TCONS_00058159 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058159
Unique NameTCONS_00058159
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2099

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058159 ID=TCONS_00058159|Name=TCONS_00058159|organism=Clytia hemisphaerica|type=transcript|length=2099bp
GTTGTCTCGGACAACGCCGGAACAGCTAGTTTATCATAATGTATTgattc
attttgtttttatcacaGAAAATAGTtgaattaaaatatttaaaaaaatg
ttcaaatcaaaaaaaattgacaagtGTGATATTCAGTTCGAAAATGATCG
TCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTACACA
TGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGAAAG
ACCAAAACAGAATGGATAGTACCTTACATTGATAGTGAAACTCAAGAACC
AAAAGAAAGAGAACACAAAAGCAAACATAAATATTtcgagaaaaagaaga
aaatatttgGGGAAGATGACAATGAGAAGCGAGACCAAGATGCTGGTGAG
CATGAGTTCGATTTTGAATTCCAATTACCCAAAGATATTCATTCATCCAT
TCAACATGAGAACGGATTCATACAATACAGTGTAAAAGTCATTATCAAGA
AACCATGGAAGAAAGATCTGAagttgaagaaaatgtttgtcGTCAATCAA
CTTCATGATGCAAATGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGA
TGAAAAGGTTTTGGGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGA
AAGCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTG
ACAGCTAAATGTGAAAACAAATCAGATCGAGATATGGAAGAATTGGAGGT
GGAATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAG
ATAGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAgcaaaaag
atCAAAGGAGGAGACGAACTAGAATGGAAAAACAAACTAATGGATATCCC
TGCTCTCCCTCTCACAACAAACAGCAAATTTATTGACGTCAAGTATTACG
TTCGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTT
CCCATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACC
ATTAGAACGACAGACCAGATTTAAGCCCAAAGCGCCAGAAGGTATCGGTT
ATTCAGACATGGATTTCTTGAATCATCCAGACATGTGGCCTTTCCAATTT
TCACAAGTTAAAGGAGATAAACCTAAGAAGATGAACAAGAAAGATGATAA
AGAGTTTGCCGATGATTTTTACATCCCCGTTTACACTTTCGCTTTCCCTG
TCGAGGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGGTGGTGGT
TCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCGCCCATTGAATA
AAGATAGTTTTACTAATTGTGGTGACAGGTACCAACTGCATGGATTGGTT
CACTGGATGGAATAGTTCCTGAATCCTGATTGGTTGCACATAAGGGTGTG
TCATCAAAGTCACCTTAAATAGAGAGTTCAATCTTTCGATGTATAACGAT
CAACCcattaaggcttggggacacgagaagttattttcgcgttggtgcaa
tacTTTATCCcgccaacacaagaaaaaaagtgcgttccccatggtttttt
gtttttgtttcatgggacaaaaagtgagggaaatacccaaaagacacgct
gctTTTgcccctgggacaatggagcaaaattgattcgaattaATTTTGTT
CCactgtcccagggacaaaagtgagatttcacttttattggtcgaaagaa
aaatggggtgaagacacgagaaagcgtttcaggttggtgagATGAAGTAT
GTTGCATTGCACTAatgcgaaaaaaaacttcttgtgtccccaagccttta
tacagtatttttttaggaagatttgtattttctttttcttcataccTTAC
CCTGTTTATTGACCGACTcattttttgggggaaattttttatatatataa
atgaaatgaaatgatttATTCGTGGCTTATTTTGTATGTAATTGTAATGT
TTATAACTAACCCTTTTAATCACATGCACATTTATATATTACATTTTTAA
TGATACTGTTTACAACTATTCATACACAACATATCCTTAAATTATCTCN
Run BLAST on NCBI

protein sequence of TCONS_00058159-protein

>TCONS_00058159-protein ID=TCONS_00058159-protein|Name=TCONS_00058159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MFKSKKIDKCDIQFENDRLVFYPGEKLRGKFILHMNRSMPMERIMVVCKG
