TCONS_00058433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058433
Unique NameTCONS_00058433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1828

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058433 ID=TCONS_00058433|Name=TCONS_00058433|organism=Clytia hemisphaerica|type=transcript|length=1828bp
TTTTGGGTGTTGTAATCTATTCAGTCGAGAGTAGAGACAACAGAACGCGC
ATCGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGATGCTTCAGGAT
GTTTCCACCGGGTTCTTTGGATTCATCAGACATGGGAATTCATCAAAGTT
CCAATATTAGATGTCAAGAAATTTGTCGTGATAAAGGATATGTGCTCGCC
GCTACTAAAGGTCAGATGTGTCATTGTTCGAATATTTATCCACGAGGAAA
AAAAGTAGTCGATCAAGAATGTTCTACAAGATGTCGTTCATATACACCAT
GTCATGATGTCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGC
GTGGTAGGAGATATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAA
TAAATGGCAAACGAATGTGGGATATCATAATTCAATGTTGAGACATGTTG
GATTACTTTACGATGCTGATTGGAGATCTTCTATTGAGAATGGAGGCTGG
TCGAAATGCAATAAGGAACATTACATCAATGGGCTATCAAGAGAAAACCA
ATACAGTGGATCGTCGTCTGATCCTCTTGGAAGAATCGATTATGCAAGTT
GCCAAAAGGAGCCTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCTA
TTCACCAGTGGAAGGGTTTGGAAGTATTGTAAACAAGGATACTTTATGTC
TGGTGTCTTCACTCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAAT
TCCATTGTTGCCGACCCaagaaacaaaaagaacaaTGGGGACATTGTTAT
AATCACGATGTATCTTCATCCTTAGATAATAAAGGTTGGTCTACATGTCG
ATCCGGATATTTCATGGCTGGAATGGAGCGAGGTGATTGTGATGGTTTAC
ACTGcgtcaatcaaatcaaatgttGTCAAATGGAAAACCTGGCTGTCAGT
GAAAACCCAAAATTGTCCATCAAGCTCAAGGACACCACAAACAAAGGACA
ATTGAAAGAATGCACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAAA
CCTACGAATGCAAATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGAA
TCTGTATCTTTCAAGATGGAAGACGAATCAGATCCTTTGACTTCGAAACC
CGAACGTGTCAAAAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCAA
ACTACGAGTGCAAGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTACT
TTGACTATCGGCTCTGGCTTCTCCATGACCACGACATTTGGTGTGAAAAC
AGCTTTCGAAGCGAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCAT
TTGAATTATCAGCATCTTCTTCTCTCAATATTGGTACAAGTAAAACAACA
ACCAAAACGGTAACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTAA
CCAGCAAGTTATGATTGATCTCCTTCGACAGAAAATCGACATCGTTTACA
AATGGAGTGGCGTTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCAG
ACAGCCAAGAAAGAAGAAACGAAACAAGATATCACAACAGTATTGAGTGG
TCCTGATCGTGAGATGTATGCTTTCGGTAAATGGAAATATCCAAATACTG
ACGTGTTACAAGTCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATGT
GAACATGCAACAGGTGTTGATAAAAACTGTCTCATTGATTGATTCAAATG
TTTTTTAGGGTGTTtgttattataagcatttttttgtgtatttttcaaGT
ACTATCTTTTGTTTAAGACAATAAAAAG
Run BLAST on NCBI

protein sequence of TCONS_00058433-protein

>TCONS_00058433-protein ID=TCONS_00058433-protein|Name=TCONS_00058433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=579bp
