TCONS_00057822 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057822
Unique NameTCONS_00057822
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057822 ID=TCONS_00057822|Name=TCONS_00057822|organism=Clytia hemisphaerica|type=transcript|length=1872bp
ttcagacaaaatgaaaaaaaagtagaaTTAGAAAGAATAATGTCACTTAG
ATTGTTTACAAGAAAGAAATGGCTTTTGggtgttttgtttttaatcttCA
TGGCAATCTACACAACGATTGTGTTGTATATCCAAGATTATCTTCATCAT
GAGAACCATAACAAGATTCCATTAATGCTCGAACACAAGAAAGATTCAGA
ATCTGTCAGAAATGAAGAATTCGCATTACAAGAGTCTCTTCCACCTCCAA
CAAGCAAGTATGATATCAAAGAAAAGTTGAACGGCACTCCCAAGAAAAAA
GACTGCTCCTTCAAGAGACATCAATTTTTCCCAATGTGCCAATCTAAACT
TGAcTATTTGAAATACCGATGGCAAGAAACATGTTTTCGAGAGGTTCATG
GTGTTGATGGTTCACAATGCTCAATACTTGAGTATTTTCAAAAGGTGGAG
CCATACTGTGGATACCATGAATCGAAAATAAGAAAAGATCTTCCGGCCAA
GATGAGGTTTGATTTACAAGGCTTATTGAAAATCATATCCGGTGAACAGT
TTCAATGGATGAGACAACGGGCCACAGATTCATGGCCTCACTGGGTTCAA
GCTGGCaagttctttcaaaagaaaaaccaaaTATATAAAAGGAAAAAGAT
TGCGTTATTCATGGGCTCATTTGGTTTCCAACCTTTGCTTTTCAAATATG
CTGGCAAGGGTGGACCATTAGGTGAATTGGTACAGTGGACGGACACGTTG
TGTGGATTGTATATCCTTGGATATGACGTCAATGTTTATCTGAATATCAC
CGAGATGAACCTTCCAAAAACACAACCCGGTTATTGTGCACCGCATTGGA
CGGATGAAATGTTGCGTGACGAGCCGGAAGTTATTTATACCGATTCCAAC
GGAATGGCGTATTTCATCATGGATCTGGGCGCTGCTGCCACTGCTAAGTA
TAGGTGTAGATTGCGATTGTTAGATTCCTTTGGCACATGGCCAGAGTATA
ATGATCCCAGCTATCCATTCGAAATAATGGGTGGTCGTTCTCCATGGGCC
AACATGAATTTGCTGACTCAACAATTCCTAACATTGTATCCTCATACAGa
tgataatttatttttgggttttgtCGTCGGCAGCAAAACGATGAACGAAC
TTCCTACAAATAAACCAACAGAAAAACAAGACAAAGCACTGCTTTATGCC
AAGTTGCTAAGTTACTGTAAAAGCCAGGAGAATCGAAAATACTTGAAAAT
TGTCAGTGAATATTTTCAATTGGAAGCCACGTCAGTCAAGAATGAAAACG
ggtttgattttttacacaacTATGGACCAGTGAGTGGCAGTAAAGTTAAA
GAGCTCTTGGCCGGTGCAAAGGTTTTCATCGGATGTGGCTTCCCGTATGA
AGGACCGGGTCCTCTGGAAGCAATGGCTGCTGGAACACCTTTCATCCAAC
CCAAGTATCCAGTCCCtaagaataaagaaaatgacGAGTTTTTCAAACTG
AAACCGAATTTAAGAAGGCTAACCTCGCAAAGCCCATACATGGAAGATTT
CGTTGGTGAGCCATATGTGTATACCATTGATATCACGAATGAATCGTTGT
TGAGATCAGTTCttcaaaagattaaaaatatgAAGcCATTACCACCAAAA
ATCCCCAAAGAATTCACAAATGAAGGAATGATGGAACGACTTCACATTTT
CACTGAGCACATGGACTTTTGTCATGCATCAAAACCGCGATGGCCACCAC
TAAGTCATCGAGAAGTTTTTGCGGcagaaaaatcaacttcttgttcAGAG
ACTTGCCGAAAACATGGTCTAGTTTGCGAGAAGAGTTATTTCGACGAATT
GAACGTTGCTTCAGAAATTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_299:29022..41635+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057822 ID=TCONS_00057822|Name=TCONS_00057822|organism=Clytia hemisphaerica|type=transcript|length=12614bp|location=Sequence derived from alignment at scaffold_299:29022..41635+ (Clytia hemisphaerica)
ttcagacaaaatgaaaaaaaagtagaaTTAGAAAGAATAATGTCACTTAG ATTGTTTACAAGAAAGAAATGGCTTTTGggtgttttgtttttaatcttCA TGGCAATCTACACAACGATTGTGTTGTATATCCAAGATTATCTTCATCAT GAGAACCATAACAAGATTCCATTAATGCTCGAACACAAGAAAGGTGAAAT TTTTATCTCTGCAATTAATTGACCACGGCTTTGCACCAGTTAACCGGTGC CAGGTGTCCCACATTTCACCGCCTTacaaaaatttctctttttttgattt tcgttttttaatcTCTGAGCAAAAgttgttcaaaatttttgttcaaGTTC TTTCTTATATGGTAcctcaaaatatattttaaaagatattaTATACACTT TCTCTAAAACGTTATCTCTTCCGATAAGGTTCGATACTTTCTTAGaaaat