TCONS_00057856 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057856
Unique NameTCONS_00057856
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1860

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057856 ID=TCONS_00057856|Name=TCONS_00057856|organism=Clytia hemisphaerica|type=transcript|length=1860bp
TTTtcagttaaaaaattaaaatagcaTAACAATGAAGAGATATTGGGCAT
CGATTTTCTGGCAATTCTTGGCATACATTTTATggatttgtttttttcat
tttgtgatTGGGAAATTCCACGTTGATtcgTGACAGTTACGAACAATTTG
AATAAGAAAATTCTGGTGTCGACAGGTAAAGCACCAGAGTGTTGTTGGAA
GGTGGATGACGATGAAACTGATTGCGAGTCGATGGTATTGGTCGGaggat
ttgaaaaagaaattgatggCAAAACAAGCAAAAACATGTCTTTCATGTTC
TCGAATTTGTACCCCCTAGATCGTGTTGGTTCGTGCAAGTTTTATTTGAA
AGAAGGGAAGGACAAGCAGTTTTTGGTGCACGAAATGAAGTTTGACACTA
CTCCCACTAATGAAGACACAAGTTCCTCTACTGTGTATGGAGGAGGTGGT
AACCAGTTTTACAAGGCGTGTGATACTGTTGATAATAACATTCGTAACAG
TTGCAAGCCATTCGATTGTTCGGCCAAGTATAATGGATTTCGGAATTACT
ACAACAAGGTGACAAAACGATGCGAACCAGTGTTTACATGCGCCACACCG
CTTGGTGATGATGATTTACCTGATTCGGCATTTGATATGGATTTCAACAG
TTGTAAATCGTTAGAGCCGAAAATGTCAAAAGAGGAAGAAGAAGCAGCCA
AAAATTTGATGAATAAAAGCCCGTTGCAAAAAGAAATAAANAGAGGAAGA
AGAAGCAGCCCAAAATTTGATGAATAAAAGCCCGTtgcaaaaagaaataa
atcagtACGCTGATATCAATGCTGAAGAGatTGTGTTGAGTTGTAAGAAC
GGTTATCAGGAAGATAACCATTGCCGTTGCAACAGAGGATGGAAGACAGT
ATCAAAGAAAACTAAAGATGGAGCTCTTACGATGGACTGGTGTTCCAAAA
AAGTCCCGATCATACCCTCTAAAGCCACTCCTACTGCTAGATGGACTGTC
TTCGGGATGCTGACCATAGCAACCATCGGGTTCCTTGTTTTGATTGGCTA
TCTGTGGTGGAGATGGTTCCTGGGTGATATGGTGCGAGATTATCTTGAGC
GTCGTCGCAGCGCCGCCGCGAAGGAGGTTTATTCTGATAGCGAAGGAGAA
GGTGAACACTCTCCTACACAGGGAAAGTCTCAGAAACGACAAGATTATTC
TGATGAAGAAGAGGATGAGTACGGTGACCTTTACAGTGAAtactaagacc
atgttcacataCTGTGGTTCCTCTTCGCACTGAAACAAAATGAAGNCGAA
TACTAAGACCACGTTCACATACTGTGGTTCCTCTTCGCACTGAaccgaaa
tgaagccattctattggttaagttcaagttttacgtcacttataaACAAT
AGAATGACTTTATTTCTTTTCGGAGCTAAACGGGACCGTTACACGTGCAG
GCATGGTCTATGTTAAATCTGGACATGACATTCTATAATAGACGTTCGGA
CAGATTATGATGTCTTTCGATGGGAAAGCGCAAGTATTTTTACCATGGAT
GTTCTCGAGACTTGCGTCTCCGAAACTTTCAAACAAAACTTAGATACGAT
ATGATTAAGCAGACAATGGATTTCTACTCTATGTTTTAACttgtaatttt
tatatattctgtattatatttttccaaagatttcctattatattttttct
gacaaatattctttttattcaaagttctaaaattgCAATTTTCATTATTA
TACATACCTATTTGCAGCAACTCTAGTTGTTAAGTagctttttttaatat
aaatatGGTGGAAAGTAGGATACAAACTATCCGGCTACTAagcaattttg
aagaaaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_3:126988..137901-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057856 ID=TCONS_00057856|Name=TCONS_00057856|organism=Clytia hemisphaerica|type=transcript|length=10914bp|location=Sequence derived from alignment at scaffold_3:126988..137901- (Clytia hemisphaerica)
