TCONS_00058405 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058405
Unique NameTCONS_00058405
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058405 ID=TCONS_00058405|Name=TCONS_00058405|organism=Clytia hemisphaerica|type=transcript|length=148bp
CAGGTAGTTTACTTTCTACGAAGGACTTGGCCATGATAGTATGTAAAGGA
CCGGCTATGTAAAAGGCCAGCTTTTTCAGCATGACTGGGTGAATCTCATC
AGGTCCTAGCGATTTATTAGGATTCAAACCTTTTAGTTCCTTTTTGAC
Run BLAST on NCBI

transcript from alignment at scaffold_310:17793..17940

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058405 ID=TCONS_00058405|Name=TCONS_00058405|organism=Clytia hemisphaerica|type=transcript|length=148bp|location=Sequence derived from alignment at scaffold_310:17793..17940 (Clytia hemisphaerica)
GTCAAAAAGGAACTAAAAGGTTTGAATCCTAATAAATCGCTAGGACCTGA
TGAGATTCACCCAGTCATGCTGAAAAAGCTGGCCTTTTACATAGCCGGTC
CTTTACATACTATCATGGCCAAGTCCTTCGTAGAAAGTAAACTACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036793XLOC_036793Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058405-exon-scaffold_310-1491911889:17793..17940TCONS_00058405-exon-scaffold_310-1491911889:17793..17940Clytia hemisphaericaexon
TCONS_00058405-exon-scaffold_310-1510915933:17793..17940TCONS_00058405-exon-scaffold_310-1510915933:17793..17940Clytia hemisphaericaexon
TCONS_00058405-exon-scaffold_310-1575043694:17793..17940TCONS_00058405-exon-scaffold_310-1575043694:17793..17940Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_310supercontigscaffold_310:17793..17940 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058405 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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