TCONS_00058314 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058314
Unique NameTCONS_00058314
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058314 ID=TCONS_00058314|Name=TCONS_00058314|organism=Clytia hemisphaerica|type=transcript|length=1687bp
ACTGACCATAACTAAAGGTGTCACTAGCGTCCAGTTTTTCCCGATGCCGG
TAACCTCAGATTATCAATACATTATCTGGAGGTGGGAATCATCTGACATC
GACTTCATTTTTGGTGTGTGGCGTGGTACCCTGAATTCTTCATAAACTTC
CCTTAATATATAGTTTTACGAAACATGTCTGGCATcgtgagaaaatcaaa
atttaggaaCACTTATGGTACTGAAGTTAAAAAGGAATTTTGGTATGAGA
ATATACGTCCCTCAAATTGTGCATTCGATGGAACATTCATAGCTTGCAAT
GGGAAATTTGTTGCTTTCTGTGTGGAAGTTGGCGGAGCAGGGGCTTTTAC
CGTCATACCTGTTTCAAAGgctGGCCGTTTGGATACTGATCTTCCAAAAG
TATCTGCACACAGAGAATACATTTTGGACATAAAATGGAACCCTTTTGAT
GATAGTATGCTAGCTACAAGTTGTGAAGATGGAAGCATTAGGTTATGGCA
GTTTTCAGATCATGGTTTACTGAGCAACATAGATGAGTCTAAAGCACTTT
TAACCTTCCAATTGCATCAAAGAAGATGCACACAAATTAGTTGGCATCCA
ATAgtagaaaatgttttaatgaGTGTATCTCAAGAACCTCAGATAGCAAT
ATGGAACCTTGATAATGGCGAAGCAGAGAGAGTTATTAATGCACCTAAAG
TAATACATTTCGCTGAATGGAGTATCAAAGGTGACAAGATTGTGACCACA
GACAAAGAAAAGATGATTCGAATCTATGATGCAAGATCTGGAGAAGAACT
TATGAGCTGCAAAGGACATGAAGGACAGAAACCCCAACGTGTTGTATTCA
CCTTTGATGATACCATGCTTTTCTCCTGTGGTTTCTCCAAAATGAGTGAA
AGACAATATGCAGCATGGAGTGTCACTGATaaaattaaACAATTGGACAT
AGGTGAGCTGGATTCATCAAACGGTACACTCAACCCAATCTACGATCCAG
ATACACAAATGGTCTATGTTGTTGCAAAGGGTGATTCTGTGATCAGGTAC
TACGAGCTTGTGAAGGAAGATCCATACTTCCATTACATCACCACTTTCCA
GAGTAAGGACGTACAAAAAGGTTTCACCACCATCCCGAAGCGATGTGTAG
ATGTCAACTCATGTGAGGTCATGAAGTTCTACAAAATTGTCGCTGGCTCA
GGAAACAAACCAGCCTTGATCAAACCAATCTCTTTCACTGTCCCCAGAAA
GAGTGAATTATACCAAGATGATTTGTACCCGGACGCTATTTCGAATGAAA
GCTCATGTGATGAACCATCTGAATGGTTCAGCGGAACCAACTTTGAGCCT
AAACGTATAAGCATGTCGCAATTCTTCAAAGGTGCGGTCACTCCATCCAG
CAGTGCTGGTGGTGGCCTGAAAAAGGGTGGTTTGAAAGGATTGAAAGCCA
AGAAAGAATCGAAGGCAGCTGGTAAGCCTGCAGCTGCACCTTCCCCGACT
CCGTCGGAAGAAAAATCGAGCCCAACAcCGGTTGCTAAATCTGCACCAGT
ATCTTCAGCTCCTTCCGCCTCCTCGCCCGCGCCCTCCTCTGGCGGTGTTG
ACAAAGATTACGTTGCCGGTCTTGAGAAAGAGATCAAAGGTCTAAAGtga
tgatggtcaaagattgaagaaccattcctgtgaaaat
Run BLAST on NCBI

transcript from alignment at scaffold_309:796739..807740-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058314 ID=TCONS_00058314|Name=TCONS_00058314|organism=Clytia hemisphaerica|type=transcript|length=11002bp|location=Sequence derived from alignment at scaffold_309:796739..807740- (Clytia hemisphaerica)
ACTGACCATAACTAAAGGTGTCACTAGCGTCCAGTTTTTCCCGATGCCGG
