TCONS_00058317 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058317
Unique NameTCONS_00058317
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2636

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058317 ID=TCONS_00058317|Name=TCONS_00058317|organism=Clytia hemisphaerica|type=transcript|length=2636bp
tatccTAGTAAGTGCGTTCGCAGCTCGATTTTCTGTCTTCCCGAAATCTT
TCTCTCACTCACTCAGCCAGAGTCNTTCCGCGCCACCATAATTTTATCAG
GGTGAGACTGACCATAACTAAAGGTGTCACTAGCGTCCAGTTTTTCCCGA
TGCCGGTAACCTCAGATTATCAATACATTATCTGGAGGTGGGAATCATCT
GACATCGACTTCATTTTTGGTGTGTGGCGTGGTACCCTGAATTCTTCATA
AACTTCCCTTAATATATAGTTTTACGAAACATGTCTGGCATcgtgagaaa
atcaaaatttaggaaCACTTATGGTACTGAAGTTAAAAAGGAATTTTGGT
ATGAGAATATACGTCCCTCAAATTGTGCATTCGATGGAACATTCATAGCT
TGCAATGGGAAATTTGTTGCTTTCTGTGTGGAAGTTGGCGGAGCAGGGGC
TTTTACCGTCATACCTGTTTCAAAGgctGGCCGTTTGGATACTGATCTTC
CAAAAGTATCTGCACACAGAGAATACATTTTGGACATAAAATGGAACCCT
TTTGATGATAGTATGCTAGCTACAAGTTGTGAAGATGGAAGCATTAGGTT
ATGGCAGTTTTCAGATCATGGTTTACTGAGCAACATAGATGAGTCTAAAG
CACTTTTAACCTTCCAATTGCATCAAAGAAGATGCACACAAATTAGTTGG
CATCCAATAgtagaaaatgttttaatgaGTGTATCTCAAGAACCTCAGAT
AGCAATATGGAACCTTGATAATGGCGAAGCAGAGAGAGTTATTAATGCAC
CTAAAGTAATACATTTCGCTGAATGGAGTATCAAAGGTGACAAGATTGTG
ACCACAGACAAAGAAAAGATGATTCGAATCTATGATGCAAGATCTGGAGA
AGAACTTATGAGCTGCAAAGGACATGAAGGACAGAAACCCCAACGTGTTG
TATTCACCTTTGATGATACCATGCTTTTCTCCTGTGGTTTCTCCAAAATG
AGTGAAAGACAATATGCAGCATGGAGTGTCACTGATaaaattaaACAATT
GGACATAGGTGAGCTGGATTCATCAAACGGTACACTCAACCCAATCTACG
ATCCAGATACACAAATGGTCTATGTTGTTGCAAAGGGTGATTCTGTGATC
AGGTACTACGAGCTTGTGAAGGAAGATCCATACTTCCATTACATCACCAC
TTTCCAGAGTAAGGACGTACAAAAAGGTTTCACCACCATCCCGAAGCGAT
GTGTAGATGTCAACTCATGTGAGGTCATGAAGTTCTACAAAATTGTCGCT
GGCTCAGGAAACAAACCAGCCTTGATCAAACCAATCTCTTTCACTGTCCC
CAGAAAGAGTGAATTATACCAAGATGATTTGTACCCGGACGCTATTTCGA
ATGAAAGCTCATGTGATGAACCATCTGAATGGTTCAGCGGAACCAACTTT
GAGCCTAAACGTATAAGCATGTCGCAATTCTTCAAAGGTGCGGTCACTCC
ATCCAGCAGTGCTGGTGGTGGCCTGAAAAAGGGTGGTTTGAAAGGATTGA
AAGCCAAGAAAGAATCGAAGGCAGCTGGTAAGCCTGCAGCTGCACCTTCC
CCGACTCCGTCGGAAGAAAAATCGAGCCCAACAcCGGTTGCTAAATCTGC
ACCAGTATCTTCAGCTCCTTCCGCCTCCTCGCCCGCGCCCTCCTCTGGCG
GTGTTGACAAAGATTACGTTGCCGGTCTTGAGAAAGAGATCAAAGGTCTA
AAGGTGAGTAATAAAGAGATGGAGAAAGAAATCAAATCATTGAACGACAA
ACTTAAGGACTTTGATAAGTTGTCAGGTGATGTGAAATTACTTTGTGATG
CTGTCAAGAAGAATAACGAACGCTTGACTTCACTAGAAGCTCTCGTCGAA
GAGGGAGACGACGAGGAATAGACGATTATCCGCTCCCCGATCACAATGCT
