TCONS_00058291 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058291
Unique NameTCONS_00058291
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3078

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058291 ID=TCONS_00058291|Name=TCONS_00058291|organism=Clytia hemisphaerica|type=transcript|length=3078bp
ttcagaTAGAAAAGTATTACCATAAAAacataattatttaaatttgTACT
GCTGGTCAGTCAAAAGATTTACAATGAAGCTGGTTTTTGTTGTAGTTTTT
GGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAACACCACAATTA
CAAGAATATGTTGAAATATATGAATGACATTCACAAAAAATGTCCAAATA
TAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGGTCGAAGGTTG
ACTGTTATGGAGATAACAGAAAATCCTGGTAAATATGTCCCTTTGAAGCC
TAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTTTTGGGACGTG
AAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTATTTGGCTAAG
AATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCCATATTTTGCC
ATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGTGATTGTTCAA
GTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAACAGAAATTTT
CCAGATCAGTTCAAGAAGATTCGTAATCAACAGCCAGAAACTGAAGCCAT
TATAAAATGGTTGGATCAATATCCTTTTGTACTATCCGCCAACCTTCACG
GAGGAAGTTTGGTTGCCAATTACCCTTTCGATGATGATGAGAAGATGAAA
GAAATGTATGCAGCATCACCAgatgatgatgtttttgtcCATATTGCGAA
GAACTACTCTTACGATCACCCAACCATGCATCTCGGAAAGACAAAATGTG
GGGATCACTTCAAAGATGGTATTACGAACGGTGCTAAATGGTACAATGTA
GCAGGTGGCATGCAAGACTACAATTACTTACATGGAAATGCATTTGAAAT
TACTGTTGAGATGGACTGTTGTAAATTTCCTCATGGACAACACCTCAAAA
AACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATATCAAACTCTCA
CATTTGGGGTTGAAAGGAACCGTCAAagACACTTCTGGAAATGGTATTAC
TGGTGCAAAGATTGACGTCAGCTATCCTGATGGTAAAACACGGATACCCA
TCCATTCCAGAGATGGTGGTGATTATTACCGATTGCTTTTGAAGGGAAAT
TACAGTGTTACAGTAAGTGTTCATGGCAAAACCTTGACTACACAAGTTCA
TGTTGATGGTCTGCCAACGAAGATTGTAGATTTCATTGTCGGTCCTGATT
CCATTACCGCTCAATCCGTACATGCAGCTGCACCAGCAGTATCTGGAAAT
GTTGCAACTGTAAATGTTCCAGCTGTAAATGTTATGGCTGCTGCAAATCC
TGTTGATGATATCAAGAAAGAAGTAAAAGAACACCAAGGAAAACCTGTGA
AGTCCTCCAGATCTGATAATGTGGCAGCAGCAGCTGTCATTGTCACCATT
GGTGTTATCGTTTGCGTTCTGGCTGGTGTTGTTTTGTTCAGAAAAGTGAA
AGATTTGAGGGGTAACGATAACCAAGGTGGCTATGCAAAAATCAATCAAG
AAAAATTTGATACCTATGAGCCGTAGAATATATGTATGTTGGAAttatta
taaataaaaataaaaaaatggggTGCATTTTATTTGATGTTATAAATCTT
TCTGTGGGAAATAATTGGATTAATATTATGCTAATAGAATTTTCCTGTCA
GTTCTCTCGTTGCATTTTGTAAGTTTTATTTGGGTTGGATGCATTAAGGA
AGCTAATACtcattttagattatttcttTCTACTAAAGCTATTTCTTCAG
ATCTCTTTAATTTACTTGCCATCTAGCTGCACTCTATAGATTCTTAAAAG
AGAGACTATACTTTATGATAATAATATTTGTTTGTGTAAATAGTCGCGCT
actttgttattttcttttcgtCTGAACTTCAAAAAGCTGGACAGTCTTTC
TGGAAAAAGATCCATTATGTgctaaaagtaaaagaaagaaattttattcc
CTTGAACCTACATTTTCTGTATAGAAATTTGGAAATCTGTTTGAGGTCTA
AATCCTCTCCTGTCCTGCTGTCCTGACTCTCCAAAAATTCTTCAGTTTTT
ATTTATAATGAGCTTATTGGATTTGTTTCTAGAAAGTGTTCAGATGACTT
AATTGTATCACATATATTTTTTGTACTGTTTGGTTTATACCTCCTCCAGA
AAACTTTctcacaaaactttaaaacagaACAAAGCCTACGTCAcaggtaa
aaaaatttgatttcctgatttttaggGTAATTACCCGGAAAAcgtcaaaa
cttttaaaaacgaACCAATCTTTTGAAGCACAAAGATAAAGTCCCTCAAA
GCCAATAATCTCAAAGTTCATTAATAAATCAGAAcctttatttattattt
ttgtatattttcttGTGTTTTAGTTGTATTATTTTCAACTTAgattttat
gttttgtattGCCACACTactaaaataaagaaatgtaATATGAATTGTTG
TCAAGGGAGATAGAATAATTAAATTctcttttcaaaagtttagtaAGATA
TAATTCCCTTGGGACTGGTTTCCATAGGGTAACAAAAAGGAGTGCATCCt
cgctaccttaattcaaaaaggACCTAAGTCCTTGAAGGGTTAGTTCAAAA
GGGGCGTAAGGTCTGAATTGGGGGTAGTTGGAATTAGGCCCCTTAAATTA
AGCTAGTGACTCAAAGTTTTAATTAAAGTTTAAACTCAACTCAAACTCAA
TATTTATTTCATAATGATTTTCAACGTGTCCAGCCTTTCACATCTATGAC
ATGTCTTACATCTTCTTGCTATCGATAAAACTTGAATTGACTTAAAATAT
