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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057870 ID=TCONS_00057870|Name=TCONS_00057870|organism=Clytia hemisphaerica|type=transcript|length=1221bp
CCTTTTTGGTGAAAAACACAAGAAAGGTGCCCTTTTTGACTACCACCAGG
AGAcactgccctgcctttctaaaatattgcCTGGCAGATATTCATTCAGT
GTATTTTCATAAtatcaacaaaacaaagaagaagTGTAGGTACCTGAAAA
ATATTTCTGTTTCTGGTCAGTTGGCACAtcaatatttctttgtttttttt
aaagtttgatttGCAAGGACGTTATTgtgttatattttttaaaatataat
gCAATGCAATTTTATAAATGATGCAAAAAATAATACCATACTTTTTTTAA
CTTCTATTTATCATAATAGAAGACTGAGTGTTTAGAAAATGGATTTAGGG
ATAGAAATCTCAATACCATACCATTGCAACCAACGCGAGTTCCAGTggac
ttgaaataaaaatattttttggtttaCAACTGTTGGGTGGTTGAAATTGG
CAATAAGATGACATAATCTAATAGGTGCCTGTCAAACTATCATTTaccat
ttttattccaaatatACATCCTTTTTGGATTTTCtatctgaaaattattt
tcatgtcCCCTCAGCTACTCTTTAGGCTATCAAACTTTATTCAGCTTTTA
CTAGACGCCTGGTAAATTATTAAAAGAGATTATCTACAAGTACAACAAAA
CAGTGTGCTTCCCGCAACGTAAACAGTGAACAGTGCCAAAAGTGTccata
tcatttgaaaatcattcAGCTGAATTTTTTCTTAGACAAGGCTCTTTACT
TTTTCAGGAGCAAAATAACAGAAGATCTCAAAATGCTGCTCGATGTAGAG
AAAGTATGCTTGCTCTTGCTCAAAAAATGGACAAGTTAAATAAACATGAA
ACTGCCAAAAAAACTGGAAATATcaacaatgaaaatattttggctaAAAG
AGAATATTGTAAAATTGCATCTGAAGTATCAATGCAATTCGAAACACTTT
CCAGAAAGTACGAGAAGGATTTGTCAAGCTCTTAAACTCCCTTAAACTCT
TAAAATTaaagagattttttaaattataagATTGTATATAGGTAATGTTC
TGCACAATATATGaattaatattttgattttatgatGGGTGtatattgtt
ttgatttatttttgtactGTATAGAAAAAACTTTGACTTAATAAATGCTT
TATGAAGTGTGTATTTTACATCAAACTTaagtttttcataaattttgtcC
ACTCTCTAAATTAAATCTTgc Run BLAST on NCBI transcript from alignment at scaffold_30:14644..15864+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057870 ID=TCONS_00057870|Name=TCONS_00057870|organism=Clytia hemisphaerica|type=transcript|length=1221bp|location=Sequence derived from alignment at scaffold_30:14644..15864+ (Clytia hemisphaerica)
CCTTTTTGGTGAAAAACACAAGAAAGGTGCCCTTTTTGACTACCACCAGG
AGAcactgccctgcctttctaaaatattgcCTGGCAGATATTCATTCAGT
GTATTTTCATAAtatcaacaaaacaaagaagaagTGTAGGTACCTGAAAA
ATATTTCTGTTTCTGGTCAGTTGGCACAtcaatatttctttgtttttttt
aaagtttgatttGCAAGGACGTTATTgtgttatattttttaaaatataat
gCAATGCAATTTTATAAATGATGCAAAAAATAATACCATACTTTTTTTAA
CTTCTATTTATCATAATAGAAGACTGAGTGTTTAGAAAATGGATTTAGGG
ATAGAAATCTCAATACCATACCATTGCAACCAACGCGAGTTCCAGTggac
ttgaaataaaaatattttttggtttaCAACTGTTGGGTGGTTGAAATTGG
CAATAAGATGACATAATCTAATAGGTGCCTGTCAAACTATCATTTaccat
ttttattccaaatatACATCCTTTTTGGATTTTCtatctgaaaattattt
tcatgtcCCCTCAGCTACTCTTTAGGCTATCAAACTTTATTCAGCTTTTA
CTAGACGCCTGGTAAATTATTAAAAGAGATTATCTACAAGTACAACAAAA
CAGTGTGCTTCCCGCAACGTAAACAGTGAACAGTGCCAAAAGTGTccata
tcatttgaaaatcattcAGCTGAATTTTTTCTTAGACAAGGCTCTTTACT
TTTTCAGGAGCAAAATAACAGAAGATCTCAAAATGCTGCTCGATGTAGAG
AAAGTATGCTTGCTCTTGCTCAAAAAATGGACAAGTTAAATAAACATGAA
ACTGCCAAAAAAACTGGAAATATcaacaatgaaaatattttggctaAAAG
AGAATATTGTAAAATTGCATCTGAAGTATCAATGCAATTCGAAACACTTT
CCAGAAAGTACGAGAAGGATTTGTCAAGCTCTTAAACTCCCTTAAACTCT
TAAAATTaaagagattttttaaattataagATTGTATATAGGTAATGTTC
TGCACAATATATGaattaatattttgattttatgatGGGTGtatattgtt
ttgatttatttttgtactGTATAGAAAAAACTTTGACTTAATAAATGCTT
TATGAAGTGTGTATTTTACATCAAACTTaagtttttcataaattttgtcC
ACTCTCTAAATTAAATCTTgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057870-exon-scaffold_30-1491911889:14644..15864 | TCONS_00057870-exon-scaffold_30-1491911889:14644..15864 | Clytia hemisphaerica | exon |
| TCONS_00057870-exon-scaffold_30-1510915933:14644..15864 | TCONS_00057870-exon-scaffold_30-1510915933:14644..15864 | Clytia hemisphaerica | exon |
| TCONS_00057870-exon-scaffold_30-1575043694:14644..15864 | TCONS_00057870-exon-scaffold_30-1575043694:14644..15864 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:14644..15864 + |
Blast
The following BLAST results are available for this feature:
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