TAACCTCAGATTATCAATACATTATCTGGAGGTGGGAATCATCTGACATC
GACTTCATTTTTGGTGTGTGGCGTGGTACCCTGAATTCTTCATAAACTTC
CCTTAATATATAGTTTTACGAAACATGTCTGGCATCGTGAGAAAATCAAA
ATTTAGGAACACTTATGGTACTGAAGTTAAAAAGGAATTTTGGTATGAGA
ATATACGTCCCTCAAATTGTGCATTCGATGGAACATTCATAGCTTGCAAT
GGGAAATTTGTTGCTTTCTGTGTGGAAGTTGGCGGAGCAGGGGCTTTTAC
CGTCATACCTGTTTCAAAGGTGAGATTTACTTGTATGTTTCATAGAAAAT
GAAAAAATTTCTTCAGATTTCAACCACAGCAAATGATCAATATTTGGCTG
GCAAAAGTTTCATTTTCTACCTTATTGTGTTGTTATAACCCAGTCCCAGA
TAGAAGTCAATCAAACTGTACCATTACTGAAATTTATTGAACGTCTGAGA
AATTCTGGTAAAGTTCTATAACTTTTCAATATATGTTCAATCGCAATACA
CTGTTTTTAGGAGTCTCCCTATATCTCGTACTTTTACCTACTGTTTTTTA
CGGGTGGAGAGTGAAGTTTCCCGCAGTCGCTAAAATTAAAACAATGGAAA
ATTGTTTGGACGCTTGCGCAGTCAACACTCCTAAACAGTGTAATCCACGC
GTTTGATTTTGATAACTGTAGAACAGATAGGCTATTTCATTGTGACATCC
ATCCATACTCATTTTGTCACAGCAAATGTCAATATGACGTTAGGGGGGTA
GGGGTTTTTTACCTTGATGTTTTTTTCTGTGGTAAAATGTTGCCACTCTT
CCAGTTAGCCCGTTAGTCACATTAGAAAATCAAGCTTTCAGAAAAAATAA
CATCCATCATCTACACACAGTCTGGGAAATCCTCTCAATCAATTGCACGC
TTATGCTCGAGGCCGTAAGCCCGCAATTGCACGGTTATCAAAATGGCAGA
ATTTTTAAGCGTGTAATTACACGCTTATCAAAATTGTTCTGAAACGGGTG
GTAAGCGGTAAGCGTGCAATTGCACCCTTTATTATTCTGACACGCAATTC
CTTCCGAAAGCTCTGTTGAATTTCAAAAGCTTAGGGCAGTTTTACTCAAA
ATTTATCGTAGAAGAAGATTCCGTAAAAATGGATTGCCCGTTAAACCATG
CCTTTGGCCGAATTAGAGAATTCTGAACCCCTTGAAATCCCTAAGCAATT
TCAACCAGGGCGGGAGCGGGCTATTTATGACCATGCAATTGCGCGCTTAC
GCCTTCGGAACATAAGCGTGCAATTGAGAGGATTTCNCGGCCGAATTAGA
GAATTCTGAACCCCTTGAAATCCCTAAGCAATTTCAACCAGGGCGGGAGC
GGGCTATTTATAACCATGCAATTGCGCGCTTACGCCTTCGGAACATAAGC
GTGCAATTGAGAGGATTTCCCAGACTGACACAGGATGTATTTGCAACAAC
AAGGATGAGAATTACCTGAATCTCAAGTTCCCAAGACAATTAATTAAAAC
TTGAAAACTTAAAATGAGACAAAATGACCGATTGCAAACGTGCAGCAGCC
ACAATATCAACCAACCAAATTTTGTCATTCAATTCCCAAGAATTTTTAAG
GCCTTGTTTATATGCTGAAGTAAAAATAGTTTCTCACATGTACATGGGTC
AGTGTTTGAGGTCCAGCAAAATTTCCAGGAAATAGGTGGGTTATGTCTCC
CTCGTAGATCTTTTTCTTGGGAAGTTGATCTTCAAATTAATTTTCAAGAT
TGGCTTAGCTCAAATTTTTTCATCCATGGCTCAAATTTTAGGCAATTTCT
CATAGTTTTTGAAAATGTTAATTTCATTAAAAAGCGCTGGGTTAATTTTC
CCTTTTAAGAGCCCCTTTAGAAGTTTTGCGGTGCAATTTTTTGCTTGGAA
GTTAAGTAAACGATTAGTGCTTTCGCAGCATTTATCTTTGATACGCATTT
CGGCGGGATGCTAGTGTGACTAATTGTCTGCAAAATATATTGGGTGAATA
ATAATAATTTTCGCAACTATGACTTTAATCGTTTCCTTGTTGAATATCTC
CTTTGCAGTATTTCATTTTATTTTTGCTTTCCCGTCTCATGTTTGGAGTG
ATTAGTCTACTACAAATTTGTAGATTTGGGGGATTTGGAACATTTTCTAT
GTTTTTTTTTTGCGCAAACCCCTGTAACTATGGGTAAGCACCTCATTGCT
