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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058425 ID=TCONS_00058425|Name=TCONS_00058425|organism=Clytia hemisphaerica|type=transcript|length=1842bp
taaaaattttagattttgagaaaattagtttcaaagagagaaactttttt
gtggcgcacccggtagtataatagaccagcggccgaggcagtggattgtg
tcacttcgtagggcaccccttagatcagggcaaatttttgatattatgct
cctaatNTTCGTATCGACCGTAGGAATCGACTTCAAAGTACAGACAGTTT
TTAGGAATGACAAACGAATCAAGCTACAAATTTGGGATACAGCGGGACAA
GAGCGTTACCGAACGATCACGACGGCGTATTACCGTGGCGCGATGGGTTT
CATACTAATGTATGATATCACGAACGAAGAATCTTTCAAAGCTGTCACTG
ATTGGGCGAGCCAAGTGAAAACATATTCGTGGGACAATACACAAGTTGTT
TTGGTGGGTAATAAATGCGACATGGAGGAAGAGCGCGCGGTCACGTACGA
ACAAGGCCGTAAATTGGGGGACCAGCTGGGTTTCCCTTTCTTCGAAGCGT
CGGCCAAAGACAACGTGAACGTTCGCGACGCGTTCGATAAGTTAGTGGAC
GTGATTTGTGAACGAATGACGGATGCGATCGATGGGGATCTTATCCCTGG
CAATGGAACAAAACCTGGTACTACTGACCTCAAATCAAAACCCAATCAAA
ATGGCGAAGGCGGGTGTgcttgctgagtcagcaaaatgaAATGTTTCCCT
CGTAGCAGGTAACATTTTGTCGACATTTAGATCGGTATGTCTCTGGAACA
ATCAACAACTGAAACccacaaattaatttttttaatgatattaagatatt
ggaaaagtgttatcgaaataaatcatcTTATCGGTCGTAGGACGTGCTGT
AAAATCGTCCTGTGGGAGAATCTGTTTTTTGAGTGATTTTGAAAATGCCT
ATGTAATAGTAATAAGTTCTTGCTCGATGCTCACAAGTGTCTTTTCTTTT
GCAACTAATCTAAAATACTCGAAAAATGCTAAGAGTTTCCTTATCTCTAG
AGACCCATTCATTCTAAACTCTGAAACTCTTGAGTGTTTTAAAAAATAAC
TTTCCTTTCATTCACTTTCTTATATTATTCAACTTTCTTAGAATATttag
aaatcaaaatatttattttttaacaatttgaaCTATTTTCTTATTCCTTT
TCGTTCTTTATCTTTCAAACGAAATGAAGCAATTCTGAAACAAAATGGTT
ACCCTTCCTCTTATCTCATTGGTGCATAATAACGTCAGAATTTATTCTAA
GGTTCTGATTGGACGAAATATTTGAGGGGGATTATTATTGAATAGTGTAC
TATTACTGAAGtaaataattttagaaaaaattgtattttatttatttagt
tctTTTTCTTAATTCTATTTCTCTTTTGTGCTCAAATACAGGAATGCTTT
TTTTGCAGAATATTCTGCTAGCCCTGGTTAAACCATTCTATTTACTCGGG
AAACCTATTATCTTGAAACACtgtatttgtttttatcaaCGCCCTGTTTA
ATTAGTTCATCCCCAAATCACTGTATAATAACTTTTGGATACTTTTCCAC
TTTTCATTTGGCTTTAGAAGTACCACGCAGGCCCCTATATTTAAGCACAA
AAGGAAACAGTCATCTGACTGAACACGGGGGTTTATTTTATTTGTCTTAT
GTCCTTGTATGTAAATAGTTTAACAatgttgtgaattttttttgttgtca
tCCGTGGGCCTTTTTGTCTTTTAGTCTGTAGTATCTTtattctaaacatt
tttttgtttttgtatttaatgttttttttgttttttgtgaaatttgtcaT
GAAATTATTTAGGCGGGAAAGATGAAAATATACTAATGCGTA Run BLAST on NCBI protein sequence of TCONS_00058425-protein >TCONS_00058425-protein ID=TCONS_00058425-protein|Name=TCONS_00058425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
MLLXFVSTVGIDFKVQTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAM
GFILMYDITNEESFKAVTDWASQVKTYSWDNTQVVLVGNKCDMEEERAVT
YEQGRKLGDQLGFPFFEASAKDNVNVRDAFDKLVDVICERMTDAIDGDLI
