TCONS_00058223 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058223
Unique NameTCONS_00058223
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1729

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058223 ID=TCONS_00058223|Name=TCONS_00058223|organism=Clytia hemisphaerica|type=transcript|length=1729bp
agcacagccaatcaaattctttaaaatgggCGCGTGAATCATCCACTGAA
TCATACAGATAGAGGCTAGTCATTGCAAcacgaaaacaaacaaaatggcg
gatgaaGCAGCAATATTTGTCGCAATTGCTCTTGGATTACTCTTTTTTGT
CATTCCTTTATACCTGTTGACATtcagaaagaaagaagaagatgaaccGC
AAGCTGAAGTCAAGAAAGAGGAAGTCAAGAAAACTGAACCAAACACTTCA
AATAGTCAAAAGAAGCTTAGAAACcctgtgtcaaaaaagaaagtaCAGCA
AAACTTAAATGATAACGGAATCAATCATCCTTATCTAATATCATCACTAA
AAGGACATACTGGACCAATCACATCTCTTGATTTCAGTGACAATGGAAAG
CTTTTAGCTTCTTCCTCAGAAGatagAACCGTACGATTATGGAATGTGAA
AGATTTCAGAGAAAAAGATCATAAGTATGGTCGAGGTAATGTGGAATTTG
ATCATGCGTCAGATGTGGCATTTAGTCCAGATTCAAGagcCTTTGTGGCA
TCGCTTGCAAACGAGCAGAAAATTCGGGTCTTTAAAATAcacaaagagaa
aaaagagaCTGGAAGCACAACTATGAGTATTTCTCCagaatttgattttg
ataaaatccaCAAATCGGCAATTATCTCAGTGGGTATTTCATCGACTGGA
AAGTATATTATGACAGCTGATAAAGGAACACAAATTATCATCTGGTCTAT
TAAAGgtGAAGTGTATGACAAGATTGATACTTTATTGATGTACAACACGT
TTGCAAGTATCTCGCCATGTGGAAACCTGGTGGCTGCATGTGGGTTTACA
TCCGAAGTGAAATTATGGCACATGCAATTTTCAAAGAGTGGTGACTTCCA
GCAGactttgaAAGCGTTCGAAATCAAAGGACATAGAGCTGGAGTTCTTT
CATTCTCTTTCACAAACGACTCAAAACGTTTTGCAACAGCTTCAAAAGAT
GGAACCTGGAAAGTTTGGGATATCAATGTCAATTACCTGAAAAGTCAAGA
AGCCTATTTACTAAGCACTGGCAATTTTACCGGTTACGAAGAAGGCTTGA
ACGTCAACATTGCATTAACACATGATTATTTTACGGTGGCATTATCGGTT
GGTTCGCATTTGAAATATTATGATTCGAAAAGTGGTGAGATGGATAAAGA
AATATTACACGCCCACCCCGGAAGCATATGTGCACTGCGTTGGTATACAG
ACTCGAAAATGTTGGTCAGTTCAGGTGGTACGGATCGTATGCTTCGTGTT
TGGGAAAACATACACGGTGCAAAAGCCAACTTGGctgatttaaaagaaaa
actgaagAGAACAACTTCTGCTTCAATTAAGgAACGGATCGAACAACAGA
TAGAAGATTACACgaaatttttgaagaaattcaacaaagtaTAGAACTAG
AAGAATAAATTGACTTTATAAActttatgtaatttttttccgaaatttaa
atttgttttttatttattagttAGTTTATAAGGGTCTTATCTTGAAAAGG
GTCTTTAATTTTTAGTCAAAGGTCTTTGAATCTATATACAGTATCTAATA
TGTCTTCATAATGAAATCAAAACCGCTTTCTCTAACCGTCGAAAGTTTCG
TTTCGTGATTGCtctttttttgggtgatttttattttgttcaaatcATCA
TGGTTTCATCTTCTTAGCCAATATTCGTG
Run BLAST on NCBI

transcript from alignment at scaffold_309:251545..267483+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058223 ID=TCONS_00058223|Name=TCONS_00058223|organism=Clytia hemisphaerica|type=transcript|length=15939bp|location=Sequence derived from alignment at scaffold_309:251545..267483+ (Clytia hemisphaerica)
agcacagccaatcaaattctttaaaatgggCGCGTGAATCATCCACTGAA
TCATACAGATAGAGGCTAGTCATTGCAAcacgaaaacaaacaaaatggcg
gatgaaGCAGCAATATTTGTCGCAATTGCTCTTGGATTACTCTTTTTTGT
CATTCCTTTATACCTGTTGACATtcagaaagaaagaagaagatgaaccGC
AAGCTGAAGTCAAGAAAGAGGAAGTCAAGAAAACTGAACCAAACACTTCA
AATAGTCAAAAGAAGCTTAGAAACcctgtgtcaaaaaagaaagtaCAGCA
AAACTTAAATGATAACGGAATCAATCATCCTTATCTAATATCATCACTAA
AAGGACATACTGGACCAATCACATCTCTTGATTTCAGTGACAATGGAAAG
CTTTTAGCTTCTTCCTCAGAAGGCTagttgatttatttattttaaggGCA
TCTTATCAAAAATAGTCGTTTGAGCAGCTGAGGGCAGTCTACTCTAGATG
ACTTAAAAAAACTCATattatatcaggattagaaactaggctaatAGTcc
tacctcttttatctttccctttgcaACAATACAATGTTGACAAGCACCAC
ATCAGGTATTTTTTGTCAAGATCAGTTCCTTTGCTTCATCAGCATCAGAA