TTTTCAGTTAAAAAATTAAAATAGCATAACAATGAAGAGATATTGGGCAT
CGATTTTCTGGCAATTCTTGGCATACATTTTATGGATTTGTTTTTTTCAT
TTTGTGATTGGGAAATTCCACGTTGATGTAAGAATGTCAATTTTATATTT
AAAATCGATTTTGTGATCACACTCTCATCAAATAAATGATTTCTTATTTG
TAAGTGAGAAATATATGCGCTGGAAAGGCAAGACTGGTATCTTTATCTAA
AATATAGCTTGTCTATAGACTTTCATCCTTAAGCTCTCTCTCTTTAATAA
TTTTCACTTCCCAACATAGCTTTGACTCCCCTTCTGAAAGGAGTGGTAGG
GGCGGTCCTAAAAGTCGCTTAAAGAGAGTTTAAAAGAGAAGGTTTTTAAA
AATTTAGTAATACAGTAGGTAGTCCAGGCAATATGGGGCATGAGGTACCA
CCTTGACGGCGAAAAAGGTTTGAAACTGTTTTTGGGTTCAAACACATCTA
AATTTTGAGAATCGCGATGGTTTTCAGGCTAACCAGGGGGCAATACCTTT
TCAGAGGGGGTGTTTCGAGGGTACGTGGCAATCGTTTTTGGAGCCGATTT
GCTTGGGGTAGGGTACTGCATTTAAAGATATTTCATGAACTACATATCAA
AACCTATTAAAACTTTGCAGGGTTTTAGATATAGCATCAAAGATTGTGTG
TGAAAAATTTCAAGATGGTAGCACGAATAATGTGTATTTTACAGACCCGA
ATATCAAAATTTTGTGAAAAAATCTAATTAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAATAAAACTTTTCAATTTCACACAGGGCCAAATTCTTC
CATGAAATAGATGTTAATGCCTTCATTGCTCGTAGTCGGTATAGTTGTAG
CATTGTGGAAAATTTTATGGATTTTAGACGACTATTTTTTGATTTACAGT
CCATTTATTTTGAAAAATTCGGTCAAAAGTGCCCCAAAATACAAGAAAAA
ATTTTGACGTTTTTCTTTATTAGCTCAGCAATCAATCAATTGAAGCATTT
TTGTTGATAATATTTATAACTTTATATACATTCTTAGTTTAGAAGTCTGA
CTTAGCAGTTGTTAAGTGCCTTTGGTATTTTACAGACCACTTTTCTGGCT
ACTTTTGATTTAAATAGAATTGGCTCAATTTGAAATATCTCACTTGTCGT
CAAGTCATGTAAATCAAAGTTGAAACGCTTTTAAAATTGTCATGTGTTGA
AAATGCGTTTCTGCTTATTTTGAATTAGATGAAATTGGGAAAATGTAATA
ATTTACAGACCAGAAAATATAAGGCATTTTCCATCAATAAAACTATAAAT
AGTGAAATGATAATCGTAAGCATACATTTGACTTTATCAAGCTTACCAAA
AATACATATCCCGAGCAATTGATGCTGGTCACCTAAAGCACTTTATATTT
TTGGCAAGCAAATTTAGGCTAAAAGTGCTCGCTATCTCTAAGACTCGTCA
TCTCGAAACTTTGCTATCTGGATCTTAATCTTGATTCCTTGAGGTGTTTT
TCACTGTTACAAAAAATATGCCAAAAATAGAGTGTATCCGGAAAAAAGGG
GAACAGATTGGTACAAAAAAATCCTCAGGATCTGTTGCTTCAACGGATTT
TTCTAATAGAAAACTGAGGAACTTGAGGATTTGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTACTATCCTCCGGACACACTGTAGGATAG
ATATGACCAATAATATCATTATTCACCCAATTTTGTAAATTTTCAGTAAC
CTTTTTTCGATTCAAAAGACCTACGGTGATCCTTTGTGCTTGTCTCGTTA
TGTCAATATTTCTGCCGTGCATGTGAATCATCTAAAACATCTGCTATCTC
TTTTAGCCTTAAGAAATACAATCTTAAGTTTAAACTTACCAAGAATAATG
TTGCGCTACAATCATGGTTGAAATANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGGGTATC
AATGTTGGTACTCGCTATTATTTTTACAGGGAAACAAGAGACACTCGTCT
TCAATGCAAGTTGAATGGTTTTAAAGAACCAAAATTGAATATCATTTTAG
ATTTGAACATTAGAAGATCCCTGTCTCAACGACCCATTGAATCTGTGGGA
ATAAGGTTAAGAAAAGTATCCAATGGGATCTCTTGCTTTTAAGGGGTATT
TTAAGACTTGGTGGCTATGGTTAGCTTAGTGGTTGTTAGCTCAGTTGGTT
