gtTTTCAGAAATAACTCATTATTCCATTTTGATGCAAGATGGTGAATCTT
TTGACCAAACTATCCGCCCCACGCGGCACAATAGTGCACCAAACATCAGA
AAAAGGTCAACGAAAAATCAACATTAACGTTGGTGGCGAGAAACACTCAC
CTTACGTGAGTACTTTACAGAACGTTCCGGATTCTCCTCTATCCTGGATT
ATACGTGATGAATTCCGGAATGACTTAGATTATGATTCAGTCGAAGATGT
TTATTATTTTGACCGACATCCAGGCATCttttccgccattttgaattatt
ttcaaacgGGAAAATTACATTGTCCACGCGATGTTTGTGGACCAATGTTT
CAAGAGGAATTGAATTTTTGGGGAATCGATGAAACACAAATGGAAGCTTG
TTGCTGGCCAAACTACACCACACATCGAGAGAtccaagaaaatttgaaaa
tgcttcaCATTGCAAGAAAGAAACAACACTGTCAACAAGgtTCAGAAGAC
GTAACCAAGCAACATCCACCATTAACAACAGATCCATATCGAATGATCAG
TAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAAAATCTGGGAAGTCT
TAGATGAGCCGTATTCCTCTGGGCTAGCAAAgatgTTTGCATATATCTCC
TTATTTTTCATTGTTCTGTCCATCATCACATATTCTCTCATCACCATCGA
AGATGTCAACTTTAAACAAACACCATGCCCAACTACACAAGAACTGCTCG
TGAACCAACTTGCCAATAATTTGACATCATCAAACACGTCAGtcacCAGT
TGCACCAGTCGTACTCAAGGAGCGAATATTTTACATGGTTTTGAAATCCT
ATTCGCGTTATGGTTCACGTTAGAAATCGTACTACGTCTCACATTTTGCC
CTGACAAACTGGATTATCTGAAAACTCTTTCCAACTGGGTTGACCTATTC
GCTGTCATTCCTGTCTATTTATTACTTCTCTGGACAGATCAATCTCAAGT
GTTAATGATGCTCAATATGATCAGATACCTCCGTATTTTCCGCCTTTTCA
AGCTGTTATACGATCTTCATATTTTGGGAAAAACCTTACAAGCCAGTATC
AACCAGCTTCTCATTTTGTTGATCATCTTAACGGTGCCGACTATCATGTT
TAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGGAAGCGAGAAGAGCA
AACAGGATTTCTCAGAAATACAAAAAGGCATGTGGTGGTCTGTGATCACT
TCAACGACTGTCGGTTATGGTGACATTGTCCCCGAATCCATTATCGGGAA
ATTAGTCGGGGCTGCCGCATCTGTAATCGGTATAATTATCGTCTCAATAA
CGGCGTCAGTCATTGGTTGTAACTTTGAACAATATTATAGCGTCGCTATA
ACACAATTACGAATTCCAGCTAAAAATTCAACCGCTTTTAAGGAGGTCGT
TAAAAGGAATACATTAATTGCGCAATTAAGACCACACGGTAAAGATGTCA
ATTCCAGCATCAAATCTGATGATTCGAAAGATTCCGGATATGGGCGGTCA
CCTGTACCGCCCTCCGATTCCGCCAATGCGTCACCAGAACGCCAACAACA
GCTTACTGAGAAGAATATTGTTGTTGCTATGGATCGTAATGGACAACCGA
ATATAAATGGGACGGCTAAAGTTTGATCAAACTGATTTCTTAGTAGATGA
ACGTCTAGATTTAAAATGAGGTCTTATGATGTGCAAACTCGCTTACCACT
GCCTCCTAAGAAATGAAGTAATTTGGTGATGATAGATTGACTGTAAATTT
AAATGACGATAATTTACAAATCAAAAGGATTATTTGGTCCGGAAGTACTT
GTCTCTCGTTATATTGATTTGAGTTTTATGTCTAAATATTTTGTCTAATA
AATTATATTGTGTCAGTTTCAAATAGGTCAATTTTCCCAGTACAGGCTCT
ATCAGAATAATAGTTTTGGAGAAATTGAAAGCTGATTAGGATCTTTACTA
AAGAACTGCGATATGTTTCAACAAAATTTAAATGAGAACGGAATTAAATA
TATACAATGATTGTGctacaaaaaaattaacataccttatcataaaaaat
gtgtataaaatttgtaaatcataatatttttgatttttcgatttttcgat
ttttcgtggATTTAAAGATattgtttatcaaaaaagaaaaattaagtggT
ACCACCCTTTATAGCACTTTTATCTCAAGGAACATGCATCGAATGGTTTC
CAGAGGAACCCTTGTCCATCGACGGGGCATGTTGTTATGGTTCCCCTACG
TAGGATTCTTAGATCGaatttttggcaaaagattGCGAA
Run BLAST on NCBI

protein sequence of TCONS_00058506-protein

>TCONS_00058506-protein ID=TCONS_00058506-protein|Name=TCONS_00058506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MVNLLTKLSAPRGTIVHQTSEKGQRKININVGGEKHSPYVSTLQNVPDSP
LSWIIRDEFRNDLDYDSVEDVYYFDRHPGIFSAILNYFQTGKLHCPRDVC
GPMFQEELNFWGIDETQMEACCWPNYTTHREIQENLKMLHIARKKQHCQQ
GSEDVTKQHPPLTTDPYRMISSGQAKWHRYQMKIWEVLDEPYSSGLAKMF
AYISLFFIVLSIITYSLITIEDVNFKQTPCPTTQELLVNQLANNLTSSNT
SVTSCTSRTQGANILHGFEILFALWFTLEIVLRLTFCPDKLDYLKTLSNW
VDLFAVIPVYLLLLWTDQSQVLMMLNMIRYLRIFRLFKLLYDLHILGKTL
QASINQLLILLIILTVPTIMFSSFVYYSELFGGSEKSKQDFSEIQKGMWW
SVITSTTVGYGDIVPESIIGKLVGAAASVIGIIIVSITASVIGCNFEQYY
SVAITQLRIPAKNSTAFKEVVKRNTLIAQLRPHGKDVNSSIKSDDSKDSG
YGRSPVPPSDSANASPERQQQLTEKNIVVAMDRNGQPNINGTAKV
Run BLAST on NCBI

transcript from alignment at scaffold_311:1336318..1344045+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058506 ID=TCONS_00058506|Name=TCONS_00058506|organism=Clytia hemisphaerica|type=transcript|length=7728bp|location=Sequence derived from alignment at scaffold_311:1336318..1344045+ (Clytia hemisphaerica)