gatttgaatttttgtgttttcttaaacaaacggtttatttcatccccatt ctaGATTCAGAATCTGTCAGAAATGAAGAATTCGCATTACAAGAGTCTCT TCCACCTCCAACAAGCAAGTATGATATCAAAGAAAAGTTGAACGGCACTC CCAAGAAAAAAGACTGCTCCTTCAAGAGACATCAATTTTTCCCAATGTGC CAATCTAAACTTGAcgtaaataattttaaatcatttCTTTGCCAACCGGT CCAcacaaattacacgtttttttgagaatatacatcataagaatatttat gattaaTTTGgccgaaaaataaaaatgtgctAAGAATGTCACCATCATGG TGAGGATATCATTTTCAGAgcattttaactgtaaattgccaaCCCCCCAG CAAGGCTCAATACTTTGACAAAAGTACCATTTTATTCTTCAGGTGTGTAT CACATGTTATCATTAGGTTGAATTTCGGGCTTCGCCGGAGAATGCCGTAG ATTATTTTAGGATAATATTATAGGTATTaatcataaaatgaaaaaaaaaa actatttcataaaaaaaaacgtgtagagtgATTTTAGGTGAAAGGGAAAC AGGGACCAGACAAAACATTTAAATTACGGAGAGGtctttaaaattcttaa aatttctaCCACGTTTGGCTTGAACTGAGTCTTTCGAGAATAATATACTC ATACTAAGTTGCGATATTTTCTTGATAAACATAATTAATTGATAGAGGAC ATCCTCGACTACTGTTCTGGAATGTAGCTTGATTTATTTTCCATTTGAAG TATTTGAAATACCGATGGCAAGAAACATGTTTTCGAGAGGTTCATGGTGT TGATGGTTCACAATGCTCAATACTTGAGTATTTTCAAAAGGTTAGTGAAA ACACCCTGTTCTCGTTGGAATTTAGCCATGATAGTAAAGCCATGattctt tattttatatactgatggtgAAATGAATAGCCTTGTTTGGGCtgtgagtt tgaatttcccatctCCAAATGTCAGTTGataaaagagccaatcaaagttt ttttctgagtgaaatatttttaactgttattttttgagtccaaaattttc ctcacagctcgaacccgtcctgtctcatcaaaagtatttttatttcatta ttctGATTTTTACGATGCTGATTCTGTAAAgtaaaatgatgtttttgttt agGTGGAGCCATACTGTGGATACCATGAATCGAAAATAAGAAAAGATCTT CCGGTAAAGctattttttgttgatttataTCTTAAAAACCATTGAAATTA CCTCCACGATTTTCACCGCTATCTGTAAACTTTTTtggatttaaaaaata aaatcactaATCCACTATTGTCATACAGAAAAAGAGTTCCACCTTTAGTT CTGGTATTTAGCATAGCAATTATCTGATTTTCAGTTATTCAGACCTCAGT GAAAACCAATCCAGTAGGTCATAAAGGTCTTTAAATAATTTACAATCGAT AAAATCTAACGTGTATCTTTAGGCCAAGATGAGGTTTGATTTACAAGGCT TATTGAAAATCATATCCGGTGAACAGTTTCAATGGATGAGACAACGGGCC ACAGATTCATGGCCTCACTGGGTTCAAGCTGGCaagttctttcaaaagaa aaaccaaaTATATAAAAGGAAAAAGGTACAGTAGGAAACTCACAAtgtaa gaaattaaaaaaatgctaTCAAAGTATAAACAGTTCGAGGGGCCAAtctt ttaggattatttataaAAGAGTGTACGTGAATTAGGCCCAGCTACAATCA TGGGCAAAatgttgtagacaaatgaaatttcagtgaaaaatggtgagaaa tagagcaaaatgactcttcaatgtgtctgaaaaagggggatgagctggag tttttataagatacttcactaagtggtcatttgaagtaaaagagatgacg cgttctttagaaaaagtaacaaaattgttttactacatgttaacgaccaa ccaaatcgaataagagcttgtaaaaactccagctNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA AACACTttcgaagtcgttgcattgcttttgaattgcttttgagggaacca caagcaaaaaatcagcgttttgatactggtgtaagcctgTTAATCTAGCt cttgtggttagactgcagtgggtgactttgactttagaaagcacccagaa cctcttgggaacttgtttttgatcgatattgaagtattttgcaaatattg cagaagtctacaaaccttttgtccatgattgtaaacTGTAAGGGGAAACA AGTGCTgggtagcctatactagacgtcacgatATTTTTTCTTCGCTGTAC CGTCTATAAACATGTTGCAGAATTAAAGTCTAAAGACAAAATCAttcttt tactcgaaattttgttcttgttacatgacatttatttctgattggttcga atttattgacactaataaagttatcagctctaagttgtaaagcaagtaac atgaactttttcgagtaatcacatgttttgaatgcgctgatataattttg caacccatGTATTCCCTTTTGCGGCTTTTTCGAATTTTcggagcccaggt tttcgggcatGAAATTCTGAGGAAAAAAGTAGACTACAAAATACCCTTTA CACATATGTACAAGGAAATACGGACATTTAAAGCAAAGGTCCTGTCCGAT CCAAGTGCAATCTAAACAGATTTGACGCCAATCATTCTAAAACTGACAGG CATTTCAGCTTTTCATGACTGTTCGGAAGAATTCATCGTATTGACTCGAA CAATTTTATCTAGCTTTGTTCAATGATTTGAAAATCAATTCTATTGGAGA