|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058292 ID=TCONS_00058292|Name=TCONS_00058292|organism=Clytia hemisphaerica|type=transcript|length=3080bp
ttttcagaTAGAAAAGTATTACCATAAAAacataattatttaaatttgTA
CTGCTGGTCAGTCAAAAGATTTACAATGAAGCTGGTTTTTGTTGTAGTTT
TTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAACACCACAAT
TACAAGAATATGTTGAAATATATGAATGACATTCACAAAAAATGTCCAAA
TATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGGTCGAAGGT
TGACTGTTATGGAGATAACAGAAAATCCTGGTAAATATGTCCCTTTGAAG
CCTAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTTTTGGGACG
TGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTATTTGGCTA
AGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCCATATTTTG
CCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGTGATTGTTC
AAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAACAGAAATT
TTCCAGATCAGTTCAAGAAGATTCGTAATCAACAGCCAGAAACTGAAGCC
ATTATAAAATGGTTGGATCAATATCCTTTTGTACTATCCGCCAACCTTCA
CGGAGGAAGTTTGGTTGCCAATTACCCTTTCGATGATGATGAGAAGATGA
AAGAAATGTATGCAGCATCACCAgatgatgatgtttttgtcCATATTGCG
AAGAACTACTCTTACGATCACCCAACCATGCATCTCGGAAAGACAAAATG
TGGGGATCACTTCAAAGATGGTATTACGAACGGTGCTAAATGGTACAATG
TAGCAGGTGGCATGCAAGACTACAATTACTTACATGGAAATGCATTTGAA
ATTACTGTTGAGATGGACTGTTGTAAATTTCCTCATGGACAACACCTCAA
AAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATATCAAACTCT
CACATTTGGGGTTGAAAGGAACCGTCAAagACACTTCTGGAAATGGTATT
ACTGGTGCAAAGATTGACGTCAGCTATCCTGATGGTAAAACACGGATACC
CATCCATTCCAGAGATGGTGGTGATTATTACCGATTGCTTTTGAAGGGAA
ATTACAGTGTTACAGTAAGTGTTCATGGCAAAACCTTGACTACACAAGTT
CATGTTGATGGTCTGCCAACGAAGATTGTAGATTTCATTGTCGGTCCTGA
TTCCATTACCGCTCAATCCGTACATGCAGCTGCACCAGCAGTATCTGGAA
ATGTTGCAACTGTAAATGTTCCAGCTGTAAATGTTATGGCTGCTGCAAAT
CCTGTTGATGATATCAAGAAAGAAGTAAAAGAACACCAAGGAAAACCTGT
GAAGTCCTCCAGATCTGATAATGTGGCAGCAGCAGCTGTCATTGTCACCA
TTGGTGTTATCGTTTGCGTTCTGGCTGGTGTTGTTTTGTTCAGAAAAGTG
AAAGATTTGAGGGGTAACGATAACCAAGGTGGCTATGCAAAAATCAATCA
AGAAAAATTTGATACCTATGAGCCGTAGAATATATGTATGTTGGAAttat
tataaataaaaataaaaaaatggggTGCATTTTATTTGATGTTATAAATC
TTTCTGTGGGAAATAATTGGATTAATATTATGCTAATAGAATTTTCCTGT
CAGTTCTCTCGTTGCATTTTGTAAGTTTTATTTGGGTTGGATGCATTAAG
GAAGCTAATACtcattttagattatttcttTCTACTAAAGCTATTTCTTC
AGATCTCTTTAATTTACTTGCCATCTAGCTGCACTCTATAGATTCTTAAA
AGAGAGACTATACTTTATGATAATAATATTTGTTTGTGTAAATAGTCGCG
CTactttgttattttcttttcgtCTGAACTTCAAAAAGCTGGACAGTCTT
TCTGGAAAAAGATCCATTATGTgctaaaagtaaaagaaagaaattttatt
ccCTTGAACCTACATTTTCTGTATAGAAATTTGGAAATCTGTTTGAGGTC
TAAATCCTCTCCTGTCCTGCTGTCCTGACTCTCCAAAAATTCTTCAGTTT
TTATTTATAATGAGCTTATTGGATTTGTTTCTAGAAAGTGTTCAGATGAC