TTCACCATTTACGGGGTGGATAACGAAAATACTTGAGCTCGTTTGCTTCG
AACATCACATGCGTTGAACTGTAAAATGAACCAAACAAACAAAACGAAAA
AGGGGTTTtagaaagttaaaaacaaattaGTAAgtgattcaaattcaaat
taattAAATACGTAATGGtgttttataattttaaattcgATTCCTTTTTC
CCTcgtaacatttttttttttgattaaatGGAAACTTTATggattattcc
tgattattctctgaaaattttgttattttttttttcttgtaaattttaat
ttttttttcttaaaatttcgtaTCCTTTACTGttagttttgtcatttttt
aagaaatctttTTATAGAACTAGGActtgctgactttttttctaGATTTA
GTGGCTTGTGAGAATGGCAAATTTCCCGCTTCCCGTTGCTTTCCACGAAT
AAATGATTTTTACTCATGACTATAATGACGTATTATGTAGATAGATTTGC
ATTGTAGTAATTTTTCTGTAATAATATCTTTTGTTCTATCTAAAAGGAGA
TGAAATAATGAATGATTAGGTGGTACacattatccaaaattaaagtttta
ttATTACACGCCCGTAAATTATTTCCTAACTTTTAACTAATTGTAAAATC
AATTTGCATGGAAGACGCATACAGCCAATTTTACAT
Run BLAST on NCBI

transcript from alignment at scaffold_309:797670..807846-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058317 ID=TCONS_00058317|Name=TCONS_00058317|organism=Clytia hemisphaerica|type=transcript|length=10177bp|location=Sequence derived from alignment at scaffold_309:797670..807846- (Clytia hemisphaerica)
TATCCTAGTAAGTGCGTTCGCAGCTCGATTTTCTGTCTTCCCGAAATCTT
TCTCTCACTCACTCAGCCAGAGTCNTTCCGCGCCACCATAATTTTATCAG
GGTGAGACTGACCATAACTAAAGGTGTCACTAGCGTCCAGTTTTTCCCGA
TGCCGGTAACCTCAGATTATCAATACATTATCTGGAGGTGGGAATCATCT
GACATCGACTTCATTTTTGGTGTGTGGCGTGGTACCCTGAATTCTTCATA
AACTTCCCTTAATATATAGTTTTACGAAACATGTCTGGCATCGTGAGAAA
ATCAAAATTTAGGAACACTTATGGTACTGAAGTTAAAAAGGAATTTTGGT
ATGAGAATATACGTCCCTCAAATTGTGCATTCGATGGAACATTCATAGCT
TGCAATGGGAAATTTGTTGCTTTCTGTGTGGAAGTTGGCGGAGCAGGGGC
TTTTACCGTCATACCTGTTTCAAAGGTGAGATTTACTTGTATGTTTCATA
GAAAATGAAAAAATTTCTTCAGATTTCAACCACAGCAAATGATCAATATT
TGGCTGGCAAAAGTTTCATTTTCTACCTTATTGTGTTGTTATAACCCAGT
CCCAGATAGAAGTCAATCAAACTGTACCATTACTGAAATTTATTGAACGT
CTGAGAAATTCTGGTAAAGTTCTATAACTTTTCAATATATGTTCAATCGC
AATACACTGTTTTTAGGAGTCTCCCTATATCTCGTACTTTTACCTACTGT
TTTTTACGGGTGGAGAGTGAAGTTTCCCGCAGTCGCTAAAATTAAAACAA
TGGAAAATTGTTTGGACGCTTGCGCAGTCAACACTCCTAAACAGTGTAAT
CCACGCGTTTGATTTTGATAACTGTAGAACAGATAGGCTATTTCATTGTG
ACATCCATCCATACTCATTTTGTCACAGCAAATGTCAATATGACGTTAGG
GGGGTAGGGGTTTTTTACCTTGATGTTTTTTTCTGTGGTAAAATGTTGCC
ACTCTTCCAGTTAGCCCGTTAGTCACATTAGAAAATCAAGCTTTCAGAAA
AAATAACATCCATCATCTACACACAGTCTGGGAAATCCTCTCAATCAATT
GCACGCTTATGCTCGAGGCCGTAAGCCCGCAATTGCACGGTTATCAAAAT
GGCAGAATTTTTAAGCGTGTAATTACACGCTTATCAAAATTGTTCTGAAA
CGGGTGGTAAGCGGTAAGCGTGCAATTGCACCCTTTATTATTCTGACACG