GAAAATCTGGCCGGTGTACCGTTTGAAAAATACTAAAACGCTCGAACTCG TATATCGCGGTTTGGTACATTGAAATCTTTCCCCTAAAATTTTCTAACTC TTCCCTTTTAGATTGCGTTATTCATGGGCTCATTTGGTTTCCAACCTTTG CTTTTCAAATATGCTGGCAAGGGTGGACCATTAGGTGAATTGGTACAGTG GACGGACACGTTGTGTGGATTGTATATCCTTGGATATGACGTCAATGTTT ATCTGAATATCACCGAGATGAAGTATATATTTCCTTCATTTCATTTCGAC GAGGAAAGTTTCATAGACGAAACAAATGAATTTATAGCCCCTAAATtgaa ttttcaaggaaaaacatttttataatgtcattacatgttttttaaaaGCA AGTGTCTATCCCTTCACCAGGcttgcattatgcttagcattctattgttc ttaaacaatgAGTCATTGTATAGGAGCCAAAAACTGAACCTGTATAATGC TAATAAACGTTtatgcttttgaaaaaaaaacatggttCATTACAAGGCGG AAATGATTTGAAGTGAAATTTTTTAAGTGCCATACTATCAGAAGAAccga agatttttttctttcgagtTAAACTGAACCTTTATATTTCGAGTTGAACT GAACCTTTATACTTCTCCATCTTGTAGGTGTGGCACAACTTTAGTGGTCG AGAGGGGGAGGGGCGTTAAAATCTGCACCATTATTGTAGAAAGATATAAA ATGCCTATCATTTTTACTACTAAACAACCTAAGCAATTAATAGAAAACCA TTGAAAAccctcattttggtattttCAGCCTTCCAAAAACACAACCCGGT TATTGTGCACCGCATTGGACGGATGAAATGTTGCGTGACGAGCCGGAAGT TATTTATACCGATTCCAACGGAATGGCGTATTTCATCATGGATCTGGGCG CTGCTGCCACTGCTAAGTATAGGTAAGCAAAAAGTGATGGTGAAACTTAA TTTCGTCAATCAAGTCATGACTGTGCATTATAGAGATACCTTAAAGAAAG AATCGCCTTTTGCCGGAAAGCATCGCCTGAAATCCGCCAATTAAGTTCCC AGTAGATTTAATTTATTCCACACATTCTCCAAATTGGTGCTATTTCAGGC TTATATAGGTTTTCCTTATTTAACAGCTGTTTAAATAACAACTTTTAGCC AAAgatatcctgcaaccgccaaattaatttccctctgaaaaaactttttt cggcTATCATCTGCTGAATTAAATTTCCGCCAAAATGTCTTCCTTTTAAG GTACAGACGTCTCCGTTCTTTTAATTCGtcaattttcagtttaaaaaccc tctatttttataaaatagagagctttagcttcaaaaaaaaaatgtttatt caCAACCAAAAATTATCCTCGGGCACATAATATTGATATATTATGTtgaa taaaatgaagaaaaatatatacactAGAAATCACTTAACTTCCCCTTTAA TATCAAAGCAAAAATCTTCTTTGATCAATCTAAAATGGTCCTGGCAAGGA CGCCAAGAAAATGTTGTTTGAAGAATCTTTCACCGTTTTCTTTTACAGGT GTAGATTGCGATTGTTAGATTCCTTTGGCACATGGCCAGAGTATAATGAT CCCAGCTATCCATTCGAAATAATGGGTGGTCGTTCTCCATGGGCCAACAT GAATTTGCTGACTCAACAATTCCTAACATTGTATCGTAAGTATAATAACC GATTCCATCATTGCTATTAAGAGGGGacgtttttattaatttctttaGGA AACTTTTGTTATGATATATAATGAAAGgaatatatttttaatgttgaaaa AACATTCTGTGATTACGATCtgacaaaaagtttgaaactttGTGTGACTT TTTCCAATTCAATCAACCTATTATGCAGCTCCATTAAAGTAGATTGGGTT TTAGTTTACCGTTGTTGCCATATGTTATTAGAGTGTATATTTACAACAga agtcattgtattgaccCCAATACTAAACCTTAGAGAACTCACAGCGATCG CACCATTACAGATCAACAAACtgattttcttactttttcagCTCATACAG atgataatttatttttgggttttgtCGTCGGCAGCAAAACGATGAACGAA CTTCCTACAAATAAACCAACAGAAAAACAAGACAAAGCACTGCTTTATGC CAAGTTGCTAAGTTACTGTAAAAGCCAGGTAGGCTATTTTCTTCAAGAAT CTAATGAAGGATAACCTGCTTTTAGTCTGCTAGAAGAAGATTGGCGGAAA CTTCTTCTTTTAAACTCATTTTTAGACCTATTCGATGCTAGAATAGTACT GACCTGTGTGTTCTGAATCAAAAGACCCTCAAAACTTGCAGTAACATTGT TAGATGGCTAACGTCTGGACTCTGAAATCTTGTGATGAAATTATTTGgcc acccagctggcacacaacgttgtttcaacgtttatttaacgtttccaacg tccatataacgttagatgaacgttgaaacaacgttgtgtaccagcttgGC ACCTTTCTCTTTGAATTGCCTTTATTTACAGGAGAATCGAAAATACTTGA AAATTGTCAGTGAATATTTTCAATTGGAAGCCACGTCAGTCAAGAATGAA AACGTATGTTTTTTAAGACTCATTATCATTCACTTGTCATCATCGGTGTC ATATCCAAAAATGGTGCTTAAGGTGTACAAACTTtggcgagcagaaactt ttgcaaggacgaaaaatcgcgaaatttgcgacatttactttcgcaaaaaa ttgaggaaaaaatgttttttgcgaacaaaaactttcacgaatcgttggat