CACCCGCGATTGAACTCTCACCACATGGatggaaaaacttttatttgtAG
TTCATTTTCTCAATCGCATTTCTCAAACAAGCAGCCCTTCTTTTTGACac
ccgtggcctctcagtgccttgcacagCAGGGAGCTGTAAAATCTCACctt
atatatttttgtttcagtctATAATCCTATAAGGCTTACTTAGGTTTTTT
GGTGAaatgccgtcccatgttttgtcagatagtcccaaccCAAGTtcgag
cagttgacggtactttTTAAGCTGTCGAAAATATATTGGTGTATAAATTA
CATGAAAATATGCTCACATAATCCCATTGCCATTGGTTCATTACATCATA
TTTCATTGTTTGCGCGATTGAAGCGAACCACATCGCACTAGTGGGCACCC
AAAGAAGGCGGTAAGCCTAAAGCACGACACGGACCTAGCGCCaagtggag
cttttaatttctttttaaataaaggtcattatcagtgtagctggaacctc
gatattccaggattagaaaaagctatgtacctgttatcttttttctttaa
agaatcaacaagccatcaacatcaataaattacacacatttactcagaga
aacttttaaaattatctgccattacgactttcttgaagccgttccgaaat
taaccaatcgggttaggtatcggaattcctatgggagNcgactttcttga
agccgttctgaaatgaaccaatcgggttattaatcggaattcctatggga
gttcttttccgaaatttgtaaaattgctaagtcggcaaaaaaaattttcc
cgggggtttgagggaaaaacagaactgctctcatttgttttttatttaac
cagatatttaaatttgggctcaaaaatatttaaataaataagttaatagt
attcaatatactatttgtatctatcagaaaataaaacacttacagaacga
catcgtttatcatttggaatacccccgtatttggaccattctatggtggg
cgcaaaatagggtggaaactaagtagcacaccctcagtgcaagattgccg
cctcatctttattcgcccgcgcgagaatgcgagctaatcatttttttctc
gcgcgctcaaggggaaaaggaaagtgatcgatattctttgaaggaaaaac
gtcaggaacaaacccaaagaccaaaagatgtattttgttgttgacaatcg
atcctgtgaagatgaaaaaatttctgctttgcgtttttttctgaacgctg
aaaaactctaatttcgatcatcCTTTAagataaagaggttgcgagatttg
ggttagaggcaaaaattgctaaaaagctggtaaaatcgtaatcctcaaaa
atcgatgttccagcctcactgattatctaaaagaacacatacacgGCATG
GGTACAGCCAAGTACAGACTTTGCAACCAgttccatcaatatgccaaaaa
aaatttgttcaaccgtaccttcacttcaagataggccaccatagaatgaa
cttccttttatatgatgaaccatattcatgtggctttcagccttgcactc
catcgcagaggctaatcaattttaatttttttatatttgagtattaaaaa
ggcatgcattcaaataataaaggtttaaaatttttctctgggctagttag
taaaatatttcaaataggCTCTGTTTCACGAATGTTTATCATCAAATTTT
TACCAATAAAATTCTATCAATAAGTCTTTGTTTTGGATCAAAagcctttt
tttaatttaaatgttataccgggtgcaccaaaaaaaagtatacaggtttc
tcgagatattgtgagcttcagaatttaaattttttgttcattcttttttt
attgtatagaggatgctctaacttgaattttgagctattatacattaaat
ttgaaaaacagttcgaaagttatttccaaaaaacttgtatactttttttt
ggtgcacccggtaaaTGTTTTATCCCATTCTTTAtatgtcaaaacaaaaa
agcaaaCATGAATCAACAttagaaaaaagatttgaaataatgaaatatat
gaaatatattgaaaacaCATTTCTCACACAAAGGAACatcatctatatat
taatagccgtgcTCTGTAtgctgtgtgtcaccactttcctTTTctcaagc
aatgttttgttttctctttgtTATCATTGCATAAAAAAGTGGCCTTAATT
ATCTAACTCAGCACAGAGGCAACACCGATTCTGCCGCTTCTTTTTACCCC
TGAATATTATCTTTAAATTGTTAATTCAATATTATCGATTAACTGTTGAA
AAGGAGATCAGGAAGGTTACATAATGGAAAATTGGTGGAATATGACAGcc
aaaaatcttcaattatGTCTATTTCCAATActgtagtttttttttttaat
tttgcgaaagagactgcaatgacttcttctcaAAAATGCTAATAGTAATA
TCcacgctttcgttttcaactgATCTACACTATAAAAGCTCTAAAAGCcc
atattttaaaatttcgaaaagaccATTCTGCAGCTAATAGAAAACGATGC
TTTTagcttactcttaggtgccaaataaatgccccccccccacttgttaa
tttttcgatatattatatataattttccaacccccctggaccttattagg
acccccccgtttattaatttttaagaatattttcagttggcaaaaagaag
tccccttattttgctccaaaatgcctgattttagcctatatttaccccat
ttttgggttttcagaagtacaattgccaacccccccggcaattaggtccc
ccccgtttattaaaatttcgaacattttccaaccaccccgtttattcgag
ccctcccgtttatttggcacctaagagtaacttGGTTCAATGCTGCCATC
CCGCATCCCATTCTGatacccttctttagagataaaGTCAGGCAGCTGGG
GTCACACAAAAAAGCCCTTTACGCTTTACTTACAAAGTTTGCGAACAAAC