TTTTAACTCGTGTATAAAAGGATAAGAATTTgcaaattttatgaattttc
gtTTTCAGAAATAACTCATTATTCCATTTTGATGCAAGATGGTGAATCTT
TTGACCAAACTATCCGCCCCACGCGGCACAATAGTGCACCAAACATCAGA
AAAAGGTCAACGAAAAATCAACATTAACGTTGGTGGCGAGAAACACTCAC
CTTACGTGAGTACTTTACAGAACGTTCCGGATTCTCCTCTATCCTGGATT
ATACGTGATGAATTCCGGAATGACTTAGATTATGATTCAGTCGAAGATGT
TTATTATTTTGACCGACATCCAGGCATCttttccgccattttgaattatt
ttcaaacgGGAAAATTACATTGTCCACGCGATGTTTGTGGACCAATGTTT
CAAGAGGAATTGAATTTTTGGGGAATCGATGAAACACAAATGGAAGGTGA
GCAGTTTGTtttaacgtccatctaacgttatattaTGGATGTTATGGGCG
TTAGTTTGACGCTATTCTGGCGTTTGTACCAGCTTGGCGTCATCTTGGGT
GTATGAGAAAACCGTAATTATTTTCTCGGGGTAATCTTGTGGAGATAAAC
AATAAGTAACATACATTCATTTCAAGATTGAAATTATGTTTCATTTTAAG
CATTCGGTCCAATAAGAGTTTTGGTTGGCAGCTATCCGAAAATATACTTT
GATTTGGGCTGAGTTttgtacacccccttctcacagacccggtaggattt
tctCAGCCATTAGGgatgaaaataacggactgaaactctatggggattga
tattcctgtattttttatggctgtggatgtcaattcttttgttttcaatt
cagaATATTCAGTAGGGATGGGAAAAAAAGAgtcatattttgcagtgagg
attggtttctttgattattttcaaaaattggagtataaatttccaccggg
gacgatatttcggacaatttttaaattgaagaaggttcccagtgggtctg
tgagaagggggtgtttttgtATCTTTACCTGCAGTATTCTTAGAACCTTG
GCCACTGATTTTGGGCATTCAAGCCTAAATTATCATGTCTGTTTCATCTt
ccaatttcatcatttttataaCCTTTTCTCACACTTTAGCTTGTTGCTGG
CCAAACTACACCACACATCGAGAGAtccaagaaaatttgaaaatgcttca
CATTGCAAGAAAGAAACAACACTGTCAACAAGGTAGCTTCCAAATAGTCT
CAACAAGTTTCCAAATAAACCTTTAGGTGAACACGacggtctattgaata
acatATTACTCTGACAGCATACaataatagatcttatcggagtttttgat
ttttctaaaaaagcgatgcattgtgggattaatttcgggagtattacaat
agaaatctcttaggaattcctcgagagaattctattgtaattaCATATAT
TACATATAACACCAAAAATCACGGCAGTTATGCCCGAAAAAATTGCCAAT
CACACCATTAGGTGAACCGCTGTGCGGGCTCGTTAAAGGTACTTACTTGC
GTaacgatacacgtttttttgtaagaacaaactatataagaacataaggc
ttcgatagccaaaatgttaagaacatgttaagaacatttaagcctttGGG
GAATCTAAAAGACCCGATTTCTTAggtaaatggacaaaaatacccaTAAA
TTGgttaaaatgttaagaacatgttaagaacatttaagcctttGGGGAAT
CTAAAAGACCCGATTTCTTAggtaaatggacaaaaatacccataaattgg
ttaaaataagaacatgttaagaacattttaaagcttaaaCCTctaaaagc
taagaacatccgaaggcttcaaaacttttggatgttcttataaaaaaaca
tgtatagcgTGTACCATGCATATTCcatttttctttgaaaggtTCAGAAG
ACGTAACCAAGCAACATCCACCATTAACAACAGATCCATATCGAATGATC
AGTAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAAAATCTGGGAAGT
CTTAGATGAGCCGTATTCCTCTGGGCTAGCAAAggtttgaaattgttttt
tatttaaatacaCCATGAGACCGTTTCACTATAAGTTGCCAAAGTTTACA
CGTtcctaaatttttcaattctttggatgttcttaacttttagagtttta
agcctaaaaacgttcttaacatgttcttatgttcttaacttgttcttgtt
cttatgtttttatatagtttgttcttataaaaaacgtgtaccataGCGCA
GTGACGTTAAATGTGTAAGTCCTTGCAGATTGACACCCTTACAGATACAT
CTCATCCTTTTCGGCTCTGGTAGACTCATTTCCAATTCTTTTGCTTTAGG
GGTGAAAggtttcgaaatttattttcgtttcaatatttttagtaAAACTT
TCTTTATGAAATACCCTTTTAAAGGCGCACATTTCTAGCTTGCAGAGACC
TCACTCGTACATTCTTCTTGTTGCAAGATAAAGCGACATAAATCCATAGA
ACAATTTATATTCCCAGCAAGTGGACGCTTCAAATAAAGTAAGCAAGTTA
TTAGAGAGGTTGTATTGAtagtttttatcattttcatttttttagatgTT
TGCATATATCTCCTTATTTTTCATTGTTCTGTCCATCATCACATATTCTC
TCATCACCATCGAAGATGTCAACTTTAAACAAACACCATGCCCAACTACA
CAAGAACTGCTCGTGAACCAACTTGCCAATAATTTGACATCATCAAACAC
GTCAGGTAATGTTTAAATCGCCGAATAATCCGGGGGGCTCTCGCTTTTTC
GTTACTAAGATAACCCTTTTTGATCAAGTGAATAGCGCTGGCGCTTATGG
GGTAGGAACATAgatagatatcttatataaaacactagttatagctactc
tgtatttcccaacaacgacaggtgaagcaaaataatgcgccatctttgct
gaaagtaggtcacaANTTttagagttttaagcctaaaaacgttcttaaca
tgttcttatgttcttaacttgttcttgttcttatgtttttatatagtttg
ttcttatacaaaacgtgtaCCATAGCGCAGTGACGTTAAATGTGTAAGTC