TTAGAAGATGGTAGGGTTTAGGATTAGATAGGTTGTACTAACATCATAGT
GGTGCAACAATCAAGTTGGCTCGAATAACTTTtcttcaaataatattttt
agagCTTCAAAGTCAAAACAAGCTCATTATttcttaattgtttttaaaaa
atcttatctcATCCTTTGCGCTTCATTTCCATgttatctttttaaagttt
ttttttttttaataaaaattatttaaat
Run BLAST on NCBI

protein sequence of TCONS_00058291-protein

>TCONS_00058291-protein ID=TCONS_00058291-protein|Name=TCONS_00058291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MKLVFVVVFGLVFTICHAIEFKHHNYKNMLKYMNDIHKKCPNITRLYDLD
NKTVQGRRLTVMEITENPGKYVPLKPNFKYIGNMHGNEVLGRETLLYLLD
YLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDCSSVRGRANG
HGIDLNRNFPDQFKKIRNQQPETEAIIKWLDQYPFVLSANLHGGSLVANY
PFDDDEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKCGDHFKDGI
TNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKR
SLIDYIKLSHLGLKGTVKDTSGNGITGAKIDVSYPDGKTRIPIHSRDGGD
YYRLLLKGNYSVTVSVHGKTLTTQVHVDGLPTKIVDFIVGPDSITAQSVH
AAAPAVSGNVATVNVPAVNVMAAANPVDDIKKEVKEHQGKPVKSSRSDNV
AAAAVIVTIGVIVCVLAGVVLFRKVKDLRGNDNQGGYAKINQEKFDTYEP
Run BLAST on NCBI

transcript from alignment at scaffold_309:422742..427811-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058291 ID=TCONS_00058291|Name=TCONS_00058291|organism=Clytia hemisphaerica|type=transcript|length=5070bp|location=Sequence derived from alignment at scaffold_309:422742..427811- (Clytia hemisphaerica)
TTCAGATAGAAAAGTATTACCATAAAAACATAATTATTTAAATTTGTACT
GCTGGTCAGTCAAAAGATTTACAATGAAGCTGGTTTTTGTTGTAGTTTTT
GGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAACACCACAATTA
CAAGAATATGTTGAAATATATGAATGACATTCACAAAAAATGTCCAAATA
TAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGGTCGAAGGTTG
ACTGTTATGGAGATAACAGAAAATCCTGGTAAATATGTCCCTTTGAAGCC
TAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTTTTGGGACGTG
AAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTATTTGGCTAAG
AATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCCATATTTTGCC
ATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGTGATTGTTCAA
GTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAACAGGTAATTC
TTCAGTATTGGCCGCGTGCTTATCATATAAATTACAATGTCAATCAAATC
AATCCAATTTAATAAAGTATATCACTATAGTATATTTTAAATTATGTTTT
GTTTTTAAGTAGAAAAGTTAATTTTTGATCTTTTATCTGGCCTGGTTTGG
CTTAACATCCATATTTCTTTAAATGTCTTTTTTTATTCTTTCTTTTTTTG
CAAATATCATTAAGGGTACACGATGGTCAATTTAAAAAATTAAAGCAAAA
AAAATCTGAAAATTTTTTTTTGAATGTATCTGATTCAAAATTTTACGCTC
TTTTCAAAGATGTATATTATTAAATGGAAAATTGTTTGAATTGTCGTAAA
AAATCGCAAAACATACTGCATTGAAAGAGTTTTNCTGAAAAATTTTTTTT
GAATGTATCTGATTCAAAATTTTACGCTCTTTTCAAAGATGTATATTATT
AAATGGAAAATTGTTTGAATCGTCGTAAAAAATCGCAAAACATACTGCAT
TGAAAGAGTTTTATTATTTTTTCATTGAAAGCTTTTACAAAAGATTTCTT
TTTAAAAACCCCCATTGATTAGATTTTCTTTTTATGTTCAGTGAAGAGAA
CATTCTTCTTTAATTCCAATTCAATAAACAGATTAACTTTTCGGCAAAGA
TCAAAGCAGATAGTAGAGAACTTTAAACTTGGATTTCTTGAAAACTNGCA
CTTTTGAACTATACAAATCGTTTTAACCAAAAAGTAAGGCATAACGATCT
ATAACAAATTTTGTTCAGATAGTCAATTGACCATCGTGTACCCTTAAACA
TGATATCATTTTTTACATACAGAAATTTTCCAGATCAGTTCAAGAAGATT
CGTAATCAACAGCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAATA
TCCTTTTGTACTATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATT
ACCCTTTCGATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCA
GATGATGATGTTTTTGTCCATATTGCGAAGAACTACTCTTACGATCACCC
AACCATGCATCTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGGTA
CACCACTCATTCATCATCTTCCTTTTTAGACCAAGATCGCCAAAATATTT
TACTTTTTGCAAATAAATTTTTAGCATATCAAATTTCTTCAGCATTAAAA
ACAGAGCTTTTGTCTAAAATCCACAAACAAATAGTCCTAAGTTTTATTCA
TATTTACATTTGATAACAATAACCTAGGTAACAATACTTTAAATTTTTGT