TTAATTGTATCACATATATTTTTTGTACTGTTTGGTTTATACCTCCTCCA
GAAAACTTTctcacaaaactttaaaacagaACAAAGCCTACGTCAcaggt
aaaaaaatttgatttcctgatttttaggGTAATTACCCGGAAAAcgtcaa
aacttttaaaaacgaACCAATCTTTTGAAGCACAAAGATAAAGTCCCTCA
AAGCCAATAATCTCAAAGTTCATTAATAAATCAGAAcctttatttattat
ttttgtatattttcttGTGTTTTAGTTGTATTATTTTCAACTTAgatttt
atgttttgtattGCCACACTactaaaataaagaaatgtaATATGAATTGT
TGTCAAGGGAGATAGAATAATTAAATTctcttttcaaaagtttagtaAGA
TATAATTCCCTTGGGACTGGTTTCCATAGGGTAACAAAAAGGAGTGCATC
CtcgctaccttaattcaaaaaggACCTAAGTCCTTGAAGGGTTAGTTCAA
AAGGGGCGTAAGGTCTGAATTGGGGGTAGTTGGAATTAGGCCCCTTAAAT
TAAGCTAGTGACTCAAAGTTTTAATTAAAGTTTAAACTCAACTCAAACTC
AATATTTATTTCATAATGATTTTCAACGTGTCCAGCCTTTCACATCTATG
ACATGTCTTACATCTTCTTGCTATCGATAAAACTTGAATTGACTTAAAAT
ATTTAGAAGATGGTAGGGTTTAGGATTAGATAGGTTGTACTAACATCATA
GTGGTGCAACAATCAAGTTGGCTCGAATAACTTTtcttcaaataatattt
ttagagCTTCAAAGTCAAAACAAGCTCATTATttcttaattgtttttaaa
aaatcttatctcATCCTTTGCGCTTCATTTCCATgttatctttttaaagt
ttttttttttttaataaaaattatttaaat Run BLAST on NCBI transcript from alignment at scaffold_309:422742..427813- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058292 ID=TCONS_00058292|Name=TCONS_00058292|organism=Clytia hemisphaerica|type=transcript|length=5072bp|location=Sequence derived from alignment at scaffold_309:422742..427813- (Clytia hemisphaerica)
TTTTCAGATAGAAAAGTATTACCATAAAAACATAATTATTTAAATTTGTA
CTGCTGGTCAGTCAAAAGATTTACAATGAAGCTGGTTTTTGTTGTAGTTT
TTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAACACCACAAT
TACAAGAATATGTTGAAATATATGAATGACATTCACAAAAAATGTCCAAA
TATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGGTCGAAGGT
TGACTGTTATGGAGATAACAGAAAATCCTGGTAAATATGTCCCTTTGAAG
CCTAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTTTTGGGACG
TGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTATTTGGCTA
AGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCCATATTTTG
CCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGTGATTGTTC
AAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAACAGGTAAT
TCTTCAGTATTGGCCGCGTGCTTATCATATAAATTACAATGTCAATCAAA
TCAATCCAATTTAATAAAGTATATCACTATAGTATATTTTAAATTATGTT
TTGTTTTTAAGTAGAAAAGTTAATTTTTGATCTTTTATCTGGCCTGGTTT
GGCTTAACATCCATATTTCTTTAAATGTCTTTTTTTATTCTTTCTTTTTT
TGCAAATATCATTAAGGGTACACGATGGTCAATTTAAAAAATTAAAGCAA
AAAAAATCTGAAAATTTTTTTTTGAATGTATCTGATTCAAAATTTTACGC
TCTTTTCAAAGATGTATATTATTAAATGGAAAATTGTTTGAATTGTCGTA
AAAAATCGCAAAACATACTGCATTGAAAGAGTTTTNCTGAAAAATTTTTT
TTGAATGTATCTGATTCAAAATTTTACGCTCTTTTCAAAGATGTATATTA
TTAAATGGAAAATTGTTTGAATCGTCGTAAAAAATCGCAAAACATACTGC
ATTGAAAGAGTTTTATTATTTTTTCATTGAAAGCTTTTACAAAAGATTTC