PGNGTKPGTTDLKSKPNQNGEGGCAC Run BLAST on NCBI transcript from alignment at scaffold_311:61302..69121+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058425 ID=TCONS_00058425|Name=TCONS_00058425|organism=Clytia hemisphaerica|type=transcript|length=7820bp|location=Sequence derived from alignment at scaffold_311:61302..69121+ (Clytia hemisphaerica)
taaaaattttagattttgagaaaattagtttcaaagagagaaactttttt
gtggcgcacccggtagtataatagaccagcggccgaggcagtggattgtg
tcacttcgtagggcaccccttagatcagggcaaatttttgatattatgct
cctaatNTTCGTATCGACCGTAGGAATCGACTTCAAAGTACAGACAGTTT
TTAGGAATGACAAACGAATCAAGCTACAAATTTGGGATACAGGTTTGTTC
TGCTTCATTGATTTTAACCCTTTATCCAAGAAATCAGACCCTTTTTTATC
TAACCTTCTGTGAAATTTAGGATGTCACCAATTACTTTTATTCAGGTCTT
CCAATGCTCACATTTTTTCAGATGTGAGAGCTAAGACATGTCATTTTTGT
GGAATAAAACTCCCCACCAGCACGACTCCAGCAtaaattttcaccaaagt
ttacttttattattgttgttgtttcccTGGTAACCACTGAAATGTGAAGT
TACGAACAAAGAAGCTGCGGTCGATGGACCTTTTGCATGCTAGACCTCTA
CAGTGGTGTTTCTTTAttatatttagtattttcaacactttctctggtca
gatctctgatcttcaccatatatatttgGCTCTTCAAAACCACTTCCCTT
TGCTGCAACAGGCCTTAAAGTTCATATTGACCCCTGGTTTTTACAGCAAT
AATctagcagttagtcacactaggaaatctagcgaAAGTTatctgaatca
agttcgcaagacaattaatttaaacttgaaagtttgaagaagaagaaatt
gccGGGAAATAGCctctatccggcagtgcgcggatctaggtgggtccCGT
CTcctccgtagatctttttctagggaagttgatcttcaaattagttctct
caaggttggcttggctcaaattatttcatctatggctcaaattttaggca
atttctcatagtttttgggaacgttaatttcatttaaaagcaCCGGGTTA
TTTTtccatgaatccctttagaagttttgcggcgcattttttgcttgaca
gtcaagtaaacgatatagcgctttcgcagcattaatctttgattcgcatt
ttggcgggacgtaATGTGACTAACTCTCTAGAAAGGCCTTTAGTGCGACA
TAAACAAACAATTTCATTGGTTAAAAAATGTCAAGACATCACACATGTAT
TAGTGCCTATCGTGGGTAGAAACGCTTCTTAACAAGggtaaaattgcaaa
attccaAGGACAGCATCTACGATCAGTCCATATCTACCATTTTCCTTTTC
TGAAAATGTCAGTGATTTTGACAAGTTTACAACAACTTTAGTTTACCTTA
CCTTGGCCTTACCAATTGACCAAGCgcaatgtcatgttgaatattataaa
aactccagcatcacAACATACACATGAAAGCATAATATGTAAGCACATGT
ATTTAAATATTTCTAAGCaacgaaaaggtctatttcacAAAACATTGTCT
TTCCAGATGTAGAAAATAAGGTCTTTAACACTAGTGAATACcctgagtgg
tcctaaatccaacagctctgcctaaatccgaccccccaaataacttttat
gaaaaaaaatctatgtttacaaacattccctctccaagtttaACAATAAA
CtgttgcaagaactctcgaaacaaaacatctttaACAatatgactataat
gtcaagatgtcaactaatgtgatcaaaaacatgtgagttgtaaaaataat
tacctctattctgtattctgaatccgttgctcTTGTTTAATGTTAACAAT
Tcggacaattttgtaataaaaaattatgttttgtaaagaagcaattattg
ttttatttggttcaattggttcagtgtatcaaatttcttagtttagttga
cactttggtatctttgttgcgtcacagcgaaaggtttgtttttattttag
tttgtatctttgaaagaccccatcggatttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtgcgtcacagcgaaaggtttgttttta
ttttagtttgtatctttgaaagaccccatcggatttaggcagggctgtcg
gatttaggaccactcacggtactcaATTGTGTAACCAAAACACAATTGAG
ATCAGAGATGGGGGAATATGTGCTCATTTTGTGTTTGAATTGTACTGTGT
GATGAATGGATTAATGCTCatttaatttgaaatataaaactcaaatcaga
aatttgcaaaaaaaaattcaaaaacatgcaaaaacctttctttttttttc
tctcccctaattttagttttagttggaaaatctttatgtaataaatctaa
aattaatcTCTGTAACATTACTGCACAACTGAGATGAATAAACTCATGCT
TTTCTTGATCAAGTAATGTGTATATACCCAAAACCTTTTTAGTCTTGAAT
AAACTGTTATCAACACAATAAAGTGACAATTCTGAACTGGATCTCAAATT
CCACAGGAACAGAATTAAGATGTTGATAATTTAAAGGACACTTTACATTG
CACTAAAGTCAGTCTGTGGAGCCAGAGCAATATTTGTTAACTTAACAAAT
AGATGACAAAAAGTAGATGGAAGGGTGGCTTATTCGTGCCCAGGCCCTGA
GGAATTGCTTTCACTTTTTCAATTAGTTCACATGGGAGTGTAATGTTTAA
GAGAATCAGTACAATATAAGTGCTTCAGCTTCAGAGAGCTTGATTGTCAA
AACACTTTGCAGCTCTGGATTTTGGACTGTTTAcattcattcaatttttt
tgggcTTTGCTGGTTTTCATTCCAATTTGCTGATGCTGAAATACATTTTT
AAAGGCCCTATTCTAGGTGTAGGGGACAAGGCAAAGTTAAGAATTAAGTC
AAAATTTTGGTACAGTCAGAGTAAGAAGGAGATaacttttcaaacaatta
gATATTTTTGTACGATAGTTGAGCCATTGTTTTGCTTTAATGAAATTTGT
CacttctttgtttatttttctaattaTGCCACTTTTAGAAATCAATAACT
TTGTCGAAGTTCATcatttacaaaaaattaaatactgTAAAAGGTTAGAA
CAGCAACTCAAGGCCAAAAATTGCATATCTTTCATCTCCTGTTATCTTCA
TTCAAATTACAACAATTTTTATGATAAAAAGATTCCTGTGATTCCTTCAA
AACAACATAAACATTTTCTAGTTTGTGCTGCTATATTCctaaagttcttt
aaaaaaaacttattctCTGAATTTTTGGCATTAAAATATTCTGACAATTT
TGACGGTTTGTTGATACCttaaaaggattttttttttgcaacaaAGTCTA
CACtgaaataatataaatttttctAAACCACCATTAATTTCGTTGAATTC
AGAACGTTTATTTGCCCAACAAAGTGTTGGATAGTGTTGGATCAGTCAAA
TTTTGGCCAGCCATAGATGCAAacaatataaatttgatattttgaaaaat
aatttgacagtgggaatttcaaaaaaaaattttagacaGTTTAGGACAGT
TAAAGACAGTTAGAAATTATCTTGGTATTATCCCCAACTAATTTTAGCTA
TGCATTTTTGTTTTGTGACTTTAGGAATAATGTACAAAGTATGTATTCCT
CAGAAATTTATTTCACAATGATAAATGTATGGTAGTTTTGAAAGTACACT
TTGAATCTCAAAAGTGTAATTGTTTTATGTACTATTAAAGCTCTTGAAGT
CAAGAGTTTAAAATCTTGTACACACTTCATAAAAAGGAATGACCTGGCAT
CTTGTACATCtaaggtattttttttgaagataaaGATATGATAGGATTAG
GGTTTTTAGGTGCATCAGTGAAGTATTttcttctcatcatttttctttCA
CATGTGATTTCTCTGCTATTTGTTTAAATGGAAAAATTGAAGTGGAATCT
GAATTTATAACACCAACCTGATTACATACAATTTTCGTTGCTAAGATATT
TCTAAGGTTCATGTGAAAATATTCTCTGTTAAGAAAGTGAAATATATTTG
CAAGTTTTTGATTTCGAAAATacctcttttttcaaaaattatttttttag
agattttaatCAGTTACTTATGCAAAAgtacataaaaaagtttccagACA
TTTTTAATCTATTGTTTCATGAAATAAGTAGCTTACAAACTTCTACCCAT
CTTTTACAGTATATGCACAGTTTAAAACGTTTATCTCTACAATAGGTGTC
ATGCAGGGAACAGAGTTTTTtgtaaaaacttgaaaaaacatACTGTGTGA
TAATCTGCTCTTTTATCAGCCAACCTCTGCTGTAAAGTGTTTTATAGTTG
AGAGCAATTAAACAAATGCTAATGAGATCTGTTTTGCATTTTCTCTCATG
TCAAGTATACgttttaagaacataaggcttcgatggctaaaatgttgaga