TTCTGTTGgttgtattgaataaatattgacAACCGGACACTTTGAAATTA
TTTACCGGGGGCGTCCGGGAACAATCgtgtttttgatgacgtcaccagca
aaacgaaaaattttatgaaagaaaataTGAACATATTATACACCAATCAA
TAATCATCAACATTTAAAAATTTGCTTACAAAAAGTTATAACGGTTTgta
attttgatgacgtcacaattaCCCTTTTTTCTGAATCGATTTTCTGACTT
AAGTTGCTAAATCGTATATATCTACTTCGTACTAAAAAGTCTTTTgtatc
gatttttgagagctttcgaatggtggTATTgggttttcattttgaagagt
ttggattttcagattttttgcttcTCGAACCAGGTAAAAGTGATGTTGCG
GTCGTTATAGAAAACTTTGTAACTTTTTATAGAGAAATTCTCACCTATGG
TTACTGAgctttttcttgaaatctaCGTTTGGAGACGCTTcttttggtat
ataatatgatCATGTTTGCTAACGGAAATCTTTTAGTTTAGCTCAGGCCT
ATATGAGTTGATAAAttggtaaaaataaaataagttgAAAATCTGGTGAT
TGTTGAGAGCcaaaaataggccaaaataaAGAATACAGTTTCAAAATAGA
TAAGAAATATAAGATATATAATAATTATGTTGAGTTTAGGATGCTCACCC
CAAAATCAAACAAACCAGAATGACAGGAGActgcaaaatctcaaaaatgt
aGGCCTGCTGAAGCAGGTAGAATCAATAACCTAAAATCCATACGAATTTT
CTAGTTCCAGAACAAATTTATTTCTATCtagttcaaattaaaaaaatgtg
cccaaatttcatccaaaaatagtttttttggcatttctgaaaaatcagat
gccattaattttttctgatttttgtttaAAGGTAGGAAGGGTACCATCAT
AATTCATATTTGAAGTTAAGATATTGTAACAaatttatgattaaaaaaaa
atgagtcTTTAGGACTCCAATATCTAAGCATGGTGTCAATGTTCTTAAAT
GATATCATTCATGCAAGGATGTATGCCTTTTTTACTTGAAACTGTTATTT
AAATATTATTTATATTTGAACATGAAACTTTGTTTGCTAGACATGGATTT
TAGTAGAGAGTGAGCCAAAATTTGAACCTTATTATAAGCACAACACCAAT
TATTTATTAAAAGCTTTCCTCGTTATTGGTTCAtggtatttttttattat
tagttttgatttccaTTGAAGAATAATTATATTCTGGCTTTCATGTTACT
AATTTTTAGCAcaaataagtaatagttatcacaAGGCacagagtacaata
tgagatatatttttcgagttcagaatTTTCGTCATATTCAATCAGATAgc
ttatatttttcatgttgatgataaAGGGTTAAGATTGTGGttgtaatttt
taataaatcaaacttttttggttaataaccaggtaggtcgattgaaatat
aaatttattttatagatagAACCGTACGATTATGGAATGTGAAAGATTTC
AGAGAAAAAGATCATAAGTGAGtatatagaattttttttgtagAAGAAGT
AAGTATAATTCATTCATGAATTCttgttaaattcaaaattatctttgttA
TTTTAATTTAATGGAGTACATATACATTTATAAGTGTCACAACTTTTGGG
AGcttaaaaattcaatatttttaaggaaatgGAAAAAGCCTATCGCAGAA
GGGATTTTTGACGAGTTATTACAGTATATGATATACTGTACAGTCCActa
tctctaattcgaacctctattatttgaGTTATTCTAACTATACTGGTCTC
CTGAGCTGAAAAGCGTCAATCGTCTTTTTTTCAAACAGGTATGGTCGAGG
TAATGTGGAATTTGATCATGCGTCAGATGTGGCATTTAGTCCAGATTCAA
GGTacaatttcttttttggacctaccgcgggaggtcctttaatttgaccg
ttgtccNCGATTATGGAATGTGAAAGATTTCAGAGAAAAAGATCATAAGT
GAGtatatagaattttttttgtagAGAAGTAAATATAATTCATTCATGAA
TTCttgttaaattcaaaattatctttgttattttaatttaattgaGTACA
TATACATTTATAAGTGTCACAACTTTTGGGAGcttaaaaattcaatattt
ttaaggaaatgGAAAAAGCCTATCGCAGAAGGGATTTTTGACGAGTTATT
ACAGTATATGATATACTGTACAGTCCActatctctaattcgaacctctat
tatttgaGTTATTCTAACTATACTGGTCTCCTGAGCTGAAAAGCGTCAAT
CGTCTTTTTTTCAAACAGGTATGGTCGAGGTAATGTGGAATTTGATCATG
CGTCAGATGTGGCATTTAGTCCAGATTCAAGGTacaatttcttttttgga
cctaccgcgggaggtcctttaatttgaccgttgtccgttcgtctgttaca
agcttttctcgggattggctcattagttttttttaatttttttcacaatg
atacaaaacagcaatgcctgaaaagtgacggagcccgatttttgaaaaaa
attttgggggggcaaatttgggccaaaaactacctaaaaaaaaggttttt
tggactttgtgcaaaattgcttcattagtttttcctgatttttggcagaa
agatagagtgcaaggtaccctaaaatgtggctgaagtaatttttctcggg
aaatttttttttgtccttaaatacggattttcgtaaatttgggccaaaaa
atacCTAAacataaggttttttggacttggtgcaaaattgcttcattagt
ttttcctgatttttggcagaaagatagagtgcaaggtaccctaaaatgtg
gctgaagtaatttttcttgaaaaattttatttcgtcgtaaaatacggatt
ttcgtttttttggggaaattcccttttaccattttcctgttagcagcttt
tctcgggattggctcattagtttttttaaatttttNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcttttctcggga
ttggctcattagttttttttaattttttgcacaatgatacaaaatagcaa
tgcctaaaaagtgacggagcccgatttttgaaaaaaaaatttgtggggca
aatttgggccaaaaactacctaaaaataaggttttttggactttgtgcta
aattgcttcattagtttttcctgatttttggcagaaagatagagtgcaag
gcaccctaaaatgtggctgaagtaatttttcttggaaaattttttttcgt
cNGGATTCTTCGATTtaggaggggttaagtggcttccaggctatattccc
agcggacccaaaattcataccatcacgccaattttttttcgatttaacac
catcacgcctgaaaaatttggTTCCAGGATGAAATTTCgctgaaaaaaca
acattttcttgttttgtaTACCATAAGCATAAGAATCGCATGTAGCGCCG
TCGTTTCACGAAAAATCTTGTGcaggttttgaaattttacagaccagaaa
actTATGGTTTATTCTATTTCTCAATATTTTACGATTTGGGTTGGACAGC
CTGCTAGTTTTTGCGCGTCAAAAGAccacaggctagtgagtttcataACA
TTTTTATTGGCTTGAtcaaagattacatcattttagaccaatgaaattCG
TTTAATGACATGTGGTTGGAGACAAATTAATATCAGCATAGTGAAAATTA
ACCCATCATAAAGGTAAAGTTGTATCATTCGCATATTATTTTCCATTCTG
GtctgcaattttttttcggtggGTAAACCATAAGGTACACCATTGCATGG
CCCCCGTCTCCGGGGGGGGCggggggccaggggggccatgccccccccca
atattttgaaaagtatttttttttactttgaaaaatctcatatataaagt
ttagaggggtgaaataagggcaaaaagtcgaaaattttcttcgtcgccca
accatggtgggtgacatatttttttggccccctcaattcgatgCGCACAC
CGGGGGCCATGtcaataccaatagtaaaatgtagaacacctacttttatc
tgattttgatcaacaggtaggtccattcagcatgttgcttgttttaattt
tctgtatactgtgtcccagaaaaaagtggACAACTTTTTATAtgaagtaa
aatcctcaaacCTCATCATCTAAACTGACCTTAGAATAATTAAAATGTAA
TTACaattctctgttcaatcaataATAGATATTCAATGTCCAAGATGACT
TtgtttttgagattgaaatattaTGTATAGAAGTTGTAGAATTTGGAata
aattttgaggattttactttatataaaaaatataaaaatttgataaaaaa
tactttttgggacacactgtctTGTAATTTGTGATTTTGAAGTCAAGAAA
TCAAGCCCCactttcaaaatcaacaaaacctGATTTGAATTTATTGGGCT
TTGGaacacccctgcctctgtgacccagtgggatccacctcactggccac
cccagtgaaatctttttccaaaaatggctcatttttcagccccactggac
aaATCACTCACCCCACTTGAATGTTGTAGTAAAAAGAACACcccattgaa
aatgataaaaagtttacaCATACCCCACTCGAAATGCCCTTATTTTAACG
TACCCCAGTagaacttttctttcaaaaaatcacccACTAGAATTTTCTCC
TTCCCTTCTTTAAAGGTGAAATGtctgaaaaagccaaaaaaatctgCTCG
CTTCGCTTGCTCGCCATCAAATGTTCCACTTCAATATATTAACTGTATTT
AACCAGACTTCTATGGTCATTGTCATGGTCATTgacattttaaaacgtgg
aaaatgCCAAACGAGAggggttgaaaatcaaaaaattctctgtcagcgCA
AACCACAGTTGTACTTTAAAGCTAGGTTATAGCCTGAAAAATTTTCGAGA
GGCTTTCTCACTTGCGTAGATACTGAAAGATACTAAAGACCTCTACTTAA
ACCATGTTGACTATTTAGTAGCATGTAAGAAGCAGATTTTGACTAACTCT
AAACCAAAAGTTAGCCAGTACCTTCCATCGCTAAAACACGAAAAAATCAA
GCGGTCTACAGTGTAACACACAGGCTAACCAAAATTTAGctcatgcaaaa
aattctttctcaccCCAGTGAATGTCAATGAAATTTTCGCCACCCCACTC
ACTTTCAGGTTTTTTGATTCTCACCCTATTGGATAATCAACGCCCACTgg
ggcacagagacaggggtgttttggaATCTGAATTGTTTTAtagatttgaa
ttttgtaaTTGTAAAGAAAATGTCATTCTTTTGTCTTTTAAACTGGTTGT
AAaattacagtcaactctctctaattcgaacttttatcattcgaatcttt
ctgtaactcGAATTAAAATATTGGTTGGTCCCCTTAGCTAGAAAGTGGTT
TAAGTtattctctgtaattcgaatcatTCTCTTATTCGAAGacatttttt
ggttttggtcGGATTacagagagtcaactgtatgttgttcttactttctt
tttcttttcagagcCTTTGTGGCATCGCTTGCAAACGAGCAGAAAATTCG
GGTCTTTAAAATAcacaaagagaaaaaagagaCTGGAAGCACAACTATGA
GTATTTCTCCagaatttgattttgataaaatccaCAAATCGGCAATTATC
TCAGTGGGTATTTCATCGACTGGAAAGTATATTATGACAGCTGATAAAGG
AACACAAATTATCATCTGGTCTATTAAAGGTATTTCCTTATTTCTTCTCT
TGTACTTACAGTATTTAGCGCaacaccaaaaatattgaaaatttagaGTG
CCACAAAAATACTAGATAAAGCTATTCTGTCTCAGACTGACACAAAATAA