TGGTGTGTAGGGGTGAGTCATAGTACAGATTAGCGCCTTGACTGCTACTA
CCGAATTCTCCTCATCGCTCGCCTGGGAAGATAATGTTTTAGAAAAAAGC
ACATCTCAACGTTGTCTCAAGGAGTTCGGCGATTAGATGCATGGTAGTCA
TCAGTAAATGTGATTCAGCAATGTATGTCTAAGGTGGTCGTATAAAAGTT
GGAGGTAGCCATTACACAGTTTAGCGTAAGCAACATCCCATCCCGTCCTG
GTTAAATTGATTCGAATAAAAAGGCCTGAGTGAGAATCAACCGCATAACC
TAGCGTAGACTGGAGCTACTTTCTTCTTTAGATTTTTATGTTAAAAATTG
AAAACCTTTTAAAAGCCAGCACAAAAAAAGGTTTTTTAGACAAGTTCCCA
GATAAATCTCTCATATCAGATCGCCATTCCAACCCTCTAATCTAAAGTGA
TGTTGCGAATGTGATCCCTCGTACAACTTAGTGGATCAACCAGGGTCTGT
TCGGAGATAACCGATAAATGCAAAAAAAAAATTATATCTGATGTAGTTTA
AGGCCCAAGTAAAAATTTTACTGATCTTTCTGGGTTACGGATACCACCAT
ACTCTCTTTAAGTTGATACAGCAAAATCTTCATTAGCAGTGTCTTAAAGA
TATCGACGAAAAACTGTATTACTTTAGAACTAGGAAAAGGTTTTAAAGCC
TAGAAAGGAATGTCAAGCTTGACTTAACGTGCCGATACCGATTGCTTTGA
TCTGTAATTTAGATTAGGTACTGTACGCCACCTTGAATGTTGCATGTATC
CTACTAATCTAGGCTGTCCTACTAGTACTAATGCAAGTTTGATAGTTATC
AAGATTATCAAACTTTAAAGGTTTTCTTTTTAAATAAGAGTGATATCGTT
TACTTACTCATCAATTTTAATTCACAAGCTTTCTCCCATTGGATTGACAC
GTATGTGGAGCAAGATTGGTCAGAAAGAGGAATAGAATTAAAACATTGTT
TGCTTATATCAGCATAATAGAACAATAGGCAGACACTGTCCCGTTATAAT
GGGAACACTTGTGTAAAAATAAAACCTTTAACGTTTGAGTCGTTATTAAG
ACTTTTCCACTACAATGTAAACACAGGTCAACTGTGTCAGTCTTGTTTGA
TAGTGCAGCATAATACTTTAAATATATTCATTTCAGCTACTTTTATATAG
ATGTACTCAAAAAAGGGAAGGCTTAGTCTGTAAAATACCAATCAGATAAA
CAAAATGTTTAAGGGATATATTTGTTTGTCTGCTTCCACAAGTCAACGTA
GCGGGGTTTCGTGCAACGCTTTATATATCTGGTCTGTAAATTACATTTTC
CATCTAATTGTCTCATCATCTGATTTAAATTGAGCAGGAACACATTTTCG
ACACATTATGAAAATTTTAAAAGCATTTCAACTTTGATTTACATGACTTG
ATGACAAGTGAGATATTTCAAATTGAGTCAATTTTATTCAAATCAAAAGG
AGCCAGAAAAGTGGTCTGTAAAATACCAAAGGCACTTAACAACTGTTAAG
TCAGACCTTCTAAACTAAGAATGTATATATAGTTATAGATATTATCAACA
TAAATGCTTCAATTGATTGAAAATATGAGTCTCCGACAACGTTGAGGAGT
CAAAACTAAAGAGAGATCTTAATTTTTATGAAAAATTCGAAATGTTCTGG
TCTGTAAAATACACATTTTTTATCCCACCATCTCGAAACTTCACTTGAAT
GTTCCTGGCCTTAAAAAGTAACATCTGTGAAATTTTAATGAGGTTTACTT
GGCCTTTTGCTCAAAATAAATGGACTGTAAATCAAAAAATAGTCATCTAA
AATCCATAAAACTTTCCACAATGCTACAACTATACCGACTACGAGCAATG
AAGGCATTAACATCTATTTCATGGAAGAATTTGGCCCTGTGTGAAATTGA
AAAGTTTTATTTTTTTTTTAATTAGATTTTTTCACAAAACTTTGATATTC
GGGTCTGTAAAATACACATTATTCGTGCTACCATCTTGAAATTTTTCACA
CACAATCTTTGTTGCTTTATCTAAAACCCTGCAAAGTTTTAATAGGTTTT
GATATGTAGTTTATGAAATATCTTGAAATGCAGTACCCTACCCCAGGCAA
ATCCGCTCCAAAAACGATTGCCACGTACCCTCGAAAGACCCCCTCTGAAA
AGTTATTGCCCCCTGGTTAGCCTGAAAACCATCGCGATTCTCAAAATATA
GATGTGTTTGAACCCAAAAACAGTTTCAAACCTTTTTCGCCGTCAAGGTG
GTACCTCATGCCCCATATTGCCTGGACTAAGAGAAAGTTCTTCAAAATTG