KTKTEWIVPYIDSETQEPKEREHKSKHKYFEKKKKIFGEDDNEKRDQDAG
EHEFDFEFQLPKDIHSSIQHENGFIQYSVKVIIKKPWKKDLKLKKMFVVN
QLHDANDQKYNFAPGEEDEKVLGCLCCASEPISLKAHINRSAFCPGDRIM
VTAKCENKSDRDMEELEVELIQVLEFKAHNEDFGDSYRTLTNKVAEVESK
KIKGGDELEWKNKLMDIPALPLTTNSKFIDVKYYVRVHLDIPMAIDMEFK
LPITMCSVPFKPTYQDAPLERQTRFKPKAPEGIGYSDMDFLNHPDMWPFQ
FSQVKGDKPKKMNKKDDKEFADDFYIPVYTFAFPVEGMDNPHPPSQPSGG
GSATSVKTNSSEMPPIE
Run BLAST on NCBI

transcript from alignment at scaffold_307:141209..145926-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058159 ID=TCONS_00058159|Name=TCONS_00058159|organism=Clytia hemisphaerica|type=transcript|length=4718bp|location=Sequence derived from alignment at scaffold_307:141209..145926- (Clytia hemisphaerica)
GTTGTCTCGGACAACGCCGGAACAGCTAGTTTATCATAATGTATTGATTC
ATTTTGTTTTTATCACAGAAAATAGTTGAATTAAAATATTTAAAAAAATG
TTCAAATCAAAAAAAATTGACAAGTGTGATATTCAGTTCGAAAATGATCG
TCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTACACA
TGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGAAAG
ACCAAAACAGAATGGATAGTACCTTACATTGATAGTGAAACTCAAGAACC
AAAAGAAAGAGAACACAAAAGCAAACATAAATATTTCGAGAAAAAGAAGA
AAATATTTGGTATGATTTTTTCAGTTCATGGCTTTTGCACAAATTTTGGA
TGAACTAATAATTTTGGCTGAAGTTAGAATTTAAGCACCCTCTAGTTGAA
AAAATATAAGTTGTGAACAAGAGTCTTGGTAGTAACGCCATTCCTGAAAA
AGTGTTAATGTATGTATTATTTTAAGATACATCAACCCCCTTGAATTCCA
GGAAGTTTTAAGTTTAAACTCCACTGAAATCCTGAAAACTTTATAGGAAC
TAAAGGATATCTCCCATTGAATTCCAGCTAAAATTTCTGTTTGTTTTGTG
TGTGTTTCCCCAAGAAATTGGGTTGTACCGGGTGCACCACAAAAAAGTTT
CTCTCTTTAAAGTGAAATTTCCCGAGATCTAAAATTTTTGAAAGAACGAA
TCCTTTTCCATCCATTGTAAAGAAGAAAGATTAACTTAGGTTTTGATGGG
TCATTTATTAAATTTGGTTCATTAGATCAAAAGATATGCTGCATTGAATA
AAAAGGTTACTTGCAGAAAGTGCTCGAAAACTTTGAAAATCGACCTATCA
AATTAAATAGAAGCACCCGGTATGTAGTTCAAGTAAGACTTCATTTGAAT
TAAGTTGATAAGTATACGTCCAAATTTCTTCCACAGCTTTATTATGATGA
TTTGACTGCTCTTTTTGAATAGGGGAAGATGACAATGAGAAGCGAGACCA
AGATGCTGGTGAGCATGAGTTCGATTTTGAATTCCAATTACCCAAAGATA
TTCATTCATCCATTCAACATGAGAACGGATTCATACAATACAGTGTAAAA
GTCATTATCAAGAAACCATGGAAGAAAGATCTGAAGTTGAAGAAAATGTT
TGTCGTCAATCAACTTCATGATGCAAATGATCAAAAGTATAATTTTGCAC
CTGGAGAAGAAGATGAAAAGGTTTTGGGTAAGTTTGAACTCCTCATTGAT
CTTCATCTTCATCTTCATGTAAAATGTTGAACATATTGAGACAATTTATT
TCTTTCATNGTAAAATGTTGAACATATTTTGGCAATATATTTCCTTCATC
ATGTTTATTCTACCTAAGTTACCTGCCAAAAGGCCTACATACACTACACA
ATATATTGTCAGACAATGCTGAATGCCGGAAATATATTGAACAGGTGTCC
GCAATATAATTGTCAGCTCGATTTGCTATATAGTCTACTCCGTACATTAC
GGTCCACAAACCATTATTGTCGAAAATTGCTCACCAATATATTGTGTAGT
CTAAGTAGCCCTTAACGTAAAAGTTAAGGTCATGCTTTTGGTTAGATATT
ATCCTTTTAAATACGCATGTTATCAGAGGGAGAGAGGAATCTACAGATAC
TACGACTACTAGGCTCCATCTATTCTTCTATTCTTTAACTTGAAACCTTC
TATTTCCAGAATCTTCATCTGTTTTTTTTATCTTAATTGAATGGACACAT
TTCACTTTGCAGGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGAAA
GCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTGAC
AGCTAAATGTGAAAACAAATCAGATCGAGATATGGAAGAATTGGAGGTGG
AATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAGAT
AGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAGTAAGTTTCA
AATCTTGTGATTAAAACATTAATTTTTGACCTTGAATATTTGTACTATGT
CTTTTAGTGAAAAAGAATTTGGTACAATATAGTCAAAGATTATGTTGTTA
GTTCCTAATACACTTATCCACCTTTAGCAGCGCGGTCGGCTTTTTGTTAC
TTTATCGCTTCAATGCAAGGATATCTTTCATTTTACACAAGAGCACTCCT
TCACTTGTGTTTTCGATACCATCGTCGAGAAGAATTTTACTCGTATTTTC
TTTACCCGTCTCCTCCACCTCGCTAAGGGTTGTTAGTTTTCAATTAACGT
ATAAAAGTATTCACGTGGTGATACGAAATGGTACGTGTACCAAAAAGACC
TCTCTTATACTTATCTTCACCATTTTTTTAGGCAAAAAGATCAAAGGAGG
AGACGAACTAGAATGGAAAAACAAACTAATGGATATCCCTGCTCTCCCTC
TCACAACAAACAGCAAATTTATTGACGTCAAGTATTACGTTCGCGTGCAT
CTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCCCATCACTAT
GTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCATTAGAACGAC
AGACCAGATTTAGTGAGTTTCNCTTTCAAACCTACCTACCAAGATACACC
ATTAGAACGACAGACCAGATTTAGTGAGTTTTTCTTAGTAGAGGCAAAAC
TTTACGAATTTACAGCGCACACATTTTTTACCCTATCTTAATGACTGCAA
ACATAATATCTATTTGTCTTTGAATTCGAAATCATATAATATTTTTGAAG
ATATAACATCTATCAACTAAAGGTTGTTTGTTTCGATCCTCCGTCTAATG
TATTGCACTGCAAACATAGATTTAGTCTCTACCTCTCTAGGGAAATCACC
AGAGGCACAAAGTCCTACCTTTTTGGACTTAGGGAGAAGTCATTTGGGAT
ATTAGCATGGTGGTAGCGACCAGTTAATTATCTCTTATCGTTTTTTCATA
TCTTACAGAGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGACATGGATT
TCTTGAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGA
GATAAACCTAAGAAGATGAACAAGAAAGATGATAAAGAGTTTGCCGATGA
TTTTTACATCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGTAAAAATAT
ATAGTTGACTCTCTCTAATTCGATCTTTAAGGGATTAAAGATTTCTTTCG
GGAGTAGAAAAAGGATTCTAATTAAGAAGAGTAATTTTAAACCACTCTTC
AGCTGAAGGGATCGATATTTTAGTTCGAATTACAGAAAGATTCGATTAAT
GGAGATTCGAATTAGAGAGAGTTGAATGTAATTTTGATATAAAACATACT
TTAAGAGTTACCGTACTCCTGAAGATTTAGGATACTTGACCCCTCAGATT
TTCGAACCACTTTTTGGATACATACCATTGGTTTTTTATGGGTCCTCTGG
ACTTTATCAGCTTACGCCCTGCATTTTTTAATGTTTATGATGTATTCAGT
GTAGCATAGTAAGGCTATTTTAATTGGGACAAAATTTACGCTTAGCTTAT
ACACCTTTTCGACCGTAGCCGCCAATTGACGCGCGGGCATTATTTTGTCC
GTTTTACCACCCGAAAACCGTCCCAGTCTTTTTTTCGCACCTATATACAA
TAGAAATAGGTGTCAAAAAATGATTGGATTGAGTTTAGGTGGATAATTAA
ATAATCAAGTGGCACGCGTCTGACCGTGCGACTACGATCGAAAAGGTGTA
TTACTTGGATATTTCCTACTTTAGGGTATGGACAATCCACATCCGCCCAG
CCAACCTTCAGGTGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCG
AAATGCCGCCCATTGAATAAAGATAGTTTTACTAATTGTGGTGACAGGTA
CCAACTGCATGGATTGGTTCACTGGATGGAATAGTTCCTGAATCCTGATT
GGTTGCACATAAGGGTGTGTCATCAAAGTCACCTTAAATAGAGAGTTCAA
TCTTTCGATGTATAACGATCAACCCATTAAGGCTTGGGGACACGAGAAGT
TATTTTCGCGTTGGTGCAATACTTTATCCCGCCAACACAAGAAAAAAAGT
GCGTTCCCCATGGTTTTTTGTTTTTGTTTCATGGGACAAAAAGTGAGGGA
AATACCCAAAAGACACGCTGCTTTTGCCCCTGGGACAATGGAGCAAAATT
GATTCGAATTAATTTTGTTCCACTGTCCCAGGGACAAAAGTGAGATTTCA
CTTTTATTGGTCGAAAGAAAAATGGGGTGAAGACACGAGAAAGCGTTTCA
GGTTGGTGAGATGAAGTATGTTGCATTGCACTAATGCGAAAAAAAACTTC
