TCONS_00058426 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058426
Unique Name	TCONS_00058426
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2763

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_311:86792..93419+
coding sequence from alignment at scaffold_311:86792..93419+

transcript sequence

>TCONS_00058426 ID=TCONS_00058426|Name=TCONS_00058426|organism=Clytia hemisphaerica|type=transcript|length=2763bp
TaagaattatttaaaaaaatattttaaatacaaATAAATCATGGCTAAAT
ACAGCAGGACTGTAAAAGTTGccattttgtgttgtttatGGTACACTCTT
TCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTACGTAAATATCCATA
CCCACTAACTATATCACTTTTTCACATGACTGCAAACGCTTTTCTCATGT
ACCCTATACTGATGGTGATGGGAAAAGAATACAGTTTTCATTATTCCATG
GCATTCTTTTGGAGATTTGTTTTACCGCtgggatttggaaaacttttggc
aTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTCTGTGTCTTATGCAC
ATACTATCAAGGCATCGCTACCAATCTTCACAGTGACTTTATCCAGAATT
TTGTACCATGAAAAGCAGAGTCAAATGGTCTACCTTTCCCTGATCCCTAT
CGTGTTTGGCGTTTGCATAGCAACCATGACAGAAATATCATTCGAAATTA
TTGGCATGCTGAGTGCACTATTTGCCACTGCAACTTTCAGCGTTCAAAAT
ATCTATTCAAAGCTGGCTTTGAAAGAAGTACGGTTGAACCCAATACAATT
GTTGATGAAAATCTCACAAACAGCTCTCATCATTTGCATTCCTCTCTGGT
TGTTTGTTGACACACCCACCATCGTCACTGATGATCGGCTGGTGAATTTT
GAAGATCAAATCGACTTTTTGTTTCGACTATTGGTCAGCGGTTTGATTAA
CTGGTTGCAGAACATACTTGCGTTCTCCATCTTGAATTTGTTGTCCCCTT
TGAGTTATTCGGTTGCCAACGCAACGAAAAGGATCCTGGTCATTATCAGT
TCTGTCCTGACGTTGAAGAACCCAGTAACCATGACCNAATTCTTGTCATT
ATTAGTTCTGTCCTGACCTTGAAGAACCCGGTAACCATGACCAACTTCTT
TGGAATGATGCTGGCTGTCCTTGGTGTATTCCTTTACAATAGGGCAAAGA
TTTTCCAGAACTCGAAGAAGAATTTATTACCAAAGACAACGAAAGACGTT
GCAGCCGGAGGGGAAGAAGAACAGTATGTCTCCACCAGGTATCGTGTCTT
CCATCGTATGAATGGCATCTAGTGTGCATGTGCCCTAACAGATTAATGGT
ATGACAGTGTAGATCTGGCTTAAGTTCTGAGACCATGCTCagacaaaaca
aaatggtacTACTTGTTGAGGCCAATGTTtgaagtgatgagattttattT
AAGCCAGTCACACTTTAACATCGACCTGAAGTCGGATGGGAAACACttgg
taaaaaaaagaaaacgttcacaaaaactactttctgtcagagaaaatttt
ttgatttcttttatagactttgtttttatcattaTTCCATAACAAAGTCG
TAACAGACGGGGGTCGCTTTAGGAGCACATACTCTCAGGTGTCTTGTAAA
TGGTAAAGTCGGGGATATCAAATTAATAAAAGGGGGAACTTAATCGAATA
ACCCAGAGTTAGATCAAAGACAAAGATCAGGATATTTACAATATTTAGAA
TAGgaaattgttcttttaacagcttaaaatatttacaaaattgataaACA
GTGTATCTATCTTACAGATAAGGATCgagcatggcgttctaaattcatTG
AAACGCCATggaatcgagaaaaaaaattggggaatTCACAAACGGTTTTT
GGTATCTGGGAGTATGTagctttttcttttcaaaattgaaaattttataa
ctgataaaaaaagttttatggtatttcgaaaaaatctttgaaGGAAACTA
CTTTTTTGATCTGTGATTGCTATTTTAATCCtttcaaagtgaaagtttgG
TTGCTTCAGTTTTGAAGACgatgttttttattatttatactTTATAGAGT
TAATTATTTATGATGAATATTATTataggtaggtaggtaggtagtTAGGT
AGGTGACACACGACGTtctttcaacgtccatctaacgttaaatggacgtt
gtggacATTAAATTGATGTTGAAagaacgttatgtgccagctggttAGGG
AGGTGATCCGCTGACAAATGTTTACCTTTGCGGGGGAGTCTACCATAGAT
CAAGAAAAGTCCAAGGGTAATAGTTTTCCTAGAATATTGCTAGCCAACAG
ACACTGATATTGTTTCAACGAAAACTTAAGATCGCAGACTCAGTGATTaa
agcaaggtttttcgtcTGAGACAGGAAATGCATTTTACGTAAATCAGGCC
CGACGGAAGCGGAAAGTCTGGGGAGATTTCAGCGTCCCCACTTCAGGGGC
TGTTCCGAAGGGCCTGCAAATTGGCACATCATATTGGAATTTCGGTGAAT
TATGCTGAATTTTGAgacgaaaaagtttcttttatagacTTCGCTGTGAC
AGAAGAACTGTTAACTCTAAAAACTTTGAAACTATAAGttttggaaagaa
tttttttttttttcaactgatTTGTTTATAAAGAATTGAATAGATAGTta
tatttttgttgttgtttttatttatgaCGCATCTTCgtaaaatacagttg
acgctctctaattcggcGTTCTTATTTTCGATAGggtcccttattcgatg
aaatttaaagtccccgtaaACAAGAAATTCTCATTAACGACGCTgtctta
ttcgataagctcccttattcgatgaaaatctaattccccttgaagatcga
attagagagtgtcaactgtagtAGATTTTATTTTACCAACAAATAATTTT
CCTTCTCTTTTTG