aaaaatgagaatttttcaaTGAGAATTgccttaaagcttttttcacacgc aagtaaaattttactttagaccttagggaaaatcgttcgtaaggctgtct tttgggaatttccccgacattatgtagagttttttttgattgagacattt actttcgcgaaataGTCCAAAAGgctttctgctcgcgaaagtttgtacgc ctaagcTAAAGTATATTCGTTGAAATTAAAAACTACTTAACACTAATCCC AACCACTGAACTTTCAAAACCCAGTATATTAAGCTATATTCGTCTCGTAT CATCTTTGATCAGAGTGGTACACGCAAAGAAGCCATCGCACTAATAACGA CAGCTAGCTATCAGTACTTAGAAATGCTAtactctttttttcatttttca tgctTTCAGGggtttgattttttacacaacTATGGACCAGTGAGTGGCAG TAAAGTTAAAGAGCTCTTGGCCGGTGCAAAGGTTGGTAACTATTGATTGC GAGTAAAAAAATGAAAGGGCTTCGCTTTTTCTACTATGATATATATAGCT GGTAATATCGTTTAATATATAGAGCGCttggaaaaaaaagttgattatCT ATTTTTTCCAACGCTATTTGTTTTGTTCCAACGTTGGAACAACACAATCG CCTCTCATTTTCCtttgctttttggacctaccccggtggggtagaggtcc tataaattaaccgatgtccgtccgtctgtccgttcgtccgtccgtccgtt cgtccgtctgttaccagcttttctcaggattggctcattagttttttctg atttttggcacaatgatgcaaaatNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNcttttccggtcgaaaatgccggaaatatgccggaaatcgtcgtttttg cagattttcatcggactttttccttatatttcgttgttttttcacacaaa acattattaatagcaatgtccacgatcaagcatgattcaattgtcaataa aactgatattTGAAGCCGgagctttctaaaaatcgccggaacagccgatt ttcgccggaaaaacggtatttcttgaatttcttgagctgtactttatatt ttttcatgaaattttgcacactgatgcaaaatgtcaatacctaaattgtg acgaagccagagtttcgaaaaaaattcatttccggctgaaaatgccggaa atatgctggaaaaattggttttttggcattttctcgagattttatcatta gttttttctgattttttgctcaaagatgcgtattaacaatgcccaaaaca tggccgagtccgatttttgagaaaaaaaattttccggcggaaaatgcctg aaatatgccggaaatcgccgtctttctagattttcatcggactttttcct tataattggttgttttttcattcaaaaacattattattagcaatgcccac cagcaagcatgtttcaattttcaataaaactgatttttggagccggaact attttaaaagtcgccggaacaacctattttcgccggaaagacagtatttc ttgaatttctcgagctgtactttatatttttttatgaaattttgcacNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNttttttatgaaattttacacactgacgcaatatgac aatatctaaaatgtgacggagcccgattttcgaaaaacatttttttccgg ccgaaaataccggaaatatattttcttactttttcagCTCATACAGatga taatttatttttgggtttcgtCGTCGGCAGCAAAACAATGAACGAACTCC CTACAAATAAatatctaaaatgtgacggagcccgattttcgaaaaacatt tttttccggccgaaaataccggaaatatgccggaaaaaccggttttttga cattttctcgaatttttatttttagttttttctgattttttgcagaaaga tgcgtattcgcaatgctcaaaaaatggccgagttcgatatttgagaaaaa ttttttccggtcgaaaattccggaaatcgccgtttttgcagattttcatt gggttttttccatatatttctatgtttttcacacaaaaacattattgata acaacatcaagcatgattcaattgtcaataaaactgatttttgcgaccag aactttctatttattttttccctacaacccttccctctccccctaccatc aatcaatgatgaattttttttcctttttcttcttgcattgctatctaact ttcatcatcaggtaggtccattcagcatctagcttttTATTCTTTGCGTA ACAATGTGAAAATCTATTGTAGGTTTTCATCGGATGTGGCTTCCCGTATG AAGGACCGGGTCCTCTGGAAGCAATGGCTGCTGGAACACCTTTCATCCAA CCCAAGGTACAATGACATTTAAAATCACGAAATCTACAAGAAAGTTTCGA GGAGGAAATACTCTTCGCGAGCgtaaattttttaacaaaacatTAAGTTA GATGCTAACTTTGTTCCCTGCGTATCATTAGCTTCTTAATTCTTATCGAT AATAATTCTCTAGCGTTAATCAGTAACGTAACTAtcatggggacgaggtt ggttAGATGTGATGAAAATTAATTTACTTTCATGAAAAATTCTGTTCGTG AAAATTTGTACGCTGCAAATTCATCTTTTCGAGTTCTCTTCGGTAAGAAA TATTAACCCGCTCCCTCTATGACACCATCTCATTTGCTTGATTTTTTAGT ATCCAGTCCCtaagaataaagaaaatgacGAGTTTTTCAAACTGAAACCG