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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057883 ID=TCONS_00057883|Name=TCONS_00057883|organism=Clytia hemisphaerica|type=transcript|length=966bp
tttctaaattttacgGTGCTGCCTACATATTGTTTTTGAAATGATTTGCA
TATCAATAGGTAGACAACATGTTCAGAATCACAGTTCAAATGACACCTGA
TTTCGTACTCCTCCGATGTTATTGAGCtcctaaaagattttgttttagtG
TTAGAAGGACATATCAAGCAGCGTGTTTTCTGACATACTTCAGATTGACC
TCCTGTCTTCTTAGGTTTAGAGAGTTTGGATCGAACAAGAAGGTCTTTGA
GGCTTTTGCCTCTCTTAAAGCCAACGATAGGCACGTCAGAAAACACCTTG
CGATGTTCTTCATTCGCCGCTGTGAGGATTACATGAATGTCTCGCAAGAC
ATTCTTAGTGTTGGCAAAGGCATGATGATAAGTTAGATTGAAAACCAGTT
TACGTCCACGAGCTTTTTTATTGTTCTGCTCTCTGAAGAGCAAATCATCT
CGCTTCGGTTCTCTGGCCTTCAGAATTTCTCGACGGACTAGTTTGTCACT
ATATCCTCGTTTTTTTAGCCACAGTGCTAGCTGGTCGCATCTGAGgtcaa
aaaaagattgttcTGAACAGATGCGATTTAAGCGTAGGCCCTGGCCATAA
GGAATGgccttttttgaatgaaatgcGTGGCACGAGGATGCGTCTAAATA
TTGATGGGTATCAGTGGGTTTGACACTAACTTATCATTAAGCCTAATAAT
TTGGACATCTAAAAAATTGACAGAAGTCGGAGAATATTCAAAGGTAAATT
TGATAGAGGAATGGAAATTGTTAATGAATTTTCCGCAAATTACCGCGAaa
cccggcggcggcggcggtaaattattctaatgaaaaatgttgattACCGG
CGGGTTGCCGCAAAACACCGCGAaacccggcggcggcggcggtaaaTTAT
TCTAATGAAAATTGCTATCAATTTTAGACAAGTTCTGACGAATGAGAAAT
ACCACCGGGTTTCCGC Run BLAST on NCBI transcript from alignment at scaffold_300:1908..2873 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057883 ID=TCONS_00057883|Name=TCONS_00057883|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at scaffold_300:1908..2873 (Clytia hemisphaerica)
GCGGAAACCCGGTGGTATTTCTCATTCGTCAGAACTTGTCTAAAATTGAT
AGCAATTTTCATTAGAATAAtttaccgccgccgccgccgggttTCGCGGT
GTTTTGCGGCAACCCGCCGGTaatcaacatttttcattagaataatttac
cgccgccgccgccgggttTCGCGGTAATTTGCGGAAAATTCATTAACAAT
TTCCATTCCTCTATCAAATTTACCTTTGAATATTCTCCGACTTCTGTCAA
TTTTTTAGATGTCCAAATTATTAGGCTTAATGATAAGTTAGTGTCAAACC
CACTGATACCCATCAATATTTAGACGCATCCTCGTGCCACgcatttcatt
caaaaaaggcCATTCCTTATGGCCAGGGCCTACGCTTAAATCGCATCTGT
TCAgaacaatctttttttgacCTCAGATGCGACCAGCTAGCACTGTGGCT
AAAAAAACGAGGATATAGTGACAAACTAGTCCGTCGAGAAATTCTGAAGG
CCAGAGAACCGAAGCGAGATGATTTGCTCTTCAGAGAGCAGAACAATAAA
AAAGCTCGTGGACGTAAACTGGTTTTCAATCTAACTTATCATCATGCCTT
TGCCAACACTAAGAATGTCTTGCGAGACATTCATGTAATCCTCACAGCGG
CGAATGAAGAACATCGCAAGGTGTTTTCTGACGTGCCTATCGTTGGCTTT
AAGAGAGGCAAAAGCCTCAAAGACCTTCTTGTTCGATCCAAACTCTCTAA
ACCTAAGAAGACAGGAGGTCAATCTGAAGTATGTCAGAAAACACGCTGCT
TGATATGTCCTTCTAACactaaaacaaaatcttttaggaGCTCAATAACA
TCGGAGGAGTACGAAATCAGGTGTCATTTGAACTGTGATTCTGAACATGT
TGTCTACCTATTGATATGCAAATCATTTCAAAAACAATATGTAGGCAGCA
Ccgtaaaatttagaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057883-exon-scaffold_300-1491911889:1908..2873 | TCONS_00057883-exon-scaffold_300-1491911889:1908..2873 | Clytia hemisphaerica | exon |
| TCONS_00057883-exon-scaffold_300-1510915933:1908..2873 | TCONS_00057883-exon-scaffold_300-1510915933:1908..2873 | Clytia hemisphaerica | exon |
| TCONS_00057883-exon-scaffold_300-1575043694:1908..2873 | TCONS_00057883-exon-scaffold_300-1575043694:1908..2873 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_300 | supercontig | scaffold_300:1908..2873 . |
Blast
The following BLAST results are available for this feature:
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