CAATTCCTTCCGAAAGCTCTGTTGAATTTCAAAAGCTTAGGGCAGTTTTA
CTCAAAATTTATCGTAGAAGAAGATTCCGTAAAAATGGATTGCCCGTTAA
ACCATGCCTTTGGCCGAATTAGAGAATTCTGAACCCCTTGAAATCCCTAA
GCAATTTCAACCAGGGCGGGAGCGGGCTATTTATGACCATGCAATTGCGC
GCTTACGCCTTCGGAACATAAGCGTGCAATTGAGAGGATTTCNCGGCCGA
ATTAGAGAATTCTGAACCCCTTGAAATCCCTAAGCAATTTCAACCAGGGC
GGGAGCGGGCTATTTATAACCATGCAATTGCGCGCTTACGCCTTCGGAAC
ATAAGCGTGCAATTGAGAGGATTTCCCAGACTGACACAGGATGTATTTGC
AACAACAAGGATGAGAATTACCTGAATCTCAAGTTCCCAAGACAATTAAT
TAAAACTTGAAAACTTAAAATGAGACAAAATGACCGATTGCAAACGTGCA
GCAGCCACAATATCAACCAACCAAATTTTGTCATTCAATTCCCAAGAATT
TTTAAGGCCTTGTTTATATGCTGAAGTAAAAATAGTTTCTCACATGTACA
TGGGTCAGTGTTTGAGGTCCAGCAAAATTTCCAGGAAATAGGTGGGTTAT
GTCTCCCTCGTAGATCTTTTTCTTGGGAAGTTGATCTTCAAATTAATTTT
CAAGATTGGCTTAGCTCAAATTTTTTCATCCATGGCTCAAATTTTAGGCA
ATTTCTCATAGTTTTTGAAAATGTTAATTTCATTAAAAAGCGCTGGGTTA
ATTTTCCCTTTTAAGAGCCCCTTTAGAAGTTTTGCGGTGCAATTTTTTGC
TTGGAAGTTAAGTAAACGATTAGTGCTTTCGCAGCATTTATCTTTGATAC
GCATTTCGGCGGGATGCTAGTGTGACTAATTGTCTGCAAAATATATTGGG
TGAATAATAATAATTTTCGCAACTATGACTTTAATCGTTTCCTTGTTGAA
TATCTCCTTTGCAGTATTTCATTTTATTTTTGCTTTCCCGTCTCATGTTT
GGAGTGATTAGTCTACTACAAATTTGTAGATTTGGGGGATTTGGAACATT
TTCTATGTTTTTTTTTTGCGCAAACCCCTGTAACTATGGGTAAGCACCTC
ATTGCTAAGATGTTGGCTTAAAATCGAAAATGCAACCCAGACTCAGGGGG
GGGGGCGGTAGTAAAATCTCAAACATAATGACGTTTACTACGGTGGTGGT
AAAAAATTTTACTACCCAGGGTAGTTAAATACTAAAATGGGTGGTATATA
TGTGTTAAATGTTGGAAAAATTTCACTACCTGGGTAGTAAAAACTGGTAA
ATTAGCAAATTTTGTCACCCCTAATTAAGGGGGATTAATTTTTTGTTGGT
TTCCAAACTACCGTAACTTTGTGTAATGCCAACATCACCGGTGTTTGCAA
CAAGCAAAAAATGGAAATATGGAAAGCACAATTTAGTCCCATTGACCAAA
ATCTTTACCTAAAAATTATTTAATCTCAATTGTAAATTTAGTCCCATTGA
CCTACCTTAAGGGGACCCTATAAATTGACCTTTGTATGTTAGCTCATTTG
TTGGTCAGCCTGCTAGGAGTTTTTCTCGGGACTGCCTCATATGTTTATTT
TTATTTTTAGGCTGGCCGTTTGGATACTGATCTTCCAAAAGTATCTGCAC
ACAGAGAATACATTTTGGACATAAAATGGAACCCTTTTGATGATAGTATG
CTAGCTACAAGTTGTGAAGATGGAAGCATTAGGTTATGGCAGTTTTCAGA
TCATGGTTTACTGAGCAACATAGATGAGTCTAAAGCACTTTTAACCTTCC
AATTGCATCAAAGAAGATGCACACAAATTAGTTGGCATCCAATAGTAGAA
AATGTTTTAATGAGTGTATCTCAAGAACCTCAGATAGCAATATGGAACCT
TGATAATGGCGAAGCAGAGAGAGTTATTAATGCACCTAAAGTAATACATT
TCGCTGAATGGAGTATCAAAGGTGACAAGATTGTGACCACAGACAAAGAA
AAGATGATTCGAATCTATGATGCAAGATCTGGAGAAGAACTTATGGTAAG
CTCAAGTTTAGTTGTGACAAAAATAGTAAATATGCACACATGAGTACTCT
TAGGTTCCAAATAAACGTTGTTGGAAATTGTACTTCTGAAAACCCAAAAA
TAAGGTAAATATAGGCTAAAATCATGCTTTTTGGAGCAAAATAAGGGGAC
TTCTTTTTGCCCTGTTTTGCCAACTGAAAATATTCTTAAAAATTAATAAA