acaagtttagaacattttaaggctttgtagactgAATAACACCCGAATTC
TTAggtaaattgacaaaaatacttataaaatggtcaaaataggaacatgt
taagaaagttttaaggcttaaaactcaaaaagttaagaacatctgaaggc
ttcaaatttttagatgttcttataaaaaaagcgtttacGTTCAAAGAACA
GAAAATAAGTGTAAACATGCTTGATACCTACCCTTCTAAATCTATCTCAA
AAGTATGTTACACAACACCATCTCTGGCATCGCCCACGCTGATGCTATAT
TAAAATAAACTGGAAAGATATTTCtaagaagaaaatcaaatagatgaaga
ttattttgaaattaaaaaagaggaaaaagaaaatgaagacgaaaaaatga
aggttttttaCTTTCTACTTTTAAATCATTAGAATATTTGAGCCCCGCTT
TTTCGAAACTGCGTACattcaaatttttcctttttttgggGGAAAAAGTT
ACAAGCCTTTGAAGTAGCCAAAAAATCGCCTAAATTAACAAAGATAGATT
TGCTTTAAAACAGACTTCAAAATCTCTCATTAACAGAAATTTGTCTATGT
TTAAGTATTtctaaagtaaaaagtaaaaccCTTTGTCACCTTATGCTTGA
AAATGaagtaaagtaaaaaatataaagaatgTCTTATATAAAGCAATGAA
GTTTCGGCCCTTGACTGACTTGACTTGGAATATAAGCCAATCTATACAAG
CCCGCTGACACCATACAGTATTGATCTGAGGATAGAAATCTTTCAAATTA
TGCGGTCTTGTACGCTCACTTTCTGATTGATTAAACTACGGAAGTACTGT
CGTACATAACAACAACAACTGACGACATTAAAATCATATCTGATTCTTTT
CCGGGATTGGTCCTCTTCGTTCAAAAAAGAGCCGTAAAATGCGACGATTA
ATGTAGAGAACATCAGTTTGAAGGAGACGGTTGAAATATAAAGAAGTGTC
AGTTGGAGTGGAATTAGGCTAACAGCGTTGTTTCTGTTGAACCTGATATT
ATCAAAAAGAATCtccttttgttttaaagtttgttCTATAGCCTTGAAAG
TTTTTATGTTTACAATGTAgatcaacttcttcaatataTAAAACTTGTTA
TCACTCTTCATCTTTCAGCGGGACAAGAGCGTTACCGAACGATCACGACG
GCGTATTACCGTGGCGCGATGGGTTTCATACTAATGTATGATATCACGAA
CGAAGAATCTTTCAAAGCTGTCACTGATTGGTACGTCATCATCTCCCTTT
TTTTCCGTATAGTCCTCCAATAGGATGCTTTGAGTCCAATTACAGTAATT
AATTAAtgcaccttttcgactgtagccgcCAATTGACGCGCGGGCATTCT
TTATCCGTTTTACCATCCTAAAACCGTCGCAGTCTTTTTTTTCACAccta
tagaaaatagaaaaaggtATACATGGGAATAACTTATCAGAGCAAAGACT
TTAGATACAAAACTCCAActttcgggtcagggctgggaAGCATTCTGGCC
catttattgaaagaaattcCTTCACCGACCCTGATATTATGCCATGCTTG
TTGAGTGAAAGGCTATCGTTTGCCATTATTAGATTACTGAAAAAGCTTTT
TTGCTTTACGCGAtagtaaaaaaaattggccAGTTTGAGCCCTCGAGCCT
TAGCTGATGTGTAACCTTTATCTTCTgtttcacgtttttttatatcagta
caagtgtgactaactgctttACTGGTTTTTAGGGCGAGCCAAGTGAAAAC
ATATTCGTGGGACAATACACAAGTTGTTTTGGTGGGTAATAAATGCGACA
TGGAGGAAGAGCGCGCGGTCACGTACGAACAAGGCCGTAAATTGGGGGAC
CAGCTGGGTTTCCCTTTCTTCGAAGCGTCGGCCAAAGACAACGTGAACGT
TCGCGACGCGTTCGATAAGTTAGTGGACGTGATTTGTGAACGAATGACGG
ATGCGATCGATGGGGATCTTATCCCTGGCAATGGAACAAAACCTGGTACT
ACTGACCTCAAATCAAAACCCAATCAAAATGGCGAAGGCGGGTGTgcttg
ctgagtcagcaaaatgaAATGTTTCCCTCGTAGCAGGTAACATTTTGTCG
ACATTTAGATCGGTATGTCTCTGGAACAATCAACAACTGAAACccacaaa
ttaatttttttaatgatattaagatattggaaaagtgttatcgaaataaa
tcatcTTATCGGTCGTAGGACGTGCTGTAAAATCGTCCTGTGGGAGAATC
TGTTTTTTGAGTGATTTTGAAAATGCCTATGTAATAGTAATAAGTTCTTG
CTCGATGCTCACAAGTGTCTTTTCTTTTGCAACTAATCTAAAATACTCGA
