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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058011 ID=TCONS_00058011|Name=TCONS_00058011|organism=Clytia hemisphaerica|type=transcript|length=486bp
TACTGATGGAAATCACTCGAAATCGAAAAGATGgacaatttttctcaaat
agGGAATAATTTTCCTTGGTAGAGGATGCCTTGAGCTGGACAAACACTCG
ATCAGTTGGATCCATGTGGTACAGCCCTGGGAGTTCGAGAATACCAAATC
CCAGGGCTTTACATGATCAAATTAAGAAGAGAACACAACATCGACTAATT
AGGATGAACGTTTAAACTTGCAGCTCAGtgGCTGACGGATACATTTTTGA
AAGGTGGGAAAACAGAGGCACTTTCCACACCTGGCTTGCaaaagaggaaa
gaaaaaagGAGACTGTACCTGGCTATTCAAACTGTTGAAGGGCTGCAAAC
TACAGTCAAGACATTCACTTCCTTGATGCAAGAGCTGCTTGTCGAATATC
CTGGATTTTACATTTTGGGTGGTCGTCTTAGTCAGCCAACCTACACTTAT
GGGCAGGTCGTtctgatttttctattgttaaattac Run BLAST on NCBI transcript from alignment at scaffold_303:3135..5952- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058011 ID=TCONS_00058011|Name=TCONS_00058011|organism=Clytia hemisphaerica|type=transcript|length=2818bp|location=Sequence derived from alignment at scaffold_303:3135..5952- (Clytia hemisphaerica)
TACTGATGGAAATCACTCGAAATCGAAAAGATGGACAATTTTTCTCAAAT
AGGGAATAATTTTCCTTGGTAGAGGATGCCTTGAGGTATGTATATCTGAA
GTTTCTAGTGTGGTCTGGCTCTTTTCACTNGGATGCCTTGAGGTATGTAT
ATCTGAAGTTTCTAGTGTGGTCTGGCTCTTTTCACTGTGGTCTGGCTCTT
TGAGTTCAGCCCATTTTTCATACTCAACTCGACTGATTAGGTTCAGGTTC
TTGTTGTCTTTCACTCTGTTTACGTTGATCAGCCAAAATTTGGCGGTGAA
TTTCGAGAAAGTTTGCTTCTTGATTTGCTTTTTTTATTACTGAAGGAAGA
GATGAAAGTCTTAGAAGTCTTTTTCTTCTTAGAAGGATTTGAATTTCATC
GAACAAACCTACTCTTTGGTTTGGCTTAGTAAAAACGTAGTGTAGATTAT
TATGCGGCCGGTGCATGATAAGCCAATTCATCATAAAAAGTAAGACCGTA
GAAAACTTAAAGAGGCAGCTTCTTTTGATGCTTTCAATGCAGTTCAATGC
TTTGAGAGTTGATGTTACTAATAGACCTTTTTTCAAAAGCAGAAAAACAA
TGATAAAACCATACATAATTATTACAATATGTATGATACAGTAATTATGC
ATGGCTCTATCATTATTTTTATGGCCGGACTACATAGTTATTCAACAGGA
CATCCTCTTTGAAAAAAGGTCTATGATTCTGTTGATTTTCATCCTGAGAA
AATCTGTGAAAAGTGTAGAGTTGTTTGTATGAAGTTTGAATCAGCGTTGA
AAGGCACCCAGAAGCACCCAAGCTGAACAAGTAGGAAGAAATAGAAAGTC
AAGCATAAATCAACACAGTCTGACAGTGTGTTAAAACAACAGCAACACCA
GGTATTGATACTGGTGGTTTCGCAGATTGTGTTGATGGAGAGAAAATTTC
ACAATATTAAAGAGACCGTGTGGCTTGTCTAATTATTGATGCTGATAACT
TTATATTTAGTTATTGGTTTTACTATTGAGTGAAATAAATGAGGAAATCA
TTAAGTTGGAAAGGCGATGCGATGAGGAGGGCCAACAAGCAAGACAATCG
ACCTCACATGTTTTAGCTTTTATTGTACTACTTACGAGGTATCTACACTG
GATTTACTTTTGTTTTTGTTTTTTTTCCCTACTGCATCTGCTTCAAGTGA
TGAGTTATTTCCTGTAGTCTGGGAGTTGTCTTGAGTTGTTGAAGTGTTGG
AATTATTGAGTTTGAAGGTCAGGTGTTTGGTATCTGATGGAGCATTGTAC
AAACCGTTCATTTTATAAACTCAAAGAATAAGGAAGATAAAGTCCATTTC
TTCAGTATTAATCTGATGTGCTTTGGATAGAAAGCTCTATTTCATTTGTG
AGTACAAAACAATTTTGAAAACTCTCACGGAAATAGAAGCACCAAAAACT
TTTGTAAATCAATGGTTTCCTTTGTCTATTATTTCCAGAGGATATATACC
TTAGATATTATTAATGATGATTTGTTTGAAATATTATTATCACTGCCAGG
TGTTGAAATTCAAAAAAATGATTGAAATTGTAAGGTCTAATTCCTTTCCT
TTTAGCTGGACAAACACTCGATCAGTTGGATCCATGTGGTACAGCCCTGG
GAGTTCGAGAATACCAAATCCCAGGGCTTTACATGATCAAATTAAGAAGA
GAACACAACATCGACTAATTAGGATGAACGTTTAAACTTGCAGCTCAGGT
AACTTCCATATTAACTCAAAAAATTTGCTTATGTTACTAATTATACAACA