Run BLAST on NCBI

protein sequence of TCONS_00058426-protein

>TCONS_00058426-protein ID=TCONS_00058426-protein|Name=TCONS_00058426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MAKYSRTVKVAILCCLWYTLSSANNVIGKKALRKYPYPLTISLFHMTANA
FLMYPILMVMGKEYSFHYSMAFFWRFVLPLGFGKLLASVSSHISIWKVSV
SYAHTIKASLPIFTVTLSRILYHEKQSQMVYLSLIPIVFGVCIATMTEIS
FEIIGMLSALFATATFSVQNIYSKLALKEVRLNPIQLLMKISQTALIICI
PLWLFVDTPTIVTDDRLVNFEDQIDFLFRLLVSGLINWLQNILAFSILNL
LSPLSYSVANATKRILVIISSVLTLKNPVTMTXFLSLLVLS

Run BLAST on NCBI

transcript from alignment at scaffold_311:86792..93419+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058426 ID=TCONS_00058426|Name=TCONS_00058426|organism=Clytia hemisphaerica|type=transcript|length=6628bp|location=Sequence derived from alignment at scaffold_311:86792..93419+ (Clytia hemisphaerica)
TaagaattatttaaaaaaatattttaaatacaaATAAATCATGGCTAAAT
ACAGCAGGACTGTAAAAGTTGccattttgtgttgtttatGGTACACTCTT
TCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTACGTAAATATCCATA
CCCACTAACTATATCACTTTTTCACATGACTGCAAACGCTTTTCTCATGT
ACCCTATACTGATGGTGATGGGAAAAGAATACAGTTTTCATTATTCCATG
GCATTCTTTTGGAGATTTGTTTTACCGCtgggatttggaaaacttttggc
aTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTCTGTGTCTTATGCAC
ATACTATCAAGGTAATATGAGCTTTTGATCATtgcattacatgttttttt
tctataagcataatgtctataagcatatgcaggcttaGTTTTTGGTAACT
AAACAATGActgtttaagaacaatagaatgataagcataatgcgagcctg
atataggcgCAGACACTTactcataaaaaaaacatgtactgcTAGACAAT
ATTGATTACTGATATTGATCTTTCTACTGATTTTGTAAATTCAtacaatt
ttcaataatttaaaGTCAAACTACCATGGCTCGCACCCCCCCCGCCTGAG
CGGGGGGAGCTACACCTAAAATTTGCCATATAAGAGGTGGGAGCTGCTTG
TTTTTCCTGACAGGCGGGGGGGGGGCTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtttttaatttctctaaacctttatgttttc
atgcaaagtgtgaaccctttaagtgccaatgtcgtatatatcagacatgg
gctatgtaggagggcgaagccaaTTTTTGCCCTGAgaaacttgattctgt
cctccagcgaattagtttgaagttttaccacttggcacctttctatcatt
cagtcaggtccgcgcctaaatcgggcggcgccgaaggcgcctaaaagaaa
gaggagactctaagctatccaacggactataaacgagcttctaactcctt
ctagatctggagatataagcctttaaagtttgaagtagcgattttcttta
aaaaacttagcaaaaaaatgaccgtggcacttaaagggttaaaatgcaaa
aatgaagacattctattgcattctctaaaagtgtacacacatgtaaatag
agctttgtgaatgccataaaatttttcccctatactgggacctaaaattt
tatcaggctggggggaccttgttctcaggggggacctaaatttggcggga
ggacctagaaccccagtcggagccatgaCTACTAGATTTTGATAACATCA
ATAAACATCTAAGTTTAGAGGTTTTTTAATTCGAATAAACCATAACACAT
TCATAACTTTGCTTTAATGATTATATTCAAatgataaattcttgaaaata
tgtttttttatcaGGCATCGCTACCAATCTTCACAGTGACTTTATCCAGA
ATTTTGTACCATGAAAAGCAGAGTCAAATGGTATGTGTTTGTCCATGATT
CATcttagataaaataaaaaacattatttgtttTGCGAATCTGTTCAAAC