CTGTTGGTCACTGTAGTAATAAGTCATTTGATATTTTTTTGCTGTTAACA
GGTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATGCAAGA
CTACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGAGATGGACT
GTTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGGAAGACCAC
AAGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGGTTGAAAGG
AACCGTCAAGTAAACTTTTAATATAATTTATGTATGAAAAATAGACAATT
CATCAAGAGTCTGTATTTTTGCTTTAGATTATTCTTTCCTTAGTTGCTAG
AACAACATGAGCTAGTTGTACTTAAACATATGCCCTTTTCATTTTCAGAG
ACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCTATCCT
GATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGATTATTA
CCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCATGGCA
AAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGATTGTA
GATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCNGTTGAAGAGA
AATATTGAATTAAAGATAAAAATTAGGTTTTTTAGAAACAAAAAAATGTA
AATAGGCATAATTACTCAACGAAACGATAAATCAACAAAATGAAGCACGG
TTTTGTACCTACGGGGGAGGGCTTTAAGGAGCTCTATTTTTTGTTATGTG
AAAGTTATTCAATTTGTCATGTTAACTCATTGAAGTTTTATTGTACTTTT
TGAAAATTACGTCATAGTTGTTGAGTAAGCCGCCATTTTGAAAAATTTTT
TACACCATTCAGANTTGAGATGGACTGTTGTAAATTTCCTCATGGACAAC
ACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATATC
AAACTCTCACATTTGGGGTTGAAAGGAACCGTCAAGTAAACTTTTAATAT
AATTTATGTATGAAAAATAGACAATTTGACTGTGTTTTTGCTTTAGATTA
TTCTTTCCTTAGTTGCTAGAACAACATGAGCTAGCTGTAATTAAACATAA
TGCCCTTTTCATTTTCAGAGACACTTCTGGAAATGGTATTACTGGTGCAA
AGATTGACGTCAGCTATCCTGATGGTAAAACACGGATACCCATCCATTCC
AGAGATGGTGGTGATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGT
TACAGTAAGTGTTCATGGCAAAACCTTGACTACACAAGTTCATGTTGATG
GTCTGCCAACGAAGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACC
GCTCAATCCGTACATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAAC
TGTAAATGTTCCAGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATG
ATATCAAGAAAGAAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCC
AGATCTGATAATGTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTAT
CGTTTGCGTTCTGGCTGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTTGA
GGGGTAACGATAACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTT
GATACCTATGAGCCGTAGAATATATGTATGTTGGAATTATTATAAATAAA
AATAAAAAAATGGGGTGCATTTTATTTGATGTTATAAATCTTTCTGTGGG
AAATAATTGGATTAATATTATGCTAATAGAATTTTCCTGTCAGTTCTCTC
GTTGCATTTTGTAAGTTTTATTTGGGTTGGATGCATTAAGGAAGCTAATA
CTCATTTTAGATTATTTCTTTCTACTAAAGCTATTTCTTCAGATCTCTTT
AATTTACTTGCCATCTAGCTGCACTCTATAGATTCTTAAAAGAGAGACTA
TACTTTATGATAATAATATTTGTTTGTGTAAATAGTCGCGCTACTTTGTT
ATTTTCTTTTCGTCTGAACTTCAAAAAGCTGGACAGTCTTTCTGGAAAAA
GATCCATTATGTGCTAAAAGTAAAAGAAAGAAATTTTATTCCCTTGAACC
TACATTTTCTGTATAGAAATTTGGAAATCTGTTTGAGGTCTAAATCCTCT
CCTGTCCTGCTGTCCTGACTCTCCAAAAATTCTTCAGTTTTTATTTATAA
TGAGCTTATTGGATTTGTTTCTAGAAAGTGTTCAGATGACTTAATTGTAT
CACATATATTTTTTGTACTGTTTGGTTTATACCTCCTCCAGAAAACTTTC
TCACAAAACTTTAAAACAGAACAAAGCCTACGTCACAGGTAAAAAAATTT
GATTTCCTGATTTTTAGGGTAATTACCCGGAAAACGTCAAAACTTTTAAA
AACGAACCAATCTTTTGAAGCACAAAGATAAAGTCCCTCAAAGCCAATAA
TCTCAAAGTTCATTAATAAATCAGAACCTTTATTTATTATTTTTGTATAT
TTTCTTGTGTTTTAGTTGTATTATTTTCAACTTAGATTTTATGTTTTGTA
TTGCCACACTACTAAAATAAAGAAATGTAATATGAATTGTTGTCAAGGGA
GATAGAATAATTAAATTCTCTTTTCAAAAGTTTAGTAAGATATAATTCCC
TTGGGACTGGTTTCCATAGGGTAACAAAAAGGAGTGCATCCTCGCTACCT
TAATTCAAAAAGGACCTAAGTCCTTGAAGGGTTAGTTCAAAAGGGGCGTA
AGGTCTGAATTGGGGGTAGTTGGAATTAGGCCCCTTAAATTAAGCTAGTG
ACTCAAAGTTTTAATTAAAGTTTAAACTCAACTCAAACTCAATATTTATT
TCATAATGATTTTCAACGTGTCCAGCCTTTCACATCTATGACATGTCTTA
CATCTTCTTGCTATCGATAAAACTTGAATTGACTTAAAATATTTAGAAGA