CTTGCAGATTGACACCCTTACAGATACATCTCATCCTTTTCGGCTCTGGT
AGACTCATTTCCAATTCTTTTGCTTTAGGGGTGAAAggtttcgaaattta
ttttcgtttcaatatttttagtaAAACTTTCTTTATGAAATACCCTTTTA
AAGGCGCACATTTCTAGCTTGCAGAGACCTCACTCGTACATTCTTCTTGT
TGCAAGATAAAGCGACATAAATCCATAGAACAATTTATATTCCCAGCAAG
TGGACGCTTCAAATAAAGTAAGCAAGTTATTAGAGAGGTTGTATTGAtag
tttttatcattttcatttttttagatgTTTGCATATATCTCCTTATTTTT
CATTGTTCTGTCCATCATCACATATTCTCTCATCACCATCGAAGATGTCA
ACTTTAAACAAACACCATGCCCAACTACACAAGAACTGCTCGTGAACCAA
CTTGCCAATAATTTGACATCATCAAACACGTCAGGTAATGTTTAAATCGC
CGAATAATCCGGGGGGCTCTCGCTTTTTCGTTACTAAGATAACCCTTTTT
GATCAAGTGAATAGCGCTGGCGCTTGTGGGGTAGGAACATAtatagatat
cttatataaaacactagttatagctactctgtatttcccaacgacgacag
gtgaagcaaaataatgcgccatctttgctgaaagtaggtcacaataggtc
acagttcggtaccggcaattttttcaaccaaGCAAAAAAACTTGACGAGG
TGAAAGATAGGCTtgattgatcaaattgccggcaccgaagatggtggatt
attttgattcaaatagggacggagtagctctatctagtgttttacaTTTA
ATTTTTACGTCAGAGGGCCGAAATGTTGTTAACAGTGTAAACAGGTGAAG
ATTTTGGGGAGGCAAATAAATTACAAAAGTGTATAAGGTTCCGAAATGTG
TATTTGTCGAAATGAGTAAATTATAGTAAACttgaaatgattgaaatttg
CCGAAATCTGTGAAATGAAATAAATGTGAAATATTGTTCGCTTTGGGGCT
GATGTTGGGGATGTACCATGCAATATGAGGTCTAACTTAAGCTCCTAAGA
CCGTAAGGATGACGGCCCGTCGAaggactgtaaggaggacagtCAAATGA
GTTtggactgtaaggaggacagcctTTACTCCTAACATGTATGTGCATGT
AGATACTGTATAAGCTAGCCACTAGGTAGGAGTGTGGGGTTCCGAAGGGA
CCCACACCAATGGAAAGCATATTGCGTGATACATCCCAAAAGAAGACAAA
AAAGACTAGTCCCTGGACTAAAAACACCTTTTGGGGAAAAAACCTGGCTG
GGACTAGCTGCGCTGCTGCTTGTACGTCCTTCGACGTCGGACGTGGGCAT
CGTCGTCATTCATCCTGAAATGATAGAGGGAAAAAAGCAAGCAAAAACTA
GCGCATACGAGTACCACGTCCCTCCCTAACTCCATGTATGGAAGGGAAGG
GAGGGTGGGAAATTGAAAACACAAGAATAAGAAAGACTAAACGTGGTTTC
GCTCCCGTATAAATAGTGATACTGGGACTTAAGCAATGGCTTCTAGAGTG
AGTAGCATGATGGCGGAAGGGTGTATTGCGGGCGTTAATTTGTCTTCCTT
AAAATTAACTTAAGCGAACTAAAGTTAGCTCTAAAAAATATCTGTGGATA
GAAACCATTGTACAGACCAGAGTCTGTAAATTCTTTTTTGCGTTCTAACT
GATATTGTATAGACCAAAGGAGCCCTGCGACCCTGTTTTTGCATCTAAAC
AACGGGCAAGCCGCTATGGGACCGCATCAGTCCTGAAAAATGGTGAAATA
GCCTTTAGCAACGACACGAAAAAACCTTAAATAATGACTCCTTAATCTGC
ATGTAGACTGTAAACACGCTATCATTGAGCCTTTCACTAGAAAGGCTttg
ctctagtttagacggtaCGCTTTCcaccctgcctattctaattgtgaatt
aaagcgGGCAaaaagttggctgtctaaagtcaatgcattgccctttttta
acgtcaatgcaatgtcttttttcaatcttttctaagcaaagattttaaca
ccTTTGCGCCTACTTTTCGCCTACTcaaacaattagaatagacagggcag
aaagtcgaccgtctaaactagagctttgATTCTCACACATACAAGCTCTC
ATCCcatatcttttcaatgttacgTTATAATTTTTCGTCTGAGCCTGTTC
AGAATCACACCACTTCATATGAAAGCTCTTAAGAAGCATACCCGTCTGAC
TAACAACGTCTTTTCAACATTCATCCAACGCTATATTGGCGTCGTGAACA
TACCAGATAAACGTAAAAACAACGTTGTGGTTCAGCTCGGTAACTAAATA
ACCATTGAAACTTGCCAAATAAATTACCtgtggtttttatttttttcagt
cacCAGTTGCACCAGTCGTACTCAAGGAGCGAATATTTTACATGGTTTTG
AAATCCTATTCGCGTTATGGTTCACGTTAGAAATCGTACTACGTCTCACA
TTTTGCCCTGACAAACTGGATTATCTGAAAACTCTTTCCAACTGGGTTGA
CCTATTCGCTGTCATTCCTGTCTATTTATTACTTCTCTGGACAGATCAAT
CTCAAGTGTTAATGATGCTCAATATGATCAGATACCTCCGTATTTTCCGC
CTTTTCAAGCTGTTATACGATCTTCATATTTTGGGAAAAACCTTACAAGC
CAGTATCAACCAGCTTCTCATTTTGTTGATCATCTTAACGGTGCCGACTA
TCATGTTTAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGGAAGCGAG
AAGAGCAAACAGGATTTCTCAGAAATACAAAAAGGTACCTTacaaataca
tttatttttaatgttaaTTGATCTCTTTTGCCAAGGCCTCTTGCCGAAAT
TTCATACTTCAATGTCAACCGATCCCTTCATTTCCAAGGCTCAATCAACG
TCCCTGAGCTTCTGTCTTAATTAAAAATGGTTTTAAACTACAGTATTGAT
TCGGGAGAGACTTAAATGTTATGTGATAGTTTTTCTAAAACGGGTAATTC
gttcctaaaattttgcaccatTCTGTAACTAAGCATCTACATTTGTTTAA
ATAAGAATCAGTAGAATTTTGCTGGGGCTcacctgttcttattttttggc
actttgcgcctcaaattgttcttatcctgttcttattatAGGATGTTCTT
GAGGTATTTTcggcgttatacccaatttttactactttgacccctcaatt