CGGGGGTTTGGAAAATTTTCGAAAAATTAACAAGCGAGGGGGCCGTTTAT
TTGGAAACTACGAGTAAATTATATACTTCTGATTTATAAAAAATACATTA
AACAAATATTGATTCATCATCAGTTCACTTGTTTTTGTAGAGCTGCAAAG
GACATGAAGGACAGAAACCCCAACGTGTTGTATTCACCTTTGATGATACC
ATGCTTTTCTCCTGTGGTTTCTCCAAAATGAGTGAAAGACAATATGCAGC
ATGGAGTGTCACTGATGTAAGTAACTATGTTTTAATGCTCTAATGTTTTT
GTTTTAAATACAAATATCCAAAAGCTGGCTCGGAAATGCTTAGATCGAGA
GATTTACAAAGCTGAATTATATGTGTTGAAGGATGATTATACCCTAAGCA
AAATTTTAGAGAAATTCCGAAAATCCAGCCAAAAACAAACATTTTCCCTT
TGAAAGAGTAGGATAAACTTTAATTAGATATGTCGTTTATTAAATCTTTG
TCATTGTATCAAAGTTATGCTAAAATAAATTTATAATCATTTTCGGAAAA
TGTTCAAAACCGTCAAAATGGATCTAACAAATTTCTATTAAACAGGTACA
GTGAATTATTGCCTTTAGCCTGGTTAAAATCTTTTAATTGAAGTAACAGC
AGAAAATCTTGAAAATATCTCTTGAAGGCCTCATAAATGCATTATTATTA
CTTACTGTACTAGAATTCGATCTTATTTTCCGCAAAAGACTCTTNTTAAA
ATCTTTTAATTGAAGTAACAGCAAAAAATCTTGAAAATATCTCTTGAAGG
CCTCATAAATGCATTATTATTACTTACTGTACTAGAATTCGATCTTATTT
TCCGCAAAAGACTCTTGAAATGTTATGATTTTAGAATTTCTGCTTGAGTA
CCATGTATTTTGGGTTTTNTGAAATGTTATGATTTTAGAATTTCTGCTTG
AGTACCATGTATTTTGGGTTTTTGAGAAAAAAATTTTTGTCTTCTATAAG
GAGCACGAATCCGTTAGTGGATGCCAGCAGCCTAGACATTTTATTTCTTT
TCATTTCTTTCAGAAAATTAAACAATTGGACATAGGTGAGCTGGATTCAT
CAAACGGTACACTCAACCCAATCTACGATCCAGATACACAAATGGTCTAT
GTTGTTGCAAAGGTAATTTATGTCAAATTGGGATGAATGTTAAGGAGCCC
GATTTCTAAAAAGATTTTGCTCACCAAATTCGGAAATTTCCCGAAAAAAA
GCGGCTTTTCTCTCGATTTCATCATTATTTATTCTGATCTTTTGTAGAGA
ATGTGTAACTAAAGTCTGCCTCAAAATAATTTGCAGATGAGACAAAAACG
ACTGTAACTTTTGTTAAAATTTGAATCAAGTTGCGATTTTGTGCTTGTTC
AAAAGATATTTGGAGTGAAATATTATCAAGTAAAAAAATTTGGAAAAAAA
AAGAAAAATAAAAATGAAAAATGAAGAAGAAAAAAATCAAAAATGTGGTA
AATTACCATTTTCACCAGTTTTCACTGGAGTGATTCTTCAATCTTAGACA
GTCTTAGATCGTCATCACTGACTGTGAANCAAAAATGTGGTAAATTACCA
TTTTCACCAGTTTTCACTGGAGTGATTCTTCAATCTTAGACAGTCTTAGA
TCGTCATCACTGACTGTGAAATTTTTTTTCAAAAATACCAAAAATATTCA
TTCAATCAAAAGATATCAAACAAAGTTTATTACTGGTTGACTCTATAAAG
TAGTAGAAAACGACAAAAAAATAGCCTTTTGTCGATCAACCAATAACTAA
CTTTGTTTGATATCTTTTGATTGAATGAATTTTTTTATTTACAGTGATGA
TGATTGAAGAATCACTCTTGTGAAAATGGTAATTATACCACATTTCTACA
AGAAGTGGATTTTTTTCTTTTTCATTTTTCGTTTTCATTTTTTTTTTTTC
AAGTTTTTTTTCTTGATAATATTCCACTCACAAATATCTTTTCAACGAGC
ACAAAATCGCAACTTGATTCAAAATCTATCAAAAGTTACAGCCATTTTTG
TATCAGCTGCAAATTATTTTGAGAAAGACTTTAGTATCTACTGCAATCAA
TGATTTGAAAACGTTTCTATAGAACCGGGAATGGCCCTTTTTTGTATTGC
TGTGACAATTTTTCTTTACATCTAGAAACGTTGGTTTATTTTGCATTTAA
TGCTTGTTTCTAAACATGAGACTTATTTTTTGTATTCAGGGTGATTCTGT