LGVVIYSVESRDNRTRIAKRSASVYSVEGCFRMFPPGSLDSSDMGIHQSS
NIRCQEICRDKGYVLAATKGQMCHCSNIYPRGKKVVDQECSTRCRSYTPC
HDVQSCCGGPNAYSVSVVGDIDVAKQTLRRLANKWQTNVGYHNSMLRHVG
LLYDADWRSSIENGGWSKCNKEHYINGLSRENQYSGSSSDPLGRIDYASC
QKEPGDQVCNYQFAFLFTSGRVWKYCKQGYFMSGVFTQPGAQKISDLAQF
HCCRPKKQKEQWGHCYNHDVSSSLDNKGWSTCRSGYFMAGMERGDCDGLH
CVNQIKCCQMENLAVSENPKLSIKLKDTTNKGQLKECTMEARDLTPESKT
YECKSLSNLKDVASLESVSFKMEDESDPLTSKPERVKNYIPVICMPASSN
YECKKVLAVSVAQSSTLTIGSGFSMTTTFGVKTAFEANWFGQKFKNEISF
ELSASSSLNIGTSKTTTKTVTDTTWVTVKVPANQQVMIDLLRQKIDIVYK
WSGVFRLLGKYKMNWQTAKKEETKQDITTVLSGPDREMYAFGKWKYPNTD
VLQVVVTDKYGEKKGCEHATGVDKNCLID
Run BLAST on NCBI

transcript from alignment at scaffold_311:237188..242216+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058433 ID=TCONS_00058433|Name=TCONS_00058433|organism=Clytia hemisphaerica|type=transcript|length=5029bp|location=Sequence derived from alignment at scaffold_311:237188..242216+ (Clytia hemisphaerica)
TTTTGGGTGTTGTAATCTATTCAGTCGAGAGTAGAGACAACAGAACGCGC ATCGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGATGCTTCAGGTA AGGTGATTCTGCCGAGTCATATTATCTCATTACACTATTTCATCAATATT CTTGCTTTATCTCTGAAGTATTACTTTTATAATTAATGAGGCCCCCGGGg gagggtacttaggcaagtgaagggtGTGGGTATGTGTCACCCTTAAGGGT GCCTCTTTTTGGACCTGAaagtccctgtaagggttgaaaaaaaaacagaa cattAAATTtcagggtcggaaaaataggaaagtttcaactttttgctcct tgaaagatcaaaatttggtcaaattagtcccaataagggtcgtgaAAATC GCAAAACTTTTCCcatttttctcacttttagtCCCGCTTAGGGTCAAAGG TCAAAGGTCGGGTGGGACATACCCGTCAGtttgcaaccctagtaccccct cccccgggctgAGGCCTTAAGTTAAACCCTTCATCACGGCATCATGTCAA ATGTTTGCTCTCAtcacgaaaatgaaaaactagCCTGAATCAATAGCTTA AATTTTTTCCTTCTCGTGCATCACACCAATTTTGAGCACAAGTAAAGAGC AGGAAAAAGAGCCCCAATTACGCCTTCGCTCAAAAACAAATGGTGGCATC ATCACTTTTTTTAGACTGGCACGGTACCAGcaggaaaagtgagcgtagtg GAGTTAAGCAAGCgtaagaagaaattttgtcgacGGCAAGGGACCCGGCA AGGGCttttaatcagcagcctctcaccagctttttctccttctcctatgc agctcctattctagcaaacgcccgccgcttTTATGATACCGCCCTCTGAT ATGATTAATTAACAggctagtttgctagtctacactttttttgaccatat cGATATTTCAATATAAAGATTTAAAgaacaaaaatctatttttggaTTGA ATCCAATTTTTATGGGATGGCgcaatataatatatatatgtGATTTATTT GGTAACCAATTTACAGCCCAACCGAGTGGTCAAAGGCATGAGCGTTGTTA ACCTATACTAGACGCCACCCGcgtttttttctacgcaattaacaaCATAA CATTTCGCGTTATTTGGTTCTTAGTGAGGTATACTCGCTAGAGAGTTGTA AGCACTACAAAAAATGAGCTGACAGGTCAAATCCCCGCTCCTTCTAGTGT TTCGTTTGGTTCATAGAAAACCGACCCGGCTCTGAACCTTGTGAAAACTT GAAAGACTCGCTTAAAGCCCTAGATTACTTGGCTATTTACGTAAGATATC GATTCTATAAATACATCTATCTATctatgtatttttgaaaaatatttgtc agTTAATAAAAAACTAAATTGCTCTAGATAGCCTGTTTTGGTATATAATT ACCTTTGGGGTTTTAAGAGGGACAATGACCAACATCAGGtaattagcccc cccccccccaatttatTACTTTATGTTTactaatacatgtttttttcttt aagcataacatttataagcatatgcaggcaaTAGAATGCTAGGCATAATG