AAGATGTTGGCTTAAAATCGAAAATGCAACCCAGACTCAGGGGGGGGGGC
GGTAGTAAAATCTCAAACATAATGACGTTTACTACGGTGGTGGTAAAAAA
TTTTACTACCCAGGGTAGTTAAATACTAAAATGGGTGGTATATATGTGTT
AAATGTTGGAAAAATTTCACTACCTGGGTAGTAAAAACTGGTAAATTAGC
AAATTTTGTCACCCCTAATTAAGGGGGATTAATTTTTTGTTGGTTTCCAA
ACTACCGTAACTTTGTGTAATGCCAACATCACCGGTGTTTGCAACAAGCA
AAAAATGGAAATATGGAAAGCACAATTTAGTCCCATTGACCAAAATCTTT
ACCTAAAAATTATTTAATCTCAATTGTAAATTTAGTCCCATTGACCTACC
TTAAGGGGACCCTATAAATTGACCTTTGTATGTTAGCTCATTTGTTGGTC
AGCCTGCTAGGAGTTTTTCTCGGGACTGCCTCATATGTTTATTTTTATTT
TTAGGCTGGCCGTTTGGATACTGATCTTCCAAAAGTATCTGCACACAGAG
AATACATTTTGGACATAAAATGGAACCCTTTTGATGATAGTATGCTAGCT
ACAAGTTGTGAAGATGGAAGCATTAGGTTATGGCAGTTTTCAGATCATGG
TTTACTGAGCAACATAGATGAGTCTAAAGCACTTTTAACCTTCCAATTGC
ATCAAAGAAGATGCACACAAATTAGTTGGCATCCAATAGTAGAAAATGTT
TTAATGAGTGTATCTCAAGAACCTCAGATAGCAATATGGAACCTTGATAA
TGGCGAAGCAGAGAGAGTTATTAATGCACCTAAAGTAATACATTTCGCTG
AATGGAGTATCAAAGGTGACAAGATTGTGACCACAGACAAAGAAAAGATG
ATTCGAATCTATGATGCAAGATCTGGAGAAGAACTTATGGTAAGCTCAAG
TTTAGTTGTGACAAAAATAGTAAATATGCACACATGAGTACTCTTAGGTT
CCAAATAAACGTTGTTGGAAATTGTACTTCTGAAAACCCAAAAATAAGGT
AAATATAGGCTAAAATCATGCTTTTTGGAGCAAAATAAGGGGACTTCTTT
TTGCCCTGTTTTGCCAACTGAAAATATTCTTAAAAATTAATAAACGGGGG
TTTGGAAAATTTTCGAAAAATTAACAAGCGAGGGGGCCGTTTATTTGGAA
ACTACGAGTAAATTATATACTTCTGATTTATAAAAAATACATTAAACAAA
TATTGATTCATCATCAGTTCACTTGTTTTTGTAGAGCTGCAAAGGACATG
AAGGACAGAAACCCCAACGTGTTGTATTCACCTTTGATGATACCATGCTT
TTCTCCTGTGGTTTCTCCAAAATGAGTGAAAGACAATATGCAGCATGGAG
TGTCACTGATGTAAGTAACTATGTTTTAATGCTCTAATGTTTTTGTTTTA
AATACAAATATCCAAAAGCTGGCTCGGAAATGCTTAGATCGAGAGATTTA
CAAAGCTGAATTATATGTGTTGAAGGATGATTATACCCTAAGCAAAATTT
TAGAGAAATTCCGAAAATCCAGCCAAAAACAAACATTTTCCCTTTGAAAG
AGTAGGATAAACTTTAATTAGATATGTCGTTTATTAAATCTTTGTCATTG
TATCAAAGTTATGCTAAAATAAATTTATAATCATTTTCGGAAAATGTTCA
AAACCGTCAAAATGGATCTAACAAATTTCTATTAAACAGGTACAGTGAAT
TATTGCCTTTAGCCTGGTTAAAATCTTTTAATTGAAGTAACAGCAGAAAA
TCTTGAAAATATCTCTTGAAGGCCTCATAAATGCATTATTATTACTTACT
GTACTAGAATTCGATCTTATTTTCCGCAAAAGACTCTTNTTAAAATCTTT
TAATTGAAGTAACAGCAAAAAATCTTGAAAATATCTCTTGAAGGCCTCAT
AAATGCATTATTATTACTTACTGTACTAGAATTCGATCTTATTTTCCGCA
AAAGACTCTTGAAATGTTATGATTTTAGAATTTCTGCTTGAGTACCATGT
ATTTTGGGTTTTNTGAAATGTTATGATTTTAGAATTTCTGCTTGAGTACC
ATGTATTTTGGGTTTTTGAGAAAAAAATTTTTGTCTTCTATAAGGAGCAC
GAATCCGTTAGTGGATGCCAGCAGCCTAGACATTTTATTTCTTTTCATTT
CTTTCAGAAAATTAAACAATTGGACATAGGTGAGCTGGATTCATCAAACG
GTACACTCAACCCAATCTACGATCCAGATACACAAATGGTCTATGTTGTT