GATCAGGTACTACGAGCTTGTGAAGGAAGATCCATACTTCCATTACATCA
CCACTTTCCAGAGTAAGGACGTACAAAAAGGTTTCACCACCATCCCGAAG
CGATGTGTAGATGTCAACTCATGTGAGGTCATGAAGTTCTACAAAATTGT
CGCTGGCTCAGGAAACAAACCAGCCTTGATCAAACCAATCTCTTTCACTG
TCCCCAGAAAGGTAAAACCTTGTCGTTGTATAGTGTTAAACGTAATGAGC
ACCAAAAGGGTTCCATTCTAATAGAATTCCTTGAAACAAAAAATAAGGCT
TTTGTAGCGTGACTCTGAACATGTTAAATGTGTGACAGGTTCTTTAAGTG
GGCACTCAGCCTCAAAGATGTCTACATTTCTCTTGGCTAACTAGACATTC
ACAAACAGCGAAATTCCATTTGAAAAACAATAAAATAAAATGAAATCCTT
GCTCACTAGAGTGAATTATACCAAGATGATTTGTACCCGGACGCTATTTC
GAATGAAAGCTCATGTGATGAACCATCTGAATGGTTCAGCGGAACCAACT
TTGAGCCTAAACGTATAAGCATGTCGCAATTCTTCAAAGGTGCGGTCACT
CCATCCAGCAGTGCTGGTGGTGGCCTGAAAAAGGGTGGTTTGAAAGGATT
GAAAGCCAAGAAAGAATCGAAGGCAGCTGGTAAGCCTGCAGCTGCACCTT
CCCCGACTCCGTCGGAAGAAAAATCGAGCCCAACAGTAAGTATATTTTTC
GTAAAAACAGCAAGGTTATTTACTAAACTGCTCTAGTAGCCTTGCATCAA
TCAGCTGTATTTACAGAACAGGGGGGGAGGGGTCGGTACTAAAATCTTGG
ACATATATATGAGTACTAAAGTCTACTCACGATAAGTGGATTCAAATTTC
ACGGAAAAAACTAACAGTAAATTAATAAGCTCCTTCCTACCTTCCCAACG
ATACCAAACTTTTTAAGATTGAAGCTGGGATTGAAGCATTGGTTGAAAAA
TAACAAGCAAAGCAAAATTTATTGCACACTTATCGTGAATAGACTTTAAG
AGGCTTTTAAAGATTTTTTTGCACCCATTTTAGAGAAATGGTATTTTAGT
AACCATGTACTAAACTTTTTGAGGACATTTTGACACAGAGACCACCCAAT
TTTGCTCTTCTCAGGGTAAATTCTGCTTTCATGGGACCATTTTTCTGATT
TTTGCAACACAATTTTTCTTTTTTGCAAAGATTAAAGACATTTGACTTGA
TGCAAAAATGATTAAATTCTGGAAACTTTCTTTAATTGAAAAAGATTAAA
ATTTTCTTTTGAAAAATTATGAAAAGATTTCTGAAAATCACTATTTTAGT
ATAAATGTACTTTTGAATTTCTTAACTTTTAGTCTGGATACCACTTTTTT
GGTATTTTAGTACCCTCACTTCAAACTTGTACACTTTTTTCTGAAACACT
CGGTAGTTTTACAAATTTTGGAGTGACTTCGAAAAGAAATATACTAGTTT
TACTTATCATTGAGCATATTGACATAAGGACAGTGTCTGCCTATTGTTAT
ATTGTGCTGATATAAGCAAACAAAGCTTGTGAATTGATATTGATGAGTAA
GCAAACGATATCACTCTTATTTAAAAACAAAACCTTTAAAGTTTCCGGAT
TTTCCTTACGACCTGTGGGCAACGTCAAAATTTTCATAAACCTTTCATTA
TAAACTGTTCATATGGCTTTAAATTGTCCTGTATTTTGGTCAAAATCTAT
CCTATCTTACTAATCAATTTGTCTACTTATTGGCTTGAAACCATGACATT
TTGTGGTATTTTTCTTTTTTCGGCCTTAAGACAAATGTGCTAGGATTGAA
TCTTACAGTCTGTGCCACTAACTCGATTGGGAAGATTCTTCCGAAATGGG
AAGAACCTTCCCGAACGAGAAGAATTTACTCTAATTTTTTCTGCCCGTTT
GGGAAGATTCTTCCTCTTTGGGAAGTTGAAAATTGACTGAATCTTCGGCG
ATGCGGTACGATGACCGGCGAAAATTGAAACTTTTTGGAGGTGAAAAAGC
ATCAAATTTTAAAGTTTTTTACCGAAAGAAAAGTAAACTTTATCGTAGAA
ATCTTGTTTAATTGTGAAAAAACTGCGTAAACTTCCCAAACGGGAAATTC
CAACCCGATCGATTTTTCCTTATTTTCCCGCTTCTTCCCGATCTGGAAGT
CTATTTTTTAACTCTTACCCGTTTGGGTGTCAAGTTAAATTCCCGTTCGG
AATGGTTCTTCCCATTTTAGAAGAATCTTCCCATTTCGGAAGAATCTTCT