gtttgaaattgagtaatttcgtatttttggaaattttgagcctcattgtt
cttataaaaacagtgtATTCATTTCATAGCAATAGAGGAGATTTTTGACG
TTCGAGGAACAAGGCTGTTAAACCAGACAGTTGGCAATAATAATTCATTT
ATCCATTTCACTTTAGGCATGTGGTGGTCTGTGATCACTTCAACGACTGT
CGGTTATGGTGACATTGTCCCCGAATCCATTATCGGGAAATTAGTCGGGG
CTGCCGCATCTGTAATCGGTATAATTATCGTCTCAATAACGGCGTCAGTC
ATTGGTTGTAACTTTGAACAATATTATAGCGTCGCTATAACACAATTACG
AATTCCAGCTAAAAATTCAACCGCTTTTAAGGAGGTCGTTAAAAGGAATA
CATTAATTGCGCAATTAAGACCACACGGTAAAGATGTCAATTCCAGCATC
AAATCTGATGATTCGAAAGATTCCGGATATGGGCGGTCACCTGTACCGCC
CTCCGATTCCGCCAATGCGTCACCAGAACGCCAACAACAGCTTACTGAGA
AGAATATTGTTGTTGCTATGGATCGTAATGGACAACCGAATATAAATGGG
ACGGCTAAAGTTTGATCAAACTGATTTCTTAGTAGATGAACGTCTAGATT
TAAAATGAGGTCTTATGATGTGCAAACTCGCTTACCACTGCCTCCTAAGA
AATGAAGTAATTTGGTGATGATAGATTGACTGTAAATTTAAATGACGATA
ATTTACAAATCAAAAGGATTATTTGGTCCGGAAGTACTTGTCTCTCGTTA
TATTGATTTGAGTTTTATGTCTAAATATTTTGTCTAATAAATTATATTGT
GTCAGTTTCAAATAGGTCAATTTTCCCAGTACAGGCTCTATCAGAATAAT
AGTTTTGGAGAAATTGAAAGCTGATTAGGATCTTTACTAAAGAACTGCGA
TATGTTTCAACAAAATTTAAATGAGAACGGAATTAAATATATACAATGAT
TGTGctacaaaaaaattaacataccttatcataaaaaatgtgtataaaat
ttgtaaatcataatatttttgatttttcgatttttcgatttttcgtggAT
TTAAAGATattgtttatcaaaaaagaaaaattaagtggTACCACCCTTTA
TAGCACTTTTATCTCAAGGAACATGCATCGAATGGTTTCCAGAGGAACCC
TTGTCCATCGACGGGGCATGTTGTTATGGTTCCCCTACGTAGGATTCTTA
GATCGaatttttggcaaaagattGCGAA

Coding sequence (CDS) from alignment at scaffold_311:1336318..1344045+

>TCONS_00058506 ID=TCONS_00058506|Name=TCONS_00058506|organism=Clytia hemisphaerica|type=CDS|length=9828bp|location=Sequence derived from alignment at scaffold_311:1336318..1344045+ (Clytia hemisphaerica)
ATGGTGAATCTTTTGACCAAACTATCCGCCCCACGCGGCACAATAGTGCA
CCAAACATCAGAAAAAGGTCAACGAAAAATCAACATTAACGTTGGTGGCG
AGAAACACTCACCTTACGTGAGTACTTTACAGAACGTTCCGGATTCTCCT
CTATCCTGGATTATACGTGATGAATTCCGGAATGACTTAGATTATGATTC
AGTCGAAGATGTTTATTATTTTGACCGACATCCAGGCATCttttccgcca
ttttgaattattttcaaacgGGAAAATTACATTGTCCACGCGATGTTTGT
GGACCAATGTTTCAAGAGGAATTGAATTTTTGGGGAATCGATGAAACACA
AATGGAAGCTTGTTGCTGGCCAAACTACACCACACATCGAGAGAtccaag
aaaatttgaaaatgcttcaCATTGCAAGAAAGAAACAACACTGTCAACAA
GgtTCAGAAGACGTAACCAAGCAACATCCACCATTAACAACAGATCCATA
TCGAATGATCAGTAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAAAA
TCTGGGAAGTCTTAGATGAGCCGTATTCCTCTGGGCTAGCAAAgatgTTT
GCATATATCTCCTTATTTTTCATTGTTCTGTCCATCATCACATATTCTCT
CATCACCATCGAAGATGTCAACTTTAAACAAACACCATGCCCAACTACAC
AAGAACTGCTCGTGAACCAACTTGCCAATAATTTGACATCATCAAACACG
TCAGtcacCAGTTGCACCAGTCGTACTCAAGGAGCGAATATTTTACATGG
TTTTGAAATCCTATTCGCGTTATGGTTCACGTTAGAAATCGTACTACGTC
TCACATTTTGCCCTGACAAACTGGATTATCTGAAAACTCTTTCCAACTGG
GTTGACCTATTCGCTGTCATTCCTGTCTATTTATTACTTCTCTGGACAGA
TCAATCTCAAGTGTTAATGATGCTCAATATGATCAGATACCTCCGTATTT
TCCGCCTTTTCAAGCTGTTATACGATCTTCATATTTTGGGAAAAACCTTA
CAAGCCAGTATCAACCAGCTTCTCATTTTGTTGATCATCTTAACGGTGCC
GACTATCATGTTTAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGGAA
GCGAGAAGAGCAAACAGGATTTCTCAGAAATACAAAAAGGCATGTGGTGG
TCTGTGATCACTTCAACGACTGTCGGTTATGGTGACATTGTCCCCGAATC
CATTATCGGGAAATTAGTCGGGGCTGCCGCATCTGTAATCGGTATAATTA
TCGTCTCAATAACGGCGTCAGTCATTGGTTGTAACTTTGAACAATATTAT
AGCGTCGCTATAACACAATTACGAATTCCAGCTAAAAATTCAACCGCTTT
TAAGGAGGTCGTTAAAAGGAATACATTAATTGCGCAATTAAGACCACACG
GTAAAGATGTCAATTCCAGCATCAAATCTGATGATTCGAAAGATTCCGGA
TATGGGCGGTCACCTGTACCGCCCTCCGATTCCGCCAATGCGTCACCAGA
ACGCCAACAACAGCTTACTGAGAAGAATATTGTTGTTGCTATGGATCGTA
ATGGACAACCGAATATAAATGGGACGGCTAAAGTTTGAATGGTGAATCTT
TTGACCAAACTATCCGCCCCACGCGGCACAATAGTGCACCAAACATCAGA