GCAAAGGTAATTTATGTCAAATTGGGATGAATGTTAAGGAGCCCGATTTC
TAAAAAGATTTTGCTCACCAAATTCGGAAATTTCCCGAAAAAAAGCGGCT
TTTCTCTCGATTTCATCATTATTTATTCTGATCTTTTGTAGAGAATGTGT
AACTAAAGTCTGCCTCAAAATAATTTGCAGATGAGACAAAAACGACTGTA
ACTTTTGTTAAAATTTGAATCAAGTTGCGATTTTGTGCTTGTTCAAAAGA
TATTTGGAGTGAAATATTATCAAGTAAAAAAATTTGGAAAAAAAAAGAAA
AATAAAAATGAAAAATGAAGAAGAAAAAAATCAAAAATGTGGTAAATTAC
CATTTTCACCAGTTTTCACTGGAGTGATTCTTCAATCTTAGACAGTCTTA
GATCGTCATCACTGACTGTGAANCAAAAATGTGGTAAATTACCATTTTCA
CCAGTTTTCACTGGAGTGATTCTTCAATCTTAGACAGTCTTAGATCGTCA
TCACTGACTGTGAAATTTTTTTTCAAAAATACCAAAAATATTCATTCAAT
CAAAAGATATCAAACAAAGTTTATTACTGGTTGACTCTATAAAGTAGTAG
AAAACGACAAAAAAATAGCCTTTTGTCGATCAACCAATAACTAACTTTGT
TTGATATCTTTTGATTGAATGAATTTTTTTATTTACAGTGATGATGATTG
AAGAATCACTCTTGTGAAAATGGTAATTATACCACATTTCTACAAGAAGT
GGATTTTTTTCTTTTTCATTTTTCGTTTTCATTTTTTTTTTTTCAAGTTT
TTTTTCTTGATAATATTCCACTCACAAATATCTTTTCAACGAGCACAAAA
TCGCAACTTGATTCAAAATCTATCAAAAGTTACAGCCATTTTTGTATCAG
CTGCAAATTATTTTGAGAAAGACTTTAGTATCTACTGCAATCAATGATTT
GAAAACGTTTCTATAGAACCGGGAATGGCCCTTTTTTGTATTGCTGTGAC
AATTTTTCTTTACATCTAGAAACGTTGGTTTATTTTGCATTTAATGCTTG
TTTCTAAACATGAGACTTATTTTTTGTATTCAGGGTGATTCTGTGATCAG
GTACTACGAGCTTGTGAAGGAAGATCCATACTTCCATTACATCACCACTT
TCCAGAGTAAGGACGTACAAAAAGGTTTCACCACCATCCCGAAGCGATGT
GTAGATGTCAACTCATGTGAGGTCATGAAGTTCTACAAAATTGTCGCTGG
CTCAGGAAACAAACCAGCCTTGATCAAACCAATCTCTTTCACTGTCCCCA
GAAAGGTAAAACCTTGTCGTTGTATAGTGTTAAACGTAATGAGCACCAAA
AGGGTTCCATTCTAATAGAATTCCTTGAAACAAAAAATAAGGCTTTTGTA
GCGTGACTCTGAACATGTTAAATGTGTGACAGGTTCTTTAAGTGGGCACT
CAGCCTCAAAGATGTCTACATTTCTCTTGGCTAACTAGACATTCACAAAC
AGCGAAATTCCATTTGAAAAACAATAAAATAAAATGAAATCCTTGCTCAC
TAGAGTGAATTATACCAAGATGATTTGTACCCGGACGCTATTTCGAATGA
AAGCTCATGTGATGAACCATCTGAATGGTTCAGCGGAACCAACTTTGAGC
CTAAACGTATAAGCATGTCGCAATTCTTCAAAGGTGCGGTCACTCCATCC
AGCAGTGCTGGTGGTGGCCTGAAAAAGGGTGGTTTGAAAGGATTGAAAGC
CAAGAAAGAATCGAAGGCAGCTGGTAAGCCTGCAGCTGCACCTTCCCCGA
CTCCGTCGGAAGAAAAATCGAGCCCAACAGTAAGTATATTTTTCGTAAAA
ACAGCAAGGTTATTTACTAAACTGCTCTAGTAGCCTTGCATCAATCAGCT
GTATTTACAGAACAGGGGGGGAGGGGTCGGTACTAAAATCTTGGACATAT
ATATGAGTACTAAAGTCTACTCACGATAAGTGGATTCAAATTTCACGGAA
AAAACTAACAGTAAATTAATAAGCTCCTTCCTACCTTCCCAACGATACCA
AACTTTTTAAGATTGAAGCTGGGATTGAAGCATTGGTTGAAAAATAACAA
GCAAAGCAAAATTTATTGCACACTTATCGTGAATAGACTTTAAGAGGCTT
TTAAAGATTTTTTTGCACCCATTTTAGAGAAATGGTATTTTAGTAACCAT
GTACTAAACTTTTTGAGGACATTTTGACACAGAGACCACCCAATTTTGCT
CTTCTCAGGGTAAATTCTGCTTTCATGGGACCATTTTTCTGATTTTTGCA