TCAAACATTTTCACAGCCTAGAAATAAATAATGTTTACTAAAGTATTTAA
TAGTGTCCTTCTTCGGTAATAATTTCTCACAAATAAAAATAGCCATCTTT
TCTTTCAGGTCTACCTTTCCCTGATCCCTATCGTGTTTGGCGTTTGCATA
GCAACCATGACAGAAATATCATTCGAAATTATTGGCATGCTGAGTGCACT
ATTTGCCACTGCAACTTTCAGCGTTCAAAATATCTATTCAAAGCTGGTAA
AACTTTCTCACGTTTCTCTttggttttttttatattttgtgtgTATAGAT
AGATTTAACATTAATTGACTGTGTTTCTGAAACTAAGAGCATATTGCTTT
TAAAAACGTAAACTAAAACGTCATcattttgttctgtttttctcttgttt
ttacatgaaaagaaactttttgttgGAATTTTTTGTTGGAATCTTTTGTT
GGAATCTTTTTGACCTGATAGTTATGCATGAAAAAAGGGATACAgatcga
aaatgccggaaatatgccggaaaaactgtttttttggcattttctcaaga
ttttatcattagttttttctgattttttgctcaaagaattAAATGTGTAt
aaacaatgcccaaaacatagccgagtccgatttttgagaaaaattttttt
ccggcggaaaatgcctgaaatatgccggaaatcggcgtttttctagattt
tcattggactttttccttataattggttgttttttcattcaaaaacatta
ttgatagcaatgcccaccatcaagaatgtttcaattttcaataaaattga
tttttgaagccggaactattttaaaagttgccggaacaacctattttcgc
cggaaagacagtatttcttgaattNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgtactttat
atatttttatgaaattttgcacactgatgcaatatgacaatacctaaaat
gtgaNNNNcaatatgacaatacctaaaatgtgacggagcccgattttcga
aaaacattttcttccggccgaaaatgccggaaatatgccggaaaaaccgg
tttttgactttttctcaaattttcatttttagttttttctgattttttgt
agaaagatgcgtattcgcaatgctcaaaaaatggcagagttcgatttttg
agaaaaaaatttttcctgttaaaaatgccggaaatcgccgtttttgcaga
ttttcattggattttttccctatatttctatgtttttcacacgaaaacat
tattgataacaatgctcaccatcaagcatgattcaattgtcaataaaact
gatttttgcaaccagaacttcctatttattttttccctacaaccctcccc
cccatcaacaatcaatgagatgaatttattgtgttgtgtattttcgctaa
acgctatattttctgactgatttttaaaatttttcttttcgcattgctat
ctaactttgaTCATCAGGTAGGTTCATTTatcatgttgcttgttttatcT
TATTCTTTTTGAAGGCTTTGAAAGAAGTACGGTTGAACCCAATACAATTG
TTGATGAAAATCTCACAAACAGCTCTCATCATTTGCATTCCTCTCTGGTT
GTTTGTTGACACACCCACCATCGTCACTGATGATCGGCTGGTAAGATGAT
TATTCTTTCCGGGGAagggtccagaaaaaaaatgtgaattttgatttttg
aaaaaatctttcatatAGGAATATTGATAATTCAATAATTCAAATTCCAA
TATTGATAACCTATCACAAAAATCATTATCGGCTGAGTGATATATGATTG
TGACCTTTATTTTTCACTACTATGTGAAAACTATGAAGACATAATTCTGT
AATTGATCCTGAATGGGAAACAGAAAAAATGACACAacgataaaattgaa
aaatagaaaagaaaaataaacagtaaaataacaaaagatacCCAATAAAA
TCTCTGACATTCTTCTCTTTTAGGTGAATTTTGAAGATCAAATCGACTTT
TTGTTTCGACTATTGGTCAGCGGTTTGATTAACTGGTTGCAGAACATACT
TGCGTTCTCCATCTTGAATTTGTTGTCCCCTTTGAGTTATTCGGTTGCCA
ACGCAACGAAAAGGATCCTGGTCATTATCAGTTCTGTCCTGACGTTGAAG
AACCCAGTAACCATGACCNAATTCTTGTCATTATTAGTTCTGTCCTGACC
TTGAAGAACCCGGTAACCATGACCAACTTCTTTGGAATGATGCTGGCTGT
CCTTGGTGTATTCCTTTACAATAGGGTATGTGacatttattttaaaactt
tcgTCTCATTTATCTTACCTGTCATCCTCTTTTAccaattattttttcat
ttgccattttcttctaatttggtagactggagtcgtttataatccaCGTA