TGCACCATTTTTAAAAGTAGCCAACAGTTCGGTGCCGGCAAGTTGATCAA
CCTGCGGTCTACTCAGGAAAGGAGGTACATTATTTTGTTTCAACTGACCT
GGCTTGAGAAAAACAGAGAAATGCTATATAGTGTTCTATATAAGAAATCT
GAGTTTAAAACATGTcattaaatataaattttgtgTGTTTTGTATTATCG
ATTTTCTCCATTCTTCACGACGCCCCTGTATATATGATaaccgaaaaaaa
aacttttttgtttatgaatagaattttctttattttaggtGAAGTGTATG
ACAAGATTGATACTTTATTGATGTACAACACGTTTGCAAGTATCTCGCCA
TGTGGAAACCTGGTGGCTGCATGTGGTATGGTTCTTacaaccttttttta
aatcatgatACGTGTTGGGAAtgttttttgttcattttttttttgttttc
atttagataaaccttttcataaattacgtcacgagcaacccttacctcgt
tttcaaaatattgctatgggaATTGATTCCCAAACGAGTTCATGAGAAGT
TAactctatttataaaagtatcactttaaAGACTCGAATTCAATCACCTT
GGTGATAAATTCAAAATGAGGtagtcgttgcactcaaaataatttatgaa
aggCCCGTTTATTGCTAATAAGATGAAAACNTCGTTGCACTCAAAATGAT
TTATGAAAGGCCAGTTTATTGCTATTAAGATGAAATCGGGTATGGAGAGG
aatatatttatattttcaacCCCCTTCTTGCAAACCCCAGTGGGAAGagc
ccactggaaaaattggccaaaatatcatccctggtggaaaattatcatcc
aatttttgtttccactgaaaataataaaaaaaaacaatcgtcactgcaaa
ataatttactattttccccatccccactgaattttcccCAGCCAttcaaa
atatgggaatattaaCCCCCACTGagtttttttctgttatttttatcccc
actgactgaaaaaatcctaccggctgtgtgagaagggggtgttatttttt
atgctttagatAAAATAGGCTAGTcataataaaaagaaatcttGTACCAG
GAAACACAAAAGTCGAACTAGCTTTATATAAAATTAATCAGTATTTTCCT
GACTCAAAACTATCCAAATATCTCAAAGAAAACGTTTTGTAAtccagtgg
agtctctttagcTGGAACCTCTATAATTCAAACAATATTTATGATAGCAA
TGCATTGCCATATTAACCTCTTACTCCATatctcaaaatttcaatcactc
aaacaaatttgtgttcccagtgcgtgttcgagttatggagaatcAACTGT
ATATACGACTTGTTTATGATTATTTCTTCAGGGTTTACATCCGAAGTGAA
ATTATGGCACATGCAATTTTCAAAGAGTGGTGACTTCCAGCAGGTaatat
ttcaattattttgatttttattccCGTCCCGATGAGTACTAAATCTCATT
TTGCCTATTCATTTTACTTCAGTCTTCACCAGATTTTTTAACTGTTCCCA
AGAATTTTCTGAGAATATACACTTTTGCGACAGATCAGGACAGATTCCAA
AAGTCACGAAATTTTGTACGCCGAAACTGCCCTTTGcgcttgtttttcat
tttttagggtGTTATCTTTCCTGTATCGAAAGTAAACTAATTTATATTTT
GTTCTCctttttgatagactttgaAAGCGTTCGAAATCAAAGGACATAGA
GCTGGAGTTCTTTCATTCTCTTTCACAAACGACTCAAAACGGTaaataat
caaattttcatGAACATTTAAGTTGAATTTTACCATGGTTTAGTTACAAC
CAAGTTTTTAATCTTTTAGAATTATTatctttcaaaattgaaaatctcaA
TTCTATTCTGTAGTTGTGATTGACACTCTTGTTTGAATGCAAAGGTAGAG
CATTGGGCAGTTGCGCCCTTCCCTTGCCTTCAAGTAGATAAACGGCTATC
GAAACAGAAGCCTTTGGGTTATCTCCGACTGCGCCTGTAGACTTACTTAC
CTTGCATATCTGAGCACAGACTATAATGTTGTTTTGAAGTCATTTTGCTT
ccaaaataaaataccttttaacagcgtaaaaatattcaaacttgtgttta
aatgaaaaacaaggaaaccaatgattttaaaactattttggTCGTCTTCT
TTCTAGTTTTGCAACAGCTTCAAAAGATGGAACCTGGAAAGTTTGGGATA
TCAATGGTAAGATATGGTTACCGTATCTTTTTGGAGATAATAAGTGTAAT
TTTGAAATAGCTGTATTGATGCCGTTGTTGCCCATTTACCAATGGCTCTA
TTCTGTAAACATTAGACTTTGggctttcaaaatttcaaacttttttttct
cgcAGAGGGGGTGGGGGTAGGGAGAAGACTTTGTCCCTTTGAAGAGGTAT
ACAATTAAAATAGTTGATAGCATTTCCCTAAAACAATAGTGTAGTTTTGA
AAGCCTAAAATTGATTGTTTACAAATTATAGGTTAGAACATGGACATGGT
TAGAATTAACGCCATTTGTAAACTGGATTGAAATCTTTTGGTCCTAGTTC
ATTCGCCTTTGTTATTTCcattttcaccccctggacatgAACACGGAAAG
TAATCAATTTAGCTCCCCTGGATAGTaaaatttacccctggacagTCTAA
GTTCACCCCCAGAGCATTGCAATTTTTTAGGACTTTTTCTTGACACCTTT
GCAATTCGATTTACAATacagattttttctggaagagcccattccaCAAG
GCGGCACAATGCCTAATATAATTTTTCCAGTCCGCGAGGCTTTAGTAATT
TTTGCATGAGCATACTATATGGATTGATACTAATTTCGTTTTCTCTTTTA
GTCAATTACCTGAAAAGTCAAGAAGCCTATTTACTAAGCACTGGCAATTT
TACCGGTTACGAAGAAGGCTTGAACGTCAACATTGCATTAACACATGATT
ATTTTACGGTGGCATTATCGGTTGGTTCGCATTTGAAATATTATGATTCG