ACACAATTTTTCTTTTTTGCAAAGATTAAAGACATTTGACTTGATGCAAA
AATGATTAAATTCTGGAAACTTTCTTTAATTGAAAAAGATTAAAATTTTC
TTTTGAAAAATTATGAAAAGATTTCTGAAAATCACTATTTTAGTATAAAT
GTACTTTTGAATTTCTTAACTTTTAGTCTGGATACCACTTTTTTGGTATT
TTAGTACCCTCACTTCAAACTTGTACACTTTTTTCTGAAACACTCGGTAG
TTTTACAAATTTTGGAGTGACTTCGAAAAGAAATATACTAGTTTTACTTA
TCATTGAGCATATTGACATAAGGACAGTGTCTGCCTATTGTTATATTGTG
CTGATATAAGCAAACAAAGCTTGTGAATTGATATTGATGAGTAAGCAAAC
GATATCACTCTTATTTAAAAACAAAACCTTTAAAGTTTCCGGATTTTCCT
TACGACCTGTGGGCAACGTCAAAATTTTCATAAACCTTTCATTATAAACT
GTTCATATGGCTTTAAATTGTCCTGTATTTTGGTCAAAATCTATCCTATC
TTACTAATCAATTTGTCTACTTATTGGCTTGAAACCATGACATTTTGTGG
TATTTTTCTTTTTTCGGCCTTAAGACAAATGTGCTAGGATTGAATCTTAC
AGTCTGTGCCACTAACTCGATTGGGAAGATTCTTCCGAAATGGGAAGAAC
CTTCCCGAACGAGAAGAATTTACTCTAATTTTTTCTGCCCGTTTGGGAAG
ATTCTTCCTCTTTGGGAAGTTGAAAATTGACTGAATCTTCGGCGATGCGG
TACGATGACCGGCGAAAATTGAAACTTTTTGGAGGTGAAAAAGCATCAAA
TTTTAAAGTTTTTTACCGAAAGAAAAGTAAACTTTATCGTAGAAATCTTG
TTTAATTGTGAAAAAACTGCGTAAACTTCCCAAACGGGAAATTCCAACCC
GATCGATTTTTCCTTATTTTCCCGCTTCTTCCCGATCTGGAAGTCTATTT
TTTAACTCTTACCCGTTTGGGTGTCAAGTTAAATTCCCGTTCGGAATGGT
TCTTCCCATTTTAGAAGAATCTTCCCATTTCGGAAGAATCTTCTCGATCG
AGTTAGTGGCACAGACNACTCTTACCCGTTTGGGTGTCAAGTTAAATTCC
CATTTTGGAAGAATCTTCCCATTTCGGATGAATCTTCTCGATCGAGTTAG
TGGCACAGACTGTCTTAAGGGCTCTGATCATAGTCAAAAAATTTGTTAAA
GGGATATTACAGTAGTAAAATGTAAACATTGCGCGAACCACGTGTCATTA
AAGAGAACGATTAAAATCACGTGTCCAAAACAAACTTGTAAAACAATTGA
ACAATCAAAATTAGCCATATTTGGTTTAGTTTTTTTATTTTGACATGTGA
CATTTGTTTTGATTTTGTAGCCGCTGTATACAGTTTGTTTACAAAGAGAG
ATATGAAGATAAAACTTTTGTTTTGGGTTCCTTGACACTTTTAACAAAAT
ACTGCCTTTACAAGTTGTTTGGAAATTTGTTCAGTCAAGAGTAATTAAGA
ATTGAATTACAAAAATGACGTTATGAACTTTAAAAAGACATTAATAAAAT
GTTATATTACCCTCTTTTACAAAAAATGCTAAGTTTCAATGGGTAATTAA
CGTTTTTCTTTCGAAATGCTTTTAAATTGTCCGTAAAGGATTGAACTATT
TTAAATTTTTCGGAAAATTTTCTTAATTGATGTATCAATTTTACGAAAAA
TCAAAAACCACTATTTTTAAGATTTTGAGACATGGAAACTTTTACAAAAA
ATTTCCGAAAATTTATTTTAGTTTGGTTAGAAATACACCTTAATAACGCA
AAAAAAAAATTCAAAATATTTTTTCTTCGCCGAAAATAAGGTCTTCAAAG
TTGAAATACTCTTCTTCGCAAAAATCTTCATTTTCTTCCTCATCAAATTT
TTTCATTGCGATTTTTAGATTTTTAGATTCAGGAATAATTGGTAAATTCA
CTATGATCAGAGCCCTTAAGCTTTCCCAGGTTTTAAAAGTACAAACATGG
CTCATTAAGGCAAAACCTCCGTTTTGGGGGCCATATATTGTACTAACCAA
TTTGTCTACTTATTGGCTTGAATCCATGAAAGATATACCGAAGCTAAATT
ATGTTTTTCTTCTTTCAGCCGGTTGCTAAATCTGCACCAGTATCTTCAGC
TCCTTCCGCCTCCTCGCCCGCGCCCTCCTCTGGCGGTGTTGACAAAGATT
ACGTTGCCGGTCTTGAGAAAGAGATCAAAGGTCTAAAGGTGAGTAATAAA