TGGAATAAGGGTTCAGATAATTTTATAACAATGATGGCGTTAGCAGAGTT
TGTTATTTTTTTTACAGGACCAGTCTTACTTGTATACTAGCAAACTTGCT
CTTGCTACATGAGTCACTTTTCAGATTGAAAGAAATCTTCATTTGTTGAA
ACAGTTGCTTTCAGATTATTATCGTCTCCACTTATTTCGTTTAGAACGCG
GGACATTTTCCAGTTGATGAGGATGATATGGGAATACGTTTTTGTAAGTC
GTGCGCATGAGCAGTATCAGAATAAATACATCACTCAGTTTATTAGCTAT
AAATATTTTAGAAACAGACTTTGCAAACTATTTGGTAACATCTTAGAAGA
AATTATAAATGGTAGTAAATAGAATAACATTGTTCACTTTTATTAAGACC
TCTAGATTGTTGTTGTTCAAAAAGTTTAGAATTCAGTCTATGTATTTAAA
TCATACAAACAGGCGTTTTTTATTTTCATTTTTTTTTCAGTCGTGACAGT
TACGAACAATTTGAATAAGAAAATTCTGGTGTCGACAGGTAAAGCACCAG
AGTGTTGTTGGAAGGTGGATGACGATGAAACTGATTGCGAGGTTGGTACT
TAAGATACCTTAAGTTGATAAATTTTGGCGGGGATTAAATTTCCAATTCG
CCAAATTAAATCCCCGCCAAATTTTACGAAGTTGATCTATCGCCAAATTA
AATCCTCGCCAAAAATCGTATTTTGGCCAATTCCAAGCGCCATTGAGTGT
TTTTCTAACAATACCAACCTGTTTATTATACAACGCTTGGAAAGTTATGA
CCCAAAATAAAAACACTGCACAGCTTTGACTCAGAATTTAACCTTACTTA
AATGAAAATTATACCACCGTCTCTGGAATTTATACTTTTATTTTAATGTT
ATTACAGTCGATGGTATTGGTCGGAGGATTTGAAAAAGAAATTGATGGCA
AAACAAGCAAAAACATGTCTTTCATGTTCTCGAATTTGGTAATCACGTTC
GATTCTAAATGTTTTTCATAATGGAAAAAGAGAAATTATCACTGAGATTA
GTCCTAATGTTCTTATTTTTAGGTATCGCACATATTTTAGGTTTCATATC
AAATTCTCCTTACTTTGGCTTTAATCGTCTGATTTTTAGCAATTCAAGGA
TCAGTTTTCATAAATTGTTTTTATTTTTTGGCGTTTTAAGTCTCATTGTA
TTTATTAAGAAGATACTGTTTTTAGGATCAGCGCATGTTAATAGTTTTAT
TTTTACATAAAGTGTTCCTGTTTCATATCAGACACATATTTACTATCAGG
ACAGTGTCTTGCTATTGTTATATTATGCTGATACAAGCAAAAATATTTTT
CTTTTCCTTTTTCTGAGCAATCTTGCTCTACATCCGTGTCGATCCAATGT
GAAAAAGCTTGTGAATTAAAATTGACGAGTAAGCAAACGATGTCACTCTA
TTATTTAAAAATAAAACCTAAAAGATATTCTTTGTCTTCAGTACCCCCTA
GATCGTGTTGGTTCGTGCAAGTTTTATTTGAAAGAAGGGAAGGACAAGCA
GTTTTTGGTGCACGAAATGAAGTTTGACACTACTCCCACTAATGAAGACA
CAAGTTCCTCTAGTAAGGGATTCTCATTTATTTCATACTTAGTTAAAAAA
AGCCCTAGAAATCTTCTTAAATTGATAGAATGGCCGTATGCATGTTGAAT
TGATATGGTCATCGTTTTGAATACTGAACGAAACTGAAAGAAGACTTTTT
TTTAGCTAGCACGCATGCTAAATTATTTTAAGGTCGTGTTACAAAAGTTT
TATTTTCAACATTTATGNCTGTACGCATGCTAAATTTTTTTAGGTCGTGT
TACAAAAGTTTTATTTTCAACATCTATGTAATTCTTTTCCTTTCAATGAG
AAAAGGAGACAGTCAAGTTATTGATTCCCTTCAATTCAATTCTAGTTACT
TAAAGCTATGCTTACTTATATTTTAAAGGAAAAAACATCCATCGAAGAAA
CTTTCGCCATACGCGAAAGTTAATTCCTGCGAAATATTGTCAGATTTGTC
ATTCGCGAAAGTTAATTTTCGCAAAATATGGTCAAATTTTGTCATTCGCG
AAAGTCAATTTTCGCAAAATACATATAGTTGAATGGGCTATTCGTGAAAG
TAAATTCCCAAAATTTCACGATTTTTTTGCCTCGCGAACCTTTCTTCTGC
GAAAGAATCTTTATATCAAGAAACTTAAATAAAAGTTTTATTAAAGTTCC
TTCTTGGTTATAATTATGGTGCCTTTCTCTCGTATTAATAGCTGTGTATG
GAGGAGGTGGTAACCAGTTTTACAAGGCGTGTGATACTGTTGATAATGTA
AGTCTAATTCATGTCAAATTTATGATACATTATCGAGTTACCATTTTATT