TTGTGTCCCCAAGCCTTTATACAGTATTTTTTTAGGAAGATTTGTATTTT
CTTTTTCTTCATACCTTACCCTGTTTATTGACCGACTCATTTTTTGGGGG
AAATTTTTTATATATATAAATGAAATGAAATGATTTATTCGTGGCTTATT
TTGTATGTAATTGTAATGTTTATAACTAACCCTTTTAATCACATGCACAT
TTATATATTACATTTTTAATGATACTGTTTACAACTATTCATACACAACA
TATCCTTAAATTATCTCN

Coding sequence (CDS) from alignment at scaffold_307:141209..145926-

>TCONS_00058159 ID=TCONS_00058159|Name=TCONS_00058159|organism=Clytia hemisphaerica|type=CDS|length=7524bp|location=Sequence derived from alignment at scaffold_307:141209..145926- (Clytia hemisphaerica)
GGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGGTGGTGGTTCTGC
CACCTCAGTCAAAACAAATAGCTCCGAAATGCCGCCCATTGAATAAAGCC
CAAAGCGCCAGAAGGTATCGGTTATTCAGACATGGATTTCTTGAATCATC
CAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGAGATAAACCTAAG
AAGATGAACAAGAAAGATGATAAAGAGTTTGCCGATGATTTTTACATCCC
CGTTTACACTTTCGCTTTCCCTGTCGAGGCAAAAAGATCAAAGGAGGAGA
CGAACTAGAATGGAAAAACAAACTAATGGATATCCCTGCTCTCCCTCTCA
CAACAAACAGCAAATTTATTGACGTCAAGTATTACGTTCGCGTGCATCTG
GACATCCCGATGGCGATAGATATGGAGTTTAAACTTCCCATCACTATGTG
TTCTGTACCTTTCAAACCTACCTACCAAGATGCACCATTAGAACGACAGA
CCAGATTTAGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGAAAGCA
CACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTGACAGC
TAAATGTGAAAACAAATCAGATCGAGATATGGAAGAATTGGAGGTGGAAT
TAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAGATAGT
TATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAGGGAAGATGACAA
TGAGAAGCGAGACCAAGATGCTGGTGAGCATGAGTTCGATTTTGAATTCC
AATTACCCAAAGATATTCATTCATCCATTCAACATGAGAACGGATTCATA
CAATACAGTGTAAAAGTCATTATCAAGAAACCATGGAAGAAAGATCTGAA
GTTGAAGAAAATGTTTGTCGTCAATCAACTTCATGATGCAAATGATCAAA
AGTATAATTTTGCACCTGGAGAAGAAGATGAAAAGGTTTTGGATGTTCAA
ATCAAAAAAAATTGACAAGTGTGATATTCAGTTCGAAAATGATCGTCTTG
TGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTACACATGAAC
AGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGAAAGACCAA
AACAGAATGGATAGTACCTTACATTGATAGTGAAACTCAAGAACCAAAAG
AAAGAGAACACAAAAGCAAACATAAATATTTCGAGAAAAAGAAGAAAATA
TTTGGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGGTGGTGGTT
CTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCGCCCATTGAATAA
AGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGACATGGATTTCTTGAAT
CATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGAGATAAACC
TAAGAAGATGAACAAGAAAGATGATAAAGAGTTTGCCGATGATTTTTACA
TCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGCAAAAAGATCAAAGGAG
GAGACGAACTAGAATGGAAAAACAAACTAATGGATATCCCTGCTCTCCCT
CTCACAACAAACAGCAAATTTATTGACGTCAAGTATTACGTTCGCGTGCA
TCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCCCATCACTA
TGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCATTAGAACGA
CAGACCAGATTTAGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGAA
AGCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTGA
CAGCTAAATGTGAAAACAAATCAGATCGAGATATGGAAGAATTGGAGGTG
GAATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAGA
TAGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAGGGAAGATG
ACAATGAGAAGCGAGACCAAGATGCTGGTGAGCATGAGTTCGATTTTGAA
TTCCAATTACCCAAAGATATTCATTCATCCATTCAACATGAGAACGGATT
CATACAATACAGTGTAAAAGTCATTATCAAGAAACCATGGAAGAAAGATC
TGAAGTTGAAGAAAATGTTTGTCGTCAATCAACTTCATGATGCAAATGAT
CAAAAGTATAATTTTGCACCTGGAGAAGAAGATGAAAAGGTTTTGGATGT
TCAAATCAAAAAAAATTGACAAGTGTGATATTCAGTTCGAAAATGATCGT
CTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTACACAT
GAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGAAAGA
CCAAAACAGAATGGATAGTACCTTACATTGATAGTGAAACTCAAGAACCA
AAAGAAAGAGAACACAAAAGCAAACATAAATATTTCGAGAAAAAGAAGAA
AATATTTGGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGGTGGT
GGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCGCCCATTGA
ATAAAGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGACATGGATTTCTT
GAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGAGATA
AACCTAAGAAGATGAACAAGAAAGATGATAAAGAGTTTGCCGATGATTTT
TACATCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGCAAAAAGATCAAA
GGAGGAGACGAACTAGAATGGAAAAACAAACTAATGGATATCCCTGCTCT
CCCTCTCACAACAAACAGCAAATTTATTGACGTCAAGTATTACGTTCGCG
TGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCCCATC
ACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCATTAGA
ACGACAGACCAGATTTAGCTGTCTTTGCTGTGCGTCCGAACCCATCTCAT
TGAAAGCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATG
GTGACAGCTAAATGTGAAAACAAATCAGATCGAGATATGGAAGAATTGGA
GGTGGAATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTG
GAGATAGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAGGGAA
GATGACAATGAGAAGCGAGACCAAGATGCTGGTGAGCATGAGTTCGATTT
TGAATTCCAATTACCCAAAGATATTCATTCATCCATTCAACATGAGAACG
GATTCATACAATACAGTGTAAAAGTCATTATCAAGAAACCATGGAAGAAA
GATCTGAAGTTGAAGAAAATGTTTGTCGTCAATCAACTTCATGATGCAAA
TGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGATGAAAAGGTTTTGG
ATGTTCAAATCAAAAAAAATTGACAAGTGTGATATTCAGTTCGAAAATGA
TCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTAC
ACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGA
AAGACCAAAACAGAATGGATAGTACCTTACATTGATAGTGAAACTCAAGA
ACCAAAAGAAAGAGAACACAAAAGCAAACATAAATATTTCGAGAAAAAGA
AGAAAATATTTGGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGG
TGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCGCCCA
TTGAATAAAGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGACATGGATT
TCTTGAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGA
GATAAACCTAAGAAGATGAACAAGAAAGATGATAAAGAGTTTGCCGATGA
TTTTTACATCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGCAAAAAGAT
CAAAGGAGGAGACGAACTAGAATGGAAAAACAAACTAATGGATATCCCTG
CTCTCCCTCTCACAACAAACAGCAAATTTATTGACGTCAAGTATTACGTT
CGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCC
CATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCAT
TAGAACGACAGACCAGATTTAGCTGTCTTTGCTGTGCGTCCGAACCCATC
TCATTGAAAGCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAAT
TATGGTGACAGCTAAATGTGAAAACAAATCAGATCGAGATATGGAAGAAT
TGGAGGTGGAATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGAT
TTTGGAGATAGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAAG
GGAAGATGACAATGAGAAGCGAGACCAAGATGCTGGTGAGCATGAGTTCG
ATTTTGAATTCCAATTACCCAAAGATATTCATTCATCCATTCAACATGAG
AACGGATTCATACAATACAGTGTAAAAGTCATTATCAAGAAACCATGGAA
GAAAGATCTGAAGTTGAAGAAAATGTTTGTCGTCAATCAACTTCATGATG
CAAATGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGATGAAAAGGTT
TTGGATGTTCAAATCAAAAAAAATTGACAAGTGTGATATTCAGTTCGAAA
ATGATCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATC
CTACACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAA
AGGAAAGACCAAAACAGAATGGATAGTACCTTACATTGATAGTGAAACTC
AAGAACCAAAAGAAAGAGAACACAAAAGCAAACATAAATATTTCGAGAAA
AAGAAGAAAATATTTGGGTATGGACAATCCACATCCGCCCAGCCAACCTT
CAGGTGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCG
CCCATTGAATAAAGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGACATG
GATTTCTTGAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAA
AGGAGATAAACCTAAGAAGATGAACAAGAAAGATGATAAAGAGTTTGCCG
ATGATTTTTACATCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGCAAAA
AGATCAAAGGAGGAGACGAACTAGAATGGAAAAACAAACTAATGGATATC
CCTGCTCTCCCTCTCACAACAAACAGCAAATTTATTGACGTCAAGTATTA
CGTTCGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAAC
TTCCCATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCA
CCATTAGAACGACAGACCAGATTTAGCTGTCTTTGCTGTGCGTCCGAACC
CATCTCATTGAAAGCACACATCAACCGGTCAGCATTTTGTCCTGGAGATC
GAATTATGGTGACAGCTAAATGTGAAAACAAATCAGATCGAGATATGGAA
GAATTGGAGGTGGAATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGA
AGATTTTGGAGATAGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTG
AAAGGGAAGATGACAATGAGAAGCGAGACCAAGATGCTGGTGAGCATGAG
TTCGATTTTGAATTCCAATTACCCAAAGATATTCATTCATCCATTCAACA
TGAGAACGGATTCATACAATACAGTGTAAAAGTCATTATCAAGAAACCAT
GGAAGAAAGATCTGAAGTTGAAGAAAATGTTTGTCGTCAATCAACTTCAT
GATGCAAATGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGATGAAAA
GGTTTTGGATGTTCAAATCAAAAAAAATTGACAAGTGTGATATTCAGTTC
GAAAATGATCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATT
TATCCTACACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTT
GTAAAGGAAAGACCAAAACAGAATGGATAGTACCTTACATTGATAGTGAA
ACTCAAGAACCAAAAGAAAGAGAACACAAAAGCAAACATAAATATTTCGA
GAAAAAGAAGAAAATATTTGGGTATGGACAATCCACATCCGCCCAGCCAA
CCTTCAGGTGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAAT
GCCGCCCATTGAATAAAGCCCAAAGCGCCAGAAGGTATCGGTTATTCAGA
CATGGATTTCTTGAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAG
TTAAAGGAGATAAACCTAAGAAGATGAACAAGAAAGATGATAAAGAGTTT
GCCGATGATTTTTACATCCCCGTTTACACTTTCGCTTTCCCTGTCGAGGC
AAAAAGATCAAAGGAGGAGACGAACTAGAATGGAAAAACAAACTAATGGA
TATCCCTGCTCTCCCTCTCACAACAAACAGCAAATTTATTGACGTCAAGT
ATTACGTTCGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTT
AAACTTCCCATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGA
TGCACCATTAGAACGACAGACCAGATTTAGCTGTCTTTGCTGTGCGTCCG
AACCCATCTCATTGAAAGCACACATCAACCGGTCAGCATTTTGTCCTGGA
GATCGAATTATGGTGACAGCTAAATGTGAAAACAAATCAGATCGAGATAT
GGAAGAATTGGAGGTGGAATTAATACAAGTTCTTGAGTTCAAAGCGCACA
ATGAAGATTTTGGAGATAGTTATAGGACTCTCACGAACAAGGTCGCGGAA
GTTGAAAGGGAAGATGACAATGAGAAGCGAGACCAAGATGCTGGTGAGCA
TGAGTTCGATTTTGAATTCCAATTACCCAAAGATATTCATTCATCCATTC
AACATGAGAACGGATTCATACAATACAGTGTAAAAGTCATTATCAAGAAA
CCATGGAAGAAAGATCTGAAGTTGAAGAAAATGTTTGTCGTCAATCAACT
TCATGATGCAAATGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGATG
AAAAGGTTTTGGATGTTCAAATCAAAAAAAATTGACAAGTGTGATATTCA
GTTCGAAAATGATCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGA
AATTTATCCTACACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTT
GTTTGTAAAGGAAAGACCAAAACAGAATGGATAGTACCTTACATTGATAG
TGAAACTCAAGAACCAAAAGAAAGAGAACACAAAAGCAAACATAAATATT
TCGAGAAAAAGAAGAAAATATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036645XLOC_036645Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058159-proteinTCONS_00058159-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058159-exon-scaffold_307-1575043694:145568..145926TCONS_00058159-exon-scaffold_307-1575043694:145568..145926Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1575043694:144650..144904TCONS_00058159-exon-scaffold_307-1575043694:144650..144904Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1575043694:143887..144114TCONS_00058159-exon-scaffold_307-1575043694:143887..144114Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1575043694:143265..143495TCONS_00058159-exon-scaffold_307-1575043694:143265..143495Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1575043694:142687..142868TCONS_00058159-exon-scaffold_307-1575043694:142687..142868Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1575043694:141209..142052TCONS_00058159-exon-scaffold_307-1575043694:141209..142052Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:145568..145926TCONS_00058159-exon-scaffold_307-1510915933:145568..145926Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:144650..144904TCONS_00058159-exon-scaffold_307-1510915933:144650..144904Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:143887..144114TCONS_00058159-exon-scaffold_307-1510915933:143887..144114Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:143265..143495TCONS_00058159-exon-scaffold_307-1510915933:143265..143495Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:142687..142868TCONS_00058159-exon-scaffold_307-1510915933:142687..142868Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1510915933:141209..142052TCONS_00058159-exon-scaffold_307-1510915933:141209..142052Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:145568..145926