GAGATGGAGAAAGAAATCAAATCATTGAACGACAAACTTAAGGACTTTGA
TAAGTTGTCAGGTGATGTGAAATTACTTTGTGATGCTGTCAAGAAGAATA
ACGAACGCTTGACTTCACTAGAAGCTCTCGTCGAAGAGGGAGACGACGAG
GAATAGACGATTATCCGCTCCCCGATCACAATGCTTTCACCATTTACGGG
GTGGATAACGAAAATACTTGAGCTCGTTTGCTTCGAACATCACATGCGTT
GAACTGTAAAATGAACCAAACAAACAAAACGAAAAAGGGGTTTTAGAAAG
TTAAAAACAAATTAGTAAGTGATTCAAATTCAAATTAATTAAATACGTAA
TGGTGTTTTATAATTTTAAATTCGATTCCTTTTTCCCTCGTAACATTTTT
TTTTTTGATTAAATGGAAACTTTATGGATTATTCCTGATTATTCTCTGAA
AATTTTGTTATTTTTTTTTTCTTGTAAATTTTAATTTTTTTTTCTTAAAA
TTTCGTATCCTTTACTGTTAGTTTTGTCATTTTTTAAGAAATCTTTTTAT
AGAACTAGGACTTGCTGACTTTTTTTCTAGATTTAGTGGCTTGTGAGAAT
GGCAAATTTCCCGCTTCCCGTTGCTTTCCACGAATAAATGATTTTTACTC
ATGACTATAATGACGTATTATGTAGATAGATTTGCATTGTAGTAATTTTT
CTGTAATAATATCTTTTGTTCTATCTAAAAGGAGATGAAATAATGAATGA
TTAGGTGGTACACATTATCCAAAATTAAAGTTTTATTATTACACGCCCGT
AAATTATTTCCTAACTTTTAACTAATTGTAAAATCAATTTGCATGGAAGA
CGCATACAGCCAATTTTACATAATTCTTTATTGTTTCATTGTATATTTCT
TTTCACATCTCCATTCTCTCGTTTCTCAACTCAACACTCTTTGGCTTGCC
TAAACATGACAATCTTTGAAATCACTAAAAATGTGCTTGTACATCCTTTG
AAACCAGACTTTATCCATCAAACAATCTTCTTTCAATTAAAGACATACGA
TTATTTGTCTGAGACGAGCAATTTAAAAAATGAGCATTATGGAGGAGTGT
ACTTTCCATTCATGTTCCAATAAATCGGATCTCCTCCACATTTTATAAAC
TCCTCGTCTCAGACGATTTTTCCGTCTCAGTATAAATGGAACTATTGAGC
AAATCTAAAGTCATTTTATCTTCGAGCAAAGCATGTTGAATGGGAATTTC
TACAATCATGGTTAAGATCTTTTGAGAATTTAGCTTATTTCCTCGTTTTT
CGAAATTTGGAGAAATTACGACCATAATTGTACATCAGGCACATTTTTTG
CTTAAAGTCTGTCTCAAAATAATTTGCAGCTGAGACAAAAATGGCTTTAA
CTTTTGATAGAATTCGAATCAAGTTGCGATTTTGTGCTCAATGAAAAGAT
ATTTGAGAGTGGAATAATATCAAGCAAAAAAAATTGGAAAATAAAGAAAA
ATGAAGAAAAAAATTAACTTCTTGTAAAAATGTGGTATGATTACTTTTTT
CACAGGAAAGATTCTTCAATCTTTGACCATCATCACTGTGAAAAAAAATT
TCAAAAATATTCATCCAATCAAAAGATATCAGACAAAAATTGCTGGTTGA
TTCTATAAAGTATTAAAAAACGACAAAAACAACAGCCTATTGTCAATCGA
CCAATAACAAACTTTGTGATATCTTTTGATTGAATTAATATTTTTGATTT
TTTTTTTCACAGTGATGATGGTCAAAGATTGAAGAACCATTCCTGTGAAA
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036730XLOC_036730Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058314-exon-scaffold_309-1575043694:807372..807740TCONS_00058314-exon-scaffold_309-1575043694:807372..807740Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:804502..804936TCONS_00058314-exon-scaffold_309-1575043694:804502..804936Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:804031..804156TCONS_00058314-exon-scaffold_309-1575043694:804031..804156Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:803135..803233TCONS_00058314-exon-scaffold_309-1575043694:803135..803233Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:801836..802057TCONS_00058314-exon-scaffold_309-1575043694:801836..802057Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:801312..801587TCONS_00058314-exon-scaffold_309-1575043694:801312..801587Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:798553..798672TCONS_00058314-exon-scaffold_309-1575043694:798553..798672Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1575043694:796739..796778TCONS_00058314-exon-scaffold_309-1575043694:796739..796778Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:807372..807740TCONS_00058314-exon-scaffold_309-1510915933:807372..807740Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:804502..804936TCONS_00058314-exon-scaffold_309-1510915933:804502..804936Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:804031..804156TCONS_00058314-exon-scaffold_309-1510915933:804031..804156Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:803135..803233TCONS_00058314-exon-scaffold_309-1510915933:803135..803233Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:801836..802057TCONS_00058314-exon-scaffold_309-1510915933:801836..802057Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:801312..801587TCONS_00058314-exon-scaffold_309-1510915933:801312..801587Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:798553..798672TCONS_00058314-exon-scaffold_309-1510915933:798553..798672Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1510915933:796739..796778TCONS_00058314-exon-scaffold_309-1510915933:796739..796778Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:807372..807740TCONS_00058314-exon-scaffold_309-1491911889:807372..807740Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:804502..804936TCONS_00058314-exon-scaffold_309-1491911889:804502..804936Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:804031..804156TCONS_00058314-exon-scaffold_309-1491911889:804031..804156Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:803135..803233TCONS_00058314-exon-scaffold_309-1491911889:803135..803233Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:801836..802057TCONS_00058314-exon-scaffold_309-1491911889:801836..802057Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:801312..801587TCONS_00058314-exon-scaffold_309-1491911889:801312..801587Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:798553..798672TCONS_00058314-exon-scaffold_309-1491911889:798553..798672Clytia hemisphaericaexon