ATACAGTGATATTATTGATAATATCAATTTGTATAAGCTATAATTTGTCC
CTTCCACTATTTTTTTCCTTATGTCTCAATTGGTCGTCTAACTACTAATT
TTGAAGCAGATTTACAAAAAGAACAAATAAGAGAAGCACATTATGCAACA
AAGGCTCTTTGTAATTGCAAGAATTTTACCACTGTACCCACAGTTCTATT
CGGTTATCTTACTAATTGTAGGGTAACCCATAGAAAAGTgcaagattttt
tttgaatttggattttttttgtaTCAACCTTCTCACCAATTGTCACGATG
ATTGTTATATTGAAAAGCTAAGGCTGCATAAAtggattttgttgattttt
acagTTGGCCctctcttattcgatcttcaagggaccaagaattttcttcg
aagaGGAGAAAGATTCGAGTTACAGAAAAGATTTTATACTAATTTCTAGC
TGacgggaccaatattttagttcgaattatagaaagattcgaatagtaga
ggttcgaattagagagagttaaaTTTACTTTATCCTATTGATGCTAATTT
TAAATCCGTCCGTTATGTATCAAATCGGTATCAAAGACTTTTATGAATGT
GATCTGATGGCCAaccaaatatttttacaaactcATGTTTAACTTTCATT
CCACACAGGCAAAGATTTTCCAGAACTCGAAGAAGAATTTATTACCAAAG
ACAACGAAAGACGTTGCAGCCGGAGGGGAAGAAGAACAGTATGTCTCCAC
CAGGTATCGTGTCTTCCATCGTATGAATGGCATCTAGTGTGCATGTGCCC
TAACAGATTAATGGTATGACAGTGTAGATCTGGCTTAAGTTCTGAGACCA
TGCTCagacaaaacaaaatggtacTACTTGTTGAGGCCAATGTTtgaagt
gatgagattttattTAAGCCAGTCACACTTTAACATCGACCTGAAGTCGG
ATGGGAAACACttggtaaaaaaaagaaaacgttcacaaaaactactttct
gtcagagaaaattttttgatttcttttatagactttgtttttatcattaT
TCCATAACAAAGTCGTAACAGACGGGGGTCGCTTTAGGAGCACATACTCT
CAGGTGTCTTGTAAATGGTAAAGTCGGGGATATCAAATTAATAAAAGGGG
GAACTTAATCGAATAACCCAGAGTTAGATCAAAGACAAAGATCAGGATAT
TTACAATATTTAGAATAGgaaattgttcttttaacagcttaaaatattta
caaaattgataaACAGTGTATCTATCTTACAGATAAGGATCgagcatggc
gttctaaattcatTGAAACGCCATggaatcgagaaaaaaaattggggaat
TCACAAACGGTTTTTGGTATCTGGGAGTATGTagctttttcttttcaaaa
ttgaaaattttataactgataaaaaaagttttatggtatttcgaaaaaat
ctttgaaGGAAACTACTTTTTTGATCTGTGATTGCTATTTTAATCCtttc
aaagtgaaagtttgGTTGCTTCAGTTTTGAAGACgatgttttttattatt
tatactTTATAGAGTTAATTATTTATGATGAATATTATTataggtaggta
ggtaggtagtTAGGTAGGTGACACACGACGTtctttcaacgtccatctaa
cgttaaatggacgttgtggacATTAAATTGATGTTGAAagaacgttatgt
gccagctggttAGGGAGGTGATCCGCTGACAAATGTTTACCTTTGCGGGG
GAGTCTACCATAGATCAAGAAAAGTCCAAGGGTAATAGTTTTCCTAGAAT
ATTGCTAGCCAACAGACACTGATATTGTTTCAACGAAAACTTAAGATCGC
AGACTCAGTGATTaaagcaaggtttttcgtcTGAGACAGGAAATGCATTT
TACGTAAATCAGGCCCGACGGAAGCGGAAAGTCTGGGGAGATTTCAGCGT
CCCCACTTCAGGGGCTGTTCCGAAGGGCCTGCAAATTGGCACATCATATT
GGAATTTCGGTGAATTATGCTGAATTTTGAgacgaaaaagtttcttttat
agacTTCGCTGTGACAGAAGAACTGTTAACTCTAAAAACTTTGAAACTAT
AAGttttggaaagaatttttttttttttcaactgatTTGTTTATAAAGAA
TTGAATAGATAGTtatatttttgttgttgtttttatttatgaCGCATCTT
CgtaaaatacagttgacgctctctaattcggcGTTCTTATTTTCGATAGg
gtcccttattcgatgaaatttaaagtccccgtaaACAAGAAATTCTCATT
AACGACGCTgtcttattcgataagctcccttattcgatgaaaatctaatt
ccccttgaagatcgaattagagagtgtcaactgtagtAGATTTTATTTTA
CCAACAAATAATTTTCCTTCTCTTTTTG

