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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058402 ID=TCONS_00058402|Name=TCONS_00058402|organism=Clytia hemisphaerica|type=transcript|length=1153bp
ATTCACTCAATATATATAATCCTTGAACTTCGCTGGCACCTTTTTTGGAC
GCTTTGATAAACTACGTCGCTTTAGAGGTCTTATTGGAGAATGTTCAATT
GATTCTTCCCGAAGAAAACTGTGATCATTATTTTTATCAgtcaatttcat
aatttttgcaGGTTGTCGAGTTGGAATTtgcttctttgtttttttcagtg
ATAATCTTTCCCGGTTAATTTTACGTTTTACTACAGGCGAAGTTTCGAAA
TCAGATATGGAAGAATCAATGCCCAAAACACAATCAGATGTTGTAGATGG
TTTTCTCTTTGATGATTCATCCAGAAGAACAGCAatgCATTCACGAAATT
TCAATAACAAACCTCTGAAGCTAATTCTTTATTATTAACGGCAGAAATCT
TGTTTCCAAACAATGACGGCTTGGAAAATTCAGTTGATTTTACTGGTGAG
ATTGTTATTGGTCACATTGGATCTTCCTTAGAGATTCCAGAAATGTTGTT
GCAAAAGAATGTTTGACTGGTAGCTGGTGTGTTGTGGCAAGAATTTTGAT
TGATTGGTGATGTCCGTACTACCCCTGGACTCATCTCTTCAATGTCGCTC
TTTAATTCCACCGATTGATTCGTTTTCTTTTCAATCTCTTAGTCGATGTC
TGTTGTGTATAACATTTCTGGTGTCTCAAGATGTGGCGCATCTGGCTCTT
GTGAATGTTCCATTTCTTGAATTAATGCAATCACGTCCATATGCTAGATT
AATATAAATAGGAGAAATTTTAcaaatacaaaataattttcaaggTTTAT
GGCCgcaatatattttcaaattatatcATTTTCAGATTGGATGTGCAATT
TAGCACCattgttatttttttagcaTCAATTTAAGCTATTATACATACCT
TTAAGTACGATTCATCCTCTATATACATGAATAGGTCATCTTTAGCTACA
TTTGCAAGTGAGAAAACGTTTTGATCGTACGTGAAGTTCATTTCCAGTTT
TTCAACATCATAAATTTCGGCTATTTGGTCCATCATacatttgaaaagat
tttggcCTATATGGTGGTTTCTCCACATGATTTTGCATAAGTGTGCACTA
AAAAACAAGACAGTACACTATATTGAGAAATAGTGTCATAAGGATTTTGT
CAG Run BLAST on NCBI transcript from alignment at scaffold_310:125665..127134- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058402 ID=TCONS_00058402|Name=TCONS_00058402|organism=Clytia hemisphaerica|type=transcript|length=1470bp|location=Sequence derived from alignment at scaffold_310:125665..127134- (Clytia hemisphaerica)
ATTCACTCAATATATATAATCCTTGAACTTCGCTGGCACCTTTTTTGGAC
GCTTTGATAAACTACGTCGCTTTAGAGGTCTTATTGGAGAATGTTCAATT
GATTCTTCCCGAAGAAAACTGTGATCATTATTTTTATCAGTCAATTTCAT
AATTTTTGCAGGTTGTCGAGTTGGAATTTGCTTCTTTGTTTTTTTCAGTG
ATAATCTTTCCCGGTTAATTTTACGTTTTACTACAGGCGAAGTTTCGAAA
TCAGATATGGAAGAATCAATGCCCAAAACACAATCAGATGTTGTAGATGG
TTTTCTCTTTGATGATTCATCCAGAAGAACAGCAGTAAGATTCTTTGATG
TTAATGTTGTGAGACCTTTTTTCGCTGATGCACTTTTTGGAGTGGACATG
ATCTGTGATTTACTTTCGTTACCCATTTTAACAAATTCAAAGTTGGATGG
CATATGAATACCTTTGGGTTTCAATTTCTTCCGCTGAAAATGATTGAATA
ATTTAAGCTAGTTCATGGGGTATTCTGTGAAAGAAAGTATGCTAGAAGCC
ACCTTAAATGTAACAGATTCTTGACAAAGAATTTTGAAATTTAAAGTATT
TCTTTTAAAAAATGTTTTCACAAAATTGAAAATAATTTTTCTATTTTTCA
GATGCATTCACGAAATTTCAATAACAAACCTCTGAAGCTAATTCTTTATT
ATTAACGGCAGAAATCTTGTTTCCAAACAATGACGGCTTGGAAAATTCAG
TTGATTTTACTGGTGAGATTGTTATTGGTCACATTGGATCTTCCTTAGAG
ATTCCAGAAATGTTGTTGCAAAAGAATGTTTGACTGGTAGCTGGTGTGTT
GTGGCAAGAATTTTGATTGATTGGTGATGTCCGTACTACCCCTGGACTCA
TCTCTTCAATGTCGCTCTTTAATTCCACCGATTGATTCGTTTTCTTTTCA
ATCTCTTAGTCGATGTCTGTTGTGTATAACATTTCTGGTGTCTCAAGATG
TGGCGCATCTGGCTCTTGTGAATGTTCCATTTCTTGAATTAATGCAATCA
CGTCCATATGCTAGATTAATATAAATAGGAGAAATTTTACAAATACAAAA
TAATTTTCAAGGTTTATGGCCGCAATATATTTTCAAATTATATCATTTTC
AGATTGGATGTGCAATTTAGCACCATTGTTATTTTTTTAGCATCAATTTA
AGCTATTATACATACCTTTAAGTACGATTCATCCTCTATATACATGAATA
GGTCATCTTTAGCTACATTTGCAAGTGAGAAAACGTTTTGATCGTACGTG
AAGTTCATTTCCAGTTTTTCAACATCATAAATTTCGGCTATTTGGTCCAT
CATACATTTGAAAAGATTTTGGCCTATATGGTGGTTTCTCCACATGATTT
TGCATAAGTGTGCACTAAAAAACAAGACAGTACACTATATTGAGAAATAG
TGTCATAAGGATTTTGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058402-exon-scaffold_310-1575043694:126801..127134 | TCONS_00058402-exon-scaffold_310-1575043694:126801..127134 | Clytia hemisphaerica | exon |
| TCONS_00058402-exon-scaffold_310-1575043694:125665..126483 | TCONS_00058402-exon-scaffold_310-1575043694:125665..126483 | Clytia hemisphaerica | exon |
| TCONS_00058402-exon-scaffold_310-1510915933:126801..127134 | TCONS_00058402-exon-scaffold_310-1510915933:126801..127134 | Clytia hemisphaerica | exon |
| TCONS_00058402-exon-scaffold_310-1510915933:125665..126483 | TCONS_00058402-exon-scaffold_310-1510915933:125665..126483 | Clytia hemisphaerica | exon |
| TCONS_00058402-exon-scaffold_310-1491911889:126801..127134 | TCONS_00058402-exon-scaffold_310-1491911889:126801..127134 | Clytia hemisphaerica | exon |
| TCONS_00058402-exon-scaffold_310-1491911889:125665..126483 | TCONS_00058402-exon-scaffold_310-1491911889:125665..126483 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_310 | supercontig | scaffold_310:125665..127134 - |
Blast
The following BLAST results are available for this feature:
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