AAAAGTGGTGAGATGGATAAAGAAATATTACACGCCCACCCCGGTAAGGA
TAAAATTTGTTatgtttcccaaaaaaaaaactgaatattttCTGTTGAGG
TCCAGTTCCTTCTGGGTCTAGCCAATATTCGCTAGATTCAATAGAAAATC
TGTCAAAagttaatgaaattttaaattaccgtaatattacgtcatgaata
tcacgaaaAGAGTTCGTATAAAACATTAGGTCATAAATTTCACGAAAAGA
GTTTGTATTCTTCTACATGACATTTGTATGGAGAAATATCTGGTCTCATT
ATACGTGTAATgaaagcgaccgtagtgcaaaGGTACTTGATTCACTTTTG
TTTGGTGCTCAGAAATTAAAAAGAGAGATCAAGGATAAGTGGAGCAATCG
AAtcaggagccttcgggtcgtcTCCAAATGCGGTCGCAGGCTTACTTATT
ACTTATACCGTGTTGTTCTTATCATATCTTAGGAAGCATATGTGCACTGC
GTTGGTATACAGACTCGAAAATGTTGGTCAGTTCAGGTGGTACGGATCGT
ATGCTTCGTGTTTGGGAAAACATACACGGTGCAAAAGCCAACTTGGctga
tttaaaagaaaaactgaagAGAACAACTTCTGCTTCAATTAAGGTAATTT
AAATGCTTGTTTGTATGAGTAAAGagtcaaacaaagattttaatGTCTCA
GTGAATTCCTGAGTTGATGAtaaaatcccgggggggggggNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNtttacaaaaaagtctcactaagggtaggaaatttttg
aaaatcagagaaaatttttcgaaaaagtctcactaagggtcactttttca
ctaaaatttggtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccgggataaaATAC
CTTCCATTTGGTTTGCATAAAGCGCCAGTAGCGTCCAGCAACGGTGTGCA
CGGCTTTGGTTTAATCCCTGACCGGGCCAATGCTTGTATAgaatatatat
ggtgaagatcagagatctgaccttaAGGAGAGCatgtgttgaaaatacta
aataaaataaaaatgaaacataaaaagggactaacatttttataattata
cggttttttctatttttcttttgaatttttctaaatatataaatcaaacc
aatcaagcATTTTGTCAAGAAATTTATGCGAAAAAGAGAGAGCCAACAAA
CCAACTAATATATcgatttttgtttacttttaggAACGGATCGAACAACA
GATAGAAGATTACACGTAAGTGCTTTCATAAAATGCAccccctgagctta
ggggggggtggctaaatcttttttcttgtttaaaggctatttttagaaaa
tattctAGGGTCTACCTCTATAAGGGGGGAGAGGGGCTACTATATTTTGA
GTAATCGAAATCGGAGCTGATttgataattcaaaaaaatttcaaatttcg
ataattaaaaaaaagtcaataCACTACAATTTTATTTAGCTTGtcctttt
tttagaatttagctTGGGTCTATTTTCATTAGCCGTCATTCAGGACTGCT
CGGAGATGAACCTTTCTGTTTCTGTGGCTATGTACCAATGTCCAAACTTG
TTCCCATTCtcaaattattgttttgattgagcAGGAGAAAGCCTAACAAC
CAAAACTCTCATTCAAAGCTTAAGGAGTCTGGTCCCAAATTATATGTGAA
TCTCTGAGCGGTTTTAAGTACATGAAATTCTTTCGGCTAATACCGGCAAA
TTTTACGGCATCGTTACGACTGATAGCACTTTTGTTGAGTCTGGTAATCA
TTGCTTGTATGGTTACAATACCAAAAGATTACTAGTATTCCTATATAAAG
CCATGGATGGAGAATGATTGGgctgttccaaaaaaaattccatacagggg
gtggacgaaccttttcaattcaaaacaaatttcttgaaaatgtgtggata
ccccctggaaaattgcaaaattttcaaaacactcAATTATTTTCACGTCC
TAAAGTGAAGCTGGAAGAACTAATATCAGTAGCTTACCCCCTGGAAGTTT
AAGAATAtccttttaccccctggaaaaatgaacaAAGACTTCTTTAGACC
TCCTGGAAAGGAtctaccccctggaaaagtttgtccaccccctgtatggt
tataaaatggaatggcccattgcaGGGTAGGGGTGGTAATCTTGAAAAGT
TGATAAATGAGATTTATTTTTGTGTAGGAGAACCAGCACTTAAAAttatt
ctttaaatttttctgttttttaggaaatttttgaagaaattcaacaaagt
aTAGAACTAGAAGAATAAATTGACTTTATAAActttatgtaatttttttc
cgaaatttaaatttgttttttatttattagttAGTTTATAAGGGTCTTAT
CTTGAAAAGGGTCTTTAATTTTTAGTCAAAGGTCTTTGAATCTATATACA
GTATCTAATATGTCTTCATAATGAAATCAAAACCGCTTTCTCTAACCGTC
GAAAGTTTCGTTTCGTGATTGCtctttttttgggtgatttttattttgtt