GTTCATCATTTTTTATATTTTTCCTTCTTATTTTTGACCATGCTAAGTGA
AGTCTGAGAATTAGGTATGTCTGAAATAAAATGGCTTTTTTATGACAATA
AAAATCCCATGATATGATGTATTCAGTTGTTGTCCATGACATTGAAATAA
TTTAGTCTATAGCTACAAGTCTGCTTGTTCTTAGTTTGATTTTAGTTTGA
TGACTAGCTTGATATAAACAGAAATTTTGAATAATTTTTCTAGACAGTAC
ATAAAAACAAAAGAACAAACGTTTTGAGGTCATTTTTATCCTATATTCTT
CAAAGGGATTATTTTTTGTAGGTATTCTCACCAGCTGCTAGTTCCCTTTA
AGGGAAGGGTTAGGTGTTACTATTATCCAGATAATTCAACTCCATATTAT
ACAATATGTGAAATGAAATCTCATGATTTTAAAGGAGCATTTTTTATTTG
ACAAGAGATAATGTTGACAGTTCACTTGTGTGTTGTGACCAAATTATAAC
TTTTTATCATTTTAGTGGCTGACGGATACATTTTTGAAAGGTGGGAAAAC
AGAGGCACTTTCCACACCTGGCTTGCAAAAGAGGAAAGAAAAAAGGAGAC
TGTACCTGGCTATTCAAACTGTTGAAGGGCTGCAAACTACAGGTTTGTAA
TGATTTTGCATTCAAAGGTTTTTTAGTATGAAATAGTACAATGTTAATTT
TTAAGCAATCAATGTTTCTGCGAGTGCTCCTGGCCTTGCATGTTTTGGAG
GGGTTTTTTTTCAAAATAGAAAACCAACACTTTCTCCATCTTTTATTCTT
TCATTNTTTTTTTTTTCAAAATAGAAAACCAACAATTTCTCTGTCTTTTA
TTCTTTCAATCAGACTTTTTTCACCTTTCATCTTTAGTCAAGACATTCAC
TTCCTTGATGCAAGAGCTGCTTGTCGAATATCCTGGATTTTACATTTTGG
GTGGTCGTCTTAGTCAGCCAACCTACACTTATGGGCAGGTCGTTCTGATT
TTTCTATTGTTAAATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058011-exon-scaffold_303-1575043694:5868..5952 | TCONS_00058011-exon-scaffold_303-1575043694:5868..5952 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1575043694:4205..4347 | TCONS_00058011-exon-scaffold_303-1575043694:4205..4347 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1575043694:3511..3637 | TCONS_00058011-exon-scaffold_303-1575043694:3511..3637 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1575043694:3135..3265 | TCONS_00058011-exon-scaffold_303-1575043694:3135..3265 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1510915933:5868..5952 | TCONS_00058011-exon-scaffold_303-1510915933:5868..5952 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1510915933:4205..4347 | TCONS_00058011-exon-scaffold_303-1510915933:4205..4347 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1510915933:3511..3637 | TCONS_00058011-exon-scaffold_303-1510915933:3511..3637 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1510915933:3135..3265 | TCONS_00058011-exon-scaffold_303-1510915933:3135..3265 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1491911889:5868..5952 | TCONS_00058011-exon-scaffold_303-1491911889:5868..5952 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1491911889:4205..4347 | TCONS_00058011-exon-scaffold_303-1491911889:4205..4347 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1491911889:3511..3637 | TCONS_00058011-exon-scaffold_303-1491911889:3511..3637 | Clytia hemisphaerica | exon |
| TCONS_00058011-exon-scaffold_303-1491911889:3135..3265 | TCONS_00058011-exon-scaffold_303-1491911889:3135..3265 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_303 | supercontig | scaffold_303:3135..5952 - |
Blast
The following BLAST results are available for this feature:
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