TTTTTAAAAACCCCCATTGATTAGATTTTCTTTTTATGTTCAGTGAAGAG
AACATTCTTCTTTAATTCCAATTCAATAAACAGATTAACTTTTCGGCAAA
GATCAAAGCAGATAGTAGAGAACTTTAAACTTGGATTTCTTGAAAACTNG
CACTTTTGAACTATACAAATCGTTTTAACCAAAAAGTAAGGCATAACGAT
CTATAACAAATTTTGTTCAGATAGTCAATTGACCATCGTGTACCCTTAAA
CATGATATCATTTTTTACATACAGAAATTTTCCAGATCAGTTCAAGAAGA
TTCGTAATCAACAGCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAA
TATCCTTTTGTACTATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAA
TTACCCTTTCGATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCAC
CAGATGATGATGTTTTTGTCCATATTGCGAAGAACTACTCTTACGATCAC
CCAACCATGCATCTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGG
TACACCACTCATTCATCATCTTCCTTTTTAGACCAAGATCGCCAAAATAT
TTTACTTTTTGCAAATAAATTTTTAGCATATCAAATTTCTTCAGCATTAA
AAACAGAGCTTTTGTCTAAAATCCACAAACAAATAGTCCTAAGTTTTATT
CATATTTACATTTGATAACAATAACCTAGGTAACAATACTTTAAATTTTT
GTCTGTTGGTCACTGTAGTAATAAGTCATTTGATATTTTTTTGCTGTTAA
CAGGTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATGCAA
GACTACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGAGATGGA
CTGTTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGGAAGACC
ACAAGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGGTTGAAA
GGAACCGTCAAGTAAACTTTTAATATAATTTATGTATGAAAAATAGACAA
TTCATCAAGAGTCTGTATTTTTGCTTTAGATTATTCTTTCCTTAGTTGCT
AGAACAACATGAGCTAGTTGTACTTAAACATATGCCCTTTTCATTTTCAG
AGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCTATC
CTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGATTAT
TACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCATGG
CAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGATTG
TAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCNGTTGAAGA
GAAATATTGAATTAAAGATAAAAATTAGGTTTTTTAGAAACAAAAAAATG
TAAATAGGCATAATTACTCAACGAAACGATAAATCAACAAAATGAAGCAC
GGTTTTGTACCTACGGGGGAGGGCTTTAAGGAGCTCTATTTTTTGTTATG
TGAAAGTTATTCAATTTGTCATGTTAACTCATTGAAGTTTTATTGTACTT
TTTGAAAATTACGTCATAGTTGTTGAGTAAGCCGCCATTTTGAAAAATTT
TTTACACCATTCAGANTTGAGATGGACTGTTGTAAATTTCCTCATGGACA
ACACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATA
TCAAACTCTCACATTTGGGGTTGAAAGGAACCGTCAAGTAAACTTTTAAT
ATAATTTATGTATGAAAAATAGACAATTTGACTGTGTTTTTGCTTTAGAT
TATTCTTTCCTTAGTTGCTAGAACAACATGAGCTAGCTGTAATTAAACAT
AATGCCCTTTTCATTTTCAGAGACACTTCTGGAAATGGTATTACTGGTGC
AAAGATTGACGTCAGCTATCCTGATGGTAAAACACGGATACCCATCCATT
CCAGAGATGGTGGTGATTATTACCGATTGCTTTTGAAGGGAAATTACAGT
GTTACAGTAAGTGTTCATGGCAAAACCTTGACTACACAAGTTCATGTTGA
TGGTCTGCCAACGAAGATTGTAGATTTCATTGTCGGTCCTGATTCCATTA
CCGCTCAATCCGTACATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCA
ACTGTAAATGTTCCAGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGA
TGATATCAAGAAAGAAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCT
CCAGATCTGATAATGTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTT
ATCGTTTGCGTTCTGGCTGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTT
GAGGGGTAACGATAACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAAT
TTGATACCTATGAGCCGTAGAATATATGTATGTTGGAATTATTATAAATA
AAAATAAAAAAATGGGGTGCATTTTATTTGATGTTATAAATCTTTCTGTG
GGAAATAATTGGATTAATATTATGCTAATAGAATTTTCCTGTCAGTTCTC
TCGTTGCATTTTGTAAGTTTTATTTGGGTTGGATGCATTAAGGAAGCTAA
TACTCATTTTAGATTATTTCTTTCTACTAAAGCTATTTCTTCAGATCTCT
TTAATTTACTTGCCATCTAGCTGCACTCTATAGATTCTTAAAAGAGAGAC
TATACTTTATGATAATAATATTTGTTTGTGTAAATAGTCGCGCTACTTTG
TTATTTTCTTTTCGTCTGAACTTCAAAAAGCTGGACAGTCTTTCTGGAAA
AAGATCCATTATGTGCTAAAAGTAAAAGAAAGAAATTTTATTCCCTTGAA
CCTACATTTTCTGTATAGAAATTTGGAAATCTGTTTGAGGTCTAAATCCT
CTCCTGTCCTGCTGTCCTGACTCTCCAAAAATTCTTCAGTTTTTATTTAT
AATGAGCTTATTGGATTTGTTTCTAGAAAGTGTTCAGATGACTTAATTGT
ATCACATATATTTTTTGTACTGTTTGGTTTATACCTCCTCCAGAAAACTT
TCTCACAAAACTTTAAAACAGAACAAAGCCTACGTCACAGGTAAAAAAAT
TTGATTTCCTGATTTTTAGGGTAATTACCCGGAAAACGTCAAAACTTTTA
AAAACGAACCAATCTTTTGAAGCACAAAGATAAAGTCCCTCAAAGCCAAT
AATCTCAAAGTTCATTAATAAATCAGAACCTTTATTTATTATTTTTGTAT
ATTTTCTTGTGTTTTAGTTGTATTATTTTCAACTTAGATTTTATGTTTTG
TATTGCCACACTACTAAAATAAAGAAATGTAATATGAATTGTTGTCAAGG
GAGATAGAATAATTAAATTCTCTTTTCAAAAGTTTAGTAAGATATAATTC
CCTTGGGACTGGTTTCCATAGGGTAACAAAAAGGAGTGCATCCTCGCTAC
CTTAATTCAAAAAGGACCTAAGTCCTTGAAGGGTTAGTTCAAAAGGGGCG
TAAGGTCTGAATTGGGGGTAGTTGGAATTAGGCCCCTTAAATTAAGCTAG
TGACTCAAAGTTTTAATTAAAGTTTAAACTCAACTCAAACTCAATATTTA
TTTCATAATGATTTTCAACGTGTCCAGCCTTTCACATCTATGACATGTCT
TACATCTTCTTGCTATCGATAAAACTTGAATTGACTTAAAATATTTAGAA
GATGGTAGGGTTTAGGATTAGATAGGTTGTACTAACATCATAGTGGTGCA
ACAATCAAGTTGGCTCGAATAACTTTTCTTCAAATAATATTTTTAGAGCT
TCAAAGTCAAAACAAGCTCATTATTTCTTAATTGTTTTTAAAAAATCTTA
TCTCATCCTTTGCGCTTCATTTCCATGTTATCTTTTTAAAGTTTTTTTTT
TTTTAATAAAAATTATTTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058292-exon-scaffold_309-1575043694:427269..427813 | TCONS_00058292-exon-scaffold_309-1575043694:427269..427813 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1575043694:426165..426439 | TCONS_00058292-exon-scaffold_309-1575043694:426165..426439 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1575043694:425703..425910 | TCONS_00058292-exon-scaffold_309-1575043694:425703..425910 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1575043694:422742..424793 | TCONS_00058292-exon-scaffold_309-1575043694:422742..424793 