caaatcATCATGGTTTCATCTTCTTAGCCAATATTCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036690XLOC_036690Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058223-exon-scaffold_309-1491911889:251545..251966TCONS_00058223-exon-scaffold_309-1491911889:251545..251966Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:251545..251966TCONS_00058223-exon-scaffold_309-1510915933:251545..251966Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:251545..251966TCONS_00058223-exon-scaffold_309-1575043694:251545..251966Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:256710..256761TCONS_00058223-exon-scaffold_309-1491911889:256710..256761Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:256710..256761TCONS_00058223-exon-scaffold_309-1510915933:256710..256761Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:256710..256761TCONS_00058223-exon-scaffold_309-1575043694:256710..256761Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:257563..257625TCONS_00058223-exon-scaffold_309-1491911889:257563..257625Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:257563..257625TCONS_00058223-exon-scaffold_309-1510915933:257563..257625Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:257563..257625TCONS_00058223-exon-scaffold_309-1575043694:257563..257625Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:260906..261123TCONS_00058223-exon-scaffold_309-1491911889:260906..261123Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:260906..261123TCONS_00058223-exon-scaffold_309-1510915933:260906..261123Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:260906..261123TCONS_00058223-exon-scaffold_309-1575043694:260906..261123Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:261533..261619TCONS_00058223-exon-scaffold_309-1491911889:261533..261619Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:261533..261619TCONS_00058223-exon-scaffold_309-1510915933:261533..261619Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:261533..261619TCONS_00058223-exon-scaffold_309-1575043694:261533..261619Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:262626..262687TCONS_00058223-exon-scaffold_309-1491911889:262626..262687Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:262626..262687TCONS_00058223-exon-scaffold_309-1510915933:262626..262687Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:262626..262687TCONS_00058223-exon-scaffold_309-1575043694:262626..262687Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:262962..263035TCONS_00058223-exon-scaffold_309-1491911889:262962..263035Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:262962..263035TCONS_00058223-exon-scaffold_309-1510915933:262962..263035Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:262962..263035TCONS_00058223-exon-scaffold_309-1575043694:262962..263035Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:263451..263500TCONS_00058223-exon-scaffold_309-1491911889:263451..263500Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:263451..263500TCONS_00058223-exon-scaffold_309-1510915933:263451..263500Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:263451..263500TCONS_00058223-exon-scaffold_309-1575043694:263451..263500Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:264146..264337TCONS_00058223-exon-scaffold_309-1491911889:264146..264337Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:264146..264337TCONS_00058223-exon-scaffold_309-1510915933:264146..264337Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