AAAATGCTAAGAGTTTCCTTATCTCTAGAGACCCATTCATTCTAAACTCT
GAAACTCTTGAGTGTTTTAAAAAATAACTTTCCTTTCATTCACTTTCTTA
TATTATTCAACTTTCTTAGAATATttagaaatcaaaatatttatttttta
acaatttgaaCTATTTTCTTATTCCTTTTCGTTCTTTATCTTTCAAACGA
AATGAAGCAATTCTGAAACAAAATGGTTACCCTTCCTCTTATCTCATTGG
TGCATAATAACGTCAGAATTTATTCTAAGGTTCTGATTGGACGAAATATT
TGAGGGGGATTATTATTGAATAGTGTACTATTACTGAAGtaaataatttt
agaaaaaattgtattttatttatttagttctTTTTCTTAATTCTATTTCT
CTTTTGTGCTCAAATACAGGAATGCTTTTTTTGCAGAATATTCTGCTAGC
CCTGGTTAAACCATTCTATTTACTCGGGAAACCTATTATCTTGAAACACt
gtatttgtttttatcaaCGCCCTGTTTAATTAGTTCATCCCCAAATCACT
GTATAATAACTTTTGGATACTTTTCCACTTTTCATTTGGCTTTAGAAGTA
CCACGCAGGCCCCTATATTTAAGCACAAAAGGAAACAGTCATCTGACTGA
ACACGGGGGTTTATTTTATTTGTCTTATGTCCTTGTATGTAAATAGTTTA
ACAatgttgtgaattttttttgttgtcatCCGTGGGCCTTTTTGTCTTTT
AGTCTGTAGTATCTTtattctaaacatttttttgtttttgtatttaatgt
tttttttgttttttgtgaaatttgtcaTGAAATTATTTAGGCGGGAAAGA
TGAAAATATACTAATGCGTA Coding sequence (CDS) from alignment at scaffold_311:61302..69121+ >TCONS_00058425 ID=TCONS_00058425|Name=TCONS_00058425|organism=Clytia hemisphaerica|type=CDS|length=1593bp|location=Sequence derived from alignment at scaffold_311:61302..69121+ (Clytia hemisphaerica)
atgctcctaatNTTCGTATCGACCGTAGGAATCGACTTCAAAGTACAGAC
AGTTTTTAGGAATGACAAACGAATCAAGCTACAAATTTGGGATACAGCGG
GACAAGAGCGTTACCGAACGATCACGACGGCGTATTACCGTGGCGCGATG
GGTTTCATACTAATGTATGATATCACGAACGAAGAATCTTTCAAAGCTGT
CACTGATTGGGCGAGCCAAGTGAAAACATATTCGTGGGACAATACACAAG
TTGTTTTGGTGGGTAATAAATGCGACATGGAGGAAGAGCGCGCGGTCACG
TACGAACAAGGCCGTAAATTGGGGGACCAGCTGGGTTTCCCTTTCTTCGA
AGCGTCGGCCAAAGACAACGTGAACGTTCGCGACGCGTTCGATAAGTTAG
TGGACGTGATTTGTGAACGAATGACGGATGCGATCGATGGGGATCTTATC
CCTGGCAATGGAACAAAACCTGGTACTACTGACCTCAAATCAAAACCCAA
TCAAAATGGCGAAGGCGGGTGTgcttgctgaatgctcctaatNTTCGTAT
CGACCGTAGGAATCGACTTCAAAGTACAGACAGTTTTTAGGAATGACAAA
CGAATCAAGCTACAAATTTGGGATACAGCGGGACAAGAGCGTTACCGAAC
GATCACGACGGCGTATTACCGTGGCGCGATGGGTTTCATACTAATGTATG
ATATCACGAACGAAGAATCTTTCAAAGCTGTCACTGATTGGGCGAGCCAA
GTGAAAACATATTCGTGGGACAATACACAAGTTGTTTTGGTGGGTAATAA
ATGCGACATGGAGGAAGAGCGCGCGGTCACGTACGAACAAGGCCGTAAAT
TGGGGGACCAGCTGGGTTTCCCTTTCTTCGAAGCGTCGGCCAAAGACAAC
GTGAACGTTCGCGACGCGTTCGATAAGTTAGTGGACGTGATTTGTGAACG
AATGACGGATGCGATCGATGGGGATCTTATCCCTGGCAATGGAACAAAAC
CTGGTACTACTGACCTCAAATCAAAACCCAATCAAAATGGCGAAGGCGGG
TGTgcttgctgaatgctcctaatNTTCGTATCGACCGTAGGAATCGACTT
CAAAGTACAGACAGTTTTTAGGAATGACAAACGAATCAAGCTACAAATTT
GGGATACAGCGGGACAAGAGCGTTACCGAACGATCACGACGGCGTATTAC
CGTGGCGCGATGGGTTTCATACTAATGTATGATATCACGAACGAAGAATC
TTTCAAAGCTGTCACTGATTGGGCGAGCCAAGTGAAAACATATTCGTGGG