TATAAAACAAGAAGATCACTATATTGTTAGGGTGAGATCAAGTATATAAG
TGTATAATCTTTCCTTGATGAGAAAGCTTGCCGAAGATTTCGAAACACTG
GTTACAACCCGAATTTCTGTTCTCTAGTAGCTTCTACTTACTATCTACAC
TAAAAATAATTCATATGTTTTTTCTCTCTTTGCAGAACATTCGTAACAGT
TGCAAGCCATTCGATTGTTCGGCCAAGTATAATGGATTTCGGAATTACTA
CAACAAGGTGACAAAACGATGCGAACCAGTGTTTACATGCGCCACACCGC
TTGGTGATGATGATTTACCTGATTCGGTGAGTTATCCCAACACTTTTCAC
AATGTTTTATAATTTTTCATAATTTTTGAGACGGAGGTGAAATTGCCTCA
TTTTAACGTATCGGCAATTTATACAATAGACAACTTTTCTGTCTTTTCGG
CGCCGCGTGAGCACAAATTTTAAGAACTTGTCTTGTTCATTCTGCTTCGT
CAGTATAAGGGCGCGGCCTTTAATAGAGAAAAATGCAGGTAAAAGAAGGA
GCTACGGTTGATCCGTTGCGTAGTTTCGGTAATGACCGCGACGTGATTGT
GGAAAGTGGTTTTGGTTGCGACATGACTTTTTTCAAGTACCATTTTAGAC
AAAACTGACGCATCTTGAACATACATTGACGATTTACTTTTGTGAAAAGA
CCAAAAAATCTCGAAAATTGCGAAATCTTCTGTTCGCGAAAGTTTGAACG
CTTTAAGTTATTAAAATTCCCTTCGTTTTACACTTCTCAGCCTTTCTGAA
ATTTTACCCTCTGAGGTCTTGGGTTTTAAATTGTAGAATTTTCACAGCGT
TTTCAGTATAAAGCCTAACTTATTGGCTACAATGTATTTAACAATAATAT
CAAGTCGATACAATATCGAATGTTGTATCTTTATTTAACCCATTTTCAAA
GGCTTGCCAGGTCTTTATCGCTTATTGATTTTGTGTGACAAGTTTTACAA
TTCCCTTGACAGGCATTTGATATGGATTTCAACAGTTGTAAATCGTTAGA
GCCGAAAATGTCAAAAGAGGAAGAAGAAGCAGCCAAAAATTTGATGAATA
AAAGCCCGTTGCAAAAAGAAATAAANAGAGGAAGAAGAAGCAGCCCAAAA
TTTGATGAATAAAAGCCCGTTGCAAAAAGAAATAAATCAGTACGCTGATA
TCAATGCTGAAGAGGTATTGAACCAAAAATTTATGATTGCACCGAAAGAT
AAATTTTCGCGTGGACTTTTTCGCGAATCGAGGATCTTAATTTTTGCGGG
GACATGATTTTGCGAATCGGTCTCTTTCTCATCTAATTCCTTTCATTTTC
CTGGGGTTTTTGGCAAAAGTCCTGATTTCTTATCTTTATAATCTTACTAA
CACGTTTTTAAGGGGCGCGAAGTACTTCTGACCTTTGTACACAAACTCAA
AAACATATTAAATGTCACATGTAAACAAAAAACAATATTTTCTATTGTTT
GATACATTTGTTTTGACACGTGTTTCGTTTAACGAAACTCTCGAGCAATG
TGTACATTTTACCAAATAGATCCCCCATATTTCGAACGGCAATGAGGGCA
CTCTATTAGAGTATTAGAGCAGAATTTCCCCTATTTGTGAAAAAAGCAAA
ATTGAGACAACACTTGCCTTCAATCTTTAATTTTAAAAAACAAGGTCTCA
AGGGACAAGTAAAACTCTTCGAGGAGTCATTTGAACTACAGATACTTTAC
TGTTCCTTTAACACCTGAATCCCTTGTTACAAAGCTTACAAATTTACTCA
ACGAAAGTCGGCTATCTCAATTTTATTCCTTTTTATGATTTTAGATTGTG
TTGAGTTGTAAGAACGGTTATCAGGAAGATAACCATTGCCGTTGCAACAG
AGGATGGAAGACAGTATCAAAGAAAACTAAAGATGGAGCTCTTACGATGG
ACTGGTGTTCCAAAAAAGTCCCGATCATACCCTCTAAAGCCACTCCTACT
GCTAGATGGACTGTCTTCGGGGTATGTCACTTTATTCCCAAAATTCAAAG
CAATGTTCTCTTTCCTGGGAAGCAAAGAATACTTTTTACGCCAAACCAAG
TTATAATAACGTCTCACTTATTCGATGATGGTCAAAATCGCTATCCTTGC
TATGAAGTCTGCCTAGAAATAATCTGCAGCAGAGACAAAAAAGGCTGTAA
TTTTTTAAATAATGCGAATAAGGCGAATTAAATTTTCTCAATAAGAAAAG
AAAAGTCAAATAAAGATGAAAAACGAAAGAGATAAATTTTTGTCTCTTTT
GTTTCCGTTGCAGATTGTTTTGAGTAGACTTCAGCTTTTTGTGGTCAAAA
AATTGTTTTCATTGTCAAAGGTTTATTACATATTGTTTTTATTTGATGTA