tgagacacttgcttataaaaaaaacgatcTTAGATTACCTCTTGTGAAAA TAAGTTTCCTTCTCCACTGATGGGATACTGATAAAGTATAATTCGTGATA TAAAGATCAAACTCATTTTCTTTGCCAGGATGTTTCCACCGGGTTCTTTG GATTCATCAGACATGGGAATTCATCAAAGTTCCAATATTAGATGTCAAGA AATTTGTCGTGATAAAGGATATGTGCTCGCCGCTACTAAAGGTAAAACGT TGATTATTTAAGTCTTATATCACACTTAAACTTCATGGTCTCAGGGGGAT ATCCAGAAAGGTATTCTagcatgaaacaaaaaaatgattatCATATAATT CACATTGACCCTTTTAGAACCCTTTTTTGAGACTTAGTGATTTTGACAAT CTGCCAGGGATTTTCAGATAAGTTGGTATTTCCATTAACCCAATTTTACA GAAGTGCTCCCCAAGACCCTACAGAGGTACAGTAATCGATGAAATTGTAC ATGTATACAGTACTTGTATGATAACATACGTCTTACGAACTTTGAATTAC TTACAGGTCAGATGTGTCATTGTTCGAATATTTATCCACGAGGAAAAAAA GTAGTCGATCAAGAATGTTCTACAAGATGTCGTTCATATACACCATGTCA TGATGTCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGCGTGG TAGGAGATATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAATAAA TGGCAAACGAATGTGGGATATCATAATTCAATGTTGAGACATGTTGGATT ACTTTACGATGCTGATTGGAGATCTTCTATTGAGAATGGAGGTTTGAGTT TTATTAAAAGCATTCTTTTCCAGCTggaacacaacgttgtttcaacgttt atctaacattcacaacgtccatataacgttaaatgaacgttgaaacaacg ttgtgtgccagctgggattatTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNcccccccccccccggatataAGGGGACCATTGGACCattcatttc tttcctttttctacAATGTATATTGGGTTTCGTTATGGTTAGTCActagt ttgtatttttttcagagTGTATATAACTTCACTATATATCTTTTAGGCTG GTCGAAATGCAATAAGGAACATTACATCAATGGGCTATCAAGAGAAAACC AATACAGTGGATCGTCGTCTGATCCTCTTGGAAGAATCGATTATGCAAGT TGCCAAAAGGAGCCTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCT ATTCACCAGTGGAAGGGTTTGGAAGTATTGTAAACAAGGATACTTTATGT CTGGTGTCTTCACTCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAA TTCCATTGTTGCCGACCCaagaaacaaaaagaacaaTGGGGACATTGTTA TAATCACGATGTATCTTCATCCTTAGATAATAAAGGTTGGTCTACATGTC GATCCGGATATTTCATGGCTGGAATGGAGCGAGGTGATTGTGATGGTTTA CACTGcgtcaatcaaatcaaatgttGTCAAATGGAAAACCTGGCTGTCAG TGAAAACCCAAAATTGTCCATCAAGCTCAAGGACACCACAAACAAAGGAC AATTGAAAGAATGCACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAA ACCTACGAATGCAAATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGA ATCTGTATCTTTCAAGATGGAAGACGAATCAGATCCTTTGACTTCGAAAC CCGAACGTGTCAAAAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCA AACTACGAGTGCAAGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTAC TTTGACTATCGGCTCTGGCTTCTCCATGACCACGACATTTGGTGTGAAAA CAGCTTTCGAAGCGAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCA TTTGAATTATCAGCATCTTCTTCTCTCAATATTGGTACAAGTAAAACAAC AACCAAAACGGTAACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTA ACCAGCAAGTTATGATTGATCTCCTTCGACAGAAAATCGACATCGTTTAC AAATGGAGTGGCGTTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCA GACAGCCAAGAAAGAAGAAACGAAACAAGATATCACAACAGTATTGAGTG GTCCTGATCGTGAGATGTATGCTTTCGGTAAATGGAAATATCCAAATACT GACGTGTTACAAGTCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATG TGAACATGCAACAGGTGTTGATAAAAACTGTCTCATTGATTGATTCAAAT GTTTTTTAGGGTGTTtgttattataagcatttttttgtgtatttttcaaG TACTATCTTTTGTTTAAGACAATAAAAAG