Coding sequence (CDS) from alignment at scaffold_311:86792..93419+

>TCONS_00058426 ID=TCONS_00058426|Name=TCONS_00058426|organism=Clytia hemisphaerica|type=CDS|length=4380bp|location=Sequence derived from alignment at scaffold_311:86792..93419+ (Clytia hemisphaerica)
ATGGCTAAATACAGCAGGACTGTAAAAGTTGccattttgtgttgtttatG
GTACACTCTTTCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTACGTA
AATATCCATACCCACTAACTATATCACTTTTTCACATGACTGCAAACGCT
TTTCTCATGTACCCTATACTGATGGTGATGGGAAAAGAATACAGTTTTCA
TTATTCCATGGCATTCTTTTGGAGATTTGTTTTACCGCtgggatttggaa
aacttttggcaTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTCTGTG
TCTTATGCACATACTATCAAGGCATCGCTACCAATCTTCACAGTGACTTT
ATCCAGAATTTTGTACCATGAAAAGCAGAGTCAAATGGTCTACCTTTCCC
TGATCCCTATCGTGTTTGGCGTTTGCATAGCAACCATGACAGAAATATCA
TTCGAAATTATTGGCATGCTGAGTGCACTATTTGCCACTGCAACTTTCAG
CGTTCAAAATATCTATTCAAAGCTGGCTTTGAAAGAAGTACGGTTGAACC
CAATACAATTGTTGATGAAAATCTCACAAACAGCTCTCATCATTTGCATT
CCTCTCTGGTTGTTTGTTGACACACCCACCATCGTCACTGATGATCGGCT
GGTGAATTTTGAAGATCAAATCGACTTTTTGTTTCGACTATTGGTCAGCG
GTTTGATTAACTGGTTGCAGAACATACTTGCGTTCTCCATCTTGAATTTG
TTGTCCCCTTTGAGTTATTCGGTTGCCAACGCAACGAAAAGGATCCTGGT
CATTATCAGTTCTGTCCTGACGTTGAAGAACCCAGTAACCATGACCNAAT
TCTTGTCATTATTAGTTCTGTCCTGAATGGCTAAATACAGCAGGACTGTA
AAAGTTGccattttgtgttgtttatGGTACACTCTTTCCTCTGCTAATAA
TGTCATCGGAAAGAAAGCTTTACGTAAATATCCATACCCACTAACTATAT
CACTTTTTCACATGACTGCAAACGCTTTTCTCATGTACCCTATACTGATG
GTGATGGGAAAAGAATACAGTTTTCATTATTCCATGGCATTCTTTTGGAG
ATTTGTTTTACCGCtgggatttggaaaacttttggcaTCTGTTTCATCGC
ATATAAGTATTTGGAAAGTGTCTGTGTCTTATGCACATACTATCAAGGCA
TCGCTACCAATCTTCACAGTGACTTTATCCAGAATTTTGTACCATGAAAA
GCAGAGTCAAATGGTCTACCTTTCCCTGATCCCTATCGTGTTTGGCGTTT
GCATAGCAACCATGACAGAAATATCATTCGAAATTATTGGCATGCTGAGT
GCACTATTTGCCACTGCAACTTTCAGCGTTCAAAATATCTATTCAAAGCT
GGCTTTGAAAGAAGTACGGTTGAACCCAATACAATTGTTGATGAAAATCT