AAAAGGTCAACGAAAAATCAACATTAACGTTGGTGGCGAGAAACACTCAC
CTTACGTGAGTACTTTACAGAACGTTCCGGATTCTCCTCTATCCTGGATT
ATACGTGATGAATTCCGGAATGACTTAGATTATGATTCAGTCGAAGATGT
TTATTATTTTGACCGACATCCAGGCATCttttccgccattttgaattatt
ttcaaacgGGAAAATTACATTGTCCACGCGATGTTTGTGGACCAATGTTT
CAAGAGGAATTGAATTTTTGGGGAATCGATGAAACACAAATGGAAGCTTG
TTGCTGGCCAAACTACACCACACATCGAGAGAtccaagaaaatttgaaaa
tgcttcaCATTGCAAGAAAGAAACAACACTGTCAACAAGgtTCAGAAGAC
GTAACCAAGCAACATCCACCATTAACAACAGATCCATATCGAATGATCAG
TAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAAAATCTGGGAAGTCT
TAGATGAGCCGTATTCCTCTGGGCTAGCAAAgatgTTTGCATATATCTCC
TTATTTTTCATTGTTCTGTCCATCATCACATATTCTCTCATCACCATCGA
AGATGTCAACTTTAAACAAACACCATGCCCAACTACACAAGAACTGCTCG
TGAACCAACTTGCCAATAATTTGACATCATCAAACACGTCAGtcacCAGT
TGCACCAGTCGTACTCAAGGAGCGAATATTTTACATGGTTTTGAAATCCT
ATTCGCGTTATGGTTCACGTTAGAAATCGTACTACGTCTCACATTTTGCC
CTGACAAACTGGATTATCTGAAAACTCTTTCCAACTGGGTTGACCTATTC
GCTGTCATTCCTGTCTATTTATTACTTCTCTGGACAGATCAATCTCAAGT
GTTAATGATGCTCAATATGATCAGATACCTCCGTATTTTCCGCCTTTTCA
AGCTGTTATACGATCTTCATATTTTGGGAAAAACCTTACAAGCCAGTATC
AACCAGCTTCTCATTTTGTTGATCATCTTAACGGTGCCGACTATCATGTT
TAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGGAAGCGAGAAGAGCA
AACAGGATTTCTCAGAAATACAAAAAGGCATGTGGTGGTCTGTGATCACT
TCAACGACTGTCGGTTATGGTGACATTGTCCCCGAATCCATTATCGGGAA
ATTAGTCGGGGCTGCCGCATCTGTAATCGGTATAATTATCGTCTCAATAA
CGGCGTCAGTCATTGGTTGTAACTTTGAACAATATTATAGCGTCGCTATA
ACACAATTACGAATTCCAGCTAAAAATTCAACCGCTTTTAAGGAGGTCGT
TAAAAGGAATACATTAATTGCGCAATTAAGACCACACGGTAAAGATGTCA
ATTCCAGCATCAAATCTGATGATTCGAAAGATTCCGGATATGGGCGGTCA
CCTGTACCGCCCTCCGATTCCGCCAATGCGTCACCAGAACGCCAACAACA
GCTTACTGAGAAGAATATTGTTGTTGCTATGGATCGTAATGGACAACCGA
ATATAAATGGGACGGCTAAAGTTTGAATGGTGAATCTTTTGACCAAACTA
TCCGCCCCACGCGGCACAATAGTGCACCAAACATCAGAAAAAGGTCAACG
AAAAATCAACATTAACGTTGGTGGCGAGAAACACTCACCTTACGTGAGTA
CTTTACAGAACGTTCCGGATTCTCCTCTATCCTGGATTATACGTGATGAA
TTCCGGAATGACTTAGATTATGATTCAGTCGAAGATGTTTATTATTTTGA
CCGACATCCAGGCATCttttccgccattttgaattattttcaaacgGGAA
AATTACATTGTCCACGCGATGTTTGTGGACCAATGTTTCAAGAGGAATTG
AATTTTTGGGGAATCGATGAAACACAAATGGAAGCTTGTTGCTGGCCAAA
CTACACCACACATCGAGAGAtccaagaaaatttgaaaatgcttcaCATTG
CAAGAAAGAAACAACACTGTCAACAAGgtTCAGAAGACGTAACCAAGCAA
CATCCACCATTAACAACAGATCCATATCGAATGATCAGTAGTGGTCAAGC
TAAATGGCATCGTTATCAAATGAAAATCTGGGAAGTCTTAGATGAGCCGT
ATTCCTCTGGGCTAGCAAAgatgTTTGCATATATCTCCTTATTTTTCATT
GTTCTGTCCATCATCACATATTCTCTCATCACCATCGAAGATGTCAACTT
TAAACAAACACCATGCCCAACTACACAAGAACTGCTCGTGAACCAACTTG
CCAATAATTTGACATCATCAAACACGTCAGtcacCAGTTGCACCAGTCGT
ACTCAAGGAGCGAATATTTTACATGGTTTTGAAATCCTATTCGCGTTATG
GTTCACGTTAGAAATCGTACTACGTCTCACATTTTGCCCTGACAAACTGG
ATTATCTGAAAACTCTTTCCAACTGGGTTGACCTATTCGCTGTCATTCCT
GTCTATTTATTACTTCTCTGGACAGATCAATCTCAAGTGTTAATGATGCT
CAATATGATCAGATACCTCCGTATTTTCCGCCTTTTCAAGCTGTTATACG
ATCTTCATATTTTGGGAAAAACCTTACAAGCCAGTATCAACCAGCTTCTC
ATTTTGTTGATCATCTTAACGGTGCCGACTATCATGTTTAGCAGTTTTGT
ATATTACTCGGAACTTTTCGGTGGAAGCGAGAAGAGCAAACAGGATTTCT
CAGAAATACAAAAAGGCATGTGGTGGTCTGTGATCACTTCAACGACTGTC
GGTTATGGTGACATTGTCCCCGAATCCATTATCGGGAAATTAGTCGGGGC
TGCCGCATCTGTAATCGGTATAATTATCGTCTCAATAACGGCGTCAGTCA
TTGGTTGTAACTTTGAACAATATTATAGCGTCGCTATAACACAATTACGA
ATTCCAGCTAAAAATTCAACCGCTTTTAAGGAGGTCGTTAAAAGGAATAC
ATTAATTGCGCAATTAAGACCACACGGTAAAGATGTCAATTCCAGCATCA
AATCTGATGATTCGAAAGATTCCGGATATGGGCGGTCACCTGTACCGCCC
TCCGATTCCGCCAATGCGTCACCAGAACGCCAACAACAGCTTACTGAGAA
GAATATTGTTGTTGCTATGGATCGTAATGGACAACCGAATATAAATGGGA
CGGCTAAAGTTTGAATGGTGAATCTTTTGACCAAACTATCCGCCCCACGC