Coding sequence (CDS) from alignment at scaffold_311:237188..242216+

>TCONS_00058433 ID=TCONS_00058433|Name=TCONS_00058433|organism=Clytia hemisphaerica|type=CDS|length=6960bp|location=Sequence derived from alignment at scaffold_311:237188..242216+ (Clytia hemisphaerica)
TTGGGTGTTGTAATCTATTCAGTCGAGAGTAGAGACAACAGAACGCGCAT
CGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGATGCTTCAGGATGT
TTCCACCGGGTTCTTTGGATTCATCAGACATGGGAATTCATCAAAGTTCC
AATATTAGATGTCAAGAAATTTGTCGTGATAAAGGATATGTGCTCGCCGC
TACTAAAGGTCAGATGTGTCATTGTTCGAATATTTATCCACGAGGAAAAA
AAGTAGTCGATCAAGAATGTTCTACAAGATGTCGTTCATATACACCATGT
CATGATGTCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGCGT
GGTAGGAGATATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAATA
AATGGCAAACGAATGTGGGATATCATAATTCAATGTTGAGACATGTTGGA
TTACTTTACGATGCTGATTGGAGATCTTCTATTGAGAATGGAGGCTGGTC
GAAATGCAATAAGGAACATTACATCAATGGGCTATCAAGAGAAAACCAAT
ACAGTGGATCGTCGTCTGATCCTCTTGGAAGAATCGATTATGCAAGTTGC
CAAAAGGAGCCTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCTATT
CACCAGTGGAAGGGTTTGGAAGTATTGTAAACAAGGATACTTTATGTCTG
GTGTCTTCACTCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAATTC
CATTGTTGCCGACCCaagaaacaaaaagaacaaTGGGGACATTGTTATAA
TCACGATGTATCTTCATCCTTAGATAATAAAGGTTGGTCTACATGTCGAT
CCGGATATTTCATGGCTGGAATGGAGCGAGGTGATTGTGATGGTTTACAC
TGcgtcaatcaaatcaaatgttGTCAAATGGAAAACCTGGCTGTCAGTGA
AAACCCAAAATTGTCCATCAAGCTCAAGGACACCACAAACAAAGGACAAT
TGAAAGAATGCACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAAACC
TACGAATGCAAATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGAATC
TGTATCTTTCAAGATGGAAGACGAATCAGATCCTTTGACTTCGAAACCCG
AACGTGTCAAAAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCAAAC
TACGAGTGCAAGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTACTTT
GACTATCGGCTCTGGCTTCTCCATGACCACGACATTTGGTGTGAAAACAG
CTTTCGAAGCGAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCATTT
GAATTATCAGCATCTTCTTCTCTCAATATTGGTACAAGTAAAACAACAAC
CAAAACGGTAACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTAACC
AGCAAGTTATGATTGATCTCCTTCGACAGAAAATCGACATCGTTTACAAA
TGGAGTGGCGTTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCAGAC
AGCCAAGAAAGAAGAAACGAAACAAGATATCACAACAGTATTGAGTGGTC
CTGATCGTGAGATGTATGCTTTCGGTAAATGGAAATATCCAAATACTGAC
GTGTTACAAGTCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATGTGA
ACATGCAACAGGTGTTGATAAAAACTGTCTCATTGATTGATTGGGTGTTG
TAATCTATTCAGTCGAGAGTAGAGACAACAGAACGCGCATCGCCAAACGT
TCAGCTAGCGTTTACAGCGTGGAAGGATGCTTCAGGATGTTTCCACCGGG