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1510915933:427269..427813 | TCONS_00058292-exon-scaffold_309-1510915933:427269..427813 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1510915933:426165..426439 | TCONS_00058292-exon-scaffold_309-1510915933:426165..426439 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1510915933:425703..425910 | TCONS_00058292-exon-scaffold_309-1510915933:425703..425910 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1510915933:422742..424793 | TCONS_00058292-exon-scaffold_309-1510915933:422742..424793 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1491911889:427269..427813 | TCONS_00058292-exon-scaffold_309-1491911889:427269..427813 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1491911889:426165..426439 | TCONS_00058292-exon-scaffold_309-1491911889:426165..426439 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1491911889:425703..425910 | TCONS_00058292-exon-scaffold_309-1491911889:425703..425910 | Clytia hemisphaerica | exon |
| TCONS_00058292-exon-scaffold_309-1491911889:422742..424793 | TCONS_00058292-exon-scaffold_309-1491911889:422742..424793 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:422742..427813 - |
Blast
BLAST of TCONS_00058292 vs. Swiss-Prot (Human)
Match: CBPD (Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2) HSP 1 Score: 365.925 bits (938), Expect = 5.885e-107 Identity = 185/362 (51.10%), Postives = 242/362 (66.85%), Query Frame = 1
Query: 133 EFKHHNYKNMLKYMNDIHKKCPNITRLYDLDNKTVQGRRLTVMEITENPGKYVPLKPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDCSSVRGRANGHGIDLNRNFPDQFKKIRN-QQPETEAIIKWLDQYPFVLSANLHGGSLVANYPFDDDEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC-----GDHFKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKD-TSGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHGKTLTTQ 1197
+F HH++ +M ++ + PNITRLY L K+V+ R L VMEI++NPG + P +P FKYIGNMHGNEV+GRE LL L++YLC ++ +PE L+ TRIH++PSMNPDGYEK+ EGD SV GR N + DLNRNFPDQF +I + QPET A++ W+ YPFVLSANLHGGSLV NYPFDDDE+ Y+ SPDD VF IA +YS ++ M G+ C ++F GITNGA WYNV GGMQD+NYL N FE+T+E+ C K+P + L WE ++RSLI ++K H G++G V D T G GI A I V+ + P+ + GDY+RLL+ G Y +T S G T+
Sbjct: 500 DFHHHHFPDMEIFLRRFANEYPNITRLYSL-GKSVESRELYVMEISDNPGVHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVHNTRIHLMPSMNPDGYEKSQEGDSISVIGRNNSNNFDLNRNFPDQFVQITDPTQPETIAVMSWMKSYPFVLSANLHGGSLVVNYPFDDDEQGLATYSKSPDDAVFQQIALSYSKENSQMFQGR-PCKNMYPNEYFPHGITNGASWYNVPGGMQDWNYLQTNCFEVTIELGCVKYPLEKELPNFWEQNRRSLIQFMKQVHQGVRGFVLDATDGRGILNATISVA----EINHPVTTYKTGDYWRLLVPGTYKITASARGYNPVTK 854 HSP 2 Score: 297.36 bits (760), Expect = 9.732e-84 Identity = 166/402 (41.29%), Postives = 236/402 (58.71%), Query Frame = 1