CACAAACAGCTCTCATCATTTGCATTCCTCTCTGGTTGTTTGTTGACACA
CCCACCATCGTCACTGATGATCGGCTGGTGAATTTTGAAGATCAAATCGA
CTTTTTGTTTCGACTATTGGTCAGCGGTTTGATTAACTGGTTGCAGAACA
TACTTGCGTTCTCCATCTTGAATTTGTTGTCCCCTTTGAGTTATTCGGTT
GCCAACGCAACGAAAAGGATCCTGGTCATTATCAGTTCTGTCCTGACGTT
GAAGAACCCAGTAACCATGACCNAATTCTTGTCATTATTAGTTCTGTCCT
GAATGGCTAAATACAGCAGGACTGTAAAAGTTGccattttgtgttgttta
tGGTACACTCTTTCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTACG
TAAATATCCATACCCACTAACTATATCACTTTTTCACATGACTGCAAACG
CTTTTCTCATGTACCCTATACTGATGGTGATGGGAAAAGAATACAGTTTT
CATTATTCCATGGCATTCTTTTGGAGATTTGTTTTACCGCtgggatttgg
aaaacttttggcaTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTCTG
TGTCTTATGCACATACTATCAAGGCATCGCTACCAATCTTCACAGTGACT
TTATCCAGAATTTTGTACCATGAAAAGCAGAGTCAAATGGTCTACCTTTC
CCTGATCCCTATCGTGTTTGGCGTTTGCATAGCAACCATGACAGAAATAT
CATTCGAAATTATTGGCATGCTGAGTGCACTATTTGCCACTGCAACTTTC
AGCGTTCAAAATATCTATTCAAAGCTGGCTTTGAAAGAAGTACGGTTGAA
CCCAATACAATTGTTGATGAAAATCTCACAAACAGCTCTCATCATTTGCA
TTCCTCTCTGGTTGTTTGTTGACACACCCACCATCGTCACTGATGATCGG
CTGGTGAATTTTGAAGATCAAATCGACTTTTTGTTTCGACTATTGGTCAG
CGGTTTGATTAACTGGTTGCAGAACATACTTGCGTTCTCCATCTTGAATT
TGTTGTCCCCTTTGAGTTATTCGGTTGCCAACGCAACGAAAAGGATCCTG
GTCATTATCAGTTCTGTCCTGACGTTGAAGAACCCAGTAACCATGACCNA
ATTCTTGTCATTATTAGTTCTGTCCTGAATGGCTAAATACAGCAGGACTG
TAAAAGTTGccattttgtgttgtttatGGTACACTCTTTCCTCTGCTAAT
AATGTCATCGGAAAGAAAGCTTTACGTAAATATCCATACCCACTAACTAT
ATCACTTTTTCACATGACTGCAAACGCTTTTCTCATGTACCCTATACTGA
TGGTGATGGGAAAAGAATACAGTTTTCATTATTCCATGGCATTCTTTTGG
AGATTTGTTTTACCGCtgggatttggaaaacttttggcaTCTGTTTCATC
GCATATAAGTATTTGGAAAGTGTCTGTGTCTTATGCACATACTATCAAGG
CATCGCTACCAATCTTCACAGTGACTTTATCCAGAATTTTGTACCATGAA
AAGCAGAGTCAAATGGTCTACCTTTCCCTGATCCCTATCGTGTTTGGCGT
TTGCATAGCAACCATGACAGAAATATCATTCGAAATTATTGGCATGCTGA
GTGCACTATTTGCCACTGCAACTTTCAGCGTTCAAAATATCTATTCAAAG
CTGGCTTTGAAAGAAGTACGGTTGAACCCAATACAATTGTTGATGAAAAT