TTCTTTGGATTCATCAGACATGGGAATTCATCAAAGTTCCAATATTAGAT
GTCAAGAAATTTGTCGTGATAAAGGATATGTGCTCGCCGCTACTAAAGGT
CAGATGTGTCATTGTTCGAATATTTATCCACGAGGAAAAAAAGTAGTCGA
TCAAGAATGTTCTACAAGATGTCGTTCATATACACCATGTCATGATGTCC
AGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGCGTGGTAGGAGAT
ATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAATAAATGGCAAAC
GAATGTGGGATATCATAATTCAATGTTGAGACATGTTGGATTACTTTACG
ATGCTGATTGGAGATCTTCTATTGAGAATGGAGGCTGGTCGAAATGCAAT
AAGGAACATTACATCAATGGGCTATCAAGAGAAAACCAATACAGTGGATC
GTCGTCTGATCCTCTTGGAAGAATCGATTATGCAAGTTGCCAAAAGGAGC
CTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCTATTCACCAGTGGA
AGGGTTTGGAAGTATTGTAAACAAGGATACTTTATGTCTGGTGTCTTCAC
TCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAATTCCATTGTTGCC
GACCCaagaaacaaaaagaacaaTGGGGACATTGTTATAATCACGATGTA
TCTTCATCCTTAGATAATAAAGGTTGGTCTACATGTCGATCCGGATATTT
CATGGCTGGAATGGAGCGAGGTGATTGTGATGGTTTACACTGcgtcaatc
aaatcaaatgttGTCAAATGGAAAACCTGGCTGTCAGTGAAAACCCAAAA
TTGTCCATCAAGCTCAAGGACACCACAAACAAAGGACAATTGAAAGAATG
CACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAAACCTACGAATGCA
AATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGAATCTGTATCTTTC
AAGATGGAAGACGAATCAGATCCTTTGACTTCGAAACCCGAACGTGTCAA
AAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCAAACTACGAGTGCA
AGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTACTTTGACTATCGGC
TCTGGCTTCTCCATGACCACGACATTTGGTGTGAAAACAGCTTTCGAAGC
GAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCATTTGAATTATCAG
CATCTTCTTCTCTCAATATTGGTACAAGTAAAACAACAACCAAAACGGTA
ACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTAACCAGCAAGTTAT
GATTGATCTCCTTCGACAGAAAATCGACATCGTTTACAAATGGAGTGGCG
TTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCAGACAGCCAAGAAA
GAAGAAACGAAACAAGATATCACAACAGTATTGAGTGGTCCTGATCGTGA
GATGTATGCTTTCGGTAAATGGAAATATCCAAATACTGACGTGTTACAAG
TCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATGTGAACATGCAACA
GGTGTTGATAAAAACTGTCTCATTGATTGATTGGGTGTTGTAATCTATTC
AGTCGAGAGTAGAGACAACAGAACGCGCATCGCCAAACGTTCAGCTAGCG
TTTACAGCGTGGAAGGATGCTTCAGGATGTTTCCACCGGGTTCTTTGGAT
TCATCAGACATGGGAATTCATCAAAGTTCCAATATTAGATGTCAAGAAAT
TTGTCGTGATAAAGGATATGTGCTCGCCGCTACTAAAGGTCAGATGTGTC
ATTGTTCGAATATTTATCCACGAGGAAAAAAAGTAGTCGATCAAGAATGT
TCTACAAGATGTCGTTCATATACACCATGTCATGATGTCCAGAGCTGTTG
TGGAGGTCCCAACGCATACTCTGTTAGCGTGGTAGGAGATATTGACGTGG
CCAAACAAACGTTGAGAAGACTGGCCAATAAATGGCAAACGAATGTGGGA
TATCATAATTCAATGTTGAGACATGTTGGATTACTTTACGATGCTGATTG
GAGATCTTCTATTGAGAATGGAGGCTGGTCGAAATGCAATAAGGAACATT
ACATCAATGGGCTATCAAGAGAAAACCAATACAGTGGATCGTCGTCTGAT
CCTCTTGGAAGAATCGATTATGCAAGTTGCCAAAAGGAGCCTGGAGATCA
AGTTTGCAACTATCAATTCGCTTTTCTATTCACCAGTGGAAGGGTTTGGA