Query: 208 RLYDLDNKTVQGRRLTVMEITENPGKYVPL-------------------KPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDC-------SSVRGRANGHGIDLNRNFPDQFKK----IRNQQPETEAIIKWLDQYPFVLSANLHGGSLVANYPFDD--DEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC-GDH---FKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKDT-SGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHG--KTLTTQVHVDGLPTKIVDFIVGP--DSITAQSVHAAAPA 1290
RL+ + ++V+GR L V+ +T G +P +P K +GNMHG+E + R+ L+YL L Y +P LL TT +++LPS+NPDG+E+A EGDC S GR N G DLNR+FPDQF ++ PE A+I+W+ + FVLS NLHGGS+VA+YPFDD + K +Y+ + DD+VF ++AK Y+ +HP M G+ C GD FKDGITNGA WY+V GGMQDYNY+ N FEIT+E+ CCK+P L+++WE+++ SLI I+ H+G+KG VKD+ +G+G+ A I V+ + I + GD+YRLL+ G Y++TV + G T V V P VDF + P S+ + A + A
Sbjct: 81 RLFSI-GRSVEGRPLWVLRLTAGLGSLIPEGDAGPDAAGPDAAGPLLPGRPQVKLVGNMHGDETVSRQVLIYLARELAAGYRRGDPRLVRLLNTTDVYLLPSLNPDGFERAREGDCGFGDGGPSGASGRDNSRGRDLNRSFPDQFSTGEPPALDEVPEVRALIEWIRRNKFVLSGNLHGGSVVASYPFDDSPEHKATGIYSKTSDDEVFKYLAKAYASNHPIMKTGEPHCPGDEDETFKDGITNGAHWYDVEGGMQDYNYVWANCFEITLELSCCKYPPASQLRQEWENNRESLITLIEKVHIGVKGFVKDSITGSGLENATISVAGINHN----ITTGRFGDFYRLLVPGTYNLTVVLTGYMPLTVTNVVVKEGPATEVDFSLRPTVTSVIPDTTEAVSTA 477 HSP 3 Score: 197.593 bits (501), Expect = 2.320e-51 Identity = 122/353 (34.56%), Postives = 197/353 (55.81%), Query Frame = 1
Query: 136 FKHHNYKNMLKYMNDIHKKCPNITRLYDLDNKTVQGRRLTVMEITENPGKYVPLKPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDCSSVRGRANGHGIDLNRNFPDQFKKIRNQQPETEAIIKWLDQ-YPFVLSANLHGGSLVANYPFDDDEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC----GDHFKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKDTSGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHG 1179
+++H+YK++ +++ + P+IT L +L T + R + +EI+ P P +P +++ +HGN +G E LL L ++LC +Y KNP L+ TRI I+PS+NPDG E+A E DC+S G+ N G DL+ +F + QPET+AII+ L Q F LS L GGS++ YP+D + E + + H+A Y+ +HP+MH+G+ C ++ G+ GA+W++ G M+DY+ +G+ EITV CC FP L W D+KRSL+ + H G+ G VKD +G I+ A I ++ I + +++GG ++ LL G +++ G
Sbjct: 931 YRYHSYKDLSEFLRGLVMNYPHITNLTNLGQST-EYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCLNY-KKNPAVTQLVDRTRIVIVPSLNPDGRERAQEKDCTSKIGQTNARGKDLDTDFTNN-----ASQPETKAIIENLIQKQDFSLSVALDGGSMLVTYPYDKPVQTVE------NKETLKHLASLYANNHPSMHMGQPSCPNKSDENIPGGVMRGAEWHSHLGSMKDYSVTYGHCPEITVYTSCCYFPSAARLPSLWADNKRSLLSMLVEVHKGVHGFVKDKTGKPISKAVIVLN-----EGIKVQTKEGGYFHVLLAPGVHNIIAIADG 1265
The following BLAST results are available for this feature:
|