:264146..264337TCONS_00058223-exon-scaffold_309-1575043694:264146..264337Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:264777..264937TCONS_00058223-exon-scaffold_309-1491911889:264777..264937Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:264777..264937TCONS_00058223-exon-scaffold_309-1510915933:264777..264937Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:264777..264937TCONS_00058223-exon-scaffold_309-1575043694:264777..264937Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:266128..266159TCONS_00058223-exon-scaffold_309-1491911889:266128..266159Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:266128..266159TCONS_00058223-exon-scaffold_309-1510915933:266128..266159Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:266128..266159TCONS_00058223-exon-scaffold_309-1575043694:266128..266159Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1491911889:267168..267483TCONS_00058223-exon-scaffold_309-1491911889:267168..267483Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1510915933:267168..267483TCONS_00058223-exon-scaffold_309-1510915933:267168..267483Clytia hemisphaericaexon
TCONS_00058223-exon-scaffold_309-1575043694:267168..267483TCONS_00058223-exon-scaffold_309-1575043694:267168..267483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:251545..267483 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00058223 vs. Swiss-Prot (Human)
Match: TBL2 (Transducin beta-like protein 2 OS=Homo sapiens GN=TBL2 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 4.475e-107
Identity = 166/381 (43.57%), Postives = 246/381 (64.57%), Query Frame = 2 
Query:  239 PNTSNSQKKLRN--PVSKKKVQQNLNDNGINHPYLISSLKGHTGPITSLDFSDNGKLLASSSEDRTVRLWNVKDFREKDHKYGRGNVEFDHASDVAFSPDSRAFVASLANEQKIRVFKIHKEKKETGSTTMSISPEFDFDKIHKSAIISVGISSTGKYIMTADKGTQIIIWSIKGEVYDKIDTLLMYNTFASISPCGNLVAACGFTSEVKLWHMQFSKSGDFQQTLKAFEIKGHRAGVLSFSFTNDSKRFATASKDGTWKVWDINVNYLKSQEAYLLSTGNFTGYEEGLNVNIALTHDYFTVALSVGSHLKYYDSKSGEMDKEILHAHPGSICALRWYTDSKMLVSSGGTDRMLRVWENIHGAKANLADLKEKLKRTTSAS 1375
            P+ S+  KK +    + K+K QQ+       H  L ++LK H+G I+ +DFS NGK LA+ ++DRT+R+W+ KDF +++H+  R NVE DHA+ V FSPD RAF+  LAN   +RVFK+   K+E G  T + +PE DF K HK+ +I +GI++TGK+IMTA   T ++IWS+KG+V   I+T  M NT A++SPCG  VA+CGFT +VK+W + F K G+FQ+ ++AFE+KGH A V SF+F+NDS+R A+ SKDGTWK+WD +V Y K Q+ YLL TG F          +AL+ +   +AL+ GS +  Y+++ GE ++     H   I  L +    + L S G  DR +R++ N  G +A + +++  LKR ++ S
Sbjct:   52 PDKSSGSKKQKQYQRIRKEKPQQH----NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQREHRSMRANVELDHATLVRFSPDCRAFIVWLANGDTLRVFKM--TKREDGGYTFTATPE-DFPKKHKAPVIDIGIANTGKFIMTASSDTTVLIWSLKGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEVCFGKKGEFQEVVRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDVEYKKKQDPYLLKTGRFEEAAGAAPCRLALSPNAQVLALASGSSIHLYNTRRGEKEECFERVHGECIANLSFDITGRFLASCG--DRAVRLFHNTPGHRAMVEEMQGHLKRASNES 423
The following BLAST results are available for this feature:
BLAST of TCONS_00058223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBL24.475e-10743.57Transducin beta-like protein 2 OS=Homo sapiens GN=... [more]
back to top