AGTATTGTAAACAAGGATACTTTATGTCTGGTGTCTTCACTCAACCAGGG
GCTCAAAAAATCTCCGATCTTGCCCAATTCCATTGTTGCCGACCCaagaa
acaaaaagaacaaTGGGGACATTGTTATAATCACGATGTATCTTCATCCT
TAGATAATAAAGGTTGGTCTACATGTCGATCCGGATATTTCATGGCTGGA
ATGGAGCGAGGTGATTGTGATGGTTTACACTGcgtcaatcaaatcaaatg
ttGTCAAATGGAAAACCTGGCTGTCAGTGAAAACCCAAAATTGTCCATCA
AGCTCAAGGACACCACAAACAAAGGACAATTGAAAGAATGCACCATGGAA
GCAAGAGATCTTACACCTGAAAGTAAAACCTACGAATGCAAATCTCTCAG
TAATTTGAAAGATGTGGCAAGTTTGGAATCTGTATCTTTCAAGATGGAAG
ACGAATCAGATCCTTTGACTTCGAAACCCGAACGTGTCAAAAATTATATC
CCTGTTATCTGTATGCCAGCTTCTTCAAACTACGAGTGCAAGAAAGTCTT
AGCTGTTTCAGTGGCACAATCCAGTACTTTGACTATCGGCTCTGGCTTCT
CCATGACCACGACATTTGGTGTGAAAACAGCTTTCGAAGCGAATTGGTTT
GGGCAGAAATTCAAGAATGAAATCTCATTTGAATTATCAGCATCTTCTTC
TCTCAATATTGGTACAAGTAAAACAACAACCAAAACGGTAACCGATACAA
CATGGGTGACCGTTAAGGTTCCAGCTAACCAGCAAGTTATGATTGATCTC
CTTCGACAGAAAATCGACATCGTTTACAAATGGAGTGGCGTTTTTCGTCT
TCTTGGTAAATACAAAATGAATTGGCAGACAGCCAAGAAAGAAGAAACGA
AACAAGATATCACAACAGTATTGAGTGGTCCTGATCGTGAGATGTATGCT
TTCGGTAAATGGAAATATCCAAATACTGACGTGTTACAAGTCGTGGTGAC
TGATAAATATGGTGAGAAGAAAGGATGTGAACATGCAACAGGTGTTGATA
AAAACTGTCTCATTGATTGATTGGGTGTTGTAATCTATTCAGTCGAGAGT
AGAGACAACAGAACGCGCATCGCCAAACGTTCAGCTAGCGTTTACAGCGT
GGAAGGATGCTTCAGGATGTTTCCACCGGGTTCTTTGGATTCATCAGACA
TGGGAATTCATCAAAGTTCCAATATTAGATGTCAAGAAATTTGTCGTGAT
AAAGGATATGTGCTCGCCGCTACTAAAGGTCAGATGTGTCATTGTTCGAA
TATTTATCCACGAGGAAAAAAAGTAGTCGATCAAGAATGTTCTACAAGAT
GTCGTTCATATACACCATGTCATGATGTCCAGAGCTGTTGTGGAGGTCCC
AACGCATACTCTGTTAGCGTGGTAGGAGATATTGACGTGGCCAAACAAAC
GTTGAGAAGACTGGCCAATAAATGGCAAACGAATGTGGGATATCATAATT
CAATGTTGAGACATGTTGGATTACTTTACGATGCTGATTGGAGATCTTCT
ATTGAGAATGGAGGCTGGTCGAAATGCAATAAGGAACATTACATCAATGG
GCTATCAAGAGAAAACCAATACAGTGGATCGTCGTCTGATCCTCTTGGAA
GAATCGATTATGCAAGTTGCCAAAAGGAGCCTGGAGATCAAGTTTGCAAC
TATCAATTCGCTTTTCTATTCACCAGTGGAAGGGTTTGGAAGTATTGTAA
ACAAGGATACTTTATGTCTGGTGTCTTCACTCAACCAGGGGCTCAAAAAA
TCTCCGATCTTGCCCAATTCCATTGTTGCCGACCCaagaaacaaaaagaa
caaTGGGGACATTGTTATAATCACGATGTATCTTCATCCTTAGATAATAA
AGGTTGGTCTACATGTCGATCCGGATATTTCATGGCTGGAATGGAGCGAG
GTGATTGTGATGGTTTACACTGcgtcaatcaaatcaaatgttGTCAAATG
GAAAACCTGGCTGTCAGTGAAAACCCAAAATTGTCCATCAAGCTCAAGGA
CACCACAAACAAAGGACAATTGAAAGAATGCACCATGGAAGCAAGAGATC
TTACACCTGAAAGTAAAACCTACGAATGCAAATCTCTCAGTAATTTGAAA
GATGTGGCAAGTTTGGAATCTGTATCTTTCAAGATGGAAGACGAATCAGA
TCCTTTGACTTCGAAACCCGAACGTGTCAAAAATTATATCCCTGTTATCT
GTATGCCAGCTTCTTCAAACTACGAGTGCAAGAAAGTCTTAGCTGTTTCA
GTGGCACAATCCAGTACTTTGACTATCGGCTCTGGCTTCTCCATGACCAC
GACATTTGGTGTGAAAACAGCTTTCGAAGCGAATTGGTTTGGGCAGAAAT
TCAAGAATGAAATCTCATTTGAATTATCAGCATCTTCTTCTCTCAATATT
GGTACAAGTAAAACAACAACCAAAACGGTAACCGATACAACATGGGTGAC
CGTTAAGGTTCCAGCTAACCAGCAAGTTATGATTGATCTCCTTCGACAGA