GGCACAATAGTGCACCAAACATCAGAAAAAGGTCAACGAAAAATCAACAT
TAACGTTGGTGGCGAGAAACACTCACCTTACGTGAGTACTTTACAGAACG
TTCCGGATTCTCCTCTATCCTGGATTATACGTGATGAATTCCGGAATGAC
TTAGATTATGATTCAGTCGAAGATGTTTATTATTTTGACCGACATCCAGG
CATCttttccgccattttgaattattttcaaacgGGAAAATTACATTGTC
CACGCGATGTTTGTGGACCAATGTTTCAAGAGGAATTGAATTTTTGGGGA
ATCGATGAAACACAAATGGAAGCTTGTTGCTGGCCAAACTACACCACACA
TCGAGAGAtccaagaaaatttgaaaatgcttcaCATTGCAAGAAAGAAAC
AACACTGTCAACAAGgtTCAGAAGACGTAACCAAGCAACATCCACCATTA
ACAACAGATCCATATCGAATGATCAGTAGTGGTCAAGCTAAATGGCATCG
TTATCAAATGAAAATCTGGGAAGTCTTAGATGAGCCGTATTCCTCTGGGC
TAGCAAAgatgTTTGCATATATCTCCTTATTTTTCATTGTTCTGTCCATC
ATCACATATTCTCTCATCACCATCGAAGATGTCAACTTTAAACAAACACC
ATGCCCAACTACACAAGAACTGCTCGTGAACCAACTTGCCAATAATTTGA
CATCATCAAACACGTCAGtcacCAGTTGCACCAGTCGTACTCAAGGAGCG
AATATTTTACATGGTTTTGAAATCCTATTCGCGTTATGGTTCACGTTAGA
AATCGTACTACGTCTCACATTTTGCCCTGACAAACTGGATTATCTGAAAA
CTCTTTCCAACTGGGTTGACCTATTCGCTGTCATTCCTGTCTATTTATTA
CTTCTCTGGACAGATCAATCTCAAGTGTTAATGATGCTCAATATGATCAG
ATACCTCCGTATTTTCCGCCTTTTCAAGCTGTTATACGATCTTCATATTT
TGGGAAAAACCTTACAAGCCAGTATCAACCAGCTTCTCATTTTGTTGATC
ATCTTAACGGTGCCGACTATCATGTTTAGCAGTTTTGTATATTACTCGGA
ACTTTTCGGTGGAAGCGAGAAGAGCAAACAGGATTTCTCAGAAATACAAA
AAGGCATGTGGTGGTCTGTGATCACTTCAACGACTGTCGGTTATGGTGAC
ATTGTCCCCGAATCCATTATCGGGAAATTAGTCGGGGCTGCCGCATCTGT
AATCGGTATAATTATCGTCTCAATAACGGCGTCAGTCATTGGTTGTAACT
TTGAACAATATTATAGCGTCGCTATAACACAATTACGAATTCCAGCTAAA
AATTCAACCGCTTTTAAGGAGGTCGTTAAAAGGAATACATTAATTGCGCA
ATTAAGACCACACGGTAAAGATGTCAATTCCAGCATCAAATCTGATGATT
CGAAAGATTCCGGATATGGGCGGTCACCTGTACCGCCCTCCGATTCCGCC
AATGCGTCACCAGAACGCCAACAACAGCTTACTGAGAAGAATATTGTTGT
TGCTATGGATCGTAATGGACAACCGAATATAAATGGGACGGCTAAAGTTT
GAATGGTGAATCTTTTGACCAAACTATCCGCCCCACGCGGCACAATAGTG
CACCAAACATCAGAAAAAGGTCAACGAAAAATCAACATTAACGTTGGTGG
CGAGAAACACTCACCTTACGTGAGTACTTTACAGAACGTTCCGGATTCTC
CTCTATCCTGGATTATACGTGATGAATTCCGGAATGACTTAGATTATGAT
TCAGTCGAAGATGTTTATTATTTTGACCGACATCCAGGCATCttttccgc
cattttgaattattttcaaacgGGAAAATTACATTGTCCACGCGATGTTT
GTGGACCAATGTTTCAAGAGGAATTGAATTTTTGGGGAATCGATGAAACA
CAAATGGAAGCTTGTTGCTGGCCAAACTACACCACACATCGAGAGAtcca
agaaaatttgaaaatgcttcaCATTGCAAGAAAGAAACAACACTGTCAAC
AAGgtTCAGAAGACGTAACCAAGCAACATCCACCATTAACAACAGATCCA
TATCGAATGATCAGTAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAA
AATCTGGGAAGTCTTAGATGAGCCGTATTCCTCTGGGCTAGCAAAgatgT
TTGCATATATCTCCTTATTTTTCATTGTTCTGTCCATCATCACATATTCT
CTCATCACCATCGAAGATGTCAACTTTAAACAAACACCATGCCCAACTAC
ACAAGAACTGCTCGTGAACCAACTTGCCAATAATTTGACATCATCAAACA
CGTCAGtcacCAGTTGCACCAGTCGTACTCAAGGAGCGAATATTTTACAT
GGTTTTGAAATCCTATTCGCGTTATGGTTCACGTTAGAAATCGTACTACG
TCTCACATTTTGCCCTGACAAACTGGATTATCTGAAAACTCTTTCCAACT
GGGTTGACCTATTCGCTGTCATTCCTGTCTATTTATTACTTCTCTGGACA
GATCAATCTCAAGTGTTAATGATGCTCAATATGATCAGATACCTCCGTAT
TTTCCGCCTTTTCAAGCTGTTATACGATCTTCATATTTTGGGAAAAACCT
TACAAGCCAGTATCAACCAGCTTCTCATTTTGTTGATCATCTTAACGGTG
CCGACTATCATGTTTAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGG
AAGCGAGAAGAGCAAACAGGATTTCTCAGAAATACAAAAAGGCATGTGGT
GGTCTGTGATCACTTCAACGACTGTCGGTTATGGTGACATTGTCCCCGAA
TCCATTATCGGGAAATTAGTCGGGGCTGCCGCATCTGTAATCGGTATAAT
TATCGTCTCAATAACGGCGTCAGTCATTGGTTGTAACTTTGAACAATATT
ATAGCGTCGCTATAACACAATTACGAATTCCAGCTAAAAATTCAACCGCT
TTTAAGGAGGTCGTTAAAAGGAATACATTAATTGCGCAATTAAGACCACA
CGGTAAAGATGTCAATTCCAGCATCAAATCTGATGATTCGAAAGATTCCG
GATATGGGCGGTCACCTGTACCGCCCTCCGATTCCGCCAATGCGTCACCA
GAACGCCAACAACAGCTTACTGAGAAGAATATTGTTGTTGCTATGGATCG
TAATGGACAACCGAATATAAATGGGACGGCTAAAGTTTGAATGGTGAATC