TTTTTTCTAGATGCTGACCATAGCAACCATCGGGTTCCTTGTTTTGATTG
GCTATCTGTGGTGGAGATGGTTCCTGGGTGATATGGTGCGAGATTATCTT
GAGCGTCGTCGCAGCGCCGCCGCGAAGGAGGTTTATTCTGATAGCGAAGG
AGAAGGTGAACACTCTCCTACACAGGGAAAGTCTCAGAAACGACAAGATT
ATTCTGATGAAGAAGAGGATGAGTACGGTGACCTTTACAGTGAATACTAA
GACCATGTTCACATACTGTGGTTCCTCTTCGCACTGAAACAAAATGAAGN
CGAATACTAAGACCACGTTCACATACTGTGGTTCCTCTTCGCACTGAACC
GAAATGAAGCCATTCTATTGGTTAAGTTCAAGTTTTACGTCACTTATAAA
CAATAGAATGACTTTATTTCTTTTCGGAGCTAAACGGGACCGTTACACGT
GCAGGCATGGTCTATGTTAAATCTGGACATGACATTCTATAATAGACGTT
CGGACAGATTATGATGTCTTTCGATGGGAAAGCGCAAGTATTTTTACCAT
GGATGTTCTCGAGACTTGCGTCTCCGAAACTTTCAAACAAAACTTAGATA
CGATATGATTAAGCAGACAATGGATTTCTACTCTATGTTTTAACTTGTAA
TTTTTATATATTCTGTATTATATTTTTCCAAAGATTTCCTATTATATTTT
TTCTGACAAATATTCTTTTTATTCAAAGTTCTAAAATTGCAATTTTCATT
ATTATACATACCTATTTGCAGCAACTCTAGTTGTTAAGTAGCTTTTTTTA
ATATAAATATGGTGGAAAGTAGGATACAAACTATCCGGCTACTAAGCAAT
TTTGAAGAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036473XLOC_036473Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057856-exon-scaffold_3-1575043694:137775..137901TCONS_00057856-exon-scaffold_3-1575043694:137775..137901Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:132061..132161TCONS_00057856-exon-scaffold_3-1575043694:132061..132161Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:131664..131744TCONS_00057856-exon-scaffold_3-1575043694:131664..131744Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:131040..131160TCONS_00057856-exon-scaffold_3-1575043694:131040..131160Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:130305..130360TCONS_00057856-exon-scaffold_3-1575043694:130305..130360Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:129926..130066TCONS_00057856-exon-scaffold_3-1575043694:129926..130066Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:129038..129239TCONS_00057856-exon-scaffold_3-1575043694:129038..129239Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:128231..128407TCONS_00057856-exon-scaffold_3-1575043694:128231..128407Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1575043694:126988..127841TCONS_00057856-exon-scaffold_3-1575043694:126988..127841Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:137775..137901TCONS_00057856-exon-scaffold_3-1510915933:137775..137901Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:132061..132161TCONS_00057856-exon-scaffold_3-1510915933:132061..132161Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:131664..131744TCONS_00057856-exon