AATTTAAGAAGGGTAAGTTTGTTTTAttctcatttcaatttttttgataa acttcATGGGCGCGATTGAGGTGGTCCAGACGTATCATACTAGCCATCTT TGTTTGCTTTACTTAAGCAAATTCCCAAATTGGGCTAATccagaaaaaca ttttaatatgggagtggaggatataatttttggaaatctaCCCCTCCCTG AACAcggtgacttttgacccccttTCCCGGACAGCTGGTCTAACCCCCTC CCCCAAACAAGCATCGGTTCACCCCAGGAGAGTTAGAATTACCCCAAAAC AAAGCAAGTTTACAAggcaaattttttagatttttcactacccacAGAGa atatatcctccatccccgTGTATGAACATTTCTCGGAACGATTTTTATCA TTACCAGCTAACCTCGCAAAGCCCATACATGGAAGATTTCGTTGGTGAGC CATATGTGTATACCATTGATATCACGAATGAATCGTTGTTGAGATCAGTT CttcaaaagattaaaaatatgAAGGTAACAATTTTTAATACTCGAAGATG GCCATTATCTACAAGTTACGTTacgtaaaagatttttttactttctagtt ttgttgattttatagCAACTTTTGAGAGACATTTCGCGTTTTTGGTTTGG ACCACATTTCAAATAGACTGATTGTCAGTGAAATAAAAATCTGGTAAATC TTTCTATGCCCAACGTTGGCCCTTTTTTCCATGAATATAGTATGTGGATA AATAATTGCCAGCTTTACTCGATAACACTCCAGTATAAAGGACTTTCGAT ACCCAGGCTCCTACAGTTTAAGCCTGTTTAAGtttaattttggattttta tattttttgcagCCATTACCACCTAAAATCCCCAAAGAATTNctgaattt tggatttttattttttttgtagcCATTACCACCAAAAATCCCCAAAGAAT TCACAAATGAAGGAATGATGGAACGACTTCACATTTTCACTGAGCACATG GTATGTTAAAGTAGTTAGCTCTGAATAGGTACTAGGGTTTAAAGTTTGAC GACACTGCAAAAATATTGCGAAAGTTTCAGGATTCCAGAGGGTGTCGAAA ATTATACTCGAGTTTTTGGTATCTgctctcaacttcagttgagctagaat ctgacatgTCTGTGTAGAattcggctgaaattttgcacatttgttccttg ggtgaatatcagggggtgtttttttcattttttcgaaattttcattttaa ggtCACAATTGTGAGGTTTAGCCCAAAACGAAGCTAAAACAtttcttata taaaagattttctgttgATGCTTACAATTTGGCCTACGAGTAAtttaaaa gatactgaagttgagccagtgcggttaccACGTTCGACAGTTTTCAAGCA TTGGGTCTGTTTCGATCCAACTTTACCAAATATACTTCCTTCCCGGCACA ATCCAAGCCATTTTTTCCTCCTTTCTGCGTAAGACACATCAAGAAACATC CTTCATGCAGGAGTATTTTCACGGTTCTTAATACATGgtgtcaccccccc ccccccttaaagggggggggggggggcccccagTTACTAAAACCGGGAAA AAAACCCCCCAAGCCGGGGGATTTTTCGCGGTTCTTAAAtttagtgcccc ccccccccccccactttaagtgggggtacctaaaaaaaaaggtgttaaaa aagccaggtacctggaagtattcacactttcagggggtacctgatatgtt tggggggACCTGTAATCTCGTCAGTGAGGGTGGGGGCTGTTTTTTCTGTG TGGGatatttttcttaactttactcaatttctcaattttcaacCAAACCC TTCGTTTTTactactttttctttctttgagtCCTTTACATTTTACAGTAA CCCCAGTGAAGGAGATTaaaattaaacgatttttttgtttttgttttttt ttataaatagaaatttGTAGTTTGCCCACGGACGTGGAGTGGTTcaattt gaataaataaataaataaataaataacgaTATTGCATTTTTGCTGACCAA GCGTTTCTATCATAACAAACATGGTAGCTTGAAGTTGTTATATTTTTTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAATCCTGGGGG CTACCTAAGAATCCAAACAactttgggggtacctaaatcgTTGGGGGTAC CTAATTTTATTGGGGGTACCTGAAGCCTGGAGGACCCTATGTACCaatga aatatatattttctcaaCAGGACTTTTGTCATGCATCAAAACCGCGATGG CCACCACTAAGTCATCGAGAAGTTTTTGCGGcagaaaaatcaacttcttg ttcAGAGACTTGCCGAAAACATGGTATGAAATACATTATCACAATTATTT GTTGACCTTAATTAATATTTCATTTGGGTTCTAATTTTCTATAAACATTC AACTCTTTttaatttgctttttttttagatttttaaggGATTTTTGAAGA TTGGAGTTGGAGATCTTTTGTCAATTTGGAATGTTCtaccaatttttgaa atatttagagGCAGTTTTCGAGGAaatctattttcattttatcctcTTTC TCCTTCAGGTCTAGTTTGCGAGAAGAGTTATTTCGACGAATTGAACGTTG CTTCAGAAATTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036452XLOC_036452Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057822-exon-scaffold_299-1491911889:29022..29214TCONS_00057822-exon-scaffold_299-1491911889:29022..29214Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:29022..29214TCONS_00057822-exon-scaffold_299-1510915933:29022..29214Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:29022..29214TCONS_00057822-exon-scaffold_299-1575043694:29022..29214Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:29526..29686TCONS_00057822-exon-scaffold_299-1491911889:29526..29686Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:29526..29686TCONS_00057822-exon-scaffold_299-1510915933:29526..29686Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:29526..29686TCONS_00057822-exon-scaffold_299-1575043694:29526..29686Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:30272..30361TCONS_00057822-exon-scaffold_299-1491911889:30272..30361Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:30272..30361TCONS_00057822-exon-scaffold_299-1510915933:30272..30361Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:30272..30361TCONS_00057822-exon-scaffold_299-1575043694:30272..30361Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:30674..30724TCONS_00057822-exon-scaffold_299-1491911889:30674..30724Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:30674..30724TCONS_00057822-exon-scaffold_299-1510915933:30674..30724Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:30674..30724TCONS_00057822-exon-scaffold_299-1575043694:30674..30724Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:30994..31146TCONS_00057822-exon-scaffold_299-1491911889:30994..31146Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:30994..31146TCONS_00057822-exon-scaffold_299-1510915933:30994..31146Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:30994..31146TCONS_00057822-exon-scaffold_299-1575043694:30994..31146Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:32583..32743TCONS_00057822-exon-scaffold_299-1491911889:32583..32743Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:32583..32743TCONS_00057822-exon-scaffold_299-1510915933:32583..32743Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:32583..32743TCONS_00057822-exon-scaffold_299-1575043694:32583..32743Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:33300..33443TCONS_00057822-exon-scaffold_299-1491911889:33300..33443Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:33300..33443TCONS_00057822-exon-scaffold_299-1510915933:33300..33443Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:33300..33443TCONS_00057822-exon-scaffold_299-1575043694:33300..33443Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:34070..34206TCONS_00057822-exon-scaffold_299-1491911889:34070..34206Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:34070..34206TCONS_00057822-exon-scaffold_299-1510915933:34070..34206Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:34070..34206TCONS_00057822-exon-scaffold_299-1575043694:34070..34206Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:34563..34699TCONS_00057822-exon-scaffold_299-1491911889:34563..34699Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:34563..34699TCONS_00057822-exon-scaffold_299-1510915933:34563..34699Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:34563..34699TCONS_00057822-exon-scaffold_299-1575043694:34563..34699Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:35053..35124TCONS_00057822-exon-scaffold_299-1491911889:35053..35124Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:35053..35124TCONS_00057822-exon-scaffold_299-1510915933:35053..35124Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:35053..35124TCONS_00057822-exon-scaffold_299-1575043694:35053..35124Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:35731..35802TCONS_00057822-exon-scaffold_299-1491911889:35731..35802Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:35731..35802TCONS_00057822-exon-scaffold_299-1510915933:35731..35802Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:35731..35802TCONS_00057822-exon-scaffold_299-1575043694:35731..35802Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:38044..38127TCONS_00057822-exon-scaffold_299-1491911889:38044..38127Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:38044..38127TCONS_00057822-exon-scaffold_299-1510915933:38044..38127Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:38044..38127TCONS_00057822-exon-scaffold_299-1575043694:38044..38127Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:38471..38533TCONS_00057822-exon-scaffold_299-1491911889:38471..38533Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:38471..38533TCONS_00057822-exon-scaffold_299-1510915933:38471..38533Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:38471..38533TCONS_00057822-exon-scaffold_299-1575043694:38471..38533Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:38929..39045TCONS_00057822-exon-scaffold_299-1491911889:38929..39045Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:38929..39045TCONS_00057822-exon-scaffold_299-1510915933:38929..39045Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:38929..39045TCONS_00057822-exon-scaffold_299-1575043694:38929..39045Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:39444..39521TCONS_00057822-exon-scaffold_299-1491911889:39444..39521Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:39444..39521TCONS_00057822-exon-scaffold_299-1510915933:39444..39521Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:39444..39521TCONS_00057822-exon-scaffold_299-1575043694:39444..39521Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:41242..41344TCONS_00057822-exon-scaffold_299-1491911889:41242..41344Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:41242..41344TCONS_00057822-exon-scaffold_299-1510915933:41242..41344Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:41242..41344TCONS_00057822-exon-scaffold_299-1575043694:41242..41344Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1491911889:41580..41635TCONS_00057822-exon-scaffold_299-1491911889:41580..41635Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1510915933:41580..41635TCONS_00057822-exon-scaffold_299-1510915933:41580..41635Clytia hemisphaericaexon