CGATCGAGTTAGTGGCACAGACNACTCTTACCCGTTTGGGTGTCAAGTTA
AATTCCCATTTTGGAAGAATCTTCCCATTTCGGATGAATCTTCTCGATCG
AGTTAGTGGCACAGACTGTCTTAAGGGCTCTGATCATAGTCAAAAAATTT
GTTAAAGGGATATTACAGTAGTAAAATGTAAACATTGCGCGAACCACGTG
TCATTAAAGAGAACGATTAAAATCACGTGTCCAAAACAAACTTGTAAAAC
AATTGAACAATCAAAATTAGCCATATTTGGTTTAGTTTTTTTATTTTGAC
ATGTGACATTTGTTTTGATTTTGTAGCCGCTGTATACAGTTTGTTTACAA
AGAGAGATATGAAGATAAAACTTTTGTTTTGGGTTCCTTGACACTTTTAA
CAAAATACTGCCTTTACAAGTTGTTTGGAAATTTGTTCAGTCAAGAGTAA
TTAAGAATTGAATTACAAAAATGACGTTATGAACTTTAAAAAGACATTAA
TAAAATGTTATATTACCCTCTTTTACAAAAAATGCTAAGTTTCAATGGGT
AATTAACGTTTTTCTTTCGAAATGCTTTTAAATTGTCCGTAAAGGATTGA
ACTATTTTAAATTTTTCGGAAAATTTTCTTAATTGATGTATCAATTTTAC
GAAAAATCAAAAACCACTATTTTTAAGATTTTGAGACATGGAAACTTTTA
CAAAAAATTTCCGAAAATTTATTTTAGTTTGGTTAGAAATACACCTTAAT
AACGCAAAAAAAAAATTCAAAATATTTTTTCTTCGCCGAAAATAAGGTCT
TCAAAGTTGAAATACTCTTCTTCGCAAAAATCTTCATTTTCTTCCTCATC
AAATTTTTTCATTGCGATTTTTAGATTTTTAGATTCAGGAATAATTGGTA
AATTCACTATGATCAGAGCCCTTAAGCTTTCCCAGGTTTTAAAAGTACAA
ACATGGCTCATTAAGGCAAAACCTCCGTTTTGGGGGCCATATATTGTACT
AACCAATTTGTCTACTTATTGGCTTGAATCCATGAAAGATATACCGAAGC
TAAATTATGTTTTTCTTCTTTCAGCCGGTTGCTAAATCTGCACCAGTATC
TTCAGCTCCTTCCGCCTCCTCGCCCGCGCCCTCCTCTGGCGGTGTTGACA
AAGATTACGTTGCCGGTCTTGAGAAAGAGATCAAAGGTCTAAAGGTGAGT
AATAAAGAGATGGAGAAAGAAATCAAATCATTGAACGACAAACTTAAGGA
CTTTGATAAGTTGTCAGGTGATGTGAAATTACTTTGTGATGCTGTCAAGA
AGAATAACGAACGCTTGACTTCACTAGAAGCTCTCGTCGAAGAGGGAGAC
GACGAGGAATAGACGATTATCCGCTCCCCGATCACAATGCTTTCACCATT
TACGGGGTGGATAACGAAAATACTTGAGCTCGTTTGCTTCGAACATCACA
TGCGTTGAACTGTAAAATGAACCAAACAAACAAAACGAAAAAGGGGTTTT
AGAAAGTTAAAAACAAATTAGTAAGTGATTCAAATTCAAATTAATTAAAT
ACGTAATGGTGTTTTATAATTTTAAATTCGATTCCTTTTTCCCTCGTAAC
ATTTTTTTTTTTGATTAAATGGAAACTTTATGGATTATTCCTGATTATTC
TCTGAAAATTTTGTTATTTTTTTTTTCTTGTAAATTTTAATTTTTTTTTC
TTAAAATTTCGTATCCTTTACTGTTAGTTTTGTCATTTTTTAAGAAATCT
TTTTATAGAACTAGGACTTGCTGACTTTTTTTCTAGATTTAGTGGCTTGT
GAGAATGGCAAATTTCCCGCTTCCCGTTGCTTTCCACGAATAAATGATTT
TTACTCATGACTATAATGACGTATTATGTAGATAGATTTGCATTGTAGTA
ATTTTTCTGTAATAATATCTTTTGTTCTATCTAAAAGGAGATGAAATAAT
GAATGATTAGGTGGTACACATTATCCAAAATTAAAGTTTTATTATTACAC
GCCCGTAAATTATTTCCTAACTTTTAACTAATTGTAAAATCAATTTGCAT
GGAAGACGCATACAGCCAATTTTACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036730XLOC_036730Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058317-exon-scaffold_309-1575043694:807372..807846TCONS_00058317-exon-scaffold_309-1575043694:807372..807846Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:804502..804936TCONS_00058317-exon-scaffold_309-1575043694:804502..804936Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:804031..804156TCONS_00058317-exon-scaffold_309-1575043694:804031..804156Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:803135..803233TCONS_00058317-exon-scaffold_309-1575043694:803135..803233Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:801836..802057TCONS_00058317-exon-scaffold_309-1575043694:801836..802057Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:801312..801587TCONS_00058317-exon-scaffold_309-1575043694:801312..801587Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1575043694:797670..798672TCONS_00058317-exon-scaffold_309-1575043694:797670..798672Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:807372..807846TCONS_00058317-exon-scaffold_309-1510915933:807372..807846Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:804502..804936TCONS_00058317-exon-scaffold_309-1510915933:804502..804936Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:804031..804156TCONS_00058317-exon-scaffold_309-1510915933:804031..804156Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:803135..803233TCONS_00058317-exon-scaffold_309-1510915933:803135..803233Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:801836..802057TCONS_00058317-exon-scaffold_309-1510915933:801836..802057Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:801312..801587TCONS_00058317-exon-scaffold_309-1510915933:801312..801587Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1510915933:797670..798672TCONS_00058317-exon-scaffold_309-1510915933:797670..798672Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:807372..807846TCONS_00058317-exon-scaffold_309-1491911889:807372..807846Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:804502..804936TCONS_00058317-exon-scaffold_309-1491911889:804502..804936Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:804031..804156TCONS_00058317-exon-scaffold_309-1491911889:804031..804156Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:803135..803233TCONS_00058317-exon-scaffold_309-1491911889:803135..803233Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:801836..802057TCONS_00058317-exon-scaffold_309-1491911889:801836..802057Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:801312..801587TCONS_00058317-exon-scaffold_309-1491911889:801312..801587Clytia hemisphaericaexon