-scaffold_3-1510915933:131664..131744Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:131040..131160TCONS_00057856-exon-scaffold_3-1510915933:131040..131160Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:130305..130360TCONS_00057856-exon-scaffold_3-1510915933:130305..130360Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:129926..130066TCONS_00057856-exon-scaffold_3-1510915933:129926..130066Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:129038..129239TCONS_00057856-exon-scaffold_3-1510915933:129038..129239Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:128231..128407TCONS_00057856-exon-scaffold_3-1510915933:128231..128407Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1510915933:126988..127841TCONS_00057856-exon-scaffold_3-1510915933:126988..127841Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:137775..137901TCONS_00057856-exon-scaffold_3-1491911889:137775..137901Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:132061..132161TCONS_00057856-exon-scaffold_3-1491911889:132061..132161Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:131664..131744TCONS_00057856-exon-scaffold_3-1491911889:131664..131744Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:131040..131160TCONS_00057856-exon-scaffold_3-1491911889:131040..131160Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:130305..130360TCONS_00057856-exon-scaffold_3-1491911889:130305..130360Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:129926..130066TCONS_00057856-exon-scaffold_3-1491911889:129926..130066Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:129038..129239TCONS_00057856-exon-scaffold_3-1491911889:129038..129239Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:128231..128407TCONS_00057856-exon-scaffold_3-1491911889:128231..128407Clytia hemisphaericaexon
TCONS_00057856-exon-scaffold_3-1491911889:126988..127841TCONS_00057856-exon-scaffold_3-1491911889:126988..127841Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:126988..137901 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.78654	5.96068	2.50605	1.57104	7.43577	5.20408	4.60256	5.95046	3.97456	5.61065	10.6677	3.43019	3.60144	3.9776	2.84218	3.36	6.71068	5.92888	1.30205	2.39034	1.7643	3.44336	7.77062	3.9805	20.936	20.15	1.56166	1.03772	2.54203	4.20535
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057856 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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