TGGTAGGGTTTAGGATTAGATAGGTTGTACTAACATCATAGTGGTGCAAC
AATCAAGTTGGCTCGAATAACTTTTCTTCAAATAATATTTTTAGAGCTTC
AAAGTCAAAACAAGCTCATTATTTCTTAATTGTTTTTAAAAAATCTTATC
TCATCCTTTGCGCTTCATTTCCATGTTATCTTTTTAAAGTTTTTTTTTTT
TTAATAAAAATTATTTAAAT

Coding sequence (CDS) from alignment at scaffold_309:422742..427811-

>TCONS_00058291 ID=TCONS_00058291|Name=TCONS_00058291|organism=Clytia hemisphaerica|type=CDS|length=7515bp|location=Sequence derived from alignment at scaffold_309:422742..427811- (Clytia hemisphaerica)
AGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCTATC
CTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGATTAT
TACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCATGG
CAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGATTG
TAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTACATGCA
GCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCCAGCTGT
AAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAGAAGTAA
AAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAATGTGGCA
GCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCTGGCTGG
TGTTGTTTTGTTCAGAAAAGTGAAAGATTTGAGGGGTAACGATAACCAAG
GTGGCTATGCAAAAATCAATCAAGAAAAATTTGATACCTATGAGCCGTAG
ATTTGGGGTTGAAAGGAACCGTCAAGTATTACGAACGGTGCTAAATGGTA
CAATGTAGCAGGTGGCATGCAAGACTACAATTACTTACATGGAAATGCAT
TTGAAATTACTGTTGAGATGGACTGTTGTAAATTTCCTCATGGACAACAC
CTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATATCAA
ACTCTCACAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCAACAGCC
AGAAACTGAAGCCATTATAAAATGGTTGGATCAATATCCTTTTGTACTAT
CCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATTACCCTTTCGATGAT
GATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGATGTTTT
TGTCCATATTGCGAAGAACTACTCTTACGATCACCCAACCATGCATCTCG
GAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGTTTTTGT
TGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAAC
ACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCACAAAAAA
TGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGG
TCGAAGGTTGACTGTTATGGAGATAACAGAAAATCCTGGTAAATATGTCC
CTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTT
TTGGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTA
TTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCC
ATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGT
GATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAA
CAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCT
ATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGAT
TATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCA
TGGCAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGA
TTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTACAT
GCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCCAGC
TGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAGAAG
TAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAATGTG
GCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCTGGC
TGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTTGAGGGGTAACGATAACC
AAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATACCTATGAGCCG
TAGATTTGGGGTTGAAAGGAACCGTCAAGTATTACGAACGGTGCTAAATG
GTACAATGTAGCAGGTGGCATGCAAGACTACAATTACTTACATGGAAATG
CATTTGAAATTACTGTTGAGATGGACTGTTGTAAATTTCCTCATGGACAA
CACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTATAT
CAAACTCTCACAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCAACA
GCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAATATCCTTTTGTAC
TATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATTACCCTTTCGAT
GATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGATGT
TTTTGTCCATATTGCGAAGAACTACTCTTACGATCACCCAACCATGCATC
TCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGTTTT
TGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCA
AACACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCACAAA
AAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCA
AGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAATCCTGGTAAATATG
TCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAATGAA
GTTTTGGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAG
CTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTA
TCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAA
GGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTT
GAACAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCA
GCTATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGT
GATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGT
TCATGGCAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAACGA
AGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTA
CATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCC
AGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAG
AAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAAT
GTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCT
GGCTGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTTGAGGGGTAACGATA
ACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATACCTATGAG
CCGTAGATTTGGGGTTGAAAGGAACCGTCAAGTATTACGAACGGTGCTAA
ATGGTACAATGTAGCAGGTGGCATGCAAGACTACAATTACTTACATGGAA
ATGCATTTGAAATTACTGTTGAGATGGACTGTTGTAAATTTCCTCATGGA
CAACACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGATTA
TATCAAACTCTCACAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCA
ACAGCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAATATCCTTTTG
TACTATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATTACCCTTTC
GATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGA
TGTTTTTGTCCATATTGCGAAGAACTACTCTTACGATCACCCAACCATGC
ATCTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGT
TTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGT
TCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCAC
AAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGT
GCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAATCCTGGTAAAT
ATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAAT
GAAGTTTTGGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTAC
AAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTC
GTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTT
GAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGA
TTTGAACAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACG
TCAGCTATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGT
GGTGATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAG
TGTTCATGGCAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGCCAA
CGAAGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCC
GTACATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGT
TCCAGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGA
AAGAAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGAT
AATGTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGT
TCTGGCTGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTTGAGGGGTAACG
ATAACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATACCTAT
GAGCCGTAGATTTGGGGTTGAAAGGAACCGTCAAGTATTACGAACGGTGC