ACAATACACAAGTTGTTTTGGTGGGTAATAAATGCGACATGGAGGAAGAG
CGCGCGGTCACGTACGAACAAGGCCGTAAATTGGGGGACCAGCTGGGTTT
CCCTTTCTTCGAAGCGTCGGCCAAAGACAACGTGAACGTTCGCGACGCGT
TCGATAAGTTAGTGGACGTGATTTGTGAACGAATGACGGATGCGATCGAT
GGGGATCTTATCCCTGGCAATGGAACAAAACCTGGTACTACTGACCTCAA
ATCAAAACCCAATCAAAATGGCGAAGGCGGGTGTgcttgctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058425-exon-scaffold_311-1491911889:61302..61543 | TCONS_00058425-exon-scaffold_311-1491911889:61302..61543 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1510915933:61302..61543 | TCONS_00058425-exon-scaffold_311-1510915933:61302..61543 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1575043694:61302..61543 | TCONS_00058425-exon-scaffold_311-1575043694:61302..61543 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1491911889:67020..67131 | TCONS_00058425-exon-scaffold_311-1491911889:67020..67131 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1510915933:67020..67131 | TCONS_00058425-exon-scaffold_311-1510915933:67020..67131 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1575043694:67020..67131 | TCONS_00058425-exon-scaffold_311-1575043694:67020..67131 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1491911889:67634..69121 | TCONS_00058425-exon-scaffold_311-1491911889:67634..69121 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1510915933:67634..69121 | TCONS_00058425-exon-scaffold_311-1510915933:67634..69121 | Clytia hemisphaerica | exon |
| TCONS_00058425-exon-scaffold_311-1575043694:67634..69121 | TCONS_00058425-exon-scaffold_311-1575043694:67634..69121 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:61302..69121 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
BLAST of TCONS_00058425 vs. Swiss-Prot (Human)
Match: RAB3A (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 9.893e-81 Identity = 120/174 (68.97%), Postives = 145/174 (83.33%), Query Frame = 2
Query: 158 FVSTVGIDFKVQTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFKAVTDWASQVKTYSWDNTQVVLVGNKCDMEEERAVTYEQGRKLGDQLGFPFFEASAKDNVNVRDAFDKLVDVICERMTDAID--GDLIPGNGTKPGTTDLKSKPNQNGEGGCAC 673
FVSTVGIDFKV+T++RNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF AV DW++Q+KTYSWDN QV+LVGNKCDME+ER V+ E+GR+L D LGF FFEASAKDN+NV+ F++LVDVICE+M++++D + G P +D + P+Q+ CAC
Sbjct: 51 FVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQD----CAC 220
The following BLAST results are available for this feature:
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