TCONS_00058314-exon-scaffold_309-1491911889:796739..796778TCONS_00058314-exon-scaffold_309-1491911889:796739..796778Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:796739..807740 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
215.164	226.212	399.653	384.056	206.958	173.395	237.191	254.451	151.237	192.828	123.8	109.018	219.207	204.938	215.725	252.818	223.994	230.483	161.543	188.17	126.428	157.328	106.005	145.34	133.705	141.548	327.008	308.784	305.106	329.41
Blast
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BLAST of TCONS_00058314 vs. Swiss-Prot (Human)
Match: CORO6 (Coronin-6 OS=Homo sapiens GN=CORO6 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 4.099e-109
Identity = 171/397 (43.07%), Postives = 245/397 (61.71%), Query Frame = 1 
Query:  184 IVRKSKFRNTYGTEVKKEFWYENIRPSNCAFDGTFIACNGKFVAFCVEVGGAGAFTVIPVSKAGRLDTDLPKVSAHREYILDIKWNPFDDSMLATSCEDGSIRLWQFSDHGLLSNIDESKALLTFQLHQRRCTQISWHPIVENVLMSVSQEPQIAIWNLDNGEAERVIN--APKVIHFAEWSIKGDKIVTTDKEKMIRIYDARSGEELM-SCKGHEGQKPQRVVFTFDDTMLFSCGFSKMSERQYAAWSVTDKIKQLDIGELDSSNGTLNPIYDPDTQMVYVVAKGDSVIRYYELVKEDPYFHYITTFQSKDVQKGFTTIPKRCVDVNSCEVMKFYKIVAGSGNKPALIKPISFTVPRKSELYQDDLYPDAISNESSCDEPSEWFSGTNFEPKRISM 1365
            +VR+SKFR+ +G   K +  YE+IR S   +D +F A N KF+A  VE GG GAF V+P++K GR+D + P V+ H   +LDI W P +D+++A++ +D +I +WQ  D+  + NI E   ++T + H +R   +SWHP   NVL+S   +  I IWN+  GE    ++   P VIH   W+  G  + TT K+K +RI D R G+ +    + HEG +P R VFT D  +L S GFS+MSERQ A W   +  + + + E+D+SNG L P YDPD+ +VY+  KGDS IRY+E+  E P+ HY+ TF SK+ Q+G   +PKR +DV+ CE+ +FYK+           +PI  TVPRKS+L+QDDLYPD    E +  E  EW SG + EP  IS+
Sbjct:    5 VVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITE--PIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKGQVVAEQARPHEGARPLRAVFTADGKLL-STGFSRMSERQLALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK------CEPIIMTVPRKSDLFQDDLYPDTPGPEPAL-EADEWLSGQDAEPVLISL 391
The following BLAST results are available for this feature:
BLAST of TCONS_00058314 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CORO64.099e-10943.07Coronin-6 OS=Homo sapiens GN=CORO6 PE=1 SV=2[more]
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