TAAATGGTACAATGTAGCAGGTGGCATGCAAGACTACAATTACTTACATG
GAAATGCATTTGAAATTACTGTTGAGATGGACTGTTGTAAATTTCCTCAT
GGACAACACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCATTGA
TTATATCAAACTCTCACAAATTTTCCAGATCAGTTCAAGAAGATTCGTAA
TCAACAGCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAATATCCTT
TTGTACTATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATTACCCT
TTCGATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGA
TGATGTTTTTGTCCATATTGCGAAGAACTACTCTTACGATCACCCAACCA
TGCATCTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCT
GGTTTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTG
AGTTCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGACATT
CACAAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGAC
TGTGCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAATCCTGGTA
AATATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGG
AATGAAGTTTTGGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATG
TACAAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAA
CTCGTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCT
GTTGAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCAT
AGATTTGAACAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTG
ACGTCAGCTATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGAT
GGTGGTGATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGT
AAGTGTTCATGGCAAAACCTTGACTACACAAGTTCATGTTGATGGTCTGC
CAACGAAGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAA
TCCGTACATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAA
TGTTCCAGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCA
AGAAAGAAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCT
GATAATGTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTG
CGTTCTGGCTGGTGTTGTTTTGTTCAGAAAAGTGAAAGATTTGAGGGGTA
ACGATAACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATACC
TATGAGCCGTAGATTTGGGGTTGAAAGGAACCGTCAAGTATTACGAACGG
TGCTAAATGGTACAATGTAGCAGGTGGCATGCAAGACTACAATTACTTAC
ATGGAAATGCATTTGAAATTACTGTTGAGATGGACTGTTGTAAATTTCCT
CATGGACAACACCTCAAAAAACAATGGGAAGACCACAAGCGCTCTCTCAT
TGATTATATCAAACTCTCACAAATTTTCCAGATCAGTTCAAGAAGATTCG
TAATCAACAGCCAGAAACTGAAGCCATTATAAAATGGTTGGATCAATATC
CTTTTGTACTATCCGCCAACCTTCACGGAGGAAGTTTGGTTGCCAATTAC
CCTTTCGATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGA
TGATGATGTTTTTGTCCATATTGCGAAGAACTACTCTTACGATCACCCAA
CCATGCATCTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAA
GCTGGTTTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTA
TTGAGTTCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGAC
ATTCACAAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAA
GACTGTGCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAATCCTG
GTAAATATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCAT
GGGAATGAAGTTTTGGGACGTGAAACTTTGCTGTATCTTTTGGATTATTT
ATGTACAAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAA
CAACTCGTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAA
GCTGTTGAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGG
CATAGATTTGAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036719XLOC_036719Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058291-exon-scaffold_309-1575043694:427269..427811TCONS_00058291-exon-scaffold_309-1575043694:427269..427811Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1575043694:426165..426439TCONS_00058291-exon-scaffold_309-1575043694:426165..426439Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1575043694:425728..425910TCONS_00058291-exon-scaffold_309-1575043694:425728..425910Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1575043694:424927..424951TCONS_00058291-exon-scaffold_309-1575043694:424927..424951Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1575043694:422742..424793TCONS_00058291-exon-scaffold_309-1575043694:422742..424793Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1510915933:427269..427811TCONS_00058291-exon-scaffold_309-1510915933:427269..427811Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1510915933:426165..426439TCONS_00058291-exon-scaffold_309-1510915933:426165..426439Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1510915933:425728..425910TCONS_00058291-exon-scaffold_309-1510915933:425728..425910Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1510915933:424927..424951TCONS_00058291-exon-scaffold_309-1510915933:424927..424951Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1510915933:422742..424793TCONS_00058291-exon-scaffold_309-1510915933:422742..424793Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1491911889:427269..427811TCONS_00058291-exon-scaffold_309-1491911889:427269..427811Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1491911889:426165..426439TCONS_00058291-exon-scaffold_309-1491911889:426165..426439Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1491911889:425728..425910TCONS_00058291-exon-scaffold_309-1491911889:425728..425910Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1491911889:424927..424951TCONS_00058291-exon-scaffold_309-1491911889:424927..424951Clytia hemisphaericaexon
TCONS_00058291-exon-scaffold_309-1491911889:422742..424793TCONS_00058291-exon-scaffold_309-1491911889:422742..424793Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058291-proteinTCONS_00058291-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:422742..427811 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.3746	18.828	11.3898	18.5183	0.0610267	7.39825	0.303917	1.14331	30.7536	23.9157	36.6384	42.6272	20.6204	12.5878	10.2443	14.672	15.4398	22.5573	42.4933	48.8742	22.4735	17.8818	15.9922	12.6735	15.6215	1.22128	34.0463	36.1539	17.8364	20.5087
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000834Peptidase_M14
IPR008969CarboxyPept-like_regulatory
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004181metallocarboxypeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004181 metallocarboxypeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00058291 vs. Swiss-Prot (Human)
Match: CBPD (Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2)

HSP 1 Score: 365.925 bits (938), Expect = 5.776e-107
Identity = 185/362 (51.10%), Postives = 242/362 (66.85%), Query Frame = 2 
Query:  131 EFKHHNYKNMLKYMNDIHKKCPNITRLYDLDNKTVQGRRLTVMEITENPGKYVPLKPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDCSSVRGRANGHGIDLNRNFPDQFKKIRN-QQPETEAIIKWLDQYPFVLSANLHGGSLVANYPFDDDEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC-----GDHFKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKD-TSGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHGKTLTTQ 1195
            +F HH++ +M  ++     + PNITRLY L  K+V+ R L VMEI++NPG + P +P FKYIGNMHGNEV+GRE LL L++YLC ++   +PE   L+  TRIH++PSMNPDGYEK+ EGD  SV GR N +  DLNRNFPDQF +I +  QPET A++ W+  YPFVLSANLHGGSLV NYPFDDDE+    Y+ SPDD VF  IA +YS ++  M  G+  C      ++F  GITNGA WYNV GGMQD+NYL  N FE+T+E+ C K+P  + L   WE ++RSLI ++K  H G++G V D T G GI  A I V+    +   P+ +   GDY+RLL+ G Y +T S  G    T+
