TCONS_00058410 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058410
Unique NameTCONS_00058410
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058410 ID=TCONS_00058410|Name=TCONS_00058410|organism=Clytia hemisphaerica|type=transcript|length=185bp
GACCACTTTGCAGCTCTAAgctcttgattttctttattattggatttatt
tttctttgtatattttACATCTTGATTTTCATTGCTTGCGGTCTTTTTTG
GTTTGCGCTTTTTACTGTCTGTGACACATTTTGGacagatatttttttta
ttgagtTTTATATCATTTAAATTGACTAAGCGATT
Run BLAST on NCBI

transcript from alignment at scaffold_310:142268..142452

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058410 ID=TCONS_00058410|Name=TCONS_00058410|organism=Clytia hemisphaerica|type=transcript|length=185bp|location=Sequence derived from alignment at scaffold_310:142268..142452 (Clytia hemisphaerica)
AATCGCTTAGTCAATTTAAATGATATAAAactcaataaaaaaaatatctg
tCCAAAATGTGTCACAGACAGTAAAAAGCGCAAACCAAAAAAGACCGCAA
GCAATGAAAATCAAGATGTaaaatatacaaagaaaaataaatccaataat
aaagaaaatcaagagcTTAGAGCTGCAAAGTGGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036798XLOC_036798Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058410-exon-scaffold_310-1491911889:142268..142452TCONS_00058410-exon-scaffold_310-1491911889:142268..142452Clytia hemisphaericaexon
TCONS_00058410-exon-scaffold_310-1510915933:142268..142452TCONS_00058410-exon-scaffold_310-1510915933:142268..142452Clytia hemisphaericaexon
TCONS_00058410-exon-scaffold_310-1575043694:142268..142452TCONS_00058410-exon-scaffold_310-1575043694:142268..142452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_310supercontigscaffold_310:142268..142452 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058410 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top