TTTTGACCAAACTATCCGCCCCACGCGGCACAATAGTGCACCAAACATCA
GAAAAAGGTCAACGAAAAATCAACATTAACGTTGGTGGCGAGAAACACTC
ACCTTACGTGAGTACTTTACAGAACGTTCCGGATTCTCCTCTATCCTGGA
TTATACGTGATGAATTCCGGAATGACTTAGATTATGATTCAGTCGAAGAT
GTTTATTATTTTGACCGACATCCAGGCATCttttccgccattttgaatta
ttttcaaacgGGAAAATTACATTGTCCACGCGATGTTTGTGGACCAATGT
TTCAAGAGGAATTGAATTTTTGGGGAATCGATGAAACACAAATGGAAGCT
TGTTGCTGGCCAAACTACACCACACATCGAGAGAtccaagaaaatttgaa
aatgcttcaCATTGCAAGAAAGAAACAACACTGTCAACAAGgtTCAGAAG
ACGTAACCAAGCAACATCCACCATTAACAACAGATCCATATCGAATGATC
AGTAGTGGTCAAGCTAAATGGCATCGTTATCAAATGAAAATCTGGGAAGT
CTTAGATGAGCCGTATTCCTCTGGGCTAGCAAAgatgTTTGCATATATCT
CCTTATTTTTCATTGTTCTGTCCATCATCACATATTCTCTCATCACCATC
GAAGATGTCAACTTTAAACAAACACCATGCCCAACTACACAAGAACTGCT
CGTGAACCAACTTGCCAATAATTTGACATCATCAAACACGTCAGtcacCA
GTTGCACCAGTCGTACTCAAGGAGCGAATATTTTACATGGTTTTGAAATC
CTATTCGCGTTATGGTTCACGTTAGAAATCGTACTACGTCTCACATTTTG
CCCTGACAAACTGGATTATCTGAAAACTCTTTCCAACTGGGTTGACCTAT
TCGCTGTCATTCCTGTCTATTTATTACTTCTCTGGACAGATCAATCTCAA
GTGTTAATGATGCTCAATATGATCAGATACCTCCGTATTTTCCGCCTTTT
CAAGCTGTTATACGATCTTCATATTTTGGGAAAAACCTTACAAGCCAGTA
TCAACCAGCTTCTCATTTTGTTGATCATCTTAACGGTGCCGACTATCATG
TTTAGCAGTTTTGTATATTACTCGGAACTTTTCGGTGGAAGCGAGAAGAG
CAAACAGGATTTCTCAGAAATACAAAAAGGCATGTGGTGGTCTGTGATCA
CTTCAACGACTGTCGGTTATGGTGACATTGTCCCCGAATCCATTATCGGG
AAATTAGTCGGGGCTGCCGCATCTGTAATCGGTATAATTATCGTCTCAAT
AACGGCGTCAGTCATTGGTTGTAACTTTGAACAATATTATAGCGTCGCTA
TAACACAATTACGAATTCCAGCTAAAAATTCAACCGCTTTTAAGGAGGTC
GTTAAAAGGAATACATTAATTGCGCAATTAAGACCACACGGTAAAGATGT
CAATTCCAGCATCAAATCTGATGATTCGAAAGATTCCGGATATGGGCGGT
CACCTGTACCGCCCTCCGATTCCGCCAATGCGTCACCAGAACGCCAACAA
CAGCTTACTGAGAAGAATATTGTTGTTGCTATGGATCGTAATGGACAACC
GAATATAAATGGGACGGCTAAAGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036859XLOC_036859Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058506-proteinTCONS_00058506-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058506-exon-scaffold_311-1491911889:1336318..1336763TCONS_00058506-exon-scaffold_311-1491911889:1336318..1336763Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1336318..1336763TCONS_00058506-exon-scaffold_311-1510915933:1336318..1336763Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1336318..1336763TCONS_00058506-exon-scaffold_311-1575043694:1336318..1336763Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1491911889:1337457..1337549TCONS_00058506-exon-scaffold_311-1491911889:1337457..1337549Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1337457..1337549TCONS_00058506-exon-scaffold_311-1510915933:1337457..1337549Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1337457..1337549TCONS_00058506-exon-scaffold_311-1575043694:1337457..1337549Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1491911889:1338259..1338401TCONS_00058506-exon-scaffold_311-1491911889:1338259..1338401Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1338259..1338401TCONS_00058506-exon-scaffold_311-1510915933:1338259..1338401Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1338259..1338401TCONS_00058506-exon-scaffold_311-1575043694:1338259..1338401Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1491911889:1339792..1339951TCONS_00058506-exon-scaffold_311-1491911889:1339792..1339951Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1339792..1339951TCONS_00058506-exon-scaffold_311-1510915933:1339792..1339951Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1339792..1339951TCONS_00058506-exon-