Sbjct:  500 DFHHHHFPDMEIFLRRFANEYPNITRLYSL-GKSVESRELYVMEISDNPGVHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVHNTRIHLMPSMNPDGYEKSQEGDSISVIGRNNSNNFDLNRNFPDQFVQITDPTQPETIAVMSWMKSYPFVLSANLHGGSLVVNYPFDDDEQGLATYSKSPDDAVFQQIALSYSKENSQMFQGR-PCKNMYPNEYFPHGITNGASWYNVPGGMQDWNYLQTNCFEVTIELGCVKYPLEKELPNFWEQNRRSLIQFMKQVHQGVRGFVLDATDGRGILNATISVA----EINHPVTTYKTGDYWRLLVPGTYKITASARGYNPVTK 854

HSP 2 Score: 297.36 bits (760), Expect = 9.614e-84
Identity = 166/402 (41.29%), Postives = 236/402 (58.71%), Query Frame = 2 
Query:  206 RLYDLDNKTVQGRRLTVMEITENPGKYVPL-------------------KPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDC-------SSVRGRANGHGIDLNRNFPDQFKK----IRNQQPETEAIIKWLDQYPFVLSANLHGGSLVANYPFDD--DEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC-GDH---FKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKDT-SGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHG--KTLTTQVHVDGLPTKIVDFIVGP--DSITAQSVHAAAPA 1288
            RL+ +  ++V+GR L V+ +T   G  +P                    +P  K +GNMHG+E + R+ L+YL   L   Y   +P    LL TT +++LPS+NPDG+E+A EGDC       S   GR N  G DLNR+FPDQF        ++ PE  A+I+W+ +  FVLS NLHGGS+VA+YPFDD  + K   +Y+ + DD+VF ++AK Y+ +HP M  G+  C GD    FKDGITNGA WY+V GGMQDYNY+  N FEIT+E+ CCK+P    L+++WE+++ SLI  I+  H+G+KG VKD+ +G+G+  A I V+  +      I +   GD+YRLL+ G Y++TV + G      T V V   P   VDF + P   S+   +  A + A
Sbjct:   81 RLFSI-GRSVEGRPLWVLRLTAGLGSLIPEGDAGPDAAGPDAAGPLLPGRPQVKLVGNMHGDETVSRQVLIYLARELAAGYRRGDPRLVRLLNTTDVYLLPSLNPDGFERAREGDCGFGDGGPSGASGRDNSRGRDLNRSFPDQFSTGEPPALDEVPEVRALIEWIRRNKFVLSGNLHGGSVVASYPFDDSPEHKATGIYSKTSDDEVFKYLAKAYASNHPIMKTGEPHCPGDEDETFKDGITNGAHWYDVEGGMQDYNYVWANCFEITLELSCCKYPPASQLRQEWENNRESLITLIEKVHIGVKGFVKDSITGSGLENATISVAGINHN----ITTGRFGDFYRLLVPGTYNLTVVLTGYMPLTVTNVVVKEGPATEVDFSLRPTVTSVIPDTTEAVSTA 477

HSP 3 Score: 197.593 bits (501), Expect = 2.307e-51
Identity = 122/353 (34.56%), Postives = 197/353 (55.81%), Query Frame = 2 
Query:  134 FKHHNYKNMLKYMNDIHKKCPNITRLYDLDNKTVQGRRLTVMEITENPGKYVPLKPNFKYIGNMHGNEVLGRETLLYLLDYLCTSYLAKNPETEHLLQTTRIHILPSMNPDGYEKAVEGDCSSVRGRANGHGIDLNRNFPDQFKKIRNQQPETEAIIKWLDQ-YPFVLSANLHGGSLVANYPFDDDEKMKEMYAASPDDDVFVHIAKNYSYDHPTMHLGKTKC----GDHFKDGITNGAKWYNVAGGMQDYNYLHGNAFEITVEMDCCKFPHGQHLKKQWEDHKRSLIDYIKLSHLGLKGTVKDTSGNGITGAKIDVSYPDGKTRIPIHSRDGGDYYRLLLKGNYSVTVSVHG 1177
            +++H+YK++ +++  +    P+IT L +L   T + R +  +EI+  P    P +P  +++  +HGN  +G E LL L ++LC +Y  KNP    L+  TRI I+PS+NPDG E+A E DC+S  G+ N  G DL+ +F +        QPET+AII+ L Q   F LS  L GGS++  YP+D   +  E      + +   H+A  Y+ +HP+MH+G+  C     ++   G+  GA+W++  G M+DY+  +G+  EITV   CC FP    L   W D+KRSL+  +   H G+ G VKD +G  I+ A I ++       I + +++GG ++ LL  G +++     G
Sbjct:  931 YRYHSYKDLSEFLRGLVMNYPHITNLTNLGQST-EYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCLNY-KKNPAVTQLVDRTRIVIVPSLNPDGRERAQEKDCTSKIGQTNARGKDLDTDFTNN-----ASQPETKAIIENLIQKQDFSLSVALDGGSMLVTYPYDKPVQTVE------NKETLKHLASLYANNHPSMHMGQPSCPNKSDENIPGGVMRGAEWHSHLGSMKDYSVTYGHCPEITVYTSCCYFPSAARLPSLWADNKRSLLSMLVEVHKGVHGFVKDKTGKPISKAVIVLN-----EGIKVQTKEGGYFHVLLAPGVHNIIAIADG 1265
The following BLAST results are available for this feature:
BLAST of TCONS_00058291 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBPD5.776e-10751.10Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=... [more]
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