CTCACAAACAGCTCTCATCATTTGCATTCCTCTCTGGTTGTTTGTTGACA
CACCCACCATCGTCACTGATGATCGGCTGGTGAATTTTGAAGATCAAATC
GACTTTTTGTTTCGACTATTGGTCAGCGGTTTGATTAACTGGTTGCAGAA
CATACTTGCGTTCTCCATCTTGAATTTGTTGTCCCCTTTGAGTTATTCGG
TTGCCAACGCAACGAAAAGGATCCTGGTCATTATCAGTTCTGTCCTGACG
TTGAAGAACCCAGTAACCATGACCNAATTCTTGTCATTATTAGTTCTGTC
CTGAATGGCTAAATACAGCAGGACTGTAAAAGTTGccattttgtgttgtt
tatGGTACACTCTTTCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTA
CGTAAATATCCATACCCACTAACTATATCACTTTTTCACATGACTGCAAA
CGCTTTTCTCATGTACCCTATACTGATGGTGATGGGAAAAGAATACAGTT
TTCATTATTCCATGGCATTCTTTTGGAGATTTGTTTTACCGCtgggattt
ggaaaacttttggcaTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTC
TGTGTCTTATGCACATACTATCAAGGCATCGCTACCAATCTTCACAGTGA
CTTTATCCAGAATTTTGTACCATGAAAAGCAGAGTCAAATGGTCTACCTT
TCCCTGATCCCTATCGTGTTTGGCGTTTGCATAGCAACCATGACAGAAAT
ATCATTCGAAATTATTGGCATGCTGAGTGCACTATTTGCCACTGCAACTT
TCAGCGTTCAAAATATCTATTCAAAGCTGGCTTTGAAAGAAGTACGGTTG
AACCCAATACAATTGTTGATGAAAATCTCACAAACAGCTCTCATCATTTG
CATTCCTCTCTGGTTGTTTGTTGACACACCCACCATCGTCACTGATGATC
GGCTGGTGAATTTTGAAGATCAAATCGACTTTTTGTTTCGACTATTGGTC
AGCGGTTTGATTAACTGGTTGCAGAACATACTTGCGTTCTCCATCTTGAA
TTTGTTGTCCCCTTTGAGTTATTCGGTTGCCAACGCAACGAAAAGGATCC
TGGTCATTATCAGTTCTGTCCTGACGTTGAAGAACCCAGTAACCATGACC
NAATTCTTGTCATTATTAGTTCTGTCCTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036814	XLOC_036814	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00058426-protein	TCONS_00058426-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_311	supercontig	scaffold_311:86792..93419 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.44514	4.22179	6.88893	8.5247	7.49314	6.17283	12.1621	12.8071	9.83281	11.382	9.74977	6.34643	5.98655	5.16172	5.51357	6.83111	8.0191	7.66353	3.64732	5.70325	5.88263	5.66007	6.17976	7.86272	5.02609	5.69692	8.62847	7.31804	12.3806	10.4147