AAATCGACATCGTTTACAAATGGAGTGGCGTTTTTCGTCTTCTTGGTAAA
TACAAAATGAATTGGCAGACAGCCAAGAAAGAAGAAACGAAACAAGATAT
CACAACAGTATTGAGTGGTCCTGATCGTGAGATGTATGCTTTCGGTAAAT
GGAAATATCCAAATACTGACGTGTTACAAGTCGTGGTGACTGATAAATAT
GGTGAGAAGAAAGGATGTGAACATGCAACAGGTGTTGATAAAAACTGTCT
CATTGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036821XLOC_036821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058433-exon-scaffold_311-1491911889:237188..237284TCONS_00058433-exon-scaffold_311-1491911889:237188..237284Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1510915933:237188..237284TCONS_00058433-exon-scaffold_311-1510915933:237188..237284Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1575043694:237188..237284TCONS_00058433-exon-scaffold_311-1575043694:237188..237284Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1491911889:238916..239028TCONS_00058433-exon-scaffold_311-1491911889:238916..239028Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1510915933:238916..239028TCONS_00058433-exon-scaffold_311-1510915933:238916..239028Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1575043694:238916..239028TCONS_00058433-exon-scaffold_311-1575043694:238916..239028Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1491911889:239344..239628TCONS_00058433-exon-scaffold_311-1491911889:239344..239628Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1510915933:239344..239628TCONS_00058433-exon-scaffold_311-1510915933:239344..239628Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1575043694:239344..239628TCONS_00058433-exon-scaffold_311-1575043694:239344..239628Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1491911889:240884..242216TCONS_00058433-exon-scaffold_311-1491911889:240884..242216Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1510915933:240884..242216TCONS_00058433-exon-scaffold_311-1510915933:240884..242216Clytia hemisphaericaexon
TCONS_00058433-exon-scaffold_311-1575043694:240884..242216TCONS_00058433-exon-scaffold_311-1575043694:240884..242216Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058433-proteinTCONS_00058433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:237188..242216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.153394 0.083927 0.0496229 0.145645 0.172776 0.0864721 0.0764816 0 0.0849392 0.168198 0.0265779 0.101424 40.143 42.0773 7.13911 17.7666 5.6291 4.41421 63.4201 72.1064 27.3746 26.8483 18.9595 25.7654 39.2153 46.6883 0.350049 0.49726 6.44186 10.9527
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR004991ETX_MTX2
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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