TCONS_00058317-exon-scaffold_309-1491911889:797670..798672TCONS_00058317-exon-scaffold_309-1491911889:797670..798672Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:797670..807846 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
121.357	116.037	133.841	124.918	157.125	91.3779	203.993	200.587	108.112	126.262	109.29	81.4337	126.795	110.674	130.238	143.786	104.566	115.135	95.4665	106.161	102.894	120.46	108.52	103.173	61.2827	79.1549	250.226	266.822	293.199	287.471
Blast
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BLAST of TCONS_00058317 vs. Swiss-Prot (Human)
Match: CORO6 (Coronin-6 OS=Homo sapiens GN=CORO6 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 5.403e-106
Identity = 171/397 (43.07%), Postives = 245/397 (61.71%), Query Frame = 2 
Query:  290 IVRKSKFRNTYGTEVKKEFWYENIRPSNCAFDGTFIACNGKFVAFCVEVGGAGAFTVIPVSKAGRLDTDLPKVSAHREYILDIKWNPFDDSMLATSCEDGSIRLWQFSDHGLLSNIDESKALLTFQLHQRRCTQISWHPIVENVLMSVSQEPQIAIWNLDNGEAERVIN--APKVIHFAEWSIKGDKIVTTDKEKMIRIYDARSGEELM-SCKGHEGQKPQRVVFTFDDTMLFSCGFSKMSERQYAAWSVTDKIKQLDIGELDSSNGTLNPIYDPDTQMVYVVAKGDSVIRYYELVKEDPYFHYITTFQSKDVQKGFTTIPKRCVDVNSCEVMKFYKIVAGSGNKPALIKPISFTVPRKSELYQDDLYPDAISNESSCDEPSEWFSGTNFEPKRISM 1471
            +VR+SKFR+ +G   K +  YE+IR S   +D +F A N KF+A  VE GG GAF V+P++K GR+D + P V+ H   +LDI W P +D+++A++ +D +I +WQ  D+  + NI E   ++T + H +R   +SWHP   NVL+S   +  I IWN+  GE    ++   P VIH   W+  G  + TT K+K +RI D R G+ +    + HEG +P R VFT D  +L S GFS+MSERQ A W   +  + + + E+D+SNG L P YDPD+ +VY+  KGDS IRY+E+  E P+ HY+ TF SK+ Q+G   +PKR +DV+ CE+ +FYK+           +PI  TVPRKS+L+QDDLYPD    E +  E  EW SG + EP  IS+
Sbjct:    5 VVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITE--PIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKGQVVAEQARPHEGARPLRAVFTADGKLL-STGFSRMSERQLALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK------CEPIIMTVPRKSDLFQDDLYPDTPGPEPAL-EADEWLSGQDAEPVLISL 391
The following BLAST results are available for this feature:
BLAST of TCONS_00058317 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CORO65.403e-10643.07Coronin-6 OS=Homo sapiens GN=CORO6 PE=1 SV=2[more]
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