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR004853	Sugar_P_trans_dom

Blast

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BLAST of TCONS_00058426 vs. Swiss-Prot (Human)
Match: S35E1 (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 3.650e-73
Identity = 144/295 (48.81%), Postives = 193/295 (65.42%), Query Frame = 2

Query:   65 KVAILCCLWYTLSSANNVIGKKALRKYPYPLTISLFHMTA---------NAFLMYPILMVMGKEYSFHYSMA------FFWRFVLPLGFGKLLASVSSHISIWKVSVSYAHTIKASLPIFTVTLSRILYHEKQSQMVYLSLIPIVFGVCIATMTEISFEIIGMLSALFATATFSVQNIYSKLALKEVRLNPIQLLMKISQTALIICIPLWLFVDTPTIVTDDRLVNFEDQIDFLFRLLVSGLINWLQNILAFSILNLLSPLSYSVANATKRILVIISSVLTLKNPVTMTXFLSLL 904
            +VA LC LWY LS+  NV+ K  L  +P+P+T+SL H+ A          A+ + P   V G   S H S        F+ R+VLPL FGK  ASVS+H+SIWKV VSYAHT+KA++PI+ V LSRI+  EKQS  VYLSLIPI+ GV +AT+TE+SF++ G++SAL AT  FS+QNI+SK  L++ R++ ++LL  +   A+   IP W+ VD    +    L         L  L VSG  N+ QN++AFSILNL+SPLSYSVANATKRI+VI  S++ L+NPVT T  L ++
Sbjct:   29 RVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMM 323

The following BLAST results are available for this feature:

BLAST of TCONS_00058426 vs. Swiss-Prot (Human)

BLAST of TCONS_00058426 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S35E1	3.650e-73	48.81	Solute carrier family 35 member E1 OS=Homo sapiens...	[more]

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TCONS_00058426 (transcript) - C. hemisphaerica