TCONS_00057822-exon-scaffold_299-1575043694:41580..41635TCONS_00057822-exon-scaffold_299-1575043694:41580..41635Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_299supercontigscaffold_299:29022..41635 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.533339 0.596488 0.227376 0.283582 3.53263 2.51491 10.473 11.6746 6.13698 6.48894 7.83587 3.44965 1.58869 1.6783 3.00652 3.37656 3.65415 4.34381 2.61943 3.15727 2.09538 2.96917 1.23464 1.85058 1.57581 1.66711 2.08703 1.43503 1.07841 1.03735
Blast
BLAST of TCONS_00057822 vs. Swiss-Prot (Human)
Match: MGT5A (Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT5 PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 3.045e-109
Identity = 209/556 (37.59%), Postives = 319/556 (57.37%), Query Frame = 1
Query:  256 KYDIKEKLNGTPKKKDCSFKRHQFFPMCQSKLDYLKYRWQ-ETCFREVHGVDGSQCSILEYFQKVEPYCGY--------HESKIRKDLPAKMRFDLQGLLKIISG-EQFQWMRQRATDSWPHWVQAGKFFQKKNQIYKRKK------IALFMGSFGFQPLLFKYAGKGGPLGELVQWTDTLCGLYILGYDVNVYLNITEMN-LPKTQPG--YCAPHWTDEMLRDEPEVIYTDSNGMAYFIMDLGAAATAKYRCRLRLLDSFGTWPEYNDPSYPFEIMGGRSPWANMNLLTQQFLTLYPHTDDNLFLGFVVGSKTMNELPTNKPTE--KQDKALLYAKLLSYCKSQENRKYLKIVSEYFQLEAT--SVKNENGFDFLHNYGPVSGSKVKELLAGAKVFIGCGFPYEGPGPLEAMAAGTPFIQPKYPVPKNKENDEFFKLKPNLRRLTSQSPYMEDFVGEPYVYTIDITNESLLRSVLQKIKNMKPLPPKIPKEFTNEGMMERLHIFTEHMDFCHASKPRWPPLSHREVFAAEKSTSCSETCRKHGLVCEKSYFDELN 1854
            K ++ + +NG  +K  C       +P C+ K+ ++K  W+ + C+ + +GVDGS CS   Y  +VE +C +        +E      L A++R D   L  ++   E+F+WMR R       W+QA K   +K  + KRK+      + L     GF+  + + A  GGPLGELVQW+D +  LY+LG+D+ +  ++ E+  + K   G     P   D ++    E+IY D  G+A F   LG +    Y+C LR+LDSFGT PE+N  +Y  +  G ++PW   NL  QQF T++PHT DN FLGFVV  + +N    +   E  +Q+++L+Y K+ S+ K++  + YL I+  Y ++ AT      +N   ++ N+G +SG  ++ LL   K+F+G GFPYEGP PLEA+A G  F+ PK+  PK+ +N +FF  KP LR LTSQ PY E F+G P+V+T+D+ N+  +   ++ I N K + P +P EFT EGM++R++ F E  DFCH  +  WPPLS  +V  AE   SC + C++  L+CE S+F  LN
Sbjct:  131 KINVADIINGAQEK--CVLPPMDGYPHCEGKIKWMKDMWRSDPCYAD-YGVDGSTCSFFIYLSEVENWCPHLPWRAKNPYEEADHNSL-AEIRTDFNILYSMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKVLVHLGLLTKESGFK--IAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKKVVGNRSGCPTVGDRIV----ELIYIDIVGLAQFKKTLGPSWV-HYQCMLRVLDSFGTEPEFNHANYA-QSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVV-EQHLNSSDIHHINEIKRQNQSLVYGKVDSFWKNK--KIYLDIIHTYMEVHATVYGSSTKNIPSYVKNHGILSGRDLQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVWTVDLNNQEEVEDAVKAILNQK-IEPYMPYEFTCEGMLQRINAFIEKQDFCHG-QVMWPPLSALQVKLAEPGQSCKQVCQESQLICEPSFFQHLN 669          
The following BLAST results are available for this feature:
BLAST of TCONS_00057822 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT5A3.045e-10937.59Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylgluc... [more]
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