scaffold_311-1575043694:1339792..1339951Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1491911889:1341917..1342351TCONS_00058506-exon-scaffold_311-1491911889:1341917..1342351Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1341917..1342351TCONS_00058506-exon-scaffold_311-1510915933:1341917..1342351Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1341917..1342351TCONS_00058506-exon-scaffold_311-1575043694:1341917..1342351Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1491911889:1342934..1344045TCONS_00058506-exon-scaffold_311-1491911889:1342934..1344045Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1510915933:1342934..1344045TCONS_00058506-exon-scaffold_311-1510915933:1342934..1344045Clytia hemisphaericaexon
TCONS_00058506-exon-scaffold_311-1575043694:1342934..1344045TCONS_00058506-exon-scaffold_311-1575043694:1342934..1344045Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1336318..1344045 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.342686	0.408014	0.25474	0.271357	0.0119485	0.0101019	7.87262	8.07853	6.63896	5.30331	3.71852	5.04968	2.20114	1.95996	0.882709	0.934008	1.54433	1.96372	5.74662	5.21902	4.12378	4.46739	1.7282	2.95409	3.36948	3.88292	2.77101	2.84858	0.259885	0.0956104
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003974K_chnl_volt-dep_Kv3
IPR028325VG_K_chnl
IPR000210BTB/POZ_dom
IPR003131T1-type_BTB
IPR005821Ion_trans_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0051260protein homooligomerization
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0051260 protein homooligomerization
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005249 voltage-gated potassium channel activity
Blast
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BLAST of TCONS_00058506 vs. Swiss-Prot (Human)
Match: KCNC1 (Potassium voltage-gated channel subfamily C member 1 OS=Homo sapiens GN=KCNC1 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 7.895e-84
Identity = 165/452 (36.50%), Postives = 249/452 (55.09%), Query Frame = 2 
Query:  164 KININVGGEKHSPYVSTLQNVPDSPLSWIIRDEFRNDLDYDSVEDVYYFDRHPGIFSAILNYFQTGKLHCPRDVCGPMFQEELNFWGIDETQMEACCWPNYTTHREIQENLKMLHIA----RKKQHCQQGSEDVTKQHPPLTTDPYRMISSG-----QAKWHRYQMKIWEVLDEPYSSGLAKMFAYISLFFIVLSIITYSLITIEDVNFKQTPCPTTQELLVNQLANNLXXXXXXXXXXXXXXQGANILHGFEILFALWFTLEIVLRLTFCPDKLDYLKTLSNWVDLFAVIPVYLLLLWTDQSQ-----VLMMLNMIRYLRIFRLFKL---LYDLHILGKTLQASINQXXXXXXXXTVPTIMFSSFVYYSELFGG-----SEKSKQDFSEIQKGMWWSVITSTTVGYGDIVPESIIGKLXXXXXXXXXXXXXXXXXXXXXCNFEQYYSVAIT 1453
            +I INVGG +H  Y STL+ +P + L+W+   +  +  DYD   D ++FDRHPG+F+ ILNY++TGKLHCP DVCGP+++EEL FWGIDET +E CCW  Y  HR+ +E L     A            G  D       L       +S          W R+Q +IW + ++PYSS  A+  A+ SLFFI++SI T+ L T E  N      P   +  +  + N       +        +    L   E +  +WFT E ++R+ FCP+K++++K   N +D  A++P YL +  +  S      VL  L ++R++RI R+FKL      L +LG TL+AS N+ L+L+I L +  ++F++ +YY+E  G      S      F  I  G WW+V+T TT+GYGD+ P++  G LVGA  ++ G++ +++   VI  NF  YYS+A+ 
Sbjct:    9 RIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFN------PIVNKTEIENVRNG------TQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 448
The following BLAST results are available for this feature:
BLAST of TCONS_00058506 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNC17.895e-8436.50Potassium voltage-gated channel subfamily C member... [more]
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