TCONS_00058159-exon-scaffold_307-1491911889:145568..145926Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:144650..144904TCONS_00058159-exon-scaffold_307-1491911889:144650..144904Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:143887..144114TCONS_00058159-exon-scaffold_307-1491911889:143887..144114Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:143265..143495TCONS_00058159-exon-scaffold_307-1491911889:143265..143495Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:142687..142868TCONS_00058159-exon-scaffold_307-1491911889:142687..142868Clytia hemisphaericaexon
TCONS_00058159-exon-scaffold_307-1491911889:141209..142052TCONS_00058159-exon-scaffold_307-1491911889:141209..142052Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_307supercontigscaffold_307:141209..145926 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.14865	2.78301	2.0478	2.33338	91.6762	72.8098	51.7465	51.0333	37.6697	40.2915	28.9822	41.4336	12.7561	11.9112	5.40247	7.36149	3.31161	6.57387	23.8949	20.4717	6.51626	6.8854	4.32718	5.62154	6.87655	8.76538	11.6833	16.0586	2.23152	2.50205
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011022Arrestin_C-like
IPR011021Arrestin-like_N
IPR014756Ig_E-set
Blast
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BLAST of TCONS_00058159 vs. Swiss-Prot (Human)
Match: ARRD3 (Arrestin domain-containing protein 3 OS=Homo sapiens GN=ARRDC3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.092e-21
Identity = 84/308 (27.27%), Postives = 141/308 (45.78%), Query Frame = 2 
Query:  155 VFYPGEKLRGKFILHMNRSMPMERIMVVCKGKTKTEWI--------VPYIDSETQEPKEREHXXXXXXXXXXXXIFGEDDNEKRDQD-----AGEHEFDFEFQLPKD-IHSSIQHENGFIQYSXXXXXXXXXXXXXXXXXMFVVNQLHDANDQKYNFAPGEEDEKVLGCLCCASEPISLKAHINRSAFCPGDRIMVTAKCENKSDRDMXXXXXXXXXXXXFKAHNEDFGDSYRTLTNKVAEVESKKIKGGDELEWKNKLMDIPAL-PLTTNSKFIDVKYYVRVHLDIPMAIDMEFKLPITMCSVPFKP 1033
            V+  G+ + G+  L +   + ++ + +  +G  K  W           Y  + T+E +   HK           I  E D++  ++      +G HE+ F F+LP+  + +S +  +G ++Y VK  + +PW   +KLKK F V +  D N            EK L C  C S PISL A I R  + PG+ I + A+ EN S R M   +  + Q   F A  +      + +   VA +  + +  G    W  KL+ IP + P   +   I V+Y + V++DIP A+D+   LP+ + ++P  P
Sbjct:   23 VYSSGDTVSGRVNLEVTGEIRVKSLKIHARGHAKVRWTESRNAGSNTAYTQNYTEEVEYFNHKDIL--------IGHERDDDNSEEGFHTIHSGRHEYAFSFELPQTPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKTLCCWFCTSGPISLSAKIERKGYTPGESIQIFAEIENCSSR-MVVPKAAIYQTQAFYAKGK-----MKEVKQLVANLRGESLSSGKTETWNGKLLKIPPVSPSILDCSIIRVEYSLMVYVDIPGAMDLFLNLPLVIGTIPLHP 316
The following BLAST results are available for this feature:
BLAST of TCONS_00058159 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARRD39.092e-2127.27Arrestin domain-